View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8566_high_24 (Length: 243)
Name: NF8566_high_24
Description: NF8566
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8566_high_24 |
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Alignment Details
Target: chr8 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 16 - 236
Target Start/End: Complemental strand, 10441825 - 10441605
Alignment:
| Q |
16 |
acaccaacgttagatagaagaatcgttaaaccccattttatgtttctttgtttttgtttaccatcaccaacatcaacactgtcgctaatttccaacatca |
115 |
Q |
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| T |
10441825 |
acaccaacgttagatagaagaatcgttaaaccccattttatgtttctttgtttttgtttaccatcaccaacatcaacactgtcactaatttccaacatca |
10441726 |
T |
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| Q |
116 |
acatgtcagagaagaccttaaacaagaacaagacccgaaagcgtaacattaatagtgtcaccaaaaagacaccaactttggtaaaaacagaagacataga |
215 |
Q |
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| T |
10441725 |
acatgtcagagaagaccttaaacaagaacaagacccgaaagcgtaacattaatagtgtcaccaaaaagacaccaactttggtaaaaacagaagacataga |
10441626 |
T |
|
| Q |
216 |
agattcaccatcattcttctc |
236 |
Q |
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||||||||||||||||||||| |
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| T |
10441625 |
agattcaccatcattcttctc |
10441605 |
T |
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