View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8558_low_4 (Length: 383)

Name: NF8558_low_4
Description: NF8558
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8558_low_4
NF8558_low_4
[»] chr2 (21 HSPs)
chr2 (11-379)||(19243808-19244176)
chr2 (312-379)||(34041597-34041664)
chr2 (312-379)||(37480075-37480142)
chr2 (312-379)||(42327404-42327471)
chr2 (312-375)||(4438992-4439055)
chr2 (323-378)||(12994386-12994441)
chr2 (312-379)||(29503271-29503338)
chr2 (312-376)||(42602554-42602618)
chr2 (312-383)||(5147684-5147755)
chr2 (312-367)||(28846691-28846746)
chr2 (312-379)||(39714992-39715059)
chr2 (312-379)||(40416399-40416466)
chr2 (312-382)||(1729816-1729886)
chr2 (308-378)||(19016027-19016097)
chr2 (312-377)||(19322768-19322833)
chr2 (312-379)||(42922414-42922482)
chr2 (313-376)||(16918590-16918653)
chr2 (312-379)||(30808656-30808723)
chr2 (312-383)||(35916086-35916157)
chr2 (333-367)||(24191859-24191893)
chr2 (333-377)||(12086140-12086184)
[»] chr4 (24 HSPs)
chr4 (16-172)||(51596479-51596637)
chr4 (312-383)||(31759663-31759734)
chr4 (312-379)||(37109360-37109427)
chr4 (312-383)||(46545711-46545782)
chr4 (312-383)||(1730494-1730565)
chr4 (315-379)||(7292807-7292871)
chr4 (311-379)||(39509069-39509137)
chr4 (336-379)||(4483310-4483353)
chr4 (312-379)||(5795418-5795485)
chr4 (312-379)||(7949463-7949530)
chr4 (333-376)||(11592165-11592208)
chr4 (336-379)||(23377980-23378023)
chr4 (312-379)||(24827825-24827892)
chr4 (312-379)||(47044717-47044784)
chr4 (333-379)||(38869789-38869835)
chr4 (312-377)||(19238588-19238653)
chr4 (337-378)||(21404831-21404872)
chr4 (312-376)||(37274471-37274536)
chr4 (323-383)||(306315-306375)
chr4 (311-383)||(12821967-12822039)
chr4 (315-375)||(20281205-20281265)
chr4 (323-367)||(52254425-52254469)
chr4 (334-382)||(53496899-53496947)
chr4 (311-379)||(55427209-55427277)
[»] chr8 (21 HSPs)
chr8 (312-379)||(19703496-19703563)
chr8 (314-379)||(2203494-2203559)
chr8 (311-368)||(20994478-20994535)
chr8 (312-379)||(16852340-16852407)
chr8 (314-379)||(3624582-3624647)
chr8 (312-379)||(18540298-18540365)
chr8 (312-379)||(44780123-44780190)
chr8 (333-383)||(12281515-12281565)
chr8 (312-378)||(18897166-18897232)
chr8 (322-379)||(18546371-18546428)
chr8 (311-379)||(8059631-8059699)
chr8 (311-379)||(26688864-26688932)
chr8 (312-379)||(968362-968429)
chr8 (312-379)||(5264544-5264611)
chr8 (312-383)||(6436560-6436631)
chr8 (312-379)||(23361658-23361725)
chr8 (333-379)||(6536541-6536587)
chr8 (312-366)||(17727448-17727502)
chr8 (312-378)||(28783060-28783126)
chr8 (312-376)||(11793533-11793597)
chr8 (315-359)||(25058670-25058714)
[»] chr7 (33 HSPs)
chr7 (312-379)||(22760863-22760930)
chr7 (312-379)||(26459419-26459486)
chr7 (312-379)||(43215184-43215251)
chr7 (312-378)||(23552118-23552184)
chr7 (312-379)||(25655237-25655304)
chr7 (312-378)||(25021345-25021411)
chr7 (311-379)||(20335840-20335908)
chr7 (312-379)||(7801180-7801247)
chr7 (312-379)||(17041021-17041088)
chr7 (320-367)||(36803648-36803695)
chr7 (312-379)||(39631844-39631911)
chr7 (312-379)||(42836010-42836077)
chr7 (333-378)||(3280495-3280540)
chr7 (333-374)||(27445017-27445058)
chr7 (333-374)||(27454744-27454785)
chr7 (338-383)||(42262100-42262145)
chr7 (307-367)||(2446303-2446363)
chr7 (312-376)||(5273602-5273666)
chr7 (311-367)||(23301623-23301679)
chr7 (312-376)||(30442488-30442552)
chr7 (323-378)||(21877819-21877874)
chr7 (320-379)||(41519273-41519332)
chr7 (320-379)||(45709717-45709776)
chr7 (333-379)||(3968651-3968697)
chr7 (333-379)||(14058274-14058320)
chr7 (333-379)||(14368302-14368348)
chr7 (333-383)||(36877219-36877269)
chr7 (312-366)||(39499741-39499795)
chr7 (322-379)||(2962469-2962526)
chr7 (335-379)||(21558151-21558195)
chr7 (312-383)||(33460427-33460499)
chr7 (312-376)||(38374611-38374675)
chr7 (315-367)||(45976944-45976996)
[»] chr5 (19 HSPs)
chr5 (312-378)||(30883208-30883274)
chr5 (312-376)||(34984806-34984870)
chr5 (312-379)||(16773807-16773874)
chr5 (308-367)||(21549158-21549217)
chr5 (312-379)||(22737082-22737149)
chr5 (320-382)||(14495811-14495873)
chr5 (320-379)||(892483-892542)
chr5 (312-379)||(25627057-25627124)
chr5 (312-379)||(87432-87499)
chr5 (320-379)||(1410668-1410727)
chr5 (312-367)||(8278296-8278351)
chr5 (312-379)||(14285161-14285228)
chr5 (312-379)||(40461622-40461689)
chr5 (320-378)||(16436626-16436683)
chr5 (312-378)||(16457810-16457876)
chr5 (312-366)||(26598524-26598578)
chr5 (333-379)||(37148047-37148093)
chr5 (322-367)||(18437095-18437140)
chr5 (320-379)||(17155832-17155889)
[»] chr6 (11 HSPs)
chr6 (320-379)||(34444811-34444870)
chr6 (312-379)||(33549104-33549171)
chr6 (312-374)||(12188317-12188379)
chr6 (312-379)||(31623000-31623067)
chr6 (320-367)||(3968215-3968262)
chr6 (333-379)||(6385883-6385929)
chr6 (333-379)||(10338183-10338229)
chr6 (341-379)||(23910120-23910158)
chr6 (333-383)||(28363958-28364008)
chr6 (311-383)||(3779338-3779410)
chr6 (312-364)||(12234531-12234583)
[»] scaffold0258 (1 HSPs)
scaffold0258 (311-379)||(15332-15400)
[»] chr1 (25 HSPs)
chr1 (312-376)||(25297772-25297836)
chr1 (312-379)||(9165204-9165271)
chr1 (320-383)||(10526831-10526894)
chr1 (312-383)||(27567127-27567198)
chr1 (312-379)||(51814494-51814561)
chr1 (313-382)||(44126396-44126465)
chr1 (315-379)||(15786329-15786393)
chr1 (312-376)||(31794276-31794340)
chr1 (312-376)||(36371470-36371534)
chr1 (312-383)||(1094525-1094596)
chr1 (312-378)||(8904414-8904480)
chr1 (320-378)||(17745266-17745324)
chr1 (333-367)||(36124854-36124888)
chr1 (314-379)||(33700782-33700847)
chr1 (322-383)||(42787218-42787279)
chr1 (320-376)||(11063564-11063620)
chr1 (311-379)||(16169987-16170055)
chr1 (311-379)||(19528336-19528404)
chr1 (312-379)||(4566548-4566615)
chr1 (320-378)||(37400282-37400340)
chr1 (312-378)||(40257399-40257465)
chr1 (312-382)||(41508831-41508901)
chr1 (311-379)||(952510-952578)
chr1 (323-379)||(8177191-8177247)
chr1 (312-383)||(50901581-50901653)
[»] chr3 (25 HSPs)
chr3 (312-379)||(14186648-14186714)
chr3 (312-379)||(30311306-30311373)
chr3 (333-383)||(21960572-21960622)
chr3 (311-379)||(16354901-16354969)
chr3 (323-383)||(32651443-32651503)
chr3 (315-379)||(53412948-53413012)
chr3 (320-379)||(4844520-4844579)
chr3 (320-379)||(4870216-4870275)
chr3 (312-379)||(27093370-27093437)
chr3 (312-379)||(37788474-37788541)
chr3 (333-378)||(39976441-39976486)
chr3 (312-376)||(5499419-5499483)
chr3 (312-379)||(11642218-11642285)
chr3 (320-367)||(12761520-12761567)
chr3 (320-383)||(34928946-34929009)
chr3 (312-379)||(46518628-46518695)
chr3 (317-379)||(11612304-11612366)
chr3 (336-365)||(26411569-26411598)
chr3 (312-377)||(47810755-47810820)
chr3 (312-376)||(4222141-4222205)
chr3 (312-379)||(10445148-10445216)
chr3 (343-379)||(20501727-20501763)
chr3 (315-367)||(28928900-28928952)
chr3 (311-367)||(31788991-31789047)
chr3 (323-367)||(45699949-45699993)
[»] scaffold0002 (1 HSPs)
scaffold0002 (315-379)||(94980-95044)
[»] scaffold0211 (1 HSPs)
scaffold0211 (310-366)||(24051-24107)
[»] scaffold0006 (1 HSPs)
scaffold0006 (320-376)||(163021-163077)
[»] scaffold0517 (1 HSPs)
scaffold0517 (320-378)||(7736-7794)
[»] scaffold0180 (1 HSPs)
scaffold0180 (323-379)||(19971-20027)


Alignment Details
Target: chr2 (Bit Score: 345; Significance: 0; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 345; E-Value: 0
Query Start/End: Original strand, 11 - 379
Target Start/End: Original strand, 19243808 - 19244176
Alignment:
Q  11 atatcaaagctgtgaggacattttgcagtcacatgcatttttctcttggtgctggttgtagcgaagctgcaggacctattggaagagttcttgaagcaga 110  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  19243808 atatcaaagccgtgaggacattttgcagtcacatgcatttttctcttggtgctggttgtagcgctgctgcaggacctattggaagagttcttgaagcaga 19243907  T
Q  111 cattcgtgctggtgacagaggttcttgcatgtgttatagttacagttgcagtataggtagtttgccgtaaaactttgtttcttatctcttaaacttcttt 210  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  19243908 cattcgtgctggtgacagaggttcttgcatgtgttatacttacagttgcagtaaaggtagtttgccgtaaaactttgtttcttatctcttaaacttcttt 19244007  T
Q  211 tggatgaattgaaatgacaagaacatttgttgtgcaagattcatttagttacataaccattaggcaattttgtgccatgttaataatattcatactatgg 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19244008 tggatgaattgaaatgacaagaacatttgttgtgcaagattcatttagttacataaccattaggcaattttgtgccatgttaataatattcatactatgg 19244107  T
Q  311 caacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19244108 caacccacttgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 19244176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 312 - 379
Target Start/End: Complemental strand, 34041664 - 34041597
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||| |||||||| ||| |||||||||||| ||| |||||||||||||||||| |||||||||||    
T  34041664 aacccacttgggttggcctagtggtattgacttaggatctgagagtgtgctcctcctcaaggtctcag 34041597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 312 - 379
Target Start/End: Original strand, 37480075 - 37480142
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||| |||||||| ||  |||||||| |||||||||||||||||||||||||| |||||||||||    
T  37480075 aacccacttgggttggcctggtggtattggcttgggacctgagagtgtgctcctcctcaaggtctcag 37480142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 312 - 379
Target Start/End: Complemental strand, 42327471 - 42327404
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||| |||||||| ||| |||||||| ||||||||||| |||||||||||||| |||||||||||    
T  42327471 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcag 42327404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 312 - 375
Target Start/End: Complemental strand, 4439055 - 4438992
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtc 375  Q
    ||||||| |||||||| ||| ||||||| |||||||| |||||||||||||||||| |||||||    
T  4439055 aacccacttgggttggcctaatggtattaacttgggatctgagagtgtgctcctcctcaaggtc 4438992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 323 - 378
Target Start/End: Complemental strand, 12994441 - 12994386
Alignment:
Q  323 gttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctca 378  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||  |||||||||    
T  12994441 gttggtctagtggtattgacttgggacctgggagtgtgctcctccttaaggtctca 12994386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 312 - 379
Target Start/End: Original strand, 29503271 - 29503338
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||| |||||||| ||| ||||||||  |||||||||| |||||||||||||| |||||||||||    
T  29503271 aacccacttgggttggcctagtggtattggtttgggacctgggagtgtgctcctcctcaaggtctcag 29503338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 312 - 376
Target Start/End: Original strand, 42602554 - 42602618
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtct 376  Q
    ||||||| |||||||| ||| |||||||| ||||||||||| |||||||||||| | ||||||||    
T  42602554 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctccttctcaaggtct 42602618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 383
Target Start/End: Complemental strand, 5147755 - 5147684
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcagattc 383  Q
    ||||||| |||||||||||| ||||||||||||| || ||| |||| ||||||| | ||||||||| |||||    
T  5147755 aacccacttgggttggtctagtggtattgacttgagatctgggagtatgctccttctcaaggtctcggattc 5147684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 367
Target Start/End: Original strand, 28846691 - 28846746
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctcc 367  Q
    ||||||| | ||||| |||| |||||||||||||||||||| ||||||||||||||    
T  28846691 aacccacttaggttgatctagtggtattgacttgggacctgggagtgtgctcctcc 28846746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 379
Target Start/End: Original strand, 39714992 - 39715059
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||| ||||||||  |  |||||||||||||||||||| |||||||||||||| | |||||||||    
T  39714992 aacccacttgggttggcatggtggtattgacttgggacctgggagtgtgctcctcctcgaggtctcag 39715059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 379
Target Start/End: Complemental strand, 40416466 - 40416399
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||| |||||||| ||| |||||||||||||| ||||| |||| |||||||||  ||||||||||    
T  40416466 aacccacttgggttggcctagtggtattgacttggaacctgggagtatgctcctccttaaggtctcag 40416399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 312 - 382
Target Start/End: Original strand, 1729816 - 1729886
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcagatt 382  Q
    ||||||| |||||||| ||| |||||||| |||||||| || |||||||||||||| | |||||| |||||    
T  1729816 aacccacttgggttgggctagtggtattggcttgggacttgggagtgtgctcctcctctaggtcttagatt 1729886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 378
Target Start/End: Original strand, 19016027 - 19016097
Alignment:
Q  308 tggcaacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctca 378  Q
    ||||||||||| |||||||||||  |||||||| |||| ||| || |||||||||||||| | ||||||||    
T  19016027 tggcaacccacttgggttggtctgatggtattggcttgagacttgggagtgtgctcctcctcgaggtctca 19016097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 312 - 377
Target Start/End: Original strand, 19322768 - 19322833
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctc 377  Q
    ||||||| ||||||| |||| ||||||||  |||||||||| |||||||||||||  |||||||||    
T  19322768 aacccacttgggttgatctagtggtattggtttgggacctgggagtgtgctcctcttcaaggtctc 19322833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 379
Target Start/End: Original strand, 42922414 - 42922482
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctcc-ccaaggtctcag 379  Q
    ||||||| |||||||| ||| |||||||| ||||| ||||| |||||||||||||| | ||||||||||    
T  42922414 aacccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaaggtctcag 42922482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 376
Target Start/End: Complemental strand, 16918653 - 16918590
Alignment:
Q  313 acccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtct 376  Q
    |||||| |||||||| ||| ||||||||  |||||| ||| |||||||||||||| ||||||||    
T  16918653 acccacttgggttggcctagtggtattggtttgggatctgggagtgtgctcctcctcaaggtct 16918590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 312 - 379
Target Start/End: Complemental strand, 30808723 - 30808656
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||| |||||||||||  || ||||| |||| ||||||||| | ||||||||| |||||||||||    
T  30808723 aacccacttgggttggtctggtgatattggcttgagacctgagaatatgctcctcctcaaggtctcag 30808656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 312 - 383
Target Start/End: Original strand, 35916086 - 35916157
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcagattc 383  Q
    ||||||| |||||||||||  ||||||||||||| ||  | |||||||| |||||| |||| ||||||||||    
T  35916086 aacccacttgggttggtctggtggtattgacttgagatttaagagtgtgttcctcctcaagatctcagattc 35916157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 333 - 367
Target Start/End: Original strand, 24191859 - 24191893
Alignment:
Q  333 tggtattgacttgggacctgagagtgtgctcctcc 367  Q
    |||||||| ||||||||||||||||||||||||||    
T  24191859 tggtattggcttgggacctgagagtgtgctcctcc 24191893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 333 - 377
Target Start/End: Complemental strand, 12086184 - 12086140
Alignment:
Q  333 tggtattgacttgggacctgagagtgtgctcctccccaaggtctc 377  Q
    |||||||| |||||||||||  ||||||||||||| |||||||||    
T  12086184 tggtattggcttgggacctggaagtgtgctcctcctcaaggtctc 12086140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 4e-20; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 16 - 172
Target Start/End: Complemental strand, 51596637 - 51596479
Alignment:
Q  16 aaagctgtgaggacattttgcagtcacatgcatttttctcttggtgctggttgtagcgaagctgcaggacctattggaagagttcttgaagcagacattc 115  Q
    ||||| |||| |||||| ||||||| |||||||||||||||||| ||||||||||| |  || ||||| ||| |||| ||||| ||||| |||||  |||    
T  51596637 aaagccgtgaagacattctgcagtcgcatgcatttttctcttggggctggttgtagtgctgcagcagggcctgttgggagagtgcttgaggcagatcttc 51596538  T
Q  116 gtgctggtgac-agaggttcttgcatgtgttatagttacagttgc-agtataggtagtt 172  Q
    |||| |||||| || || ||| |||||||||| | |||||||||| |||| ||||||||    
T  51596537 gtgccggtgacgaggggctctggcatgtgttacacttacagttgcaagtaaaggtagtt 51596479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 312 - 383
Target Start/End: Complemental strand, 31759734 - 31759663
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcagattc 383  Q
    ||||||| ||||||| |||| |||||||| |||||||| || |||||||||||||| |||||||||||||||    
T  31759734 aacccacttgggttgatctagtggtattggcttgggacttgggagtgtgctcctcctcaaggtctcagattc 31759663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 312 - 379
Target Start/End: Complemental strand, 37109427 - 37109360
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||| |||||||| ||| |||||||| ||||||||||| |||||||||||||| |||||||||||    
T  37109427 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcag 37109360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 312 - 383
Target Start/End: Original strand, 46545711 - 46545782
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcagattc 383  Q
    ||||||| |||||||| ||| |||||||| |||| ||||||||||||||||||||| |||| ||||||||||    
T  46545711 aacccacttgggttggcctagtggtattggcttgagacctgagagtgtgctcctcctcaagatctcagattc 46545782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 312 - 383
Target Start/End: Complemental strand, 1730565 - 1730494
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcagattc 383  Q
    ||||||| |||||||  ||| |||||||| |||||||||||||||||||||||||  ||| |||||||||||    
T  1730565 aacccacttgggttgacctagtggtattggcttgggacctgagagtgtgctcctcttcaaagtctcagattc 1730494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 315 - 379
Target Start/End: Complemental strand, 7292871 - 7292807
Alignment:
Q  315 ccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    |||| |||||||||||| |||||||| ||||| ||||| |||||||||||||| ||| |||||||    
T  7292871 ccacttgggttggtctagtggtattggcttggaacctgggagtgtgctcctcctcaaagtctcag 7292807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 379
Target Start/End: Original strand, 39509069 - 39509137
Alignment:
Q  311 caacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    |||||||| |||||||||||  ||||| || ||||||| ||| |||||||||||||| | |||||||||    
T  39509069 caacccacttgggttggtctcatggtaatggcttgggatctgggagtgtgctcctcctcgaggtctcag 39509137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 336 - 379
Target Start/End: Complemental strand, 4483353 - 4483310
Alignment:
Q  336 tattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    |||||||||||||||||||||| || |||||| |||||||||||    
T  4483353 tattgacttgggacctgagagtctgatcctcctcaaggtctcag 4483310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 312 - 379
Target Start/End: Complemental strand, 5795485 - 5795418
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||| |||||||||||  |||| ||||||||| ||||  |||| ||||||||| |||||||||||    
T  5795485 aacccacttgggttggtctggtggtgttgacttggcaccttggagtatgctcctcctcaaggtctcag 5795418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 312 - 379
Target Start/End: Complemental strand, 7949530 - 7949463
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||| |||| ||| |||  ||||||| ||||||||||  |||||||||||||| |||||||||||    
T  7949530 aacccacttgggctggcctagcggtattggcttgggacctcggagtgtgctcctcctcaaggtctcag 7949463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 333 - 376
Target Start/End: Complemental strand, 11592208 - 11592165
Alignment:
Q  333 tggtattgacttgggacctgagagtgtgctcctccccaaggtct 376  Q
    |||||||| |||||||||||||||||||||||||| | ||||||    
T  11592208 tggtattgccttgggacctgagagtgtgctcctcctccaggtct 11592165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 336 - 379
Target Start/End: Original strand, 23377980 - 23378023
Alignment:
Q  336 tattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||| ||||||||||| |||||||||||||| |||||||||||    
T  23377980 tattggcttgggacctgggagtgtgctcctcctcaaggtctcag 23378023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 312 - 379
Target Start/End: Original strand, 24827825 - 24827892
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||| | ||||||||   |||||||||||||||||||| ||||| |||||||| | |||||||||    
T  24827825 aacccactttggttggtccggtggtattgacttgggacctgggagtgcgctcctcctcgaggtctcag 24827892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 312 - 379
Target Start/End: Original strand, 47044717 - 47044784
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||| ||| |||| ||  |||||||||||||||| |||||||| ||||||||| | |||||||||    
T  47044717 aacccacttggattggcctggtggtattgacttgggatctgagagtttgctcctcctcgaggtctcag 47044784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 333 - 379
Target Start/End: Original strand, 38869789 - 38869835
Alignment:
Q  333 tggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    |||||||| ||||||| ||| |||||||||||||| |||||||||||    
T  38869789 tggtattggcttgggatctgggagtgtgctcctcctcaaggtctcag 38869835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 377
Target Start/End: Complemental strand, 19238653 - 19238588
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctc 377  Q
    ||||||| |||||||| ||  |||||||| |||||||| || |||||||||||||| | |||||||    
T  19238653 aacccacttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcgaggtctc 19238588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 378
Target Start/End: Complemental strand, 21404872 - 21404831
Alignment:
Q  337 attgacttgggacctgagagtgtgctcctccccaaggtctca 378  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||    
T  21404872 attgacttgagacctgagagtatgctcctcctcaaggtctca 21404831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 376
Target Start/End: Complemental strand, 37274536 - 37274471
Alignment:
Q  312 aacccacctgggttggtctactggta-ttgacttgggacctgagagtgtgctcctccccaaggtct 376  Q
    ||||||| |||||||| ||| | ||| ||| ||||||||||| |||||||||||||| ||||||||    
T  37274536 aacccacttgggttggcctagtcgtaattggcttgggacctgggagtgtgctcctcctcaaggtct 37274471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 383
Target Start/End: Complemental strand, 306375 - 306315
Alignment:
Q  323 gttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcagattc 383  Q
    ||||||||| ||||||||| |||||| ||||||||||| |||||   || |||||||||||    
T  306375 gttggtctagtggtattgatttgggatctgagagtgtgatcctctttaaagtctcagattc 306315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 383
Target Start/End: Original strand, 12821967 - 12822039
Alignment:
Q  311 caacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcagattc 383  Q
    ||||||||  |||||||| |  || ||||||||||||| ||| ||||||||||||   |||||||||||||||    
T  12821967 caacccactagggttggtttggtgatattgacttgggatctgggagtgtgctcctgttcaaggtctcagattc 12822039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 375
Target Start/End: Complemental strand, 20281265 - 20281205
Alignment:
Q  315 ccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtc 375  Q
    |||| ||||||||||   ||||||||||||||||  |||||| |||||||||| |||||||    
T  20281265 ccacttgggttggtccggtggtattgacttgggaattgagagcgtgctcctcctcaaggtc 20281205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 367
Target Start/End: Complemental strand, 52254469 - 52254425
Alignment:
Q  323 gttggtctactggtattgacttgggacctgagagtgtgctcctcc 367  Q
    ||||||||  ||||||||||||||||  |||||||||||||||||    
T  52254469 gttggtctgatggtattgacttgggatatgagagtgtgctcctcc 52254425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 382
Target Start/End: Original strand, 53496899 - 53496947
Alignment:
Q  334 ggtattgacttgggacctgagagtgtgctcctccccaaggtctcagatt 382  Q
    |||||||  |||||||||| |||||||||||||| ||| ||||||||||    
T  53496899 ggtattggtttgggacctgggagtgtgctcctcctcaaagtctcagatt 53496947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 379
Target Start/End: Complemental strand, 55427277 - 55427209
Alignment:
Q  311 caacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    |||||||| |||||||| ||  |||||||| ||||||||||| |||| ||||||| | | |||||||||    
T  55427277 caacccacttgggttggcctggtggtattggcttgggacctgggagtctgctcctgctcgaggtctcag 55427209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 312 - 379
Target Start/End: Complemental strand, 19703563 - 19703496
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||| |||||||| ||| |||||||| |||||||||||||||||||||||||| |||||||||||    
T  19703563 aacccacttgggttggcctagtggtattggcttgggacctgagagtgtgctcctcctcaaggtctcag 19703496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 314 - 379
Target Start/End: Original strand, 2203494 - 2203559
Alignment:
Q  314 cccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||| |||||||| ||| |||||||| ||||||||||| |||||||||||||| |||||||||||    
T  2203494 cccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcag 2203559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 311 - 368
Target Start/End: Complemental strand, 20994535 - 20994478
Alignment:
Q  311 caacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccc 368  Q
    |||||||| |||||||| ||| |||||||||||||||||||| |||||||||||||||    
T  20994535 caacccacttgggttggcctagtggtattgacttgggacctgggagtgtgctcctccc 20994478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 312 - 379
Target Start/End: Original strand, 16852340 - 16852407
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||| |||||||| ||| |||||||| ||||||||||| |||||||||||||| | |||||||||    
T  16852340 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcag 16852407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 314 - 379
Target Start/End: Original strand, 3624582 - 3624647
Alignment:
Q  314 cccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||| |||||||| ||| |||||||| ||||||||||| |||||||||||||  |||||||||||    
T  3624582 cccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcttcaaggtctcag 3624647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 379
Target Start/End: Original strand, 18540298 - 18540365
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||| |||||||| ||| |||||||| ||||||||||| |||||| || |||| |||||||||||    
T  18540298 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtacttctcctcaaggtctcag 18540365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 379
Target Start/End: Complemental strand, 44780190 - 44780123
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||| |||||||| ||| ||| |||| |||||||| || |||||||||||||| |||||||||||    
T  44780190 aacccacttgggttggcctagtggcattggcttgggacttgggagtgtgctcctcctcaaggtctcag 44780123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 333 - 383
Target Start/End: Original strand, 12281515 - 12281565
Alignment:
Q  333 tggtattgacttgggacctgagagtgtgctcctccccaaggtctcagattc 383  Q
    |||||||| |||||||||||||||||||| ||||| | |||||||||||||    
T  12281515 tggtattggcttgggacctgagagtgtgcccctcctcgaggtctcagattc 12281565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 312 - 378
Target Start/End: Original strand, 18897166 - 18897232
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctca 378  Q
    ||||||| |||||||| ||| |||| |||  ||||||||| ||||||||||||||| ||||||||||    
T  18897166 aacccacttgggttggcctagtggtgttggtttgggaccttagagtgtgctcctcctcaaggtctca 18897232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 322 - 379
Target Start/End: Complemental strand, 18546428 - 18546371
Alignment:
Q  322 ggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    |||||||||| ||||||||| ||||||||||||||  ||||||||| | |||||||||    
T  18546428 ggttggtctagtggtattgatttgggacctgagagcatgctcctcctcgaggtctcag 18546371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 379
Target Start/End: Original strand, 8059631 - 8059699
Alignment:
Q  311 caacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    |||||||| |||||||| ||  |||||||||||||| |  |||||||||| |||||| |||||||||||    
T  8059631 caacccacttgggttggcctgatggtattgacttggcatgtgagagtgtgatcctcctcaaggtctcag 8059699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 379
Target Start/End: Original strand, 26688864 - 26688932
Alignment:
Q  311 caacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    |||||||| |||||||| ||  |||| ||| ||||||||||  |||||||||||||| |||||||||||    
T  26688864 caacccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcctcctcaaggtctcag 26688932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 312 - 379
Target Start/End: Original strand, 968362 - 968429
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||| || ||||| ||  |||||||| ||||||||||| |||||||||||||| | |||||||||    
T  968362 aacccacttgagttggcctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcag 968429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 312 - 379
Target Start/End: Original strand, 5264544 - 5264611
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||| |||||||| ||| |||||||| ||||| ||||| || ||||||||||| | |||||||||    
T  5264544 aacccacttgggttggcctagtggtattggcttggaacctgggaatgtgctcctcctcgaggtctcag 5264611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 312 - 383
Target Start/End: Complemental strand, 6436631 - 6436560
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcagattc 383  Q
    ||||||| |||||||  ||  |||||||| |||||||| |  |||||||||||||| |||||||||||||||    
T  6436631 aacccacttgggttgccctggtggtattggcttgggacttaggagtgtgctcctccgcaaggtctcagattc 6436560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 312 - 379
Target Start/End: Complemental strand, 23361725 - 23361658
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||| |||||||  ||  ||||||||||||||||  || |||||||||||||| |||||||||||    
T  23361725 aacccacttgggttgacctggtggtattgacttgggatatgggagtgtgctcctcctcaaggtctcag 23361658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 333 - 379
Target Start/End: Original strand, 6536541 - 6536587
Alignment:
Q  333 tggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    |||||||| ||||||||||  |||||||||||||| |||||||||||    
T  6536541 tggtattggcttgggacctaggagtgtgctcctcctcaaggtctcag 6536587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 366
Target Start/End: Complemental strand, 17727502 - 17727448
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctc 366  Q
    ||||||| |||||||||||  |||| |||||||| ||||| ||||||||||||||    
T  17727502 aacccacttgggttggtctcgtggtgttgacttgagacctcagagtgtgctcctc 17727448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 378
Target Start/End: Original strand, 28783060 - 28783126
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctca 378  Q
    ||||||| ||||||||  |  |||||||| |||| |||||| |||||||||||||| ||||||||||    
T  28783060 aacccacttgggttggcttggtggtattggcttgagacctgggagtgtgctcctcctcaaggtctca 28783126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 376
Target Start/End: Complemental strand, 11793597 - 11793533
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtct 376  Q
    ||||||| |||||||||||  |||| ||  ||||||||||  |||||||||||||| ||||||||    
T  11793597 aacccacttgggttggtcttgtggtgttcgcttgggaccttggagtgtgctcctcctcaaggtct 11793533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 359
Target Start/End: Complemental strand, 25058714 - 25058670
Alignment:
Q  315 ccacctgggttggtctactggtattgacttgggacctgagagtgt 359  Q
    |||| ||| |||||||  |||||||||||||||||||||||||||    
T  25058714 ccacttggtttggtctggtggtattgacttgggacctgagagtgt 25058670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 312 - 379
Target Start/End: Original strand, 22760863 - 22760930
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||| |||||||||||  |||||||||||||||||||| |||||||||||||| |||||||||||    
T  22760863 aacccacttgggttggtctggtggtattgacttgggacctgggagtgtgctcctcctcaaggtctcag 22760930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 312 - 379
Target Start/End: Complemental strand, 26459486 - 26459419
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||| |||||||| ||| |||||||| ||||||||||| |||||||||||||| |||||||||||    
T  26459486 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcag 26459419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 312 - 379
Target Start/End: Original strand, 43215184 - 43215251
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||| |||||||||||| |||||||| ||||||||||  |||||||||||||| |||||||||||    
T  43215184 aacccacttgggttggtctagtggtattggcttgggacctcggagtgtgctcctcctcaaggtctcag 43215251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 312 - 378
Target Start/End: Original strand, 23552118 - 23552184
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctca 378  Q
    ||||||| |||||||| ||| || ||||||||||||||||| |||||||||||||| ||||||||||    
T  23552118 aacccacttgggttggcctagtgctattgacttgggacctgggagtgtgctcctcctcaaggtctca 23552184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 312 - 379
Target Start/End: Complemental strand, 25655304 - 25655237
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||||||||||||| || |||||||||||||||| ||| ||||||| |||||| |||||| ||||    
T  25655304 aacccacctgggttggtttagtggtattgacttgggatctgtgagtgtgatcctcctcaaggtttcag 25655237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 312 - 378
Target Start/End: Complemental strand, 25021411 - 25021345
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctca 378  Q
    ||||||| |||||||| ||| |||||||| ||||||||||| |||||||||||||| ||| ||||||    
T  25021411 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaagtctca 25021345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 311 - 379
Target Start/End: Complemental strand, 20335908 - 20335840
Alignment:
Q  311 caacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    |||||||| ||||||||||||  ||||||| |||||||| || |||||||||||||| | |||||||||    
T  20335908 caacccacttgggttggtctagaggtattggcttgggacttgggagtgtgctcctcctcgaggtctcag 20335840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 379
Target Start/End: Original strand, 7801180 - 7801247
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||| ||| |||| ||  |||||||||||||||||||| |||||||||||||  |||||||||||    
T  7801180 aacccacttggtttggcctggtggtattgacttgggacctgggagtgtgctcctcttcaaggtctcag 7801247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 379
Target Start/End: Complemental strand, 17041088 - 17041021
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||| |||||||||||| ||| |||| ||||||| |||  ||||||||||||| |||||||||||    
T  17041088 aacccacttgggttggtctagtggcattggcttgggatctggaagtgtgctcctcctcaaggtctcag 17041021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 320 - 367
Target Start/End: Complemental strand, 36803695 - 36803648
Alignment:
Q  320 tgggttggtctactggtattgacttgggacctgagagtgtgctcctcc 367  Q
    |||||||||||| |||||||||||||||||||| |||| |||||||||    
T  36803695 tgggttggtctagtggtattgacttgggacctgggagtatgctcctcc 36803648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 379
Target Start/End: Original strand, 39631844 - 39631911
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||| |||||||| ||| |||||||| ||||||||||| ||||  |||||||| |||||||||||    
T  39631844 aacccacttgggttggcctagtggtattggcttgggacctgggagtaagctcctcctcaaggtctcag 39631911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 379
Target Start/End: Complemental strand, 42836077 - 42836010
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||| |||||||| ||| |||||||| ||||||||||| |||||||||| ||| ||||| |||||    
T  42836077 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcttcctcaaggcctcag 42836010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 333 - 378
Target Start/End: Complemental strand, 3280540 - 3280495
Alignment:
Q  333 tggtattgacttgggacctgagagtgtgctcctccccaaggtctca 378  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  3280540 tggtattggcttgggacccgagagtgtgctcctcctcaaggtctca 3280495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 333 - 374
Target Start/End: Original strand, 27445017 - 27445058
Alignment:
Q  333 tggtattgacttgggacctgagagtgtgctcctccccaaggt 374  Q
    |||||||||||||||||| |||||||||||||||| ||||||    
T  27445017 tggtattgacttgggaccagagagtgtgctcctcctcaaggt 27445058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 333 - 374
Target Start/End: Original strand, 27454744 - 27454785
Alignment:
Q  333 tggtattgacttgggacctgagagtgtgctcctccccaaggt 374  Q
    |||||||||||||||||| |||||||||||||||| ||||||    
T  27454744 tggtattgacttgggaccagagagtgtgctcctcctcaaggt 27454785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 338 - 383
Target Start/End: Complemental strand, 42262145 - 42262100
Alignment:
Q  338 ttgacttgggacctgagagtgtgctcctccccaaggtctcagattc 383  Q
    ||||||||||| ||||||||||||||||||  ||||||||||||||    
T  42262145 ttgacttgggatctgagagtgtgctcctcctaaaggtctcagattc 42262100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 367
Target Start/End: Original strand, 2446303 - 2446363
Alignment:
Q  307 atggcaacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctcc 367  Q
    |||| ||||||| |||||||||||  |||||||| |||||||| || ||||||||||||||    
T  2446303 atggaaacccacttgggttggtctgatggtattggcttgggacttgggagtgtgctcctcc 2446363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 376
Target Start/End: Complemental strand, 5273666 - 5273602
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtct 376  Q
    ||||||| |||||||| ||  |||| ||| |||||||||| ||||||||||||||| ||||||||    
T  5273666 aacccacttgggttggcctggtggtgttggcttgggaccttagagtgtgctcctcctcaaggtct 5273602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 367
Target Start/End: Complemental strand, 23301679 - 23301623
Alignment:
Q  311 caacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctcc 367  Q
    |||||||| |||||||| ||  ||||||||||||||||| || ||||||||||||||    
T  23301679 caacccacttgggttggcctggtggtattgacttgggacttgggagtgtgctcctcc 23301623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 376
Target Start/End: Original strand, 30442488 - 30442552
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtct 376  Q
    ||||||| |||||||| | | |||||||| ||||||||||| |||| ||||||||| ||||||||    
T  30442488 aacccacttgggttggcccagtggtattggcttgggacctgggagtttgctcctcctcaaggtct 30442552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 323 - 378
Target Start/End: Original strand, 21877819 - 21877874
Alignment:
Q  323 gttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctca 378  Q
    ||||| ||| |||||||||||||||||||| ||| ||||||||||  |||||||||    
T  21877819 gttggcctagtggtattgacttgggacctgggagggtgctcctccttaaggtctca 21877874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 320 - 379
Target Start/End: Complemental strand, 41519332 - 41519273
Alignment:
Q  320 tgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    |||||||| ||| ||||||||||||||||  |  |||||||||||||| |||||||||||    
T  41519332 tgggttggcctagtggtattgacttgggatttaggagtgtgctcctcctcaaggtctcag 41519273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 320 - 379
Target Start/End: Complemental strand, 45709776 - 45709717
Alignment:
Q  320 tgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    |||||||| ||| |||||||  ||||||| |||||||||||||||||| | |||||||||    
T  45709776 tgggttggcctagtggtattagcttgggatctgagagtgtgctcctcctcgaggtctcag 45709717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 333 - 379
Target Start/End: Complemental strand, 3968697 - 3968651
Alignment:
Q  333 tggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    |||| ||||||||||||||  |||||||||||||| |||||||||||    
T  3968697 tggtgttgacttgggaccttcgagtgtgctcctcctcaaggtctcag 3968651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 333 - 379
Target Start/End: Original strand, 14058274 - 14058320
Alignment:
Q  333 tggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    |||||||| ||||| |||||||||||||||| ||| |||||||||||    
T  14058274 tggtattgtcttggaacctgagagtgtgctcatcctcaaggtctcag 14058320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 333 - 379
Target Start/End: Original strand, 14368302 - 14368348
Alignment:
Q  333 tggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    |||||||| ||||| |||||||||||||||| ||| |||||||||||    
T  14368302 tggtattgtcttggaacctgagagtgtgctcatcctcaaggtctcag 14368348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 333 - 383
Target Start/End: Complemental strand, 36877269 - 36877219
Alignment:
Q  333 tggtattgacttgggacctgagagtgtgctcctccccaaggtctcagattc 383  Q
    ||||||||||||||||| ||||||| ||||||||  ||||||| |||||||    
T  36877269 tggtattgacttgggacttgagagtatgctcctcttcaaggtcgcagattc 36877219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 366
Target Start/End: Complemental strand, 39499795 - 39499741
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctc 366  Q
    ||||||| |||||||| ||| |||||||| ||||||||||| ||||||| |||||    
T  39499795 aacccacttgggttggcctagtggtattggcttgggacctgtgagtgtgttcctc 39499741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 322 - 379
Target Start/End: Original strand, 2962469 - 2962526
Alignment:
Q  322 ggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    |||||||||| ||||||||  |||| ||||| |||||||||||||| |||| ||||||    
T  2962469 ggttggtctagtggtattggtttggaacctgtgagtgtgctcctcctcaagatctcag 2962526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 335 - 379
Target Start/End: Original strand, 21558151 - 21558195
Alignment:
Q  335 gtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    |||||||||||| |||| ||| ||||||||||| |||||||||||    
T  21558151 gtattgacttggaacctaagaatgtgctcctcctcaaggtctcag 21558195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 383
Target Start/End: Complemental strand, 33460499 - 33460427
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctcc-ccaaggtctcagattc 383  Q
    ||||||||||||||||| |  ||||||||  |||||||||  ||||||| ||||||  |||||||||||||||    
T  33460499 aacccacctgggttggtttggtggtattggtttgggacctaggagtgtggtcctccttcaaggtctcagattc 33460427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 376
Target Start/End: Complemental strand, 38374675 - 38374611
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtct 376  Q
    ||||||| ||||||||  |  |||| ||| |||||||||| ||||||||||||||| ||||||||    
T  38374675 aacccacttgggttggcgtggtggtgttggcttgggaccttagagtgtgctcctcctcaaggtct 38374611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 367
Target Start/End: Complemental strand, 45976996 - 45976944
Alignment:
Q  315 ccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctcc 367  Q
    |||| |||||||| ||| |||||||| |||| |||||| ||||||||||||||    
T  45976996 ccacttgggttggcctagtggtattggcttgtgacctgggagtgtgctcctcc 45976944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 1e-17; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 312 - 378
Target Start/End: Complemental strand, 30883274 - 30883208
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctca 378  Q
    ||||||| |||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||||    
T  30883274 aacccacttgggttggtctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctca 30883208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 312 - 376
Target Start/End: Original strand, 34984806 - 34984870
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtct 376  Q
    ||||||| |||||||||||| |||||||| ||||| ||||| |||||||||||||| ||||||||    
T  34984806 aacccacttgggttggtctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtct 34984870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 312 - 379
Target Start/End: Original strand, 16773807 - 16773874
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||| || ||||||||  |||||||||||||||||||| |||||||||||||| | |||||||||    
T  16773807 aacccacttgagttggtctggtggtattgacttgggacctgggagtgtgctcctcctcgaggtctcag 16773874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 367
Target Start/End: Complemental strand, 21549217 - 21549158
Alignment:
Q  308 tggcaacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctcc 367  Q
    ||||||||||| |||||||| ||| |||||||| ||||||||||| ||||||||||||||    
T  21549217 tggcaacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcc 21549158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 312 - 379
Target Start/End: Original strand, 22737082 - 22737149
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||| |||||||||||| |||||||| |||||||| ||  ||||||||||||||||| |||||||    
T  22737082 aacccacttgggttggtctagtggtattggcttgggacttggaagtgtgctcctccccaatgtctcag 22737149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 320 - 382
Target Start/End: Complemental strand, 14495873 - 14495811
Alignment:
Q  320 tgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcagatt 382  Q
    |||||||||||  |||||||||||||||| ||| |||||||||||||| | ||||||||||||    
T  14495873 tgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtctcagatt 14495811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 320 - 379
Target Start/End: Complemental strand, 892542 - 892483
Alignment:
Q  320 tgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    |||||||| ||| |||||||| |||||||||| ||||||| ||||||| |||||||||||    
T  892542 tgggttggcctagtggtattggcttgggacctcagagtgtactcctcctcaaggtctcag 892483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 379
Target Start/End: Original strand, 25627057 - 25627124
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||| |||||||| ||| |||||||| ||||| || || |||||||||||||| |||||||||||    
T  25627057 aacccacttgggttggcctagtggtattggcttggaacttgggagtgtgctcctcctcaaggtctcag 25627124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 312 - 379
Target Start/End: Complemental strand, 87499 - 87432
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||| | |||||| ||| |||||||| ||||| | ||| |||||||||||||| |||||||||||    
T  87499 aacccacttcggttggcctagtggtattgccttggaatctgggagtgtgctcctcctcaaggtctcag 87432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 320 - 379
Target Start/End: Complemental strand, 1410727 - 1410668
Alignment:
Q  320 tgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    |||||||||||  ||||||||||||||||  || |||||||||||||| | |||||||||    
T  1410727 tgggttggtctggtggtattgacttgggatatgggagtgtgctcctcctcgaggtctcag 1410668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 312 - 367
Target Start/End: Complemental strand, 8278351 - 8278296
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctcc 367  Q
    ||||||| |||||||||||  |||||||| |||||||| || ||||||||||||||    
T  8278351 aacccacttgggttggtctgatggtattggcttgggacttgggagtgtgctcctcc 8278296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 312 - 379
Target Start/End: Original strand, 14285161 - 14285228
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||| |||||||| | | ||| |||| ||||| ||||| |||||||||||||| |||||||||||    
T  14285161 aacccacttgggttggccgagtggaattggcttggaacctgggagtgtgctcctcctcaaggtctcag 14285228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 312 - 379
Target Start/End: Complemental strand, 40461689 - 40461622
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||| ||||||| |||  ||||||| ||||| ||| |||||||||||| |||| |||||||||||    
T  40461689 aacccacttgggttgatctggtggtattaacttgagacttgagagtgtgcttctcctcaaggtctcag 40461622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 378
Target Start/End: Original strand, 16436626 - 16436683
Alignment:
Q  320 tgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctca 378  Q
    |||||||| ||| |||||||| |||||||| || |||||||||||||| ||||||||||    
T  16436626 tgggttggcctagtggtattggcttgggacttg-gagtgtgctcctcctcaaggtctca 16436683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 378
Target Start/End: Original strand, 16457810 - 16457876
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctca 378  Q
    ||||||| | |||||| ||  |||||||| ||||||||||  |||||||||||||| ||||||||||    
T  16457810 aacccacttaggttggcctggtggtattggcttgggaccttggagtgtgctcctcctcaaggtctca 16457876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 366
Target Start/End: Original strand, 26598524 - 26598578
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctc 366  Q
    ||||||| ||| |||| ||| |||||||| ||||||| |||||||||||||||||    
T  26598524 aacccacttggattggcctagtggtattggcttgggatctgagagtgtgctcctc 26598578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 333 - 379
Target Start/End: Original strand, 37148047 - 37148093
Alignment:
Q  333 tggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    |||||||||| || |||||| |||||||||||||| |||||||||||    
T  37148047 tggtattgacctgagacctgtgagtgtgctcctcctcaaggtctcag 37148093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 322 - 367
Target Start/End: Original strand, 18437095 - 18437140
Alignment:
Q  322 ggttggtctactggtattgacttgggacctgagagtgtgctcctcc 367  Q
    |||||| ||| ||||||| ||||||||| |||||||||||||||||    
T  18437095 ggttggcctagtggtattaacttgggacttgagagtgtgctcctcc 18437140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 379
Target Start/End: Original strand, 17155832 - 17155889
Alignment:
Q  320 tgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||||| || ||||||||  |||||||||||||  |||||||||| |||||||||||    
T  17155832 tgggttggtttagtggtattggtttgggacctgaga--gtgctcctcctcaaggtctcag 17155889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 6e-16; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 320 - 379
Target Start/End: Original strand, 34444811 - 34444870
Alignment:
Q  320 tgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    |||||||| ||  ||||||||||||||||||| |||||||||||||||||||||||||||    
T  34444811 tgggttggcctggtggtattgacttgggaccttagagtgtgctcctccccaaggtctcag 34444870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 312 - 379
Target Start/End: Original strand, 33549104 - 33549171
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||| |||||||||||  |||||||| ||||||||||| |||||||||||||| | |||||||||    
T  33549104 aacccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcag 33549171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 312 - 374
Target Start/End: Complemental strand, 12188379 - 12188317
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggt 374  Q
    ||||||| |||||||| ||| |||||||| ||||||||||| |||||||||||||| ||||||    
T  12188379 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggt 12188317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 379
Target Start/End: Complemental strand, 31623067 - 31623000
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||| ||||||||||   |||||||| ||||||||||| |||||||||||||| | |||||||||    
T  31623067 aacccacttgggttggtccggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcag 31623000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 320 - 367
Target Start/End: Complemental strand, 3968262 - 3968215
Alignment:
Q  320 tgggttggtctactggtattgacttgggacctgagagtgtgctcctcc 367  Q
    |||||||||||| ||||||||||||| ||| | |||||||||||||||    
T  3968262 tgggttggtctattggtattgacttgagactttagagtgtgctcctcc 3968215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 333 - 379
Target Start/End: Original strand, 6385883 - 6385929
Alignment:
Q  333 tggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    |||||||||||||||||||| || |||||||||||  ||||||||||    
T  6385883 tggtattgacttgggacctgggactgtgctcctccttaaggtctcag 6385929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 333 - 379
Target Start/End: Complemental strand, 10338229 - 10338183
Alignment:
Q  333 tggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    |||||||| ||||||||||  |||||||||||||| |||||||||||    
T  10338229 tggtattggcttgggacctaggagtgtgctcctcctcaaggtctcag 10338183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 341 - 379
Target Start/End: Complemental strand, 23910158 - 23910120
Alignment:
Q  341 acttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    |||||||||||| |||||||||||||| |||||||||||    
T  23910158 acttgggacctgggagtgtgctcctcctcaaggtctcag 23910120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 333 - 383
Target Start/End: Original strand, 28363958 - 28364008
Alignment:
Q  333 tggtattgacttgggacctgagagtgtgctcctccccaaggtctcagattc 383  Q
    ||||||||  |||||| ||| |||||||||||||| |||||||||||||||    
T  28363958 tggtattggtttgggatctgcgagtgtgctcctcctcaaggtctcagattc 28364008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 383
Target Start/End: Original strand, 3779338 - 3779410
Alignment:
Q  311 caacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcagattc 383  Q
    |||||||| | |||||  ||| |||||||| |||| ||| || |||||||||||| | |||||||||||||||    
T  3779338 caacccacttaggttgacctagtggtattggcttgagacttgggagtgtgctccttctcaaggtctcagattc 3779410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 364
Target Start/End: Complemental strand, 12234583 - 12234531
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcc 364  Q
    ||||||| | |||||| ||  |||||||||||||||||||| |||||||||||    
T  12234583 aacccacttaggttggcctggtggtattgacttgggacctgggagtgtgctcc 12234531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 311 - 379
Target Start/End: Complemental strand, 15400 - 15332
Alignment:
Q  311 caacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    |||||||| |||||||||||  |||||||| ||||||||||| |||||||||||||| | |||||||||    
T  15400 caacccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcag 15332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 312 - 376
Target Start/End: Original strand, 25297772 - 25297836
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtct 376  Q
    ||||||| |||||||||||| |||||||||||| ||| |||||||||||||||||| | ||||||    
T  25297772 aacccacttgggttggtctagtggtattgacttaggatctgagagtgtgctcctcctcgaggtct 25297836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 312 - 379
Target Start/End: Complemental strand, 9165271 - 9165204
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||| |||||||| ||| |||||||| ||||||||||| |||||||||||||| ||| |||||||    
T  9165271 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaagtctcag 9165204  T

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Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 320 - 383
Target Start/End: Original strand, 10526831 - 10526894
Alignment:
Q  320 tgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcagattc 383  Q
    |||||||||| | |||||||| ||||||||||| |||| ||||||||| |||||||||||||||    
T  10526831 tgggttggtccagtggtattggcttgggacctgggagtttgctcctcctcaaggtctcagattc 10526894  T

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Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 312 - 383
Target Start/End: Complemental strand, 27567198 - 27567127
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcagattc 383  Q
    ||||||| ||||||||||   || ||||||||||| |||||||||||||||||||  |||||||||||||||    
T  27567198 aacccacttgggttggtcggatgatattgacttggaacctgagagtgtgctcctcttcaaggtctcagattc 27567127  T

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Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 312 - 379
Target Start/End: Original strand, 51814494 - 51814561
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||| |||||||| ||  ||||||||||||| || |||||||||||||||||| |||||||||||    
T  51814494 aacccacttgggttggcctgatggtattgacttgagatctgagagtgtgctcctcctcaaggtctcag 51814561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 313 - 382
Target Start/End: Original strand, 44126396 - 44126465
Alignment:
Q  313 acccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcagatt 382  Q
    |||||| |||||||| ||  |||||||||| ||||||||| |||||||||||||| | ||||||||||||    
T  44126396 acccacttgggttggcctggtggtattgacctgggacctgggagtgtgctcctccacgaggtctcagatt 44126465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 315 - 379
Target Start/End: Complemental strand, 15786393 - 15786329
Alignment:
Q  315 ccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    |||| |||||||||||| | |||||| ||||||| ||| |||||||||||||| |||||||||||    
T  15786393 ccacttgggttggtctagtagtattggcttgggatctgggagtgtgctcctcctcaaggtctcag 15786329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 312 - 376
Target Start/End: Complemental strand, 31794340 - 31794276
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtct 376  Q
    ||||||| |||||||| ||| |||||||| |||||||| || |||||||||||||| ||||||||    
T  31794340 aacccacttgggttggcctagtggtattggcttgggacttgggagtgtgctcctcctcaaggtct 31794276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 312 - 376
Target Start/End: Original strand, 36371470 - 36371534
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtct 376  Q
    ||||||| |||||||| ||| |||||||| ||||| ||||| |||||||||||||| ||||||||    
T  36371470 aacccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtct 36371534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 383
Target Start/End: Original strand, 1094525 - 1094596
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcagattc 383  Q
    ||||||| ||||||||| |  |||||||||||||| ||||| |||||||||||||| | |||||||| ||||    
T  1094525 aacccacttgggttggtttgttggtattgacttggaacctgtgagtgtgctcctccacgaggtctcaaattc 1094596  T

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Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 312 - 378
Target Start/End: Original strand, 8904414 - 8904480
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctca 378  Q
    ||||||| |||||||| ||| | ||||||||||||||  || |||||||||||||| ||||||||||    
T  8904414 aacccacttgggttggcctagtagtattgacttgggatatgtgagtgtgctcctcctcaaggtctca 8904480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 378
Target Start/End: Complemental strand, 17745324 - 17745266
Alignment:
Q  320 tgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctca 378  Q
    |||||||| ||| |||||||| ||||||||||||| |||||||||||| | ||||||||    
T  17745324 tgggttggcctagtggtattggcttgggacctgagcgtgtgctcctcctcgaggtctca 17745266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 333 - 367
Target Start/End: Original strand, 36124854 - 36124888
Alignment:
Q  333 tggtattgacttgggacctgagagtgtgctcctcc 367  Q
    |||||||||||||||||||||||||||||||||||    
T  36124854 tggtattgacttgggacctgagagtgtgctcctcc 36124888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 314 - 379
Target Start/End: Complemental strand, 33700847 - 33700782
Alignment:
Q  314 cccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||| |||||||| ||| |||||||| ||||| | ||| |||||||||||||| |||||||||||    
T  33700847 cccacttgggttggcctagtggtattggcttggaatctgggagtgtgctcctcctcaaggtctcag 33700782  T

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Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 322 - 383
Target Start/End: Original strand, 42787218 - 42787279
Alignment:
Q  322 ggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcagattc 383  Q
    |||||| ||| ||||||||||||||||| |||||||| | |||||| ||| |||||||||||    
T  42787218 ggttggcctagtggtattgacttgggacttgagagtgcgttcctcctcaaagtctcagattc 42787279  T

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Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 376
Target Start/End: Original strand, 11063564 - 11063620
Alignment:
Q  320 tgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtct 376  Q
    ||||||| |||| |||||||| |||||||||||| |||||| |||||| ||||||||    
T  11063564 tgggttgatctagtggtattggcttgggacctgaaagtgtgttcctcctcaaggtct 11063620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 379
Target Start/End: Complemental strand, 16170055 - 16169987
Alignment:
Q  311 caacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    |||||||| |||||| | ||  |||||||||||||||||||| ||||||| |||||| |||||| ||||    
T  16170055 caacccacttgggttagcctggtggtattgacttgggacctgggagtgtgttcctcctcaaggtttcag 16169987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 379
Target Start/End: Complemental strand, 19528404 - 19528336
Alignment:
Q  311 caacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    |||||||| |||||||| ||  |||||||| ||||||| ||  |||||||||||||| |||||||||||    
T  19528404 caacccacttgggttggcctggtggtattggcttgggatctatgagtgtgctcctcctcaaggtctcag 19528336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 312 - 379
Target Start/End: Original strand, 4566548 - 4566615
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||| |||||||| ||| || ||||| ||||| ||||| |||||||||||||| || ||||||||    
T  4566548 aacccacttgggttggcctagtgatattggcttggaacctgggagtgtgctcctcctcagggtctcag 4566615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 378
Target Start/End: Original strand, 37400282 - 37400340
Alignment:
Q  320 tgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctca 378  Q
    |||||||||||  |||||||| |||| ||||||| |||||||||||||  |||||||||    
T  37400282 tgggttggtctggtggtattggcttgagacctgaaagtgtgctcctccttaaggtctca 37400340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 378
Target Start/End: Original strand, 40257399 - 40257465
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctca 378  Q
    ||||||| |||||||| ||  |||||||| |||| |||||| |||||||||||||| | ||||||||    
T  40257399 aacccacttgggttggcctggtggtattggcttgagacctgggagtgtgctcctcctcgaggtctca 40257465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 382
Target Start/End: Original strand, 41508831 - 41508901
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcagatt 382  Q
    ||||||| |||||||| ||  ||||| ||  |||||| ||| |||||||||||||| ||||||||||||||    
T  41508831 aacccacttgggttggcctggtggtactggtttgggatctgggagtgtgctcctcctcaaggtctcagatt 41508901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 379
Target Start/End: Original strand, 952510 - 952578
Alignment:
Q  311 caacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    |||||||| || ||||||||  |||| ||| ||||||||||| |||||||||| ||| ||| |||||||    
T  952510 caacccacttgagttggtctggtggtgttggcttgggacctgggagtgtgctcatcctcaaagtctcag 952578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 8177247 - 8177191
Alignment:
Q  323 gttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||| ||| |||||||| ||||||| ||| |||||||||||||| |||||| ||||    
T  8177247 gttggcctagtggtattggcttgggatctgggagtgtgctcctcctcaaggtttcag 8177191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 383
Target Start/End: Original strand, 50901581 - 50901653
Alignment:
Q  312 aacccacctgggttggtctactggta-ttgacttgggacctgagagtgtgctcctccccaaggtctcagattc 383  Q
    ||||||| |||||||| ||| ||||| ||| |||||||||||  ||||||||||||| | |||||||| ||||    
T  50901581 aacccacttgggttggcctagtggtaattggcttgggacctggtagtgtgctcctcctcgaggtctcaaattc 50901653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 312 - 379
Target Start/End: Original strand, 14186648 - 14186714
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||| |||||||| ||| |||||||| ||||||||||| |||||||||||||| |||||||||||    
T  14186648 aacccacttgggttggcctagtggtattgtcttgggacctg-gagtgtgctcctcctcaaggtctcag 14186714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 312 - 379
Target Start/End: Original strand, 30311306 - 30311373
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    |||||||||||||||| ||| |||||| | ||||||| ||| |||||||||||||| |||||||||||    
T  30311306 aacccacctgggttggcctagtggtataggcttgggatctgggagtgtgctcctcctcaaggtctcag 30311373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 333 - 383
Target Start/End: Original strand, 21960572 - 21960622
Alignment:
Q  333 tggtattgacttgggacctgagagtgtgctcctccccaaggtctcagattc 383  Q
    |||||||| |||||||||||||||||||||||||| | |||||||||||||    
T  21960572 tggtattggcttgggacctgagagtgtgctcctcctcgaggtctcagattc 21960622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 311 - 379
Target Start/End: Complemental strand, 16354969 - 16354901
Alignment:
Q  311 caacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    |||||||| |||||||| ||| |||||||| ||||| ||||| |||||||||||||| || ||||||||    
T  16354969 caacccacttgggttggcctagtggtattggcttggaacctgtgagtgtgctcctcctcagggtctcag 16354901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 323 - 383
Target Start/End: Complemental strand, 32651503 - 32651443
Alignment:
Q  323 gttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcagattc 383  Q
    ||||| ||| |||||||| ||||||||||| |||||||||||||| |||| ||||||||||    
T  32651503 gttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaagatctcagattc 32651443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 315 - 379
Target Start/End: Original strand, 53412948 - 53413012
Alignment:
Q  315 ccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    |||| |||||||||||| |||||||| ||||  ||||| |||||||||||||| |||||||||||    
T  53412948 ccacttgggttggtctagtggtattggcttgtaacctgggagtgtgctcctcctcaaggtctcag 53413012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 320 - 379
Target Start/End: Complemental strand, 4844579 - 4844520
Alignment:
Q  320 tgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    |||||||||||  |||||||||||||||| ||| |||||||||||||| | |||||||||    
T  4844579 tgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtctcag 4844520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 320 - 379
Target Start/End: Complemental strand, 4870275 - 4870216
Alignment:
Q  320 tgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    |||||||||||  |||||||||||||||| ||| |||||||||||||| | |||||||||    
T  4870275 tgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtctcag 4870216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 379
Target Start/End: Complemental strand, 27093437 - 27093370
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||| |||||||| ||| |||||||| ||||| || || |||||||||||||| |||||||||||    
T  27093437 aacccacttgggttggcctagtggtattggcttggaacttgggagtgtgctcctcctcaaggtctcag 27093370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 379
Target Start/End: Complemental strand, 37788541 - 37788474
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||| |||||||| | | |||||||||||||| ||||  |||||||||||||| |||||||||||    
T  37788541 aacccacttgggttggcccagtggtattgacttggaacctaggagtgtgctcctcctcaaggtctcag 37788474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 333 - 378
Target Start/End: Complemental strand, 39976486 - 39976441
Alignment:
Q  333 tggtattgacttgggacctgagagtgtgctcctccccaaggtctca 378  Q
    ||||||||||||||||| ||||||||||||||| | ||||||||||    
T  39976486 tggtattgacttgggacttgagagtgtgctccttctcaaggtctca 39976441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 376
Target Start/End: Complemental strand, 5499483 - 5499419
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtct 376  Q
    ||||||| |||||||| ||  ||||||||||||| || ||||||||||||||||||  |||||||    
T  5499483 aacccacttgggttggcctggtggtattgacttgagatctgagagtgtgctcctccttaaggtct 5499419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 312 - 379
Target Start/End: Complemental strand, 11642285 - 11642218
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||| ||| |||| ||||||||||  |||||||| |||||| |||| |||||| |||||||||||    
T  11642285 aacccacttggattggcctactggtataaacttgggatctgagattgtgatcctcctcaaggtctcag 11642218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 320 - 367
Target Start/End: Original strand, 12761520 - 12761567
Alignment:
Q  320 tgggttggtctactggtattgacttgggacctgagagtgtgctcctcc 367  Q
    |||||||||||  |||||||||||||||||||| ||||||| ||||||    
T  12761520 tgggttggtctggtggtattgacttgggacctgggagtgtgttcctcc 12761567  T

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Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 320 - 383
Target Start/End: Complemental strand, 34929009 - 34928946
Alignment:
Q  320 tgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcagattc 383  Q
    ||||||| |||| || ||| ||||| |||||||||||| |||||||||  ||||||||||||||    
T  34929009 tgggttgatctagtgatatggacttaggacctgagagtatgctcctccttaaggtctcagattc 34928946  T

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Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 312 - 379
Target Start/End: Original strand, 46518628 - 46518695
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||| ||||||||  || |||||||| ||||||| ||| |||||||||||||| |||||| ||||    
T  46518628 aacccacttgggttggcatagtggtattggcttgggatctgggagtgtgctcctcctcaaggtttcag 46518695  T

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Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 379
Target Start/End: Original strand, 11612304 - 11612366
Alignment:
Q  317 acctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||||||| ||  ||||||| |||||||| ||| ||||||||||||||  ||||||||||    
T  11612304 acctgggttggcctggtggtattcacttgggagctgggagtgtgctcctccttaaggtctcag 11612366  T

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Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 365
Target Start/End: Original strand, 26411569 - 26411598
Alignment:
Q  336 tattgacttgggacctgagagtgtgctcct 365  Q
    ||||||||||||||||||||||||||||||    
T  26411569 tattgacttgggacctgagagtgtgctcct 26411598  T

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Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 377
Target Start/End: Complemental strand, 47810820 - 47810755
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctc 377  Q
    ||||||| |||||||||||  |||||||| ||| || | || |||||||||||||| |||||||||    
T  47810820 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctc 47810755  T

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Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 376
Target Start/End: Original strand, 4222141 - 4222205
Alignment:
Q  312 aacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtct 376  Q
    ||||||| ||||||||  || |||||||| ||||||| ||| |||||||||||||| ||| ||||    
T  4222141 aacccacttgggttggcttagtggtattggcttgggatctgggagtgtgctcctcctcaaagtct 4222205  T

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Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 379
Target Start/End: Complemental strand, 10445216 - 10445148
Alignment:
Q  312 aacccacctgggttggtctactggta-ttgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||||| |||||||| ||| ||| | ||| ||||||||||| |||||||||||||| | |||||||||    
T  10445216 aacccacttgggttggcctagtggcaattggcttgggacctgggagtgtgctcctcctcgaggtctcag 10445148  T

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Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 343 - 379
Target Start/End: Original strand, 20501727 - 20501763
Alignment:
Q  343 ttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    |||||||||||||||||||||||||  ||||||||||    
T  20501727 ttgggacctgagagtgtgctcctccttaaggtctcag 20501763  T

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Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 367
Target Start/End: Complemental strand, 28928952 - 28928900
Alignment:
Q  315 ccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctcc 367  Q
    |||| ||| |||| ||| |||||||| ||||||| ||||||||||||||||||    
T  28928952 ccacttggattggcctagtggtattggcttgggatctgagagtgtgctcctcc 28928900  T

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Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 367
Target Start/End: Complemental strand, 31789047 - 31788991
Alignment:
Q  311 caacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctcc 367  Q
    |||||||| |||||||| ||| || ||||| ||||||| ||| ||||||||||||||    
T  31789047 caacccacttgggttggcctagtgttattggcttgggatctgggagtgtgctcctcc 31788991  T

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Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 367
Target Start/End: Complemental strand, 45699993 - 45699949
Alignment:
Q  323 gttggtctactggtattgacttgggacctgagagtgtgctcctcc 367  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||||    
T  45699993 gttggcctattggtattgatttgggacttgagagtgtgctcctcc 45699949  T

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Target: scaffold0002 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 315 - 379
Target Start/End: Complemental strand, 95044 - 94980
Alignment:
Q  315 ccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    |||| |||||||| ||| |||||||| ||||| ||||| |||||||||||||| |||||||||||    
T  95044 ccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtctcag 94980  T

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Target: scaffold0211 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 310 - 366
Target Start/End: Original strand, 24051 - 24107
Alignment:
Q  310 gcaacccacctgggttggtctactggtattgacttgggacctgagagtgtgctcctc 366  Q
    ||||||||| |||||||| ||| ||||||||||||||||| |  |||||||||||||    
T  24051 gcaacccacttgggttggcctaatggtattgacttgggacttaggagtgtgctcctc 24107  T

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Target: scaffold0006 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 376
Target Start/End: Complemental strand, 163077 - 163021
Alignment:
Q  320 tgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtct 376  Q
    |||||||||||| |||| |||||||  |||||||||||||||||||||  |||||||    
T  163077 tgggttggtctagtggttttgacttatgacctgagagtgtgctcctccataaggtct 163021  T

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Target: scaffold0517 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 378
Target Start/End: Complemental strand, 7794 - 7736
Alignment:
Q  320 tgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctca 378  Q
    |||||||||||  |||||||| |||| ||||||| |||||||||||||  |||||||||    
T  7794 tgggttggtctggtggtattggcttgagacctgaaagtgtgctcctccttaaggtctca 7736  T

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Target: scaffold0180 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 20027 - 19971
Alignment:
Q  323 gttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcag 379  Q
    ||||| ||| |||||||| ||||| ||||| |||| ||||||||| |||||||||||    
T  20027 gttggcctagtggtattggcttggaacctgggagtatgctcctcctcaaggtctcag 19971  T

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