View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8560_low_28 (Length: 276)
Name: NF8560_low_28
Description: NF8560
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8560_low_28 |
 | |
|
| [»] chr2 (9 HSPs) |
| |
|
| [»] chr7 (27 HSPs) |
| |
|
| [»] chr1 (3 HSPs) |
| |
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Alignment Details
Target: chr2 (Bit Score: 245; Significance: 1e-136; HSPs: 9)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 20 - 276
Target Start/End: Complemental strand, 16657781 - 16657525
Alignment:
| Q |
20 |
gaagaaaagtcaattccctgaaataaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacc |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16657781 |
gaagaaaagtcaattccctgaaataaagaatctacctcaacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacc |
16657682 |
T |
|
| Q |
120 |
tcctcaaggctcttggattcccacttatgtccaccttattcttcttttgaaactcctctacaaagtagttcaccgttctgttatcaaagtcctctccccc |
219 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16657681 |
tcctcaaggctcttgagttcccacttatgtccaccttattcttcttttgaaactcctctacaaagtagttcaccgttctgttatcaaagtcctctccccc |
16657582 |
T |
|
| Q |
220 |
aaggtgagtgtttccggcagtggcttttacctcaaaaacatcacccttaattgtaag |
276 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16657581 |
aaggtgagtgtttccggcagtggcttttacctcaaaaacatcacccttaattgtaag |
16657525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 20 - 243
Target Start/End: Original strand, 7542130 - 7542353
Alignment:
| Q |
20 |
gaagaaaagtcaattccctgaaataaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacc |
119 |
Q |
| |
|
|||||||||||||| || |||||||||||||||||||| | ||||| |||| | ||||| |||| || |||||||||||||| ||||||||||||| |
|
|
| T |
7542130 |
gaagaaaagtcaatgccttgaaataaagaatctacctcaatagtggcaacaacaaggaaagaaagtgatctttttgccctctcacaagcagttctcaacc |
7542229 |
T |
|
| Q |
120 |
tcctcaaggctcttggattcccacttatgtccaccttattc-ttcttttgaaactcctctacaaagtagttcaccgttctgttatcaaagtcctctcccc |
218 |
Q |
| |
|
||||||||||| ||||||||||||| |||||||| || ||| |||| ||| ||||| | ||||||||||||| || |||| ||||||||||| ||||| | |
|
|
| T |
7542230 |
tcctcaaggcttttggattcccactaatgtccactttgttctttctcttg-aactcttgtacaaagtagttcgccattctattatcaaagtcttctccac |
7542328 |
T |
|
| Q |
219 |
caaggtgagtgtttccggcagtggc |
243 |
Q |
| |
|
||||||||||||| || |||||||| |
|
|
| T |
7542329 |
caaggtgagtgttgccagcagtggc |
7542353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 77 - 273
Target Start/End: Complemental strand, 16662199 - 16662003
Alignment:
| Q |
77 |
aaagagagtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttggattcccacttatgtccaccttattcttcttttgaaactcct |
176 |
Q |
| |
|
|||||||||||||| || ||| | ||||| | |||||||||||||||||||||||||||||||| | | || ||||| || |||||| | | ||| || | |
|
|
| T |
16662199 |
aaagagagtgtccttttcgccttttcacaagaagttctcaacctcctcaaggctcttggattcctagtgatatccactttgttcttcctattaaattctt |
16662100 |
T |
|
| Q |
177 |
ctacaaagtagttcaccgttctgttatcaaagtcctctcccccaaggtgagtgtttccggcagtggcttttacctcaaaaacatcacccttaattgt |
273 |
Q |
| |
|
||||||||||||| | ||||||||||||||||||||||||| |||||||||||||| | ||||||||| || ||||| |||||||| |||||||| |
|
|
| T |
16662099 |
tcacaaagtagttcaacattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgt |
16662003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 41 - 246
Target Start/End: Original strand, 43625337 - 43625542
Alignment:
| Q |
41 |
aataaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttggattcc |
140 |
Q |
| |
|
||||||||||||||||| | |||| ||| |||||||||| |||||||| ||| | ||||| ||||| ||||||||||| || | |||||||| || | |
|
|
| T |
43625337 |
aataaagaatctacctcaatagtgctgaacgaagcaaaagacagtgtcctttttcctctctcgcatgccgttctcaaccttcttatggctcttgagtttc |
43625436 |
T |
|
| Q |
141 |
cacttatgtccaccttattcttcttttgaaactcctctacaaagtagttcaccgttctgttatcaaagtcctctcccccaaggtgagtgtttccggcagt |
240 |
Q |
| |
|
|| | || ||||| || |||||||| | ||| || ||| |||||||||||||| |||| | ||||||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
43625437 |
caataatatccacattgttcttcttctcaaattcttctgcaaagtagttcaccattctatcatcaaagtcctctcctccaaggtgagtgtttccagcagt |
43625536 |
T |
|
| Q |
241 |
ggcttt |
246 |
Q |
| |
|
|||||| |
|
|
| T |
43625537 |
ggcttt |
43625542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 92 - 246
Target Start/End: Original strand, 12234665 - 12234819
Alignment:
| Q |
92 |
tttgccctctcacatgcagttctcaacctcctcaaggctcttggattcccacttatgtccaccttattctt-cttttgaaactcctctacaaagtagttc |
190 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||||||||| ||||||| ||||| |||||||| || ||||| || ||||| ||| | ||| |||||| |
|
|
| T |
12234665 |
tttgccctctcacaagcagttcttaacctcctcaaggcttttggatttccactcatgtccacttttttctttctattgaa-ctcttgagcaaggtagttt |
12234763 |
T |
|
| Q |
191 |
accgttctgttatcaaagtcctctcccccaaggtgagtgtttccggcagtggcttt |
246 |
Q |
| |
|
||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||| |
|
|
| T |
12234764 |
accattctgttatcaaagtcctctcccccgaggtgagtgtttccggctgtggcttt |
12234819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 240
Target Start/End: Original strand, 14703312 - 14703532
Alignment:
| Q |
20 |
gaagaaaagtcaattccctgaaataaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacc |
119 |
Q |
| |
|
|||||||||||||| | |||||||||| ||||||||| | ||||| ||||| ||||| ||||| || ||||||||||| || || |||||||| | |
|
|
| T |
14703312 |
gaagaaaagtcaatgcattgaaataaagcatctacctcaatagtggcgacaacttggaaagaaagtgttctttttgccctctcgcaagcggttctcaagc |
14703411 |
T |
|
| Q |
120 |
tcctcaaggctcttggattcccacttatgtccac-cttattcttcttttgaaactcctctacaaagtagttcaccgttctgttatcaaagtcctctcccc |
218 |
Q |
| |
|
|||| |||||| ||||||| ||||| ||||||| || || |||| ||||| ||| | ||||||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
14703412 |
tccttaaggcttttggatttccactaatgtccaatctgttttttctcttgaa-ctcttgaacaaagtagttcaccattctgttatcgaagtcctctcccc |
14703510 |
T |
|
| Q |
219 |
caaggtgagtgtttccggcagt |
240 |
Q |
| |
|
| |||||||||||||| ||||| |
|
|
| T |
14703511 |
cgaggtgagtgtttccagcagt |
14703532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 243
Target Start/End: Complemental strand, 12245670 - 12245447
Alignment:
| Q |
20 |
gaagaaaagtcaattccctgaaataaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacc |
119 |
Q |
| |
|
|||||||| ||||| || |||||||||||||||||||| | ||| | |||| | ||| || ||| | || |||||||||||||| ||||||||||| | |
|
|
| T |
12245670 |
gaagaaaaatcaatgccttgaaataaagaatctacctcaatagttgcaacaacaagaaacgaaagtattctttttgccctctcacaagcagttctcaatc |
12245571 |
T |
|
| Q |
120 |
tcctcaaggctcttggattcccacttatgtccaccttattctt-cttttgaaactcctctacaaagtagttcaccgttctgttatcaaagtcctctcccc |
218 |
Q |
| |
|
||||||||||| ||| | | |||| || |||| || ||||| || ||||| ||||| | |||||||||| ||| |||| |||||||| |||||||| | |
|
|
| T |
12245570 |
tcctcaaggcttttgaacttgcactaatatccaatttgttctttctcttgaa-ctcctgtgcaaagtagtttaccattctattatcaaaatcctctcctc |
12245472 |
T |
|
| Q |
219 |
caaggtgagtgtttccggcagtggc |
243 |
Q |
| |
|
|||||||||||||||| |||||||| |
|
|
| T |
12245471 |
caaggtgagtgtttccagcagtggc |
12245447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 92 - 234
Target Start/End: Complemental strand, 12258773 - 12258631
Alignment:
| Q |
92 |
tttgccctctcacatgcagttctcaacctcctcaaggctcttggattcccacttatgtccaccttattctt-cttttgaaactcctctacaaagtagttc |
190 |
Q |
| |
|
||||| |||||||| || ||| |||| |||||||| ||||||||||| |||||||| || || || ||||| || ||||| ||| ||||||||||| || |
|
|
| T |
12258773 |
tttgcactctcacaagctgttttcaatctcctcaaagctcttggatttccacttatatctactttgttctttctcttgaa-ctcttctacaaagtaactc |
12258675 |
T |
|
| Q |
191 |
accgttctgttatcaaagtcctctcccccaaggtgagtgtttcc |
234 |
Q |
| |
|
||| |||| ||||||||||||||||| |||||||| |||||||| |
|
|
| T |
12258674 |
accattctattatcaaagtcctctcctccaaggtgcgtgtttcc |
12258631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 130
Target Start/End: Original strand, 11999311 - 11999421
Alignment:
| Q |
20 |
gaagaaaagtcaattccctgaaataaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacc |
119 |
Q |
| |
|
|||||||| ||||| || |||||||||||||||||||| | ||| | |||| | ||| || ||| | || |||||||||||||| ||||||||||||| |
|
|
| T |
11999311 |
gaagaaaaatcaatgccttgaaataaagaatctacctcaatagttgcaacaacaagaaatgatagtattctttttgccctctcacaagcagttctcaacc |
11999410 |
T |
|
| Q |
120 |
tcctcaaggct |
130 |
Q |
| |
|
||||||||||| |
|
|
| T |
11999411 |
tcctcaaggct |
11999421 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 167; Significance: 2e-89; HSPs: 27)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 26 - 276
Target Start/End: Original strand, 8659273 - 8659523
Alignment:
| Q |
26 |
aagtcaattccctgaaataaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctca |
125 |
Q |
| |
|
||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |
|
|
| T |
8659273 |
aagtctattccctgaaataaagaatcgacctcaacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacaggcagttctcaacctcctta |
8659372 |
T |
|
| Q |
126 |
aggctcttggattcccacttatgtccaccttattcttcttttgaaactcctctacaaagtagttcaccgttctgttatcaaagtcctctcccccaaggtg |
225 |
Q |
| |
|
||| | |||| || ||||| |||||||| ||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||| |||||||| |
|
|
| T |
8659373 |
aggattttgggttaccactaatgtccactttattcttctttttgaactcctctacaaagtagttcaccattctgctatcaaagtcctctcctccaaggtg |
8659472 |
T |
|
| Q |
226 |
agtgtttccggcagtggcttttacctcaaaaacatcacccttaattgtaag |
276 |
Q |
| |
|
||||||||| | |||||||||||| ||||| ||||||||||| |||||||| |
|
|
| T |
8659473 |
agtgtttccagaagtggcttttacttcaaagacatcacccttcattgtaag |
8659523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 20 - 273
Target Start/End: Complemental strand, 10494638 - 10494385
Alignment:
| Q |
20 |
gaagaaaagtcaattccctgaaataaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacc |
119 |
Q |
| |
|
||||||||||| |||||| |||||||| ||| ||||| || ||||||||||||| |||||||||| |||| |||||||||||||| ||||||||||||| |
|
|
| T |
10494638 |
gaagaaaagtcgattcccataaataaagcatcgacctcaacggtggtgacaaaagaaaaagagagtatcctttttgccctctcacaggcagttctcaacc |
10494539 |
T |
|
| Q |
120 |
tcctcaaggctcttggattcccacttatgtccaccttattcttcttttgaaactcctctacaaagtagttcaccgttctgttatcaaagtcctctccccc |
219 |
Q |
| |
|
|||| |||| | ||||||||||||| |||||||| ||||||||||||| |||||||| ||||| || |||||| |||||||||| |||||||||||||| |
|
|
| T |
10494538 |
tccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaaaataattcaccattctgttatcgaagtcctctccccc |
10494439 |
T |
|
| Q |
220 |
aaggtgagtgtttccggcagtggcttttacctcaaaaacatcacccttaattgt |
273 |
Q |
| |
|
|||||||||||| || |||||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
10494438 |
aaggtgagtgttacctgcagtggcttttacttcaaagacatcacccttaattgt |
10494385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 20 - 273
Target Start/End: Original strand, 8654354 - 8654607
Alignment:
| Q |
20 |
gaagaaaagtcaattccctgaaataaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacc |
119 |
Q |
| |
|
||||||||||| |||||| |||||||| ||||||||| |||||||||||||||| |||||||||| |||| |||||||||||||| ||||||||||||| |
|
|
| T |
8654354 |
gaagaaaagtcgattcccataaataaagcatctacctcaacagtggtgacaaaagtaaaagagagtatcctttttgccctctcacaggcagttctcaacc |
8654453 |
T |
|
| Q |
120 |
tcctcaaggctcttggattcccacttatgtccaccttattcttcttttgaaactcctctacaaagtagttcaccgttctgttatcaaagtcctctccccc |
219 |
Q |
| |
|
|||| |||| | |||| || || || || ||||| ||||||||||||| ||||||||||||||||||| |||| |||||||||||||||| |||||||| |
|
|
| T |
8654454 |
tccttaaggattttgggttaccgctaatttccactttattcttctttttgaactcctctacaaagtagtacaccattctgttatcaaagtcttctccccc |
8654553 |
T |
|
| Q |
220 |
aaggtgagtgtttccggcagtggcttttacctcaaaaacatcacccttaattgt |
273 |
Q |
| |
|
||||| |||||||| |||||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
8654554 |
taggtgcgtgtttccagcagtggcttttacgtcaaagacatcacccttaattgt |
8654607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 24 - 273
Target Start/End: Original strand, 8667327 - 8667576
Alignment:
| Q |
24 |
aaaagtcaattccctgaaataaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcct |
123 |
Q |
| |
|
||||||| |||||| |||||||| ||||||||| |||||||| |||||||||||||||||| |||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
8667327 |
aaaagtcgattcccgtaaataaagcatctacctcaacagtggtaacaaaagcaaaagagagtatcctttttgccctctcacaggcagttctcaacctcct |
8667426 |
T |
|
| Q |
124 |
caaggctcttggattcccacttatgtccaccttattcttcttttgaaactcctctacaaagtagttcaccgttctgttatcaaagtcctctcccccaagg |
223 |
Q |
| |
|
|||| | |||| ||| ||| |||||||| ||||||||||||| |||||||| ||||| ||||||||| |||||||||| |||||||| ||||||||| |
|
|
| T |
8667427 |
taaggattttgggttctgactgatgtccactttattcttcttttttaactcctcaacaaaatagttcaccattctgttatcgaagtcctcgcccccaagg |
8667526 |
T |
|
| Q |
224 |
tgagtgtttccggcagtggcttttacctcaaaaacatcacccttaattgt |
273 |
Q |
| |
|
||||||||||| ||||||||||| || ||||| ||||||||||||||||| |
|
|
| T |
8667527 |
tgagtgtttcctgcagtggctttcacttcaaagacatcacccttaattgt |
8667576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 20 - 276
Target Start/End: Complemental strand, 13333720 - 13333464
Alignment:
| Q |
20 |
gaagaaaagtcaattccctgaaataaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacc |
119 |
Q |
| |
|
||||||||||| |||||| |||||||| |||||| || |||||||||||||||| ||| |||||| |||| ||| |||||||||| ||||||||||||| |
|
|
| T |
13333720 |
gaagaaaagtcgattcccataaataaagcatctacttcaacagtggtgacaaaagaaaaggagagtatccttttttccctctcacaggcagttctcaacc |
13333621 |
T |
|
| Q |
120 |
tcctcaaggctcttggattcccacttatgtccaccttattcttcttttgaaactcctctacaaagtagttcaccgttctgttatcaaagtcctctccccc |
219 |
Q |
| |
|
|||| |||| | |||| |||||||| || || || ||||||||||||| |||||||| ||||| ||||||||| |||||||||| ||||| |||||||| |
|
|
| T |
13333620 |
tccttaaggattttgggttcccactgatatcgacgttattcttctttttgaactcctcaacaaaatagttcaccattctgttatcgaagtcttctccccc |
13333521 |
T |
|
| Q |
220 |
aaggtgagtgtttccggcagtggcttttacctcaaaaacatcacccttaattgtaag |
276 |
Q |
| |
|
||||||||||||||| || ||||||||||| ||||| ||||||||| |||||||||| |
|
|
| T |
13333520 |
aaggtgagtgtttcctgcggtggcttttacttcaaagacatcacccataattgtaag |
13333464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 26 - 276
Target Start/End: Original strand, 1301370 - 1301620
Alignment:
| Q |
26 |
aagtcaattccctgaaataaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctca |
125 |
Q |
| |
|
||||| |||||||||||||||||||| ||||| || |||||||| |||||||||||||||||||| |||||||||||||| ||| ||||||||||||| | |
|
|
| T |
1301370 |
aagtcgattccctgaaataaagaatcgacctcaacggtggtgactaaagcaaaagagagtgtcctttttgccctctcacacgcaattctcaacctcctta |
1301469 |
T |
|
| Q |
126 |
aggctcttggattcccacttatgtccaccttattcttcttttgaaactcctctacaaagtagttcaccgttctgttatcaaagtcctctcccccaaggtg |
225 |
Q |
| |
|
||| | | | || ||||| |||||||| |||||||||||| |||||||||||||||||| ||||| |||| ||||||||||||||||| |||||||| |
|
|
| T |
1301470 |
aggatttctggttaccactaatgtccactttattcttctttctgaactcctctacaaagtagctcaccattctattatcaaagtcctctcctccaaggtg |
1301569 |
T |
|
| Q |
226 |
agtgtttccggcagtggcttttacctcaaaaacatcacccttaattgtaag |
276 |
Q |
| |
|
||| ||||| ||||||||||||| ||||| ||||| ||||| || ||||| |
|
|
| T |
1301570 |
agtatttccaccagtggcttttacttcaaagacatcgcccttgatggtaag |
1301620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 26 - 240
Target Start/End: Complemental strand, 27831133 - 27830919
Alignment:
| Q |
26 |
aagtcaattccctgaaataaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctca |
125 |
Q |
| |
|
|||||||| |||| |||||| | ||||| ||| | ||| ||| ||| || ||||||||||||||| |||||| |||||||| ||||||| |||||||| |
|
|
| T |
27831133 |
aagtcaatgccctcaaataaggcatctatctcaatagtagtgtcaacagaaaaagagagtgtcctttttgccttctcacattaggttctcagcctcctca |
27831034 |
T |
|
| Q |
126 |
aggctcttggattcccacttatgtccaccttattcttcttttgaaactcctctacaaagtagttcaccgttctgttatcaaagtcctctcccccaaggtg |
225 |
Q |
| |
|
|||||||||| |||||||| |||||||| | |||||||| | ||| |||| ||||| ||||||||| | || ||||||||||||||||| |||||||| |
|
|
| T |
27831033 |
aggctcttgggttcccactaatgtccactcttttcttcttcttgaacacctccacaaaatagttcaccatcctattatcaaagtcctctccaccaaggtg |
27830934 |
T |
|
| Q |
226 |
agtgtttccggcagt |
240 |
Q |
| |
|
||||||||| ||||| |
|
|
| T |
27830933 |
agtgtttccagcagt |
27830919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 26 - 234
Target Start/End: Original strand, 3147174 - 3147382
Alignment:
| Q |
26 |
aagtcaattccctgaaataaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctca |
125 |
Q |
| |
|
||||||| |||||||||||||||||||| ||| | ||||||| | ||||||||| ||| | | ||||| || ||||| || ||| |||||||||| | |
|
|
| T |
3147174 |
aagtcaaatccctgaaataaagaatctatctcaatggtggtgatgacagcaaaagatagtattcgttttgctctttcacacgccgttttcaacctcctta |
3147273 |
T |
|
| Q |
126 |
aggctcttggattcccacttatgtccaccttattcttcttttgaaactcctctacaaagtagttcaccgttctgttatcaaagtcctctcccccaaggtg |
225 |
Q |
| |
|
||||||||| ||| |||| ||||| ||||| |||||||| | ||||||| | |||||||||||||| | || |||||||||||||||||||||||||| |
|
|
| T |
3147274 |
aggctcttgagttctcactaatgtctaccttgttcttcttcttaaactcccgtgcaaagtagttcaccatcctattatcaaagtcctctcccccaaggtg |
3147373 |
T |
|
| Q |
226 |
agtgtttcc |
234 |
Q |
| |
|
|||||||| |
|
|
| T |
3147374 |
ggtgtttcc |
3147382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 25 - 276
Target Start/End: Original strand, 8646786 - 8647037
Alignment:
| Q |
25 |
aaagtcaattccctgaaataaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctc |
124 |
Q |
| |
|
||||||||| || | |||||||||||||| || | |||||| | |||||||||| |||||||| ||||| ||||| ||||| |||||||||||||| |
|
|
| T |
8646786 |
aaagtcaatgccattaaataaagaatctaattcaatggtggtgcaagaagcaaaagatagtgtcctttttgctctctcgcatgccgttctcaacctcctt |
8646885 |
T |
|
| Q |
125 |
aaggctcttggattcccacttatgtccaccttattcttcttttgaaactcctctacaaagtagttcaccgttctgttatcaaagtcctctcccccaaggt |
224 |
Q |
| |
|
|||||||||| || ||| | ||||||||||| |||||||| | ||| || | | |||||| || |||| |||| |||||||||||||||| || |||| |
|
|
| T |
8646886 |
aaggctcttgagtttccagtaatgtccaccttgttcttcttgttaaattcttgtgcaaagtggtccaccattctactatcaaagtcctctcctccgaggt |
8646985 |
T |
|
| Q |
225 |
gagtgtttccggcagtggcttttacctcaaaaacatcacccttaattgtaag |
276 |
Q |
| |
|
|||||||||| || |||||||| || | ||| || | | ||||||||||||| |
|
|
| T |
8646986 |
gagtgtttccagcggtggctttaacatgaaagaccttatccttaattgtaag |
8647037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 35 - 230
Target Start/End: Original strand, 17260160 - 17260355
Alignment:
| Q |
35 |
ccctgaaataaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttg |
134 |
Q |
| |
|
|||| |||||||| |||||||| ||| |||| ||| | |||||||| |||||||| ||||| | ||||||||||||||||||||||| |||||| ||| |
|
|
| T |
17260160 |
cccttaaataaagcgtctacctcaacattggtcacagaggcaaaagaaagtgtcctttttgctttttcacatgcagttctcaacctccttaaggcttttg |
17260259 |
T |
|
| Q |
135 |
gattcccacttatgtccaccttattc-ttcttttgaaactcctctacaaagtagttcaccgttctgttatcaaagtcctctcccccaaggtgagtgt |
230 |
Q |
| |
|
| |||||| | ||||||| || ||| |||||||| | |||||||||||| |||| |||| |||| |||||||||||||| |||||||| ||||||| |
|
|
| T |
17260260 |
ggttcccaataatgtccaattttttcgttcttttg-atctcctctacaaaatagtacaccattctattatcaaagtcctcacccccaagatgagtgt |
17260355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 234
Target Start/End: Original strand, 6789422 - 6789630
Alignment:
| Q |
26 |
aagtcaattccctgaaataaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctca |
125 |
Q |
| |
|
||||| || |||||||||||||| |||||||| | ||| ||||| | | ||||||||||| ||| || ||||| ||||| |||||||||||||| || | |
|
|
| T |
6789422 |
aagtcgatgccctgaaataaagagtctacctcaatagtagtgacgacaacaaaagagagtacccttttggccctttcacacgcagttctcaaccttctta |
6789521 |
T |
|
| Q |
126 |
aggctcttggattcccacttatgtccaccttattcttcttttgaaactcctctacaaagtagttcaccgttctgttatcaaagtcctctcccccaaggtg |
225 |
Q |
| |
|
|||| |||| || ||| | || ||||| || |||||| | | |||||||||| |||||||||| ||| || |||||||||||||||||| || ||||| |
|
|
| T |
6789522 |
aggcccttgagtttccagtaatatccactttgttcttcctcttaaactcctctgcaaagtagtttaccaatcggttatcaaagtcctctcctccgaggtg |
6789621 |
T |
|
| Q |
226 |
agtgtttcc |
234 |
Q |
| |
|
||||||||| |
|
|
| T |
6789622 |
agtgtttcc |
6789630 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 77 - 273
Target Start/End: Complemental strand, 8585913 - 8585717
Alignment:
| Q |
77 |
aaagagagtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttggattcccacttatgtccaccttattcttcttttgaaactcct |
176 |
Q |
| |
|
||||| |||||||| |||||| | |||||||| ||||| |||| |||||| |||||||| ||| | | || ||||| || ||||| | | ||| |||| |
|
|
| T |
8585913 |
aaagaaagtgtcctttttgccttttcacatgccgttcttaaccgcctcaaagctcttgggttcttagtaatatccacattgttctttctcttaaattcct |
8585814 |
T |
|
| Q |
177 |
ctacaaagtagttcaccgttctgttatcaaagtcctctcccccaaggtgagtgtttccggcagtggcttttacctcaaaaacatcacccttaattgt |
273 |
Q |
| |
|
| ||||||||||||| | ||||||||||||||||| |||||||||||||||| ||||| || || ||||| || ||||| |||||||| |||||||| |
|
|
| T |
8585813 |
caacaaagtagttcaacattctgttatcaaagtcccctcccccaaggtgagtatttccagcggttgctttaacttcaaagacatcacctttaattgt |
8585717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 83 - 255
Target Start/End: Complemental strand, 7877934 - 7877762
Alignment:
| Q |
83 |
agtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttggattcccacttatgtccaccttattcttcttttgaaactcctctacaa |
182 |
Q |
| |
|
|||||||| || ||||||||||||||||||||||||||||| | ||| || || || |||| |||||||| ||||||||| | | ||||||| || | |
|
|
| T |
7877934 |
agtgtccttttagccctctcacatgcagttctcaacctcctaagggccctcgggtttccaccaatgtccactttattcttcctcttaaactccatcacta |
7877835 |
T |
|
| Q |
183 |
agtagttcaccgttctgttatcaaagtcctctcccccaaggtgagtgtttccggcagtggcttttacctcaaa |
255 |
Q |
| |
|
| | ||||| | |||||||||||||||||||||| || |||||||| | ||||||||| ||| |||| ||||| |
|
|
| T |
7877834 |
aatggttcaacattctgttatcaaagtcctctccacctaggtgagtatctccggcagtagctattacatcaaa |
7877762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 83 - 243
Target Start/End: Original strand, 8545600 - 8545760
Alignment:
| Q |
83 |
agtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttggattcccacttatgtccaccttattcttcttttgaaactcctctacaa |
182 |
Q |
| |
|
|||||||| |||||| ||||||| |||||||||||||||||||||||| ||| |||| ||| || ||| | || |||||| | | ||||||| |||| |
|
|
| T |
8545600 |
agtgtcctttttgccttctcacaggcagttctcaacctcctcaaggcttctgggttccgactaatatcctcattgttcttcctcttgaactccttcacaa |
8545699 |
T |
|
| Q |
183 |
agtagttcaccgttctgttatcaaagtcctctcccccaaggtgagtgtttccggcagtggc |
243 |
Q |
| |
|
|||| |||||| |||||||||||||||| || || || |||| ||||| ||| |||||||| |
|
|
| T |
8545700 |
agtaattcaccattctgttatcaaagtcttcaccgcctaggtaagtgtctccagcagtggc |
8545760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 8628611 - 8628689
Alignment:
| Q |
195 |
ttctgttatcaaagtcctctcccccaaggtgagtgtttccggcagtggcttttacctcaaaaacatcacccttaattgt |
273 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| ||||| ||||||||||| || ||||| |||||||| |||||||| |
|
|
| T |
8628611 |
ttctgttatcaaagtcctctccaccaaggtgagtatttccagcagtggctttaacttcaaagacatcacctttaattgt |
8628689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 173 - 271
Target Start/End: Complemental strand, 8636454 - 8636356
Alignment:
| Q |
173 |
tcctctacaaagtagttcaccgttctgttatcaaagtcctctcccccaaggtgagtgtttccggcagtggcttttacctcaaaaacatcacccttaatt |
271 |
Q |
| |
|
||||||||||| || | |||| |||||||||||||||||||||| |||||||| |||| ||||||||||||||| || ||||| || ||||| |||||| |
|
|
| T |
8636454 |
tcctctacaaaatattccaccattctgttatcaaagtcctctcctccaaggtgtgtgtctccggcagtggctttaacttcaaagacttcacctttaatt |
8636356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 83 - 228
Target Start/End: Complemental strand, 29582042 - 29581897
Alignment:
| Q |
83 |
agtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttggattcccacttatgtccaccttattcttcttttgaaactcctctacaa |
182 |
Q |
| |
|
||||||||||||||||||||||| || ||||||| | |||| || ||| |||| |||||||| ||||||| || |||||| | | ||||| | ||| |
|
|
| T |
29582042 |
agtgtcctctttgccctctcacaagctgttctcagcttccttaaagcttttgggttcccactaatgtccaaattgttcttcctcttcaactcattcgcaa |
29581943 |
T |
|
| Q |
183 |
agtagttcaccgttctgttatcaaagtcctctcccccaaggtgagt |
228 |
Q |
| |
|
|||| |||||| ||| |||||||||||||||||| || |||||||| |
|
|
| T |
29581942 |
agtaattcaccattcggttatcaaagtcctctcctcctaggtgagt |
29581897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 142
Target Start/End: Original strand, 17267843 - 17267965
Alignment:
| Q |
20 |
gaagaaaagtcaattccctgaaataaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacc |
119 |
Q |
| |
|
|||||||| |||| |||| |||||||| |||||||| ||| |||| ||| | || ||||| |||||||| ||||| | ||||||||||||||||||| |
|
|
| T |
17267843 |
gaagaaaaatcaacacccttaaataaagcgtctacctcaacattggtcacagaggcgaaagaaagtgtcctttttgctttttcacatgcagttctcaacc |
17267942 |
T |
|
| Q |
120 |
tcctcaaggctcttggattccca |
142 |
Q |
| |
|
|||||| |||| |||| |||||| |
|
|
| T |
17267943 |
tcctcatggcttttgggttccca |
17267965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 83 - 243
Target Start/End: Original strand, 8570278 - 8570438
Alignment:
| Q |
83 |
agtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttggattcccacttatgtccaccttattcttcttttgaaactcctctacaa |
182 |
Q |
| |
|
|||||||| |||||||||||||| || ||||| ||||||||||||||| |||| |||| ||| || ||| | || |||||||| | |||| || |||| |
|
|
| T |
8570278 |
agtgtcctttttgccctctcacaagctgttcttaacctcctcaaggcttttgggttcctactaatatcctcgttgttcttcttcttgaacttcttcacaa |
8570377 |
T |
|
| Q |
183 |
agtagttcaccgttctgttatcaaagtcctctcccccaaggtgagtgtttccggcagtggc |
243 |
Q |
| |
|
||| ||| | ||||||||||||| || || || || |||||||||| ||| |||||||| |
|
|
| T |
8570378 |
agtgagtcaacattctgttatcaaaatcttcacctcccaggtgagtgtctccagcagtggc |
8570438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 83 - 255
Target Start/End: Original strand, 8590605 - 8590777
Alignment:
| Q |
83 |
agtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttggattcccacttatgtccaccttattcttcttttgaaactcctctacaa |
182 |
Q |
| |
|
|||||||| || ||||||||||| || ||| |||||||||| | || |||| |||||||||| ||||| ||||||||| | |||||||| || | |
|
|
| T |
8590605 |
agtgtccttttagccctctcacaagctgttttcaacctcctaagagcccttgcgttcccacttaaatccactttattcttcctcctaaactccttcacca |
8590704 |
T |
|
| Q |
183 |
agtagttcaccgttctgttatcaaagtcctctcccccaaggtgagtgtttccggcagtggcttttacctcaaa |
255 |
Q |
| |
|
| | || ||| |||||||||||||||||||||| || ||||| || | ||||| |||||||||||| ||||| |
|
|
| T |
8590705 |
aatggtgaaccattctgttatcaaagtcctctcctcctaggtgggtatctccggaagtggcttttacatcaaa |
8590777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 269
Target Start/End: Complemental strand, 29577873 - 29577687
Alignment:
| Q |
83 |
agtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttggattcccacttatgtccaccttattcttcttttgaaactcctctacaa |
182 |
Q |
| |
|
|||| |||||||||||||||||| |||||||||| | |||| || ||| |||| ||| ||| |||||||| || |||||| | | ||||| | |||| |
|
|
| T |
29577873 |
agtgccctctttgccctctcacaagcagttctcagcttccttaaagcttttgggttcaaactaatgtccacattgttcttcctcttcaactcattcacaa |
29577774 |
T |
|
| Q |
183 |
agtagttcaccgttctgttatcaaagtcctctcccccaaggtgagtgtttccggcagtggcttttacctcaaaaacatcacccttaa |
269 |
Q |
| |
|
||| | ||||| || | ||||| ||||||||||| || |||||||| | || |||||||| ||||| |||||| |||| |||||| |
|
|
| T |
29577773 |
agtggctcaccattttattatcgaagtcctctcctcctaggtgagtatcaccagcagtggcctttacttcaaaactatcatccttaa |
29577687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 243
Target Start/End: Original strand, 8602037 - 8602101
Alignment:
| Q |
179 |
acaaagtagttcaccgttctgttatcaaagtcctctcccccaaggtgagtgtttccggcagtggc |
243 |
Q |
| |
|
||||||| ||||||| ||| |||||||||||||||||| |||||||| |||| ||||| |||||| |
|
|
| T |
8602037 |
acaaagtggttcaccattcggttatcaaagtcctctcctccaaggtgtgtgtctccggaagtggc |
8602101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 8559386 - 8559460
Alignment:
| Q |
169 |
aaactcctctacaaagtagttcaccgttctgttatcaaagtcctctcccccaaggtgagtgtttccggcagtggc |
243 |
Q |
| |
|
|||||| | |||||||| |||||| |||||||||||||||||||||| || ||||| |||| ||||| |||||| |
|
|
| T |
8559386 |
aaactcttttacaaagtgtttcaccattctgttatcaaagtcctctcctccgaggtgtgtgtctccggaagtggc |
8559460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 243
Target Start/End: Original strand, 8576293 - 8576453
Alignment:
| Q |
83 |
agtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttggattcccacttatgtccaccttattcttcttttgaaactcctctacaa |
182 |
Q |
| |
|
|||||||| |||||| | ||||| ||||||||||||||||| |||||| ||| |||| |||| || ||| | || | ||| || ||||||| |||| |
|
|
| T |
8576293 |
agtgtcctttttgccttttcacaagcagttctcaacctccttaaggcttttgaattctcactaatatcctctttgtacttgttcctgaactccttaacaa |
8576392 |
T |
|
| Q |
183 |
agtagttcaccgttctgttatcaaagtcctctcccccaaggtgagtgtttccggcagtggc |
243 |
Q |
| |
|
||| | |||| || ||||||||||||| | || || |||||||||| |||||||||||| |
|
|
| T |
8576393 |
agtgatccaccattatgttatcaaagtcttggcctcctaggtgagtgtctccggcagtggc |
8576453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 123
Target Start/End: Original strand, 8609884 - 8609924
Alignment:
| Q |
83 |
agtgtcctctttgccctctcacatgcagttctcaacctcct |
123 |
Q |
| |
|
||||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
8609884 |
agtgtcctctttgccctctcacaagcagtcctcaacctcct |
8609924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 243
Target Start/End: Original strand, 8538120 - 8538163
Alignment:
| Q |
200 |
ttatcaaagtcctctcccccaaggtgagtgtttccggcagtggc |
243 |
Q |
| |
|
||||||||||||||||| ||||||||||| | |||||||||||| |
|
|
| T |
8538120 |
ttatcaaagtcctctcctccaaggtgagtatctccggcagtggc |
8538163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 243
Target Start/End: Complemental strand, 8383077 - 8382917
Alignment:
| Q |
83 |
agtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttggattcccacttatgtccaccttattcttcttttgaaactcctctacaa |
182 |
Q |
| |
|
|||||||| ||||||||||| || || ||||| ||||| || | || |||| |||||||| |||||| |||| |||| | | ||||| || |||| |
|
|
| T |
8383077 |
agtgtcctttttgccctctcgcaagccgttcttaaccttctaagagcctttgggttcccactaatgtccttattatgcttcctcttgaactcgtcaacaa |
8382978 |
T |
|
| Q |
183 |
agtagttcaccgttctgttatcaaagtcctctcccccaaggtgagtgtttccggcagtggc |
243 |
Q |
| |
|
|||| ||||| |||||||||| ||||| || || || || ||||||| |||||||||||| |
|
|
| T |
8382977 |
agtacttcacgattctgttatctaagtcttcacctcctagatgagtgtctccggcagtggc |
8382917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 145; Significance: 2e-76; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 20 - 276
Target Start/End: Complemental strand, 4678821 - 4678566
Alignment:
| Q |
20 |
gaagaaaagtcaattccctgaaataaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacc |
119 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| || |||||||||||||| || |||||||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
4678821 |
gaagaaaagtctattccctgaaataaagaatctac-tcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacc |
4678723 |
T |
|
| Q |
120 |
tcctcaaggctcttggattcccacttatgtccaccttattcttcttttgaaactcctctacaaagtagttcaccgttctgttatcaaagtcctctccccc |
219 |
Q |
| |
|
|||| |||| | ||| ||| ||| |||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| || |
|
|
| T |
4678722 |
tccttaagggttttgcgttcttactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctccacc |
4678623 |
T |
|
| Q |
220 |
aaggtgagtgtttccggcagtggcttttacctcaaaaacatcacccttaattgtaag |
276 |
Q |
| |
|
|||||||||||||| |||||||||||||| ||||| ||| ||||||| ||| |||| |
|
|
| T |
4678622 |
taggtgagtgtttccagcagtggcttttacttcaaagacaccacccttgattttaag |
4678566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 26 - 235
Target Start/End: Original strand, 15594944 - 15595153
Alignment:
| Q |
26 |
aagtcaattccctgaaataaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctca |
125 |
Q |
| |
|
|||||||| || | ||||||| |||||||||| | || |||||| || |||||||||| ||| |||||||| || || ||||||||||| ||||||| |
|
|
| T |
15594944 |
aagtcaataccgttaaataaacaatctacctcaatggtagtgacagtagtaaaagagagtaccctttttgccctttcgcacgcagttctcaatctcctca |
15595043 |
T |
|
| Q |
126 |
aggctcttggattcccacttatgtccaccttattcttcttttgaaactcctctacaaagtagttcaccgttctgttatcaaagtcctctcccccaaggtg |
225 |
Q |
| |
|
|||| ||||| |||||| | || ||||| || |||||| | | || |||| |||||||||| ||| |||||||||||||||||||||| |||||||| |
|
|
| T |
15595044 |
aggcccttgggttcccagtaatatccactttgttcttcgtcttgaattcctgcgcaaagtagttgaccattctgttatcaaagtcctctcctccaaggtg |
15595143 |
T |
|
| Q |
226 |
agtgtttccg |
235 |
Q |
| |
|
|||||||||| |
|
|
| T |
15595144 |
agtgtttccg |
15595153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 81 - 276
Target Start/End: Complemental strand, 34466996 - 34466801
Alignment:
| Q |
81 |
agagtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttggattcccacttatgtccaccttattcttcttttgaaactcctctac |
180 |
Q |
| |
|
|||||||||||||||| |||| || |||||||||||||||||||| ||||| || || ||||| || ||| |||| |||| | | ||||||| | | |
|
|
| T |
34466996 |
agagtgtcctctttgcattctcgcacgcagttctcaacctcctcaaagctctagggtttccactaatatccttattatgcttcctcttgaactcctttgc |
34466897 |
T |
|
| Q |
181 |
aaagtagttcaccgttctgttatcaaagtcctctcccccaaggtgagtgtttccggcagtggcttttacctcaaaaacatcacccttaattgtaag |
276 |
Q |
| |
|
||||| |||| || |||| |||||||||||||||| || ||||||||||| || | |||||| || || ||||| |||| | ||||||||||||| |
|
|
| T |
34466896 |
aaagtggttcgccattctattatcaaagtcctctcgtccgaggtgagtgttaccagaagtggccttaacttcaaagacattatccttaattgtaag |
34466801 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 114; Significance: 7e-58; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 20 - 273
Target Start/End: Complemental strand, 9336155 - 9335902
Alignment:
| Q |
20 |
gaagaaaagtcaattccctgaaataaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacc |
119 |
Q |
| |
|
||||||||||| |||||| |||||||| ||||||||| |||||||| |||||||||||||| ||| |||| |||||||||||||| ||||||||||||| |
|
|
| T |
9336155 |
gaagaaaagtcgattcccataaataaagcatctacctcaacagtggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacc |
9336056 |
T |
|
| Q |
120 |
tcctcaaggctcttggattcccacttatgtccaccttattcttcttttgaaactcctctacaaagtagttcaccgttctgttatcaaagtcctctccccc |
219 |
Q |
| |
|
|||| |||| | |||| ||| | |||||||| ||||||||||||| ||||| || ||||| ||||| ||| ||||||||||||||||||| || || |
|
|
| T |
9336055 |
tccttaaggattttgggttctgcttgatgtccactttattcttcttttttaactcttccacaaaatagttaaccattctgttatcaaagtcctcgcctcc |
9335956 |
T |
|
| Q |
220 |
aaggtgagtgtttccggcagtggcttttacctcaaaaacatcacccttaattgt |
273 |
Q |
| |
|
|||||| |||||||| || ||||||||||| ||||| | ||||||||||||||| |
|
|
| T |
9335955 |
aaggtgcgtgtttcctgcggtggcttttacttcaaatagatcacccttaattgt |
9335902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 80 - 262
Target Start/End: Original strand, 30775216 - 30775398
Alignment:
| Q |
80 |
gagagtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttggattcccacttatgtccaccttattcttcttttgaaactcctcta |
179 |
Q |
| |
|
||||||||||| |||||| | |||||||||||||||||| ||||| |||||||||||||| | |||||||| || |||||| | | ||| ||||||| |
|
|
| T |
30775216 |
gagagtgtcctttttgccttttcacatgcagttctcaactgtctcaaagctcttggattcccggtaatgtccacgttgttcttcgtcttaaattcctcta |
30775315 |
T |
|
| Q |
180 |
caaagtagttcaccgttctgttatcaaagtcctctcccccaaggtgagtgtttccggcagtggcttttacctcaaaaacatca |
262 |
Q |
| |
|
||||||| |||| | ||||||||||||||||||||||||| | |||||||||||| ||||| ||||| || ||||| |||||| |
|
|
| T |
30775316 |
caaagtaattcaacattctgttatcaaagtcctctcccccgatgtgagtgtttccagcagttgctttaacttcaaacacatca |
30775398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 122 - 243
Target Start/End: Original strand, 35132454 - 35132575
Alignment:
| Q |
122 |
ctcaaggctcttggattcccacttatgtccaccttattctt-cttttgaaactcctctacaaagtagttcaccgttctgttatcaaagtcctctccccca |
220 |
Q |
| |
|
||||||||| ||| ||||||||| ||||| || || ||||| || ||||| ||| | |||||||||||||||| |||||||||||||||||||||| || |
|
|
| T |
35132454 |
ctcaaggcttttgaattcccactaatgtctactttgttctttctcttgaa-ctcttgtacaaagtagttcaccattctgttatcaaagtcctctccaccg |
35132552 |
T |
|
| Q |
221 |
aggtgagtgtttccggcagtggc |
243 |
Q |
| |
|
|| |||||||||||||||||||| |
|
|
| T |
35132553 |
agatgagtgtttccggcagtggc |
35132575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 29 - 234
Target Start/End: Original strand, 43744729 - 43744934
Alignment:
| Q |
29 |
tcaattccctgaaataaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctcaagg |
128 |
Q |
| |
|
||||| |||| |||||||||||||||||| | ||||||||||| ||||||||| | |||||| ||||| || || ||||| |||||||||||||| || | |
|
|
| T |
43744729 |
tcaatgccctcaaataaagaatctacctcaatagtggtgacaacagcaaaagataatgtcctttttgctctttcgcatgctgttctcaacctccttaatg |
43744828 |
T |
|
| Q |
129 |
ctcttggattcccacttatgtccaccttattcttcttttgaaactcctctacaaagtagttcaccgttctgttatcaaagtcctctcccccaaggtgagt |
228 |
Q |
| |
|
||||||| || ||| | ||||||||||| |||||||| | |||||||||| | |||||||||||| | || |||||||| |||||||| || |||||||| |
|
|
| T |
43744829 |
ctcttgggtttccagtaatgtccaccttgttcttcttcttaaactcctctgcgaagtagttcaccatcctattatcaaaatcctctcctccgaggtgagt |
43744928 |
T |
|
| Q |
229 |
gtttcc |
234 |
Q |
| |
|
|||||| |
|
|
| T |
43744929 |
gtttcc |
43744934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 243
Target Start/End: Original strand, 12528497 - 12528631
Alignment:
| Q |
109 |
agttctcaacctcctcaaggctcttggattcccacttatgtccaccttattcttcttttgaaactcctctacaaagtagttcaccgttctgttatcaaag |
208 |
Q |
| |
|
||||||||| ||||| | |||| ||| |||||| | ||||| || || |||||| | | |||||| | ||||||| |||||| ||| ||||||||| |
|
|
| T |
12528497 |
agttctcaatctccttagggcttttgagttcccaataatgtcaactttgttcttcctcttaaactctttcacaaagtgattcaccattcgattatcaaag |
12528596 |
T |
|
| Q |
209 |
tcctctcccccaaggtgagtgtttccggcagtggc |
243 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||||| |
|
|
| T |
12528597 |
tcctctcctccaaggtgagtgtctccggcagtggc |
12528631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 40 - 243
Target Start/End: Original strand, 28219842 - 28220045
Alignment:
| Q |
40 |
aaataaagaatctacctctacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttggattc |
139 |
Q |
| |
|
|||||||||||||||||| | |||| ||||| ||||||||| |||||||| ||||| |||| || || |||||||||||||| |||||||||| || |
|
|
| T |
28219842 |
aaataaagaatctacctcaatggtggcgacaacagcaaaagatagtgtcctttttgctctcttgcacgctgttctcaacctccttaaggctcttgagttt |
28219941 |
T |
|
| Q |
140 |
ccacttatgtccaccttattcttcttttgaaactcctctacaaagtagttcaccgttctgttatcaaagtcctctcccccaaggtgagtgtttccggcag |
239 |
Q |
| |
|
||| | ||||||||||| |||||||| | |||||||||| | |||||||||||| | || ||||||||||||||||||| |||||||||||||| || | |
|
|
| T |
28219942 |
ccagtaatgtccaccttgttcttcttcttaaactcctctgcgaagtagttcaccatcctactatcaaagtcctctcccccgaggtgagtgtttccagcgg |
28220041 |
T |
|
| Q |
240 |
tggc |
243 |
Q |
| |
|
|||| |
|
|
| T |
28220042 |
tggc |
28220045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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