View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8567_low_7 (Length: 294)
Name: NF8567_low_7
Description: NF8567
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8567_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 18 - 276
Target Start/End: Original strand, 35361683 - 35361941
Alignment:
| Q |
18 |
ttttcaaatctgttgaattctgcttatttccatagacaaggttctgcgtcgttgttgtttgagtatccacttagtccttgttaccgacttcgaaatgctt |
117 |
Q |
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| T |
35361683 |
ttttcaaatatgttgaattctgcttatttccatagacaaggttttgcgtcgttgttgtttgagtatccacttagtccttgttaccgacttcgaaatgctt |
35361782 |
T |
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| Q |
118 |
tactatcctagtcatttgtatgattgacattggactcgaaagagtcagtatttcttattgtcatcgttgcaaggagtatttcgttcttggactctcgtgt |
217 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35361783 |
tactatcctagtcatttgtatgattgacattggactcaaaagagtcagtatttcttattgtcatcgttgcaaggagtatttcgttcttggactctcgtgt |
35361882 |
T |
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| Q |
218 |
taacagacgatcaataaaccagtttgtggacctctaattagtgcttgttatgataaact |
276 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35361883 |
taacagacgatcaataaaccagtttgtggacctctaattagtgcttgttatgataaact |
35361941 |
T |
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