View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8563_low_21 (Length: 250)
Name: NF8563_low_21
Description: NF8563
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8563_low_21 |
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Alignment Details
Target: chr2 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 20 - 239
Target Start/End: Complemental strand, 36332957 - 36332741
Alignment:
| Q |
20 |
gttgtagctgaagattctgctgatccatattattattattatgatctgatgaaaaagaagatgcttttttactacttaagggtgattctggctcaaaagg |
119 |
Q |
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| T |
36332957 |
gttgtagctgaagattctgctgatccatattattattat---gatctgatgaaaaagaagatgcttttttactacttaagggtgattctggctcaaaagg |
36332861 |
T |
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| Q |
120 |
gttctcatttttgcttgatagtgctgaatcactgctttcacctcctgatttgttaccacctccctgtatttccaaatacaaatcattagtatattcaaat |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36332860 |
gttctcatttttgcttgatagtgctgaatcactgctttcacctcctgatttgttaccacctccctgtatttccaaatacaaatcattagtatattcaaat |
36332761 |
T |
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| Q |
220 |
atataatttaatcggttcat |
239 |
Q |
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||||||||||||||| |||| |
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| T |
36332760 |
atataatttaatcggctcat |
36332741 |
T |
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