View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8564_low_2 (Length: 410)

Name: NF8564_low_2
Description: NF8564
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8564_low_2
NF8564_low_2
[»] chr8 (34 HSPs)
chr8 (87-393)||(18147455-18147760)
chr8 (2-122)||(13576990-13577110)
chr8 (95-159)||(24023802-24023866)
chr8 (84-159)||(13357431-13357506)
chr8 (84-159)||(17704009-17704084)
chr8 (86-128)||(13004163-13004205)
chr8 (87-128)||(15001296-15001337)
chr8 (79-148)||(29376892-29376961)
chr8 (95-148)||(32944841-32944894)
chr8 (84-128)||(17693269-17693313)
chr8 (87-151)||(34420860-34420924)
chr8 (84-159)||(6314313-6314388)
chr8 (86-137)||(15188897-15188948)
chr8 (84-159)||(25136834-25136909)
chr8 (84-135)||(26886056-26886107)
chr8 (84-159)||(42113617-42113692)
chr8 (81-159)||(498724-498802)
chr8 (86-128)||(8461857-8461899)
chr8 (86-159)||(8148417-8148490)
chr8 (87-148)||(11040420-11040480)
chr8 (84-137)||(33373764-33373817)
chr8 (84-137)||(38763527-38763580)
chr8 (95-128)||(40399988-40400021)
chr8 (98-135)||(43240344-43240381)
chr8 (94-147)||(43778025-43778078)
chr8 (84-137)||(44293571-44293624)
chr8 (84-128)||(6447185-6447229)
chr8 (84-128)||(8137931-8137975)
chr8 (70-134)||(10601745-10601809)
chr8 (84-148)||(11708982-11709046)
chr8 (84-128)||(21557429-21557473)
chr8 (84-128)||(29499767-29499811)
chr8 (88-128)||(32051553-32051593)
chr8 (84-128)||(37999441-37999485)
[»] chr5 (35 HSPs)
chr5 (84-132)||(8543572-8543620)
chr5 (84-128)||(11637593-11637637)
chr5 (85-135)||(17046331-17046381)
chr5 (85-127)||(29178444-29178486)
chr5 (84-128)||(22555227-22555271)
chr5 (84-128)||(28207128-28207172)
chr5 (84-128)||(34191429-34191473)
chr5 (84-128)||(35270702-35270746)
chr5 (86-137)||(3389160-3389211)
chr5 (86-137)||(11310463-11310514)
chr5 (85-132)||(26034625-26034672)
chr5 (93-152)||(33014241-33014300)
chr5 (84-134)||(3156530-3156580)
chr5 (86-128)||(10032295-10032337)
chr5 (77-127)||(18995633-18995683)
chr5 (86-128)||(20688038-20688080)
chr5 (84-122)||(31561371-31561409)
chr5 (85-135)||(31877925-31877975)
chr5 (86-128)||(41650960-41651002)
chr5 (79-128)||(1808614-1808663)
chr5 (84-137)||(24408491-24408544)
chr5 (87-132)||(34702489-34702534)
chr5 (84-148)||(689543-689607)
chr5 (79-127)||(10199010-10199058)
chr5 (88-128)||(10704352-10704392)
chr5 (84-128)||(17708070-17708114)
chr5 (84-128)||(18589888-18589932)
chr5 (84-128)||(29695011-29695055)
chr5 (84-128)||(31198705-31198749)
chr5 (84-128)||(32858666-32858710)
chr5 (84-128)||(33645710-33645754)
chr5 (84-128)||(37932326-37932370)
chr5 (88-128)||(38495142-38495182)
chr5 (84-128)||(39980504-39980548)
chr5 (84-128)||(40837924-40837968)
[»] chr2 (38 HSPs)
chr2 (81-135)||(10109660-10109714)
chr2 (84-134)||(18789411-18789461)
chr2 (84-159)||(10723935-10724010)
chr2 (84-127)||(22558973-22559016)
chr2 (84-127)||(29798539-29798582)
chr2 (84-138)||(36193955-36194009)
chr2 (84-137)||(2256967-2257020)
chr2 (84-128)||(34977200-34977244)
chr2 (94-158)||(41859858-41859922)
chr2 (84-135)||(17736789-17736840)
chr2 (85-128)||(37133001-37133044)
chr2 (84-159)||(45032689-45032764)
chr2 (84-122)||(14414922-14414960)
chr2 (84-126)||(27017533-27017575)
chr2 (94-148)||(30929046-30929100)
chr2 (84-138)||(42475121-42475175)
chr2 (74-135)||(17413346-17413407)
chr2 (84-128)||(4226992-4227036)
chr2 (84-128)||(7201503-7201547)
chr2 (84-128)||(8761585-8761629)
chr2 (84-128)||(9383230-9383274)
chr2 (84-128)||(9842223-9842267)
chr2 (84-128)||(11428871-11428915)
chr2 (84-128)||(13196696-13196740)
chr2 (84-132)||(13787547-13787595)
chr2 (88-136)||(18324907-18324955)
chr2 (78-138)||(30019913-30019973)
chr2 (78-138)||(30040722-30040782)
chr2 (78-138)||(30110200-30110260)
chr2 (78-138)||(30234860-30234920)
chr2 (86-122)||(34685991-34686027)
chr2 (86-122)||(34708412-34708448)
chr2 (84-120)||(39340278-39340314)
chr2 (84-128)||(40365427-40365471)
chr2 (84-128)||(41187478-41187522)
chr2 (96-148)||(41748757-41748809)
chr2 (84-128)||(44597840-44597884)
chr2 (84-128)||(45314786-45314830)
[»] chr1 (39 HSPs)
chr1 (93-159)||(30382501-30382567)
chr1 (84-128)||(13590106-13590150)
chr1 (84-128)||(15668494-15668538)
chr1 (84-147)||(23334584-23334647)
chr1 (84-159)||(42045362-42045437)
chr1 (84-127)||(44860905-44860948)
chr1 (84-122)||(8266213-8266251)
chr1 (78-128)||(11701956-11702006)
chr1 (88-134)||(47340787-47340833)
chr1 (84-146)||(52267760-52267822)
chr1 (85-130)||(30895331-30895376)
chr1 (84-128)||(2613718-2613762)
chr1 (84-128)||(50040352-50040396)
chr1 (84-147)||(13673541-13673604)
chr1 (84-127)||(32007619-32007662)
chr1 (88-127)||(33153620-33153659)
chr1 (84-135)||(43840339-43840390)
chr1 (84-159)||(47417779-47417854)
chr1 (86-128)||(10356204-10356246)
chr1 (85-131)||(21041341-21041387)
chr1 (88-134)||(23524824-23524870)
chr1 (82-128)||(49875620-49875666)
chr1 (85-122)||(2636782-2636819)
chr1 (94-159)||(6000133-6000198)
chr1 (87-128)||(14520943-14520984)
chr1 (85-122)||(29451009-29451046)
chr1 (87-128)||(42888574-42888615)
chr1 (84-121)||(47692933-47692970)
chr1 (84-128)||(12872150-12872194)
chr1 (84-128)||(16826350-16826394)
chr1 (88-128)||(20371842-20371882)
chr1 (84-128)||(20481096-20481140)
chr1 (88-128)||(25086483-25086523)
chr1 (84-128)||(26803472-26803516)
chr1 (84-128)||(30678834-30678878)
chr1 (99-147)||(32923829-32923877)
chr1 (84-159)||(39452456-39452532)
chr1 (88-128)||(48100722-48100762)
chr1 (84-128)||(49843430-49843474)
[»] chr7 (48 HSPs)
chr7 (84-128)||(10025990-10026034)
chr7 (79-128)||(48103695-48103744)
chr7 (84-128)||(19626546-19626590)
chr7 (84-128)||(21993178-21993222)
chr7 (84-128)||(34448631-34448675)
chr7 (84-128)||(40808180-40808224)
chr7 (93-132)||(44770160-44770199)
chr7 (78-128)||(19416504-19416554)
chr7 (81-159)||(19578127-19578205)
chr7 (84-137)||(24839484-24839537)
chr7 (84-137)||(35103492-35103545)
chr7 (84-124)||(4227553-4227593)
chr7 (84-128)||(4905272-4905316)
chr7 (84-128)||(6023305-6023349)
chr7 (84-128)||(7388060-7388104)
chr7 (84-140)||(8683066-8683122)
chr7 (84-128)||(18378398-18378442)
chr7 (84-128)||(27993050-27993094)
chr7 (84-128)||(44454508-44454552)
chr7 (84-128)||(47342455-47342499)
chr7 (84-128)||(47342673-47342717)
chr7 (84-135)||(580940-580991)
chr7 (88-159)||(2450580-2450651)
chr7 (84-135)||(39801702-39801753)
chr7 (84-138)||(768117-768171)
chr7 (84-122)||(8883549-8883587)
chr7 (85-135)||(18505671-18505721)
chr7 (86-128)||(36428146-36428188)
chr7 (84-137)||(5041335-5041388)
chr7 (85-138)||(7791897-7791950)
chr7 (87-128)||(27263340-27263381)
chr7 (87-128)||(27270234-27270275)
chr7 (86-123)||(46220976-46221013)
chr7 (84-128)||(1079713-1079757)
chr7 (84-148)||(1399158-1399222)
chr7 (84-128)||(10244723-10244767)
chr7 (93-149)||(21928118-21928174)
chr7 (88-128)||(22991412-22991452)
chr7 (84-128)||(23198770-23198814)
chr7 (92-128)||(23413067-23413103)
chr7 (84-128)||(24226002-24226046)
chr7 (84-128)||(35224114-35224158)
chr7 (84-124)||(38728204-38728244)
chr7 (88-128)||(44406877-44406917)
chr7 (84-128)||(46207756-46207800)
chr7 (84-132)||(46551991-46552039)
chr7 (84-128)||(46737781-46737825)
chr7 (84-128)||(47589574-47589618)
[»] chr6 (31 HSPs)
chr6 (84-147)||(9677231-9677294)
chr6 (84-128)||(3358387-3358431)
chr6 (84-128)||(12735264-12735308)
chr6 (85-128)||(2108722-2108765)
chr6 (88-135)||(24167904-24167951)
chr6 (86-128)||(17935727-17935769)
chr6 (86-135)||(2655041-2655090)
chr6 (84-157)||(28898852-28898925)
chr6 (84-128)||(4494892-4494936)
chr6 (82-122)||(8831201-8831241)
chr6 (84-128)||(16890469-16890513)
chr6 (84-127)||(5271389-5271432)
chr6 (85-148)||(9367398-9367461)
chr6 (85-128)||(30579856-30579899)
chr6 (86-132)||(5937630-5937676)
chr6 (93-159)||(6864123-6864189)
chr6 (86-128)||(7885539-7885581)
chr6 (86-128)||(20847532-20847574)
chr6 (86-128)||(26320584-26320626)
chr6 (99-128)||(1428805-1428834)
chr6 (84-137)||(20744134-20744187)
chr6 (84-152)||(331883-331951)
chr6 (88-128)||(361754-361794)
chr6 (84-128)||(2726438-2726482)
chr6 (84-148)||(7082993-7083057)
chr6 (84-128)||(12333589-12333633)
chr6 (84-120)||(17278966-17279002)
chr6 (84-128)||(21296754-21296798)
chr6 (84-128)||(28951395-28951439)
chr6 (84-128)||(31895285-31895328)
chr6 (84-128)||(32053784-32053828)
[»] chr4 (45 HSPs)
chr4 (84-159)||(43034332-43034407)
chr4 (88-128)||(30848003-30848043)
chr4 (93-159)||(13434891-13434957)
chr4 (93-147)||(50772592-50772646)
chr4 (86-159)||(29908054-29908127)
chr4 (84-128)||(7030914-7030958)
chr4 (84-128)||(9946423-9946467)
chr4 (84-148)||(12588841-12588905)
chr4 (84-128)||(24885821-24885865)
chr4 (87-127)||(30780128-30780168)
chr4 (84-128)||(38340341-38340385)
chr4 (84-128)||(51002283-51002327)
chr4 (84-135)||(10303525-10303576)
chr4 (86-137)||(16431614-16431665)
chr4 (93-128)||(34303492-34303527)
chr4 (84-138)||(2186344-2186398)
chr4 (84-134)||(4916151-4916201)
chr4 (86-148)||(12757297-12757359)
chr4 (93-127)||(30026232-30026266)
chr4 (86-148)||(40070969-40071031)
chr4 (86-128)||(55421590-55421632)
chr4 (84-137)||(11198760-11198813)
chr4 (93-150)||(36638623-36638680)
chr4 (84-137)||(52132314-52132367)
chr4 (84-137)||(52270042-52270095)
chr4 (84-128)||(1756971-1757015)
chr4 (79-159)||(7230271-7230351)
chr4 (84-128)||(8020668-8020712)
chr4 (84-128)||(9539214-9539258)
chr4 (84-148)||(9913895-9913959)
chr4 (84-148)||(13121540-13121604)
chr4 (84-128)||(14202500-14202544)
chr4 (84-128)||(15170120-15170164)
chr4 (84-128)||(15849230-15849274)
chr4 (84-128)||(19588150-19588194)
chr4 (84-128)||(21991268-21991312)
chr4 (84-128)||(32180826-32180870)
chr4 (84-136)||(32430136-32430188)
chr4 (84-128)||(35287528-35287572)
chr4 (87-159)||(38374956-38375028)
chr4 (84-128)||(39171391-39171435)
chr4 (84-128)||(39842033-39842077)
chr4 (84-128)||(43374293-43374337)
chr4 (84-128)||(43722761-43722805)
chr4 (86-138)||(44221445-44221497)
[»] chr3 (39 HSPs)
chr3 (84-159)||(32843252-32843327)
chr3 (85-135)||(14827522-14827572)
chr3 (84-138)||(47943294-47943348)
chr3 (84-137)||(21506770-21506823)
chr3 (93-134)||(44968182-44968223)
chr3 (84-128)||(7738665-7738709)
chr3 (84-128)||(8127459-8127503)
chr3 (84-128)||(25340945-25340989)
chr3 (84-128)||(28244125-28244169)
chr3 (84-128)||(44579632-44579676)
chr3 (87-135)||(51882214-51882262)
chr3 (84-159)||(10498685-10498760)
chr3 (85-128)||(32909322-32909365)
chr3 (84-159)||(51250223-51250298)
chr3 (93-151)||(544759-544817)
chr3 (84-122)||(7557561-7557599)
chr3 (87-137)||(17588361-17588411)
chr3 (86-128)||(23316386-23316428)
chr3 (84-138)||(30912827-30912881)
chr3 (86-128)||(32836171-32836213)
chr3 (84-134)||(39481137-39481187)
chr3 (85-122)||(25874127-25874164)
chr3 (94-135)||(32484284-32484325)
chr3 (87-128)||(32629079-32629120)
chr3 (98-151)||(43399160-43399213)
chr3 (79-128)||(54018427-54018476)
chr3 (93-137)||(2153513-2153557)
chr3 (85-137)||(2186439-2186491)
chr3 (84-128)||(3100217-3100261)
chr3 (84-128)||(7464512-7464556)
chr3 (88-128)||(9321426-9321466)
chr3 (87-135)||(10922322-10922370)
chr3 (88-128)||(19468451-19468491)
chr3 (84-128)||(20370302-20370346)
chr3 (84-148)||(26768397-26768461)
chr3 (88-128)||(38130980-38131020)
chr3 (84-128)||(46903904-46903948)
chr3 (84-128)||(48796239-48796283)
chr3 (84-128)||(53365900-53365944)
[»] scaffold0011 (2 HSPs)
scaffold0011 (84-158)||(185259-185333)
scaffold0011 (84-134)||(223154-223204)
[»] scaffold0012 (1 HSPs)
scaffold0012 (84-148)||(118815-118879)
[»] scaffold0118 (1 HSPs)
scaffold0118 (84-128)||(45408-45452)
[»] scaffold0062 (1 HSPs)
scaffold0062 (85-137)||(7471-7523)
[»] scaffold0021 (1 HSPs)
scaffold0021 (88-128)||(161141-161181)
[»] scaffold0031 (1 HSPs)
scaffold0031 (86-137)||(47253-47304)
[»] scaffold0006 (2 HSPs)
scaffold0006 (84-147)||(171155-171218)
scaffold0006 (84-122)||(208938-208976)
[»] scaffold0009 (1 HSPs)
scaffold0009 (84-122)||(189618-189656)
[»] scaffold0735 (1 HSPs)
scaffold0735 (87-128)||(1527-1568)
[»] scaffold0050 (1 HSPs)
scaffold0050 (84-137)||(53392-53445)
[»] scaffold0458 (1 HSPs)
scaffold0458 (84-159)||(11141-11217)
[»] scaffold0069 (1 HSPs)
scaffold0069 (88-128)||(50996-51036)


Alignment Details
Target: chr8 (Bit Score: 189; Significance: 1e-102; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 87 - 393
Target Start/End: Original strand, 18147455 - 18147760
Alignment:
Q  87 cgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacctcggtcaccacnnnnnnnnnnnnnnnnngaacacgtct 186  Q
    ||||| |||| |||| |||||||||||||||||||||||||||||||||||  |||||||| |||| ||||||                  |||| ||||    
T  18147455 cgtgagcttagctcaattggtttggacaatgcataaaatatgaaagatctgggattcaaacatcggccaccacaaaaaaaaaaaaaaaa--aacatgtct 18147552  T
Q  187 atgtattatagtgatgggtcatcaatagggtaaaaatgtaaatttttaaagagataaaagaccaatgtagacaaacgataaacttaaaa-accatggatg 285  Q
    |||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18147553 atgtattaaagcgatgggtcatcaatagggtaacaatgtaaatttttaaagagataaaagaccaatgtagacaaacgataaacttaaaagaccatggatg 18147652  T
Q  286 catttgacctttttatttccttgcaatttattgaaattcagtacaacatattttattcgagactcatactattttccatgttgctctaacaacgaggaaa 385  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18147653 catttgacctttttatttccttgcaatttcttgaaattcagtacaacatattttattcgagactcgtactattttccatgttgctctaacaacgaggaaa 18147752  T
Q  386 gaagcaac 393  Q
    ||||||||    
T  18147753 gaagcaac 18147760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 2 - 122
Target Start/End: Original strand, 13576990 - 13577110
Alignment:
Q  2 aaagaggagtaaagtagtttaggtattttcaaattgttttgtaacactatcgcaactcaattaaacgctgatttagagttgccctcgtgatcttaactca 101  Q
    ||||||||||||||||||||||  |||||||||||||||||||| || ||| ||||||| ||||||||||||||||||||| |||| ||| |||||||||    
T  13576990 aaagaggagtaaagtagtttagacattttcaaattgttttgtaaaacgatcacaactcatttaaacgctgatttagagttgtcctcctgagcttaactca 13577089  T
Q  102 gttggtttggacaatgcataa 122  Q
    |||||| ||||||||||||||    
T  13577090 gttggtatggacaatgcataa 13577110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 95 - 159
Target Start/End: Complemental strand, 24023866 - 24023802
Alignment:
Q  95 taactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacctcggtcaccac 159  Q
    ||||||||||||| |||||||||||||||||||| ||| ||||   |||||||||| ||||||||    
T  24023866 taactcagttggtatggacaatgcataaaatatgcaaggtctggtgttcaaacctctgtcaccac 24023802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 13357506 - 13357431
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacctcggtcaccac 159  Q
    |||||||| ||||||||||||||| |||||||||||||| ||||| ||| |  ||  |||||||||||| ||||||    
T  13357506 cctcgtgagcttaactcagttggtatggacaatgcataatatatgcaaggtacgaggttcaaacctcggccaccac 13357431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 84 - 159
Target Start/End: Original strand, 17704009 - 17704084
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacctcggtcaccac 159  Q
    |||||||| |||| ||||||||||  ||||||||||||| ||||| ||| ||||  ||||||||||||| ||||||    
T  17704009 cctcgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggtctgtgattcaaacctcggccaccac 17704084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 128
Target Start/End: Original strand, 13004163 - 13004205
Alignment:
Q  86 tcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||| ||||||||||||||| ||||||||||||||||||||    
T  13004163 tcgtgagcttaactcagttggtatggacaatgcataaaatatg 13004205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 15001337 - 15001296
Alignment:
Q  87 cgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    ||||| ||||||||||||||||| ||||||||||||||||||    
T  15001337 cgtgagcttaactcagttggtttcgacaatgcataaaatatg 15001296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 79 - 148
Target Start/End: Original strand, 29376892 - 29376961
Alignment:
Q  79 gttgccctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacc 148  Q
    |||| |||||||| ||||||||||||||| |||||||||| ||| ||||| ||| |||| | ||||||||    
T  29376892 gttgtcctcgtgagcttaactcagttggtatggacaatgcgtaatatatgcaaggtctggagttcaaacc 29376961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 95 - 148
Target Start/End: Complemental strand, 32944894 - 32944841
Alignment:
Q  95 taactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacc 148  Q
    ||||||||||||| |||||||||||||||||||| ||| |||||  ||||||||    
T  32944894 taactcagttggtatggacaatgcataaaatatgcaaggtctgaggttcaaacc 32944841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 17693269 - 17693313
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||||||||||||||| |||||| ||||||||||||    
T  17693269 cctcgtgagcttaactcagttggttgggacaacgcataaaatatg 17693313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 151
Target Start/End: Complemental strand, 34420924 - 34420860
Alignment:
Q  87 cgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacctcg 151  Q
    ||||| ||||||||| ||||| |||||||||||||||||||| ||| | |||  |||||||||||    
T  34420924 cgtgagcttaactcaattggtatggacaatgcataaaatatgcaaggtttgaggttcaaacctcg 34420860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 6314388 - 6314313
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacctcggtcaccac 159  Q
    |||||||| |||| |||||||| |  ||||||||||||||||||| ||| || ||||||| |||| ||| ||||||    
T  6314388 cctcgtgagcttagctcagttgataaggacaatgcataaaatatgcaaggtccgaaattcgaaccccggccaccac 6314313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 86 - 137
Target Start/End: Original strand, 15188897 - 15188948
Alignment:
Q  86 tcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctg 137  Q
    |||||| |||||||||||| || |||||||||||||| ||||| ||||||||    
T  15188897 tcgtgagcttaactcagttagtatggacaatgcataatatatgtaagatctg 15188948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 25136909 - 25136834
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacctcggtcaccac 159  Q
    |||||||| | || |||||||||| ||||||| |||||||||||| ||| || ||  |||||||||||| ||||||    
T  25136909 cctcgtgagcatagctcagttggtatggacaaggcataaaatatgcaaggtccgaggttcaaacctcggccaccac 25136834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 26886107 - 26886056
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatc 135  Q
    ||||||||  |||||| ||||||| |||||||||||||||||||| ||||||    
T  26886107 cctcgtgagtttaacttagttggtatggacaatgcataaaatatgtaagatc 26886056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 42113692 - 42113617
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacctcggtcaccac 159  Q
    |||||||| |||| |||| || ||||||| ||||||||||||||| ||||| |  | ||||||| |||||||||||    
T  42113692 cctcgtgagcttagctcaattagtttggataatgcataaaatatgcaagatttagagttcaaacttcggtcaccac 42113617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 81 - 159
Target Start/End: Original strand, 498724 - 498802
Alignment:
Q  81 tgccctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacctcggtcaccac 159  Q
    |||||||||||  ||| |||||||||| |||||||||||||| ||||| ||| ||||   || ||||||||| ||||||    
T  498724 tgccctcgtgaggttatctcagttggtatggacaatgcataatatatgcaaggtctgtggtttaaacctcggacaccac 498802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 128
Target Start/End: Complemental strand, 8461899 - 8461857
Alignment:
Q  86 tcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||| |||| ||||||||||| |||||||||||||||||||    
T  8461899 tcgtgagcttagctcagttggttgggacaatgcataaaatatg 8461857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 159
Target Start/End: Complemental strand, 8148490 - 8148417
Alignment:
Q  86 tcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacctcggtcaccac 159  Q
    ||||||||||| |||| ||||| ||||||||| |||| ||||| ||| ||| | |||| |||||||| ||||||    
T  8148490 tcgtgatcttagctcaattggtatggacaatgtataatatatgcaaggtctaagattcgaacctcggacaccac 8148417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 148
Target Start/End: Complemental strand, 11040480 - 11040420
Alignment:
Q  87 cgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacc 148  Q
    ||||| ||||||||||||| || ||||||||||||||||||| ||| || ||| ||||||||    
T  11040480 cgtgagcttaactcagttgatt-ggacaatgcataaaatatgtaaggtccgaagttcaaacc 11040420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 33373817 - 33373764
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctg 137  Q
    |||||||| ||||||||||||||| |||||||| ||||| ||||| ||| ||||    
T  33373817 cctcgtgaccttaactcagttggtatggacaattcataatatatgtaaggtctg 33373764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 38763580 - 38763527
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctg 137  Q
    |||||||| | || ||||||||||||||||||||||||| ||||| ||| ||||    
T  38763580 cctcgtgagcatagctcagttggtttggacaatgcataatatatgcaaggtctg 38763527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 128
Target Start/End: Original strand, 40399988 - 40400021
Alignment:
Q  95 taactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||||||||| |||||||||||||||||||    
T  40399988 taactcagttggttgggacaatgcataaaatatg 40400021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 135
Target Start/End: Original strand, 43240344 - 43240381
Alignment:
Q  98 ctcagttggtttggacaatgcataaaatatgaaagatc 135  Q
    ||||||||||||||||||||||||| ||||| ||||||    
T  43240344 ctcagttggtttggacaatgcataatatatgcaagatc 43240381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 147
Target Start/End: Original strand, 43778025 - 43778078
Alignment:
Q  94 ttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaac 147  Q
    |||||||||||||| | |||||||||||||||||| ||| |||||  |||||||    
T  43778025 ttaactcagttggtatagacaatgcataaaatatgcaaggtctgaggttcaaac 43778078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 44293571 - 44293624
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctg 137  Q
    |||||||| |||| |||||||||| | |||||||||||| ||||| ||||||||    
T  44293571 cctcgtgagcttagctcagttggtatagacaatgcataatatatgtaagatctg 44293624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 6447185 - 6447229
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    ||||||||  |||||||||||||| |||||||||||||| |||||    
T  6447185 cctcgtgagtttaactcagttggtatggacaatgcataatatatg 6447229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 8137931 - 8137975
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||| | |||| |||||||||| ||||||||||||||||||||    
T  8137931 cctcgtaagcttagctcagttggtatggacaatgcataaaatatg 8137975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 70 - 134
Target Start/End: Original strand, 10601745 - 10601809
Alignment:
Q  70 tgatttagagttgccctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagat 134  Q
    ||||||| ||||  || ||||| ||||| ||||||||| |||||||||||||| ||||| |||||    
T  10601745 tgatttatagttatccgcgtgagcttaattcagttggtatggacaatgcataatatatgcaagat 10601809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 148
Target Start/End: Original strand, 11708982 - 11709046
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacc 148  Q
    |||||||| |||| ||||||||||  ||||||||||||| ||||| ||| || ||| ||||||||    
T  11708982 cctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggtccgaagttcaaacc 11709046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 21557429 - 21557473
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||||||||||| || |||||||||||||| |||||    
T  21557429 cctcgtgagcttaactcagttagtatggacaatgcataatatatg 21557473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 29499767 - 29499811
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||| |||| ||||| ||||||||||||||||||||    
T  29499767 cctcgtgagcttagctcaattggtatggacaatgcataaaatatg 29499811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 32051593 - 32051553
Alignment:
Q  88 gtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||| |||| ||||||||||||||||||||||||| |||||    
T  32051593 gtgagcttagctcagttggtttggacaatgcataatatatg 32051553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 37999485 - 37999441
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| ||||||||||||||| |||| ||||||||| |||||    
T  37999485 cctcgtgagcttaactcagttggtatggataatgcataatatatg 37999441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 8543572 - 8543620
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaag 132  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  8543572 cctcgtgagcttaactcagttggtttggacaatgcataaaatatgaaag 8543620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 11637637 - 11637593
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||    
T  11637637 cctcgtgagcttaactcagttggtatggacaatgcataaaatatg 11637593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 135
Target Start/End: Original strand, 17046331 - 17046381
Alignment:
Q  85 ctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatc 135  Q
    ||||||| ||||||||||||||| |||||||||||||| ||||| ||||||    
T  17046331 ctcgtgagcttaactcagttggtatggacaatgcataatatatgcaagatc 17046381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 127
Target Start/End: Original strand, 29178444 - 29178486
Alignment:
Q  85 ctcgtgatcttaactcagttggtttggacaatgcataaaatat 127  Q
    ||||||| ||||||||||||||| |||||||||||||||||||    
T  29178444 ctcgtgagcttaactcagttggtatggacaatgcataaaatat 29178486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 22555227 - 22555271
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||    
T  22555227 cctcgtgagcttaactcagttggtatggacaatgcatataatatg 22555271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 28207128 - 28207172
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||| |||||||||| ||||||||||||||||||||    
T  28207128 cctcgtgagcttagctcagttggtatggacaatgcataaaatatg 28207172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 34191429 - 34191473
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||| ||||||||||| |||||||||||||||||||    
T  34191429 cctcgtgagcttagctcagttggttgggacaatgcataaaatatg 34191473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 35270746 - 35270702
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||| ||||||||||| |||||||||||||||||||    
T  35270746 cctcgtgagcttagctcagttggttgggacaatgcataaaatatg 35270702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 86 - 137
Target Start/End: Original strand, 3389160 - 3389211
Alignment:
Q  86 tcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctg 137  Q
    |||||| | ||||||||||||| |||||||||||||| ||||| ||||||||    
T  3389160 tcgtgaacataactcagttggtatggacaatgcataatatatgcaagatctg 3389211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 86 - 137
Target Start/End: Complemental strand, 11310514 - 11310463
Alignment:
Q  86 tcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctg 137  Q
    |||||| |||| |||||||||||||||||||| |||| ||||| ||||||||    
T  11310514 tcgtgagcttagctcagttggtttggacaatgtataatatatgcaagatctg 11310463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 85 - 132
Target Start/End: Complemental strand, 26034672 - 26034625
Alignment:
Q  85 ctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaag 132  Q
    ||||||| ||||||||||||||| || ||||||||||| |||||||||    
T  26034672 ctcgtgagcttaactcagttggtatgaacaatgcataatatatgaaag 26034625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 93 - 152
Target Start/End: Complemental strand, 33014300 - 33014241
Alignment:
Q  93 cttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacctcgg 152  Q
    |||| |||||||||| |||||||||||||| ||||||||| ||||   ||||||||||||    
T  33014300 cttagctcagttggtgtggacaatgcataatatatgaaaggtctggggttcaaacctcgg 33014241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 134
Target Start/End: Original strand, 3156530 - 3156580
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagat 134  Q
    ||||||||  |||||||||||||| |||| ||||||||||||||| |||||    
T  3156530 cctcgtgagtttaactcagttggtatggataatgcataaaatatgtaagat 3156580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 128
Target Start/End: Complemental strand, 10032337 - 10032295
Alignment:
Q  86 tcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||| ||||||||||||||| |||||||||||||| |||||    
T  10032337 tcgtgagcttaactcagttggtatggacaatgcataacatatg 10032295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 127
Target Start/End: Original strand, 18995633 - 18995683
Alignment:
Q  77 gagttgccctcgtgatcttaactcagttggtttggacaatgcataaaatat 127  Q
    |||||| |||||||| |||||||||||| || |||||||||||||| ||||    
T  18995633 gagttgtcctcgtgaacttaactcagtttgtatggacaatgcataatatat 18995683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 128
Target Start/End: Original strand, 20688038 - 20688080
Alignment:
Q  86 tcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||| |||| ||||||||||||||||||||||||| |||||    
T  20688038 tcgtgaacttagctcagttggtttggacaatgcataatatatg 20688080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 31561409 - 31561371
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataa 122  Q
    |||||||| ||||||||||||||| ||||||||||||||    
T  31561409 cctcgtgagcttaactcagttggtatggacaatgcataa 31561371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 135
Target Start/End: Original strand, 31877925 - 31877975
Alignment:
Q  85 ctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatc 135  Q
    ||||||| ||||||||| ||||| |||||||||||||| ||||| ||||||    
T  31877925 ctcgtgagcttaactcacttggtatggacaatgcataatatatgcaagatc 31877975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 128
Target Start/End: Complemental strand, 41651002 - 41650960
Alignment:
Q  86 tcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||| ||||||||||||||| |||||||||||||| |||||    
T  41651002 tcgtgagcttaactcagttggtatggacaatgcataatatatg 41650960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 1808663 - 1808614
Alignment:
Q  79 gttgccctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||| |||||||| |||| |||||||||| |||| |||||||||||||||    
T  1808663 gttgtcctcgtgaacttagctcagttggtatggataatgcataaaatatg 1808614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 24408491 - 24408544
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctg 137  Q
    |||||||| |||| |||||||||||||||| |||||||| ||||| ||| ||||    
T  24408491 cctcgtgagcttagctcagttggtttggacgatgcataatatatgcaaggtctg 24408544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 34702489 - 34702534
Alignment:
Q  87 cgtgatcttaactcagttggtttggacaatgcataaaatatgaaag 132  Q
    ||||| |||||||||||||||  ||||||||||||| |||||||||    
T  34702489 cgtgagcttaactcagttggtaaggacaatgcataatatatgaaag 34702534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 148
Target Start/End: Original strand, 689543 - 689607
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacc 148  Q
    |||||||| ||||||||||||| | ||||||||| |||| ||||| ||||| |||  ||||||||    
T  689543 cctcgtgaacttaactcagttgatatggacaatgtataatatatgtaagatttgatgttcaaacc 689607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 10199010 - 10199058
Alignment:
Q  79 gttgccctcgtgatcttaactcagttggtttggacaatgcataaaatat 127  Q
    |||| |||||||| |||| |||||||||| |||||||||||||| ||||    
T  10199010 gttgtcctcgtgagcttagctcagttggtatggacaatgcataatatat 10199058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 10704392 - 10704352
Alignment:
Q  88 gtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||| |||| |||||||||| ||||||||||||||||||||    
T  10704392 gtgagcttagctcagttggtatggacaatgcataaaatatg 10704352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 17708070 - 17708114
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| | ||||||||||| | ||||||||||||||||||||    
T  17708070 cctcgtgagcataactcagttgatatggacaatgcataaaatatg 17708114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 18589932 - 18589888
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| ||||||||||||||| || ||||||||||| |||||    
T  18589932 cctcgtgagcttaactcagttggtatgaacaatgcataatatatg 18589888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 29695011 - 29695055
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| ||||||||||||| | |||||||||||||| |||||    
T  29695011 cctcgtgaccttaactcagttgatatggacaatgcataatatatg 29695055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 31198705 - 31198749
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    ||||||||||||||||||||||||  ||| ||||||||| |||||    
T  31198705 cctcgtgatcttaactcagttggtaaggataatgcataatatatg 31198749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 32858666 - 32858710
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||| ||| |||||| ||||||||||||||||||||    
T  32858666 cctcgtgagcttagctccgttggtatggacaatgcataaaatatg 32858710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 33645754 - 33645710
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| ||||||||||||||| ||||||||| |||| |||||    
T  33645754 cctcgtgagcttaactcagttggtatggacaatgtataatatatg 33645710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 37932326 - 37932370
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||| |||||||||| |||||||||||||| |||||    
T  37932326 cctcgtgagcttagctcagttggtatggacaatgcataatatatg 37932370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 38495142 - 38495182
Alignment:
Q  88 gtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||| ||||||||||||||| |||| |||||||||||||||    
T  38495142 gtgaacttaactcagttggtatggataatgcataaaatatg 38495182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 39980504 - 39980548
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||| |||||||||| |||| |||||||||||||||    
T  39980504 cctcgtgagcttagctcagttggtatggataatgcataaaatatg 39980548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 40837968 - 40837924
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| ||||||||||||||| ||||||||  ||||||||||    
T  40837968 cctcgtgaacttaactcagttggtatggacaatatataaaatatg 40837924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 10109714 - 10109660
Alignment:
Q  81 tgccctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatc 135  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||    
T  10109714 tgccctcgtgagcttagctcagttggtttggacaatgcataaaatatgtaagatc 10109660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 84 - 134
Target Start/End: Original strand, 18789411 - 18789461
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagat 134  Q
    |||||||| |||||||||||||||||||||||||||||| ||||| |||||    
T  18789411 cctcgtgagcttaactcagttggtttggacaatgcataatatatgcaagat 18789461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 84 - 159
Target Start/End: Original strand, 10723935 - 10724010
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacctcggtcaccac 159  Q
    |||||||| |||||||||||||||||||  ||||||||| ||||| ||| |||||  |||||||| ||| ||||||    
T  10723935 cctcgtgagcttaactcagttggtttgggtaatgcataatatatgcaaggtctgaggttcaaaccccggccaccac 10724010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 84 - 127
Target Start/End: Original strand, 22558973 - 22559016
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatat 127  Q
    ||||||||  ||||||||||||||||||||||||||||||||||    
T  22558973 cctcgtgagtttaactcagttggtttggacaatgcataaaatat 22559016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 84 - 127
Target Start/End: Complemental strand, 29798582 - 29798539
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatat 127  Q
    |||||||| ||||||||||||||| |||||||||||||||||||    
T  29798582 cctcgtgagcttaactcagttggtatggacaatgcataaaatat 29798539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 138
Target Start/End: Complemental strand, 36194009 - 36193955
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctga 138  Q
    ||||||||| ||| ||||||||||||| ||||||||||||||||| ||| |||||    
T  36194009 cctcgtgatgttacctcagttggtttgaacaatgcataaaatatgcaaggtctga 36193955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 2256967 - 2257020
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctg 137  Q
    |||||||| ||||||||||||||| |||||||||||||| ||||| ||| ||||    
T  2256967 cctcgtgagcttaactcagttggtatggacaatgcataatatatgcaaggtctg 2257020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 34977200 - 34977244
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| ||||||||||||||| |||||||||||||| |||||    
T  34977200 cctcgtgagcttaactcagttggtatggacaatgcataatatatg 34977244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 158
Target Start/End: Original strand, 41859858 - 41859922
Alignment:
Q  94 ttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacctcggtcacca 158  Q
    |||||||||||||| |||||||||||||||||||| ||| ||||   |||||||| ||| |||||    
T  41859858 ttaactcagttggtatggacaatgcataaaatatgcaaggtctggggttcaaaccccggccacca 41859922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 17736789 - 17736840
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatc 135  Q
    |||||||| |||| |||||||||| || ||||||||||||||||| ||||||    
T  17736789 cctcgtgagcttagctcagttggtatgaacaatgcataaaatatgtaagatc 17736840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 85 - 128
Target Start/End: Complemental strand, 37133044 - 37133001
Alignment:
Q  85 ctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||    
T  37133044 ctcgtgagcttagctcagttggttgggacaatgcataaaatatg 37133001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 159
Target Start/End: Original strand, 45032689 - 45032764
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacctcggtcaccac 159  Q
    |||||||| |||| ||||||||||  ||||||||||||| ||||| |||||||||   ||||||||| | ||||||    
T  45032689 cctcgtgagcttacctcagttggtagggacaatgcataatatatgcaagatctgaggctcaaacctcagccaccac 45032764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 14414960 - 14414922
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataa 122  Q
    |||||||| ||||||||||||||| ||||||||||||||    
T  14414960 cctcgtgagcttaactcagttggtatggacaatgcataa 14414922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 126
Target Start/End: Complemental strand, 27017575 - 27017533
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaata 126  Q
    |||||||| ||||||||| |||||| |||||||||||||||||    
T  27017575 cctcgtgagcttaactcaattggttaggacaatgcataaaata 27017533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 148
Target Start/End: Complemental strand, 30929100 - 30929046
Alignment:
Q  94 ttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacc 148  Q
    |||||||||||| | |||||||||||||| ||||  ||||||| |||||||||||    
T  30929100 ttaactcagttgatatggacaatgcataatatatataagatctaaaattcaaacc 30929046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 138
Target Start/End: Complemental strand, 42475175 - 42475121
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctga 138  Q
    |||||||| ||||||||||||||| |  ||||||||||||||||| ||| |||||    
T  42475175 cctcgtgagcttaactcagttggtataaacaatgcataaaatatgcaaggtctga 42475121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 17413407 - 17413346
Alignment:
Q  74 ttagagttgccctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatc 135  Q
    |||||| || ||||||||  ||||||||||||||| | | ||||||||||||||| ||||||    
T  17413407 ttagaggtgtcctcgtgagtttaactcagttggttggaataatgcataaaatatgtaagatc 17413346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 4227036 - 4226992
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| ||||||||| |||||| | |||||||||||||||||    
T  4227036 cctcgtgagcttaactcaattggttggaacaatgcataaaatatg 4226992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 7201503 - 7201547
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||| ||||||||||||| ||||||||||| |||||    
T  7201503 cctcgtgagcttagctcagttggtttgaacaatgcataatatatg 7201547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 8761629 - 8761585
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| ||||||||||||||| |||||||| ||||| |||||    
T  8761629 cctcgtgagcttaactcagttggtatggacaatacataatatatg 8761585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 9383274 - 9383230
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||| |||||||||| |||||||||||||| |||||    
T  9383274 cctcgtgagcttagctcagttggtatggacaatgcataatatatg 9383230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 9842267 - 9842223
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||| ||||||||||  |||||||||||||||||||    
T  9842267 cctcgtgagcttagctcagttggtagggacaatgcataaaatatg 9842223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 11428915 - 11428871
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| ||||||||| ||||  ||||||||||||||||||||    
T  11428915 cctcgtgagcttaactcaattggaatggacaatgcataaaatatg 11428871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 13196696 - 13196740
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| ||||||||||||||| || ||||||||||| |||||    
T  13196696 cctcgtgaacttaactcagttggtatgaacaatgcataatatatg 13196740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 13787595 - 13787547
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaag 132  Q
    |||||||| | |||||||||| || |||||||||||||| |||||||||    
T  13787595 cctcgtgagcataactcagttagtatggacaatgcataatatatgaaag 13787547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 136
Target Start/End: Complemental strand, 18324955 - 18324907
Alignment:
Q  88 gtgatcttaactcagttggtttggacaatgcataaaatatgaaagatct 136  Q
    |||| |||||||||||||||  ||||||||||||| ||||| |||||||    
T  18324955 gtgagcttaactcagttggtaaggacaatgcataatatatgcaagatct 18324907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 78 - 138
Target Start/End: Original strand, 30019913 - 30019973
Alignment:
Q  78 agttgccctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctga 138  Q
    ||||| |||||||| |||| ||||  ||||| ||||||||||||||||||| ||| |||||    
T  30019913 agttgtcctcgtgagcttagctcaactggttgggacaatgcataaaatatgcaaggtctga 30019973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 30040782 - 30040722
Alignment:
Q  78 agttgccctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctga 138  Q
    ||||| |||||||| |||| ||||  ||||| ||||||||||||||||||| ||| |||||    
T  30040782 agttgtcctcgtgagcttagctcaactggttgggacaatgcataaaatatgcaaggtctga 30040722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 30110260 - 30110200
Alignment:
Q  78 agttgccctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctga 138  Q
    ||||| |||||||| |||| ||||  ||||| ||||||||||||||||||| ||| |||||    
T  30110260 agttgtcctcgtgagcttagctcaactggttgggacaatgcataaaatatgcaaggtctga 30110200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 30234920 - 30234860
Alignment:
Q  78 agttgccctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctga 138  Q
    ||||| |||||||| |||| ||||  ||||| ||||||||||||||||||| ||| |||||    
T  30234920 agttgtcctcgtgagcttagctcaactggttgggacaatgcataaaatatgcaaggtctga 30234860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 86 - 122
Target Start/End: Complemental strand, 34686027 - 34685991
Alignment:
Q  86 tcgtgatcttaactcagttggtttggacaatgcataa 122  Q
    |||||| |||| |||||||||||||||||||||||||    
T  34686027 tcgtgagcttagctcagttggtttggacaatgcataa 34685991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 86 - 122
Target Start/End: Complemental strand, 34708448 - 34708412
Alignment:
Q  86 tcgtgatcttaactcagttggtttggacaatgcataa 122  Q
    |||||| |||| |||||||||||||||||||||||||    
T  34708448 tcgtgagcttagctcagttggtttggacaatgcataa 34708412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 120
Target Start/End: Complemental strand, 39340314 - 39340278
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcat 120  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  39340314 cctcgtgatcttacctcagttggtatggacaatgcat 39340278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 40365471 - 40365427
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||| |||||||||| || |||||||||||||||||    
T  40365471 cctcgtgagcttagctcagttggtatgtacaatgcataaaatatg 40365427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 41187522 - 41187478
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||| || ||||||| ||||||||||||||||||||    
T  41187522 cctcgtgagcttagcttagttggtatggacaatgcataaaatatg 41187478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 96 - 148
Target Start/End: Complemental strand, 41748809 - 41748757
Alignment:
Q  96 aactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacc 148  Q
    ||||||| |||| |||||||||||||||||||| |||||| |  |||||||||    
T  41748809 aactcagctggtatggacaatgcataaaatatgtaagatccgggattcaaacc 41748757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 44597840 - 44597884
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| ||||||||| ||||||| |||||||||||| |||||    
T  44597840 cctcgtgagcttaactcaattggtttagacaatgcataatatatg 44597884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 45314786 - 45314830
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| ||||||||||| |||| ||| |||||||||||||||    
T  45314786 cctcgtgagcttaactcagtaggttgggataatgcataaaatatg 45314830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 93 - 159
Target Start/End: Original strand, 30382501 - 30382567
Alignment:
Q  93 cttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacctcggtcaccac 159  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||   |||||||||||| ||||||    
T  30382501 cttaactcagttggtttggacaatgcataaaatatgcaaggtctggcgttcaaacctcggccaccac 30382567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 13590106 - 13590150
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||| |||||||||||||||||||||||||||||||    
T  13590106 cctcgtgagcttagctcagttggtttggacaatgcataaaatatg 13590150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 15668494 - 15668538
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    ||||||||||||||||||||||||| | |||||||||||||||||    
T  15668494 cctcgtgatcttaactcagttggttggaacaatgcataaaatatg 15668538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 84 - 147
Target Start/End: Original strand, 23334584 - 23334647
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaac 147  Q
    |||||||| |||||||||| || |||||||||||||||||||||| ||| | |||| |||||||    
T  23334584 cctcgtgagcttaactcagctgatttggacaatgcataaaatatgcaaggtttgaagttcaaac 23334647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 42045437 - 42045362
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacctcggtcaccac 159  Q
    |||||||| |||| |||||||||| |||||||||||||| ||||| ||| |||| | |||||||| ||| ||||||    
T  42045437 cctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtctggagttcaaaccccggccaccac 42045362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 84 - 127
Target Start/End: Complemental strand, 44860948 - 44860905
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatat 127  Q
    |||||||| |||| ||||||||||||||||||||||||||||||    
T  44860948 cctcgtgaacttagctcagttggtttggacaatgcataaaatat 44860905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 8266251 - 8266213
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataa 122  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  8266251 cctcgtgatcttaactcagttggtatggacaatgcataa 8266213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 11701956 - 11702006
Alignment:
Q  78 agttgccctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    ||||| |||||||| ||||| |||||||||| |||||||||||||||||||    
T  11701956 agttgtcctcgtgagcttaattcagttggttgggacaatgcataaaatatg 11702006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 134
Target Start/End: Original strand, 47340787 - 47340833
Alignment:
Q  88 gtgatcttaactcagttggtttggacaatgcataaaatatgaaagat 134  Q
    |||| |||| ||||||||||| |||||||||||||||||||||||||    
T  47340787 gtgagcttagctcagttggttgggacaatgcataaaatatgaaagat 47340833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 146
Target Start/End: Original strand, 52267760 - 52267822
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaa 146  Q
    |||||||| |||||||||||||||  ||||||||||||||||||| ||| ||||  |||||||    
T  52267760 cctcgtgagcttaactcagttggtaaggacaatgcataaaatatgcaaggtctgggattcaaa 52267822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 30895331 - 30895376
Alignment:
Q  85 ctcgtgatcttaactcagttggtttggacaatgcataaaatatgaa 130  Q
    ||||||| ||||||||||||||| |||||||| |||||||||||||    
T  30895331 ctcgtgagcttaactcagttggtatggacaatacataaaatatgaa 30895376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 2613718 - 2613762
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||| |||||||||| ||||||||||||||||||||    
T  2613718 cctcgtgagcttagctcagttggtatggacaatgcataaaatatg 2613762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 50040352 - 50040396
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||| ||||||||||| |||||||||||||||||||    
T  50040352 cctcgtgaacttagctcagttggttgggacaatgcataaaatatg 50040396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 147
Target Start/End: Original strand, 13673541 - 13673604
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaac 147  Q
    |||||||| |||| ||| ||||||||| ||||||||||||||||| ||||| || | |||||||    
T  13673541 cctcgtgagcttagctcggttggtttgaacaatgcataaaatatgcaagatttggagttcaaac 13673604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 127
Target Start/End: Complemental strand, 32007662 - 32007619
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatat 127  Q
    |||||||| |||||||||||| ||| ||||||||||||||||||    
T  32007662 cctcgtgagcttaactcagttcgttgggacaatgcataaaatat 32007619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 88 - 127
Target Start/End: Original strand, 33153620 - 33153659
Alignment:
Q  88 gtgatcttaactcagttggtttggacaatgcataaaatat 127  Q
    |||| |||||||||||||||| ||||||||||||||||||    
T  33153620 gtgagcttaactcagttggttgggacaatgcataaaatat 33153659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 43840390 - 43840339
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatc 135  Q
    ||||||||  |||||||||||| | |||||||||||||||||||| ||||||    
T  43840390 cctcgtgagtttaactcagttgatatggacaatgcataaaatatgtaagatc 43840339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 159
Target Start/End: Original strand, 47417779 - 47417854
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacctcggtcaccac 159  Q
    |||| ||| ||||||||| |||||| ||||||||||||| ||||| ||| |  | | |||||||||||||||||||    
T  47417779 cctcatgaacttaactcaattggttaggacaatgcataatatatgcaaggttcggagttcaaacctcggtcaccac 47417854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 128
Target Start/End: Complemental strand, 10356246 - 10356204
Alignment:
Q  86 tcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||| ||||||||||||||| |||||||||||||| |||||    
T  10356246 tcgtgagcttaactcagttggtatggacaatgcataatatatg 10356204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 131
Target Start/End: Original strand, 21041341 - 21041387
Alignment:
Q  85 ctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaa 131  Q
    |||||||  ||| |||||||||| |||||||||||||||||||||||    
T  21041341 ctcgtgagtttacctcagttggtatggacaatgcataaaatatgaaa 21041387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 134
Target Start/End: Original strand, 23524824 - 23524870
Alignment:
Q  88 gtgatcttaactcagttggtttggacaatgcataaaatatgaaagat 134  Q
    |||| ||||||||||||| || | |||||||||||||||||||||||    
T  23524824 gtgagcttaactcagttgattggaacaatgcataaaatatgaaagat 23524870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 49875666 - 49875620
Alignment:
Q  82 gccctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||||| |||||||||||||||  ||||||||||||| |||||    
T  49875666 gccctcgtgagcttaactcagttggtaaggacaatgcataatatatg 49875620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 2636819 - 2636782
Alignment:
Q  85 ctcgtgatcttaactcagttggtttggacaatgcataa 122  Q
    ||||||| ||||||||||||||| ||||||||||||||    
T  2636819 ctcgtgagcttaactcagttggtatggacaatgcataa 2636782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 159
Target Start/End: Complemental strand, 6000198 - 6000133
Alignment:
Q  94 ttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacctcggtcaccac 159  Q
    ||||||||||||||| ||||||||||||| ||||| ||| || ||  |||||||| ||| ||||||    
T  6000198 ttaactcagttggttaggacaatgcataatatatgcaaggtccgaggttcaaaccccggacaccac 6000133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 14520943 - 14520984
Alignment:
Q  87 cgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    ||||| |||| |||||||||| ||||||||||||||||||||    
T  14520943 cgtgagcttagctcagttggtatggacaatgcataaaatatg 14520984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 29451046 - 29451009
Alignment:
Q  85 ctcgtgatcttaactcagttggtttggacaatgcataa 122  Q
    ||||||| ||||||||||||||| ||||||||||||||    
T  29451046 ctcgtgagcttaactcagttggtatggacaatgcataa 29451009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 42888574 - 42888615
Alignment:
Q  87 cgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    ||||| |||| |||||||||| ||||||||||||||||||||    
T  42888574 cgtgagcttagctcagttggtatggacaatgcataaaatatg 42888615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 121
Target Start/End: Complemental strand, 47692970 - 47692933
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcata 121  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  47692970 cctcgtgagcttaactcagttggtatggacaatgcata 47692933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 12872194 - 12872150
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    ||||||||| ||| ||||||||||| ||||||| |||||||||||    
T  12872194 cctcgtgatattagctcagttggttgggacaatacataaaatatg 12872150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 16826350 - 16826394
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||| |||||||| | ||||||||||||||||||||    
T  16826350 cctcgtgagcttagctcagttgctatggacaatgcataaaatatg 16826394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 20371842 - 20371882
Alignment:
Q  88 gtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||| |||||||| ||||||||| |||||||||||||||||    
T  20371842 gtgagcttaactccgttggtttgaacaatgcataaaatatg 20371882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 20481096 - 20481140
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||| ||||||||||||| |||||||||||| ||||    
T  20481096 cctcgtgagcttagctcagttggtttgaacaatgcataaattatg 20481140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 25086483 - 25086523
Alignment:
Q  88 gtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||| |||| |||||||||| ||||||||||||||||||||    
T  25086483 gtgagcttagctcagttggtatggacaatgcataaaatatg 25086523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 26803516 - 26803472
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||| |||||||||| |||||||||||||| |||||    
T  26803516 cctcgtgaacttagctcagttggtatggacaatgcataatatatg 26803472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 30678878 - 30678834
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||||||||||||||  ||||||||||||| |||||    
T  30678878 cctcgtgagcttaactcagttggtagggacaatgcataatatatg 30678834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 32923829 - 32923877
Alignment:
Q  99 tcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaac 147  Q
    |||||||||  ||||||||||||| ||||||||| |||||| |||||||    
T  32923829 tcagttggtagggacaatgcataatatatgaaaggtctgaagttcaaac 32923877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 159
Target Start/End: Original strand, 39452456 - 39452532
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcat-aaaatatgaaagatctgaaattcaaacctcggtcaccac 159  Q
    |||||||| |||| |||||||||| || ||||||||| |||||||| ||| ||||  ||||||||| ||| ||||||    
T  39452456 cctcgtgagcttagctcagttggtatgaacaatgcataaaaatatgcaaggtctgggattcaaaccccggccaccac 39452532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 48100722 - 48100762
Alignment:
Q  88 gtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||| |||| |||||||||| ||||||||||||||||||||    
T  48100722 gtgagcttagctcagttggtatggacaatgcataaaatatg 48100762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 49843430 - 49843474
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| ||||||||| |||||||| ||||||||||| |||||    
T  49843430 cctcgtgagcttaactcaattggtttgaacaatgcataatatatg 49843474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 10025990 - 10026034
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  10025990 cctcgtgagcttaactcagttggtttggacaatgcataaaatatg 10026034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 48103744 - 48103695
Alignment:
Q  79 gttgccctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||| |||||||| |||||||||||||||| |||||||||||||||||||    
T  48103744 gttgtcctcgtgagcttaactcagttggttgggacaatgcataaaatatg 48103695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 19626590 - 19626546
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||||||||||||||||||||||||||||| |||||    
T  19626590 cctcgtgagcttaactcagttggtttggacaatgcataatatatg 19626546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 21993178 - 21993222
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||    
T  21993178 cctcgtgagcttaactcagttggtatggacaatgcataaaatatg 21993222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 34448675 - 34448631
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||||||||||||||||||||||||||||| |||||    
T  34448675 cctcgtgagcttaactcagttggtttggacaatgcataatatatg 34448631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 40808224 - 40808180
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||||||||||||||||||||| |||||||||||||    
T  40808224 cctcgtgagcttaactcagttggtttggacagtgcataaaatatg 40808180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 93 - 132
Target Start/End: Complemental strand, 44770199 - 44770160
Alignment:
Q  93 cttaactcagttggtttggacaatgcataaaatatgaaag 132  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  44770199 cttaactcagttggtatggacaatgcataaaatatgaaag 44770160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 19416504 - 19416554
Alignment:
Q  78 agttgccctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    ||||| |||||||| |||| |||||||||| ||||||||||||||||||||    
T  19416504 agttgtcctcgtgagcttagctcagttggtatggacaatgcataaaatatg 19416554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 159
Target Start/End: Complemental strand, 19578205 - 19578127
Alignment:
Q  81 tgccctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacctcggtcaccac 159  Q
    ||||| |||||  |||||||||||| ||| |||||||||||||||||| ||| ||||   |||||||||| ||||||||    
T  19578205 tgcccccgtgagtttaactcagttgattttgacaatgcataaaatatgcaaggtctggggttcaaacctcagtcaccac 19578127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 24839484 - 24839537
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctg 137  Q
    |||||||| ||||||||||||||| | |||||||||||||||||| ||| ||||    
T  24839484 cctcgtgagcttaactcagttggtatagacaatgcataaaatatgtaaggtctg 24839537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 35103492 - 35103545
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctg 137  Q
    |||||||| |||| ||||||||||| ||||||||||||||||||| ||| ||||    
T  35103492 cctcgtgagcttagctcagttggttgggacaatgcataaaatatgcaaggtctg 35103545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 124
Target Start/End: Complemental strand, 4227593 - 4227553
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaa 124  Q
    |||||||| ||||||||||||||| ||||||||||||||||    
T  4227593 cctcgtgagcttaactcagttggtatggacaatgcataaaa 4227553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 4905272 - 4905316
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| ||||||||||||| | ||||||||||||||||||||    
T  4905272 cctcgtgagcttaactcagttgttgtggacaatgcataaaatatg 4905316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 6023305 - 6023349
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||| ||||||||||||||||||||| |||||||||    
T  6023305 cctcgtgagcttagctcagttggtttggacaatgcttaaaatatg 6023349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 7388104 - 7388060
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||||||||||||||| ||||||||||||| |||||    
T  7388104 cctcgtgagcttaactcagttggttgggacaatgcataatatatg 7388060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 140
Target Start/End: Original strand, 8683066 - 8683122
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaa 140  Q
    |||||||| |||| |||||||||| | |||||||||||| ||||| |||||||||||    
T  8683066 cctcgtgagcttagctcagttggtatagacaatgcataatatatgcaagatctgaaa 8683122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 18378398 - 18378442
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||| ||||||||||| |||||||||||||||||||    
T  18378398 cctcgtgagcttagctcagttggttgggacaatgcataaaatatg 18378442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 27993094 - 27993050
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| ||||||||||||||| || |||||||||||||||||    
T  27993094 cctcgtgagcttaactcagttggtatgaacaatgcataaaatatg 27993050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 44454508 - 44454552
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||||||||||||||  |||||||||||||||||||    
T  44454508 cctcgtgagcttaactcagttggtagggacaatgcataaaatatg 44454552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 47342499 - 47342455
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||| ||| |||||||||||||||||||||||||||||| |||||    
T  47342499 cctcatgagcttaactcagttggtttggacaatgcataatatatg 47342455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 47342673 - 47342717
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||| |||||||||| ||||||||||||||||||||    
T  47342673 cctcgtgaacttagctcagttggtatggacaatgcataaaatatg 47342717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 580991 - 580940
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatc 135  Q
    |||||||| |||| ||| |||||| |||||||||||||||||||| ||||||    
T  580991 cctcgtgagcttagctcggttggtatggacaatgcataaaatatgcaagatc 580940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 88 - 159
Target Start/End: Original strand, 2450580 - 2450651
Alignment:
Q  88 gtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacctcggtcaccac 159  Q
    |||| ||||||||||||||| || ||||| ||||||||||| ||  ||||| ||||||| | ||||||||||    
T  2450580 gtgagcttaactcagttggtatgaacaatacataaaatatgtaatgtctgagattcaaatcccggtcaccac 2450651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 39801702 - 39801753
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatc 135  Q
    |||||||| |||| |||||||||| |||||||||||||| ||||| ||||||    
T  39801702 cctcgtgagcttagctcagttggtatggacaatgcataatatatgcaagatc 39801753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 138
Target Start/End: Complemental strand, 768171 - 768117
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctga 138  Q
    |||||||| |||| || |||||||| ||||||||||||| ||||| |||||||||    
T  768171 cctcgtgagcttagctgagttggttgggacaatgcataatatatgcaagatctga 768117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 8883549 - 8883587
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataa 122  Q
    |||||||| ||||||||||||||| ||||||||||||||    
T  8883549 cctcgtgagcttaactcagttggtatggacaatgcataa 8883587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 135
Target Start/End: Complemental strand, 18505721 - 18505671
Alignment:
Q  85 ctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatc 135  Q
    ||||||| |||| ||||||||||  ||||||||||||||||||| ||||||    
T  18505721 ctcgtgagcttagctcagttggtagggacaatgcataaaatatgcaagatc 18505671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 128
Target Start/End: Original strand, 36428146 - 36428188
Alignment:
Q  86 tcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||| ||||||||||||||| ||||||||| ||||||||||    
T  36428146 tcgtgagcttaactcagttggtatggacaatgtataaaatatg 36428188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 5041335 - 5041388
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctg 137  Q
    |||||||| ||||||| ||||||| |||||||||||||| ||||| ||| ||||    
T  5041335 cctcgtgagcttaactgagttggtatggacaatgcataatatatgcaaggtctg 5041388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 138
Target Start/End: Original strand, 7791897 - 7791950
Alignment:
Q  85 ctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctga 138  Q
    ||||||| |||| ||||||||||||||||||||| ||| ||||| ||| |||||    
T  7791897 ctcgtgagcttagctcagttggtttggacaatgcgtaatatatgcaaggtctga 7791950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 27263340 - 27263381
Alignment:
Q  87 cgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    ||||| ||||||||||||||| |||||||||||||| |||||    
T  27263340 cgtgaacttaactcagttggtatggacaatgcataatatatg 27263381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 27270234 - 27270275
Alignment:
Q  87 cgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    ||||| ||||||||||||||| |||||||||||||| |||||    
T  27270234 cgtgaacttaactcagttggtatggacaatgcataatatatg 27270275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 123
Target Start/End: Complemental strand, 46221013 - 46220976
Alignment:
Q  86 tcgtgatcttaactcagttggtttggacaatgcataaa 123  Q
    |||||| ||||||||||||||| |||||||||||||||    
T  46221013 tcgtgagcttaactcagttggtatggacaatgcataaa 46220976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 1079757 - 1079713
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||||||||||| ||| | |||||||||||||||||    
T  1079757 cctcgtgagcttaactcagttagttggaacaatgcataaaatatg 1079713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 148
Target Start/End: Original strand, 1399158 - 1399222
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacc 148  Q
    ||||||||  |||||||||||||| |||||||||||| | ||||| ||| ||||| |||| ||||    
T  1399158 cctcgtgagtttaactcagttggtatggacaatgcatgatatatgcaaggtctgagattcgaacc 1399222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 10244723 - 10244767
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||| |||||||||| |||||||||||||| |||||    
T  10244723 cctcgtgagcttagctcagttggtatggacaatgcataatatatg 10244767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 93 - 149
Target Start/End: Complemental strand, 21928174 - 21928118
Alignment:
Q  93 cttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacct 149  Q
    ||||||| ||||||| ||||||||||||||  |||| ||| ||||| ||||||||||    
T  21928174 cttaacttagttggtatggacaatgcataatttatgcaaggtctgagattcaaacct 21928118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 22991452 - 22991412
Alignment:
Q  88 gtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||| ||||||||||||||| |||||||||||||| |||||    
T  22991452 gtgagcttaactcagttggtatggacaatgcataatatatg 22991412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 23198814 - 23198770
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    ||||||||  |||||||||||||| || |||||||||||||||||    
T  23198814 cctcgtgagtttaactcagttggtatgaacaatgcataaaatatg 23198770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 23413103 - 23413067
Alignment:
Q  92 tcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||||||||||| |||||||||||||| |||||    
T  23413103 tcttaactcagttggtatggacaatgcataatatatg 23413067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 24226046 - 24226002
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||| ||||||| || ||||||||||||||||||||    
T  24226046 cctcgtgaacttagctcagttcgtatggacaatgcataaaatatg 24226002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 35224114 - 35224158
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| ||||  |||||||||| |||||||||||||||||||    
T  35224114 cctcgtgaacttagttcagttggttgggacaatgcataaaatatg 35224158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 124
Target Start/End: Original strand, 38728204 - 38728244
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaa 124  Q
    |||||||| |||| |||||||||| ||||||||||||||||    
T  38728204 cctcgtgagcttagctcagttggtatggacaatgcataaaa 38728244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 44406917 - 44406877
Alignment:
Q  88 gtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||| |||| ||||||||||| |||||||||||||||||||    
T  44406917 gtgagcttagctcagttggttgggacaatgcataaaatatg 44406877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 46207756 - 46207800
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||| |||||||||| || |||||||||||||||||    
T  46207756 cctcgtgagcttagctcagttggtatgaacaatgcataaaatatg 46207800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 46551991 - 46552039
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaag 132  Q
    |||||||| ||||||||||||||| | |||||||||| | |||||||||    
T  46551991 cctcgtgagcttaactcagttggtatagacaatgcatgatatatgaaag 46552039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 46737781 - 46737825
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||| ||||||| ||||||||||||||||| |||||    
T  46737781 cctcgtgagcttagctcagtttgtttggacaatgcataatatatg 46737825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 47589618 - 47589574
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||| |||||||||| || |||||||||||||||||    
T  47589618 cctcgtgagcttagctcagttggtatgaacaatgcataaaatatg 47589574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 84 - 147
Target Start/End: Original strand, 9677231 - 9677294
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaac 147  Q
    |||||||| |||| ||||||||||||||||||||||||| |||||||| |||||  ||||||||    
T  9677231 cctcgtgagcttagctcagttggtttggacaatgcataatatatgaaaaatctgggattcaaac 9677294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 3358387 - 3358431
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||||||||||||||||||||||||||||| |||||    
T  3358387 cctcgtgaacttaactcagttggtttggacaatgcataatatatg 3358431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 12735308 - 12735264
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||||||||||||||| |||||||||||||||||||    
T  12735308 cctcgtgagcttaactcagttggttgggacaatgcataaaatatg 12735264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 85 - 128
Target Start/End: Original strand, 2108722 - 2108765
Alignment:
Q  85 ctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||    
T  2108722 ctcgtgagcttaactcagttggtatggacaatgcataaaatatg 2108765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 88 - 135
Target Start/End: Complemental strand, 24167951 - 24167904
Alignment:
Q  88 gtgatcttaactcagttggtttggacaatgcataaaatatgaaagatc 135  Q
    |||| |||||||||||||||||| ||||||||||||||||| ||||||    
T  24167951 gtgagcttaactcagttggtttgtacaatgcataaaatatgcaagatc 24167904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 128
Target Start/End: Original strand, 17935727 - 17935769
Alignment:
Q  86 tcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||| |||| |||||||||||||||||||||||||||||||    
T  17935727 tcgtgaacttagctcagttggtttggacaatgcataaaatatg 17935769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 86 - 135
Target Start/End: Complemental strand, 2655090 - 2655041
Alignment:
Q  86 tcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatc 135  Q
    |||||| |||||||||||| ||| ||||||||||||||||||| ||||||    
T  2655090 tcgtgagcttaactcagtttgttgggacaatgcataaaatatgtaagatc 2655041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 84 - 157
Target Start/End: Original strand, 28898852 - 28898925
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacctcggtcacc 157  Q
    |||||||||||||||| |||||||  ||||||||||||| ||||||||| || | | |||||||| ||| ||||    
T  28898852 cctcgtgatcttaacttagttggtaaggacaatgcataatatatgaaaggtccggagttcaaaccccggccacc 28898925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 4494936 - 4494892
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||| |||||||||| ||||||||||||||||||||    
T  4494936 cctcgtgagcttagctcagttggtatggacaatgcataaaatatg 4494892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 122
Target Start/End: Original strand, 8831201 - 8831241
Alignment:
Q  82 gccctcgtgatcttaactcagttggtttggacaatgcataa 122  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  8831201 gccctcgtgatcttaactcagttggtaaggacaatgcataa 8831241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 16890513 - 16890469
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| ||||||| ||||||| ||||||||||||||||||||    
T  16890513 cctcgtgagcttaacttagttggtatggacaatgcataaaatatg 16890469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 127
Target Start/End: Original strand, 5271389 - 5271432
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatat 127  Q
    |||||||| ||||||||||||||| |||||||| ||||||||||    
T  5271389 cctcgtgaacttaactcagttggtatggacaatacataaaatat 5271432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 85 - 148
Target Start/End: Original strand, 9367398 - 9367461
Alignment:
Q  85 ctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacc 148  Q
    ||||||| |||| || | |||||||||||||||||||||||||| ||| ||||  |||||||||    
T  9367398 ctcgtgagcttagctgaattggtttggacaatgcataaaatatgcaaggtctgggattcaaacc 9367461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 85 - 128
Target Start/End: Original strand, 30579856 - 30579899
Alignment:
Q  85 ctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||    
T  30579856 ctcgtgaacttagctcagttggttgggacaatgcataaaatatg 30579899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 132
Target Start/End: Original strand, 5937630 - 5937676
Alignment:
Q  86 tcgtgatcttaactcagttggtttggacaatgcataaaatatgaaag 132  Q
    |||||| |||| |||||||||||  ||||||||||||||||||||||    
T  5937630 tcgtgagcttagctcagttggttgagacaatgcataaaatatgaaag 5937676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 93 - 159
Target Start/End: Complemental strand, 6864189 - 6864123
Alignment:
Q  93 cttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacctcggtcaccac 159  Q
    |||||||||||||    ||||||||||||| ||||| |||||| || |||||||||||| |||||||    
T  6864189 cttaactcagttgaaaaggacaatgcataatatatgcaagatccgatattcaaacctcgatcaccac 6864123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 128
Target Start/End: Original strand, 7885539 - 7885581
Alignment:
Q  86 tcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||| ||||||||||||||| ||| ||||||||||||||||    
T  7885539 tcgtgagcttaactcagttggtatggtcaatgcataaaatatg 7885581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 128
Target Start/End: Complemental strand, 20847574 - 20847532
Alignment:
Q  86 tcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||| |||| ||||||| |||||||||||||||||||||||    
T  20847574 tcgtgagcttagctcagttagtttggacaatgcataaaatatg 20847532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 128
Target Start/End: Complemental strand, 26320626 - 26320584
Alignment:
Q  86 tcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||| |||| |||||||||| ||||||||||||||||||||    
T  26320626 tcgtgagcttagctcagttggtatggacaatgcataaaatatg 26320584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 128
Target Start/End: Original strand, 1428805 - 1428834
Alignment:
Q  99 tcagttggtttggacaatgcataaaatatg 128  Q
    ||||||||||||||||||||||||||||||    
T  1428805 tcagttggtttggacaatgcataaaatatg 1428834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 20744134 - 20744187
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctg 137  Q
    |||||||| |||| |||||||||| |||||||||||||| ||||| ||| ||||    
T  20744134 cctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtctg 20744187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 331951 - 331883
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacctcgg 152  Q
    |||||||| |||||||||||||||   |||||||||||| ||||| ||| | ||  |||||||||||||    
T  331951 cctcgtgagcttaactcagttggtagagacaatgcataatatatgcaaggtttgggattcaaacctcgg 331883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 361754 - 361794
Alignment:
Q  88 gtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||| ||||||||||||||| |||||||||||||| |||||    
T  361754 gtgagcttaactcagttggtatggacaatgcataatatatg 361794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 2726482 - 2726438
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||| | ||||||||||||||| |||||||||||||| |||||    
T  2726482 cctcgtaaacttaactcagttggtatggacaatgcataatatatg 2726438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 7083057 - 7082993
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacc 148  Q
    |||||||| |||| |||| |||||  ||||||||||||| ||||| |||||||| | ||||||||    
T  7083057 cctcgtgagcttagctcaattggtaaggacaatgcataatatatgcaagatctggagttcaaacc 7082993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 12333633 - 12333589
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||| ||||||| || ||||||||||||||||||||    
T  12333633 cctcgtgagcttagctcagttagtatggacaatgcataaaatatg 12333589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 120
Target Start/End: Original strand, 17278966 - 17279002
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcat 120  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  17278966 cctcgtgagcttaactcagttggtatggacaatgcat 17279002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 21296754 - 21296798
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    ||||||||  ||| ||||||||||| |||||||||||||||||||    
T  21296754 cctcgtgagtttagctcagttggttgggacaatgcataaaatatg 21296798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 28951395 - 28951439
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| ||||||||||||||| || ||||||||||| |||||    
T  28951395 cctcgtgagcttaactcagttggtatgaacaatgcataatatatg 28951439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 31895285 - 31895328
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||    
T  31895285 cctcgtgagcttaactcagttgg-ttggacaatgcatcaaatatg 31895328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 32053784 - 32053828
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||| |||||||||| |||||||||||||| |||||    
T  32053784 cctcgtgagcttagctcagttggtatggacaatgcataatatatg 32053828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 43034407 - 43034332
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacctcggtcaccac 159  Q
    |||||||| ||||||||||||||| |||||||||||||| ||||| ||| |||||  |||||||| ||| ||||||    
T  43034407 cctcgtgagcttaactcagttggtatggacaatgcataatatatgcaaggtctgaggttcaaaccccggccaccac 43034332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 30848043 - 30848003
Alignment:
Q  88 gtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  30848043 gtgagcttaactcagttggtttggacaatgcataaaatatg 30848003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 159
Target Start/End: Complemental strand, 13434957 - 13434891
Alignment:
Q  93 cttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacctcggtcaccac 159  Q
    |||||||||||| ||||||||||||||||||||||| ||| || ||| || ||||  ||||||||||    
T  13434957 cttaactcagttagtttggacaatgcataaaatatgcaaggtccgaagttaaaactccggtcaccac 13434891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 147
Target Start/End: Complemental strand, 50772646 - 50772592
Alignment:
Q  93 cttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaac 147  Q
    |||||||||||||||||||||||||| ||||||||| ||| || || ||||||||    
T  50772646 cttaactcagttggtttggacaatgcgtaaaatatgcaaggtccgagattcaaac 50772592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 86 - 159
Target Start/End: Original strand, 29908054 - 29908127
Alignment:
Q  86 tcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacctcggtcaccac 159  Q
    |||||| |||||||||||||||  ||||||||||||| ||||| ||| || | | ||||||||||| |||||||    
T  29908054 tcgtgagcttaactcagttggtaaggacaatgcataatatatgcaaggtccggagttcaaacctcgatcaccac 29908127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 7030958 - 7030914
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| ||||||||||||||| | ||||||||||||||||||    
T  7030958 cctcgtgagcttaactcagttggtatagacaatgcataaaatatg 7030914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 9946423 - 9946467
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||| |||||||||| ||||||||||||||||||||    
T  9946423 cctcgtgagcttagctcagttggtatggacaatgcataaaatatg 9946467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 12588905 - 12588841
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacc 148  Q
    ||||||| |||||||||||||||| || ||||| ||||||||||  |||||||||  ||||||||    
T  12588905 cctcgtggtcttaactcagttggtatgaacaatacataaaatatataagatctgaggttcaaacc 12588841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 24885865 - 24885821
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| ||||||||||||||| |||||||| |||||||||||    
T  24885865 cctcgtgagcttaactcagttggtatggacaatacataaaatatg 24885821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 30780128 - 30780168
Alignment:
Q  87 cgtgatcttaactcagttggtttggacaatgcataaaatat 127  Q
    ||||| ||||||||||||||| |||||||||||||||||||    
T  30780128 cgtgagcttaactcagttggtatggacaatgcataaaatat 30780168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 38340385 - 38340341
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| ||||||||||||||| |||||||| |||||||||||    
T  38340385 cctcgtgagcttaactcagttggtatggacaatacataaaatatg 38340341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 51002283 - 51002327
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| ||||||||||||||| | ||||||||||||||||||    
T  51002283 cctcgtgagcttaactcagttggtatagacaatgcataaaatatg 51002327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 10303576 - 10303525
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatc 135  Q
    |||||||| |||| ||||||||||  ||||||||||||||||||| ||||||    
T  10303576 cctcgtgagcttagctcagttggtaaggacaatgcataaaatatgcaagatc 10303525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 86 - 137
Target Start/End: Original strand, 16431614 - 16431665
Alignment:
Q  86 tcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctg 137  Q
    |||||| |||| |||||||||| |||||||||||||||||||| ||| ||||    
T  16431614 tcgtgaacttagctcagttggtatggacaatgcataaaatatgcaaggtctg 16431665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 93 - 128
Target Start/End: Original strand, 34303492 - 34303527
Alignment:
Q  93 cttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||||||||||| |||||||||||||||||||    
T  34303492 cttaactcagttggttgggacaatgcataaaatatg 34303527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 138
Target Start/End: Complemental strand, 2186398 - 2186344
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctga 138  Q
    |||||||| |||| |||||||||| |||||||||||||| ||||| ||| |||||    
T  2186398 cctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtctga 2186344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 134
Target Start/End: Original strand, 4916151 - 4916201
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagat 134  Q
    |||||||| |||| ||||||||||||| ||||||||||| ||||| |||||    
T  4916151 cctcgtgaacttagctcagttggtttgaacaatgcataatatatgtaagat 4916201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 148
Target Start/End: Complemental strand, 12757359 - 12757297
Alignment:
Q  86 tcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacc 148  Q
    |||||| ||||||||||||  || ||||||||||||||||||| ||||| ||  |||||||||    
T  12757359 tcgtgagcttaactcagttcattaggacaatgcataaaatatgtaagatttggtattcaaacc 12757297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 93 - 127
Target Start/End: Complemental strand, 30026266 - 30026232
Alignment:
Q  93 cttaactcagttggtttggacaatgcataaaatat 127  Q
    ||||||||||||| |||||||||||||||||||||    
T  30026266 cttaactcagttgatttggacaatgcataaaatat 30026232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 148
Target Start/End: Complemental strand, 40071031 - 40070969
Alignment:
Q  86 tcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacc 148  Q
    |||||| ||||||||||||||| || ||||||||||| ||||| ||| || ||| ||||||||    
T  40071031 tcgtgagcttaactcagttggtatgaacaatgcataatatatgcaaggtccgaagttcaaacc 40070969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 128
Target Start/End: Complemental strand, 55421632 - 55421590
Alignment:
Q  86 tcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||| |||| ||||||||||||||||||||||||| |||||    
T  55421632 tcgtgagcttagctcagttggtttggacaatgcataatatatg 55421590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 11198760 - 11198813
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctg 137  Q
    |||||||| |||| |||||||||| |||| ||||||||||||||| ||| ||||    
T  11198760 cctcgtgagcttagctcagttggtatggagaatgcataaaatatgtaaggtctg 11198813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 150
Target Start/End: Original strand, 36638623 - 36638680
Alignment:
Q  93 cttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacctc 150  Q
    |||| ||||||||||| ||||||||||||||||||| ||| | | || ||||||||||    
T  36638623 cttatctcagttggttgggacaatgcataaaatatgcaaggtttaaagttcaaacctc 36638680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 52132367 - 52132314
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctg 137  Q
    |||||||| | || ||||||||||||||||||||||||| ||||| ||| ||||    
T  52132367 cctcgtgagcatagctcagttggtttggacaatgcataatatatgcaaggtctg 52132314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 52270095 - 52270042
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctg 137  Q
    |||||||| |||| |||||||||| |||||||||||||| ||||| ||| ||||    
T  52270095 cctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtctg 52270042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 1756971 - 1757015
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| ||||||||||||  || |||||||||||||||||||    
T  1756971 cctcgtgagcttaactcagttcattgggacaatgcataaaatatg 1757015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 159
Target Start/End: Original strand, 7230271 - 7230351
Alignment:
Q  79 gttgccctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacctcggtcaccac 159  Q
    |||| |||||||| |||| ||||||||||  ||||||||||||| ||||| ||| || |   |||||||||||| ||||||    
T  7230271 gttgtcctcgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggtccggggttcaaacctcggccaccac 7230351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 8020712 - 8020668
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| | || ||||||||||||||||||||||||| |||||    
T  8020712 cctcgtgagcatagctcagttggtttggacaatgcataatatatg 8020668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 9539258 - 9539214
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||| |||||||| | ||||||||||||||||||||    
T  9539258 cctcgtgagcttagctcagttgttatggacaatgcataaaatatg 9539214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 148
Target Start/End: Original strand, 9913895 - 9913959
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacc 148  Q
    |||||||| |||| |||||||||| || ||||||||||||||||  |||||  | ||||||||||    
T  9913895 cctcgtgagcttagctcagttggtatgaacaatgcataaaatatacaagattcggaattcaaacc 9913959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 148
Target Start/End: Original strand, 13121540 - 13121604
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacc 148  Q
    |||||||| |||| || |||||||  ||||||||||||| ||||| ||| |||||| ||||||||    
T  13121540 cctcgtgagcttagcttagttggtagggacaatgcataatatatgcaaggtctgaagttcaaacc 13121604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 14202544 - 14202500
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| ||||||||||||| |||||| ||||||||| |||||    
T  14202544 cctcgtgagcttaactcagttgatttggataatgcataatatatg 14202500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 15170164 - 15170120
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| ||||||||||||||| || ||||||||||| |||||    
T  15170164 cctcgtgaacttaactcagttggtatgaacaatgcataatatatg 15170120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 15849230 - 15849274
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||| |||||||||| |||| |||||||||||||||    
T  15849230 cctcgtgagcttagctcagttggtatggataatgcataaaatatg 15849274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 19588150 - 19588194
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||| |||| ||||| ||||||||||||||||||||    
T  19588150 cctcgtgagcttagctcaattggtatggacaatgcataaaatatg 19588194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 21991312 - 21991268
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||| || ||||||| ||||||||||||||||||||    
T  21991312 cctcgtgagcttatcttagttggtatggacaatgcataaaatatg 21991268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 32180826 - 32180870
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||| |||||||||| | ||||||||||||||||||    
T  32180826 cctcgtgagcttagctcagttggtatagacaatgcataaaatatg 32180870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 136
Target Start/End: Complemental strand, 32430188 - 32430136
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatct 136  Q
    |||||||| |||||||||||| || || ||||||||||||||||  |||||||    
T  32430188 cctcgtgagcttaactcagttagtatgaacaatgcataaaatatacaagatct 32430136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 35287572 - 35287528
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||| |||||||||| || |||||||||||||||||    
T  35287572 cctcgtgagcttagctcagttggtatgaacaatgcataaaatatg 35287528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 159
Target Start/End: Original strand, 38374956 - 38375028
Alignment:
Q  87 cgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacctcggtcaccac 159  Q
    ||||| ||||||| |||||||  ||||||||||||| ||||| ||| |||| | |||||||| ||| ||||||    
T  38374956 cgtgagcttaacttagttggtagggacaatgcataatatatgcaaggtctggagttcaaaccccggccaccac 38375028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 39171435 - 39171391
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||| |||||||| | ||||||||||||||||||||    
T  39171435 cctcgtgagcttagctcagttgatatggacaatgcataaaatatg 39171391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 39842077 - 39842033
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||||||||||||||||| |  ||||||||||||| |||||    
T  39842077 cctcgtgatcttaactcagttgataaggacaatgcataatatatg 39842033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 43374337 - 43374293
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||| |||||||| | ||||||||||||||||||||    
T  43374337 cctcgtgagcttagctcagttgatatggacaatgcataaaatatg 43374293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 43722761 - 43722805
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    ||||||||  |||||||||||||| |||||||||||||| |||||    
T  43722761 cctcgtgagtttaactcagttggtatggacaatgcataatatatg 43722805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 86 - 138
Target Start/End: Original strand, 44221445 - 44221497
Alignment:
Q  86 tcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctga 138  Q
    |||||| ||||| ||||||||| |||||||||||||| ||||| ||| |||||    
T  44221445 tcgtgagcttaattcagttggtatggacaatgcataatatatgcaaggtctga 44221497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 32843327 - 32843252
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacctcggtcaccac 159  Q
    |||||||| |||| ||||||||||||||||||||||||||||||| ||| ||||   |||||||| ||| ||||||    
T  32843327 cctcgtgagcttagctcagttggtttggacaatgcataaaatatgcaaggtctggggttcaaaccccggccaccac 32843252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 135
Target Start/End: Original strand, 14827522 - 14827572
Alignment:
Q  85 ctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatc 135  Q
    ||||||| |||| |||||||||| |||||||||||||||||||| ||||||    
T  14827522 ctcgtgagcttagctcagttggtatggacaatgcataaaatatgcaagatc 14827572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 138
Target Start/End: Original strand, 47943294 - 47943348
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctga 138  Q
    |||||||| |||||||||||||||| ||||| ||||||||||||| ||| |||||    
T  47943294 cctcgtgagcttaactcagttggttgggacagtgcataaaatatgcaaggtctga 47943348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 21506823 - 21506770
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctg 137  Q
    |||||||| |||| |||||||||| |||||||||||||||||||| ||| ||||    
T  21506823 cctcgtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtctg 21506770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 93 - 134
Target Start/End: Original strand, 44968182 - 44968223
Alignment:
Q  93 cttaactcagttggtttggacaatgcataaaatatgaaagat 134  Q
    ||||||||||||||| |||||||||||||||||||| |||||    
T  44968182 cttaactcagttggtatggacaatgcataaaatatgtaagat 44968223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 7738665 - 7738709
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||||||||||||||  |||||||||||||||||||    
T  7738665 cctcgtgagcttaactcagttggtagggacaatgcataaaatatg 7738709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 8127459 - 8127503
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||||||||||||||  |||||||||||||||||||    
T  8127459 cctcgtgagcttaactcagttggtaaggacaatgcataaaatatg 8127503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 25340989 - 25340945
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||| |||||||||| ||||||||||||||||||||    
T  25340989 cctcgtgagcttagctcagttggtatggacaatgcataaaatatg 25340945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 28244169 - 28244125
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| ||||||||||||||| || |||||||||||||||||    
T  28244169 cctcgtgagcttaactcagttggtatgaacaatgcataaaatatg 28244125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 44579632 - 44579676
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||| |||||||||| ||||||||||||||||||||    
T  44579632 cctcgtgagcttagctcagttggtatggacaatgcataaaatatg 44579676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 135
Target Start/End: Complemental strand, 51882262 - 51882214
Alignment:
Q  87 cgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatc 135  Q
    ||||| ||||||||||||||| |||||||||||||| ||||| ||||||    
T  51882262 cgtgagcttaactcagttggtatggacaatgcataatatatgcaagatc 51882214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 10498760 - 10498685
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacctcggtcaccac 159  Q
    |||||||| |||| |||||||||| |||||||||||||| ||||| ||| ||   | |||||||||||| ||||||    
T  10498760 cctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtcatgagttcaaacctcggccaccac 10498685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 85 - 128
Target Start/End: Complemental strand, 32909365 - 32909322
Alignment:
Q  85 ctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    ||||||| |||||||||||| || ||||||||||||||||||||    
T  32909365 ctcgtgagcttaactcagttagtatggacaatgcataaaatatg 32909322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 51250298 - 51250223
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacctcggtcaccac 159  Q
    |||||||| |||||||||||||||  |||||||| |||| ||||| |||  ||||| |||||||| || |||||||    
T  51250298 cctcgtgagcttaactcagttggtaaggacaatgtataatatatgcaaggcctgaagttcaaaccccgatcaccac 51250223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 93 - 151
Target Start/End: Original strand, 544759 - 544817
Alignment:
Q  93 cttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacctcg 151  Q
    |||||||| ||||||| ||||||||||||||||||| ||| ||||   |||||||||||    
T  544759 cttaactcggttggttgggacaatgcataaaatatgcaaggtctggtgttcaaacctcg 544817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 7557599 - 7557561
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataa 122  Q
    |||||||| ||||||||||||||| ||||||||||||||    
T  7557599 cctcgtgagcttaactcagttggtatggacaatgcataa 7557561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 17588361 - 17588411
Alignment:
Q  87 cgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctg 137  Q
    ||||| |||||||||||||||  ||||||||||||| ||||| ||||||||    
T  17588361 cgtgagcttaactcagttggtaaggacaatgcataatatatgcaagatctg 17588411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 128
Target Start/End: Complemental strand, 23316428 - 23316386
Alignment:
Q  86 tcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||| |||| ||||||||||| |||||||||||||||||||    
T  23316428 tcgtgagcttacctcagttggttgggacaatgcataaaatatg 23316386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 138
Target Start/End: Complemental strand, 30912881 - 30912827
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctga 138  Q
    |||||||| ||||||| ||||||| |||||||| ||||||||||| ||| |||||    
T  30912881 cctcgtgagcttaacttagttggtatggacaattcataaaatatgcaaggtctga 30912827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 128
Target Start/End: Original strand, 32836171 - 32836213
Alignment:
Q  86 tcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||| |||| |||||||||| ||||||||||||||||||||    
T  32836171 tcgtgagcttagctcagttggtatggacaatgcataaaatatg 32836213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 134
Target Start/End: Original strand, 39481137 - 39481187
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagat 134  Q
    |||||||| |||| |||||||||| ||||||||||||||| |||| |||||    
T  39481137 cctcgtgagcttagctcagttggtatggacaatgcataaattatgtaagat 39481187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 25874127 - 25874164
Alignment:
Q  85 ctcgtgatcttaactcagttggtttggacaatgcataa 122  Q
    ||||||| ||||||||||||||| ||||||||||||||    
T  25874127 ctcgtgagcttaactcagttggtatggacaatgcataa 25874164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 32484284 - 32484325
Alignment:
Q  94 ttaactcagttggtttggacaatgcataaaatatgaaagatc 135  Q
    |||||||||||||| |||||||||| ||||||||| ||||||    
T  32484284 ttaactcagttggtatggacaatgcttaaaatatgcaagatc 32484325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 32629079 - 32629120
Alignment:
Q  87 cgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    ||||| |||| |||||||||| ||||||||||||||||||||    
T  32629079 cgtgagcttagctcagttggtatggacaatgcataaaatatg 32629120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 151
Target Start/End: Complemental strand, 43399213 - 43399160
Alignment:
Q  98 ctcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacctcg 151  Q
    ||||||||||| ||||||| ||||||||||| ||| ||||  ||||||||||||    
T  43399213 ctcagttggttgggacaatacataaaatatgcaaggtctgggattcaaacctcg 43399160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 54018476 - 54018427
Alignment:
Q  79 gttgccctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||| |||||| | ||||||| ||||||| ||||||||||||||||||||    
T  54018476 gttgtcctcgtaaccttaacttagttggtatggacaatgcataaaatatg 54018427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 93 - 137
Target Start/End: Complemental strand, 2153557 - 2153513
Alignment:
Q  93 cttaactcagttggtttggacaatgcataaaatatgaaagatctg 137  Q
    ||||| |||||||||||||||||||||||| ||||| ||| ||||    
T  2153557 cttaattcagttggtttggacaatgcataatatatgcaaggtctg 2153513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 2186491 - 2186439
Alignment:
Q  85 ctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctg 137  Q
    ||||||| ||||||||||||||| |||||||| ||||| ||||| ||| ||||    
T  2186491 ctcgtgaacttaactcagttggtatggacaatacataatatatgtaaggtctg 2186439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 3100217 - 3100261
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||| |||||||||| |||||||||||||| |||||    
T  3100217 cctcgtgagcttagctcagttggtgtggacaatgcataacatatg 3100261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 7464556 - 7464512
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||||||||||||||  ||||||||||||| |||||    
T  7464556 cctcgtgagcttaactcagttggtagggacaatgcataatatatg 7464512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 9321466 - 9321426
Alignment:
Q  88 gtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||| |||| ||||||||||||||||||||||||| |||||    
T  9321466 gtgagcttagctcagttggtttggacaatgcataatatatg 9321426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 135
Target Start/End: Complemental strand, 10922370 - 10922322
Alignment:
Q  87 cgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatc 135  Q
    ||||| |||||||||||||||  ||||||||||||| ||||| ||||||    
T  10922370 cgtgagcttaactcagttggtagggacaatgcataatatatgcaagatc 10922322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 19468451 - 19468491
Alignment:
Q  88 gtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||| ||||||||||||||| |||||||||||||| |||||    
T  19468451 gtgagcttaactcagttggtatggacaatgcataatatatg 19468491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 20370346 - 20370302
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||| |||||||| | ||||||||||||||||||||    
T  20370346 cctcgtgagcttagctcagttgatatggacaatgcataaaatatg 20370302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 148
Target Start/End: Original strand, 26768397 - 26768461
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacc 148  Q
    |||||||| |||| ||||| |||| | |||||||||||||||||| ||| |||||  ||||||||    
T  26768397 cctcgtgagcttatctcagctggtatagacaatgcataaaatatgcaaggtctgagcttcaaacc 26768461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 38131020 - 38130980
Alignment:
Q  88 gtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||| ||||||||||||||| |||||||||||||| |||||    
T  38131020 gtgagcttaactcagttggtatggacaatgcataatatatg 38130980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 46903904 - 46903948
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    ||||||||  |||||||||||||| |||||||||||||| |||||    
T  46903904 cctcgtgagattaactcagttggtatggacaatgcataatatatg 46903948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 48796283 - 48796239
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||| ||||||| ||||||||||||||||| |||||    
T  48796283 cctcgtgagcttagctcagttagtttggacaatgcataagatatg 48796239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 53365900 - 53365944
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| ||||||||| |||||||||||||| ||| |||||||    
T  53365900 cctcgtgagcttaactcaattggtttggacaatacatgaaatatg 53365944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 84 - 158
Target Start/End: Original strand, 185259 - 185333
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacctcggtcacca 158  Q
    |||||||| |||| |||||||||| |||||||||||||||||||| |||||| |   |||||||| |||||||||    
T  185259 cctcgtgagcttagctcagttggtatggacaatgcataaaatatgcaagatccggggttcaaaccccggtcacca 185333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 134
Target Start/End: Original strand, 223154 - 223204
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagat 134  Q
    |||||||| |||| |||||||||| |||||||| ||||||||||| |||||    
T  223154 cctcgtgagcttagctcagttggtatggacaatacataaaatatgcaagat 223204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 84 - 148
Target Start/End: Original strand, 118815 - 118879
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaacc 148  Q
    |||||||| |||| ||||||||||||| ||||||||||||||||| ||| |||| | ||||||||    
T  118815 cctcgtgagcttagctcagttggtttgaacaatgcataaaatatgtaaggtctggagttcaaacc 118879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 45408 - 45452
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||||||| |||||||||||||||||||||||| ||||| |||||    
T  45408 cctcgtgagcttaactcagttggtttggacaatacataatatatg 45452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 7471 - 7523
Alignment:
Q  85 ctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctg 137  Q
    ||||||| ||||||||| ||||| || ||||||||||||||||| ||||||||    
T  7471 ctcgtgagcttaactcaattggtatgaacaatgcataaaatatgtaagatctg 7523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 161141 - 161181
Alignment:
Q  88 gtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||| ||||||||||||||| ||||||||||||||||||||    
T  161141 gtgagcttaactcagttggtatggacaatgcataaaatatg 161181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 86 - 137
Target Start/End: Complemental strand, 47304 - 47253
Alignment:
Q  86 tcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctg 137  Q
    |||||| |||| |||||||||| |||||||||||||||||||| ||| ||||    
T  47304 tcgtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtctg 47253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 147
Target Start/End: Original strand, 171155 - 171218
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctgaaattcaaac 147  Q
    |||||||| |||| ||| ||||||||| ||||||||||||||||| ||||| || | |||||||    
T  171155 cctcgtgagcttagctcggttggtttgaacaatgcataaaatatgcaagatttggagttcaaac 171218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 208938 - 208976
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataa 122  Q
    |||||||| |||| |||||||||||||||||||||||||    
T  208938 cctcgtgagcttagctcagttggtttggacaatgcataa 208976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 189656 - 189618
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataa 122  Q
    |||||||| ||||||||||||||| ||||||||||||||    
T  189656 cctcgtgaacttaactcagttggtatggacaatgcataa 189618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0735 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0735
Description:

Target: scaffold0735; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 1527 - 1568
Alignment:
Q  87 cgtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    ||||| |||| |||||||||| ||||||||||||||||||||    
T  1527 cgtgagcttagctcagttggtatggacaatgcataaaatatg 1568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 53445 - 53392
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcataaaatatgaaagatctg 137  Q
    |||||||| ||||||||||||||   ||||||||||||||||||| ||| ||||    
T  53445 cctcgtgagcttaactcagttggaagggacaatgcataaaatatgcaaggtctg 53392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0458 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0458
Description:

Target: scaffold0458; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 11217 - 11141
Alignment:
Q  84 cctcgtgatcttaactcagttggtttggacaatgcat-aaaatatgaaagatctgaaattcaaacctcggtcaccac 159  Q
    |||||||| ||||  ||||||||| |||||||||||| |||||||| ||| ||||  ||||||||| ||| ||||||    
T  11217 cctcgtgagcttagatcagttggtatggacaatgcataaaaatatgcaaggtctgggattcaaaccccggccaccac 11141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 50996 - 51036
Alignment:
Q  88 gtgatcttaactcagttggtttggacaatgcataaaatatg 128  Q
    |||| |||||||| ||||||||| |||||||||||||||||    
T  50996 gtgagcttaactccgttggtttgaacaatgcataaaatatg 51036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University