View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8567_high_6 (Length: 250)
Name: NF8567_high_6
Description: NF8567
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8567_high_6 |
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Alignment Details
Target: chr2 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 8 - 232
Target Start/End: Complemental strand, 37827026 - 37826802
Alignment:
| Q |
8 |
tcagcggcaaccgactcaatccaattcatcacccaccactgtgaagtcacaaatcgaaaagtaaccgaccaccgtggttgtgcctatagtggtttttaga |
107 |
Q |
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| T |
37827026 |
tcagcggcaactgactcaatccaattcatcacccaccactgtgaagtcacaaatcgaaaagtaaccgaccaccgtggttgtgcctatagtggtttttaga |
37826927 |
T |
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| Q |
108 |
accaaaacgaaaagtacaaatgtgaaacggtgcgaaccaccaaagcacattttgtaatagaaccaacaagatccggcaatgaatcttcaaggtggcgacg |
207 |
Q |
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| T |
37826926 |
accaaaacaaaaagtacaaatgtgaaacagtgcgaaccaccaaagcacattttgtaatagaaccaacaagatccggcaatgaatcttcaaggtggcgacg |
37826827 |
T |
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| Q |
208 |
ttgtagcaagatgttcgtcgtcgtt |
232 |
Q |
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| T |
37826826 |
tcgtagcaaggtgttcgtcgtcgtt |
37826802 |
T |
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