View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8563_high_12 (Length: 239)
Name: NF8563_high_12
Description: NF8563
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8563_high_12 |
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Alignment Details
Target: chr8 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 37497373 - 37497593
Alignment:
| Q |
1 |
tgttatgctaaagtttcnnnnnnnnggtgttttacttatctgggttgtgttcatttgcagggaaagttgatggaggatcaagaacaaaggaagaagagaa |
100 |
Q |
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| T |
37497373 |
tgttatgctaaagtttcttttttttggtgttttacttatctgggttgtgttcatttgcagggaaagttgatggaggatcaagaacaaaggaagaagagaa |
37497472 |
T |
|
| Q |
101 |
agtgtactcttggttatatacactggctcagtctgnnnnnnncttggtctttgagtatgttagatccactgaaagaggcaagtatctgcattctacaata |
200 |
Q |
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||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
37497473 |
agtgtactcttggttatatacactggctcagtctgaaaaaaacttggtctttgagtatgttagatccactgaaagaggcaattatctgcattctacaata |
37497572 |
T |
|
| Q |
201 |
ctactttatcaatgaactttg |
221 |
Q |
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||||||||||||||||||||| |
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| T |
37497573 |
ctactttatcaatgaactttg |
37497593 |
T |
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