View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8567_low_9 (Length: 250)
Name: NF8567_low_9
Description: NF8567
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8567_low_9 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 16 - 250
Target Start/End: Original strand, 35361308 - 35361542
Alignment:
| Q |
16 |
accttgagatgagtacagtataagatcttaagccattagggttcaacttcaattgacccctctgaaccttaaaaaatgtaaaacaatactcttatgtatt |
115 |
Q |
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| T |
35361308 |
accttgagatgagtacagtataagatcttaagccattagggttcaacttcaattgacccctctgaaaccttaaaaatgtaaaacaatactcttatgtatt |
35361407 |
T |
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| Q |
116 |
ttgcatttcaaaccccactaatttagaggtccaagctccagacagttttcccaaccactcacgtcgtcttctttatggttgttgtcattctacaaggtgt |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |
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| T |
35361408 |
ttgcatttcaaaccccactaatttagaggtccaagctccatacagttttcccaaccactcgcgtcgtcttccttatggttgttgtcattctacaaggtgt |
35361507 |
T |
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| Q |
216 |
gcaaagggttagtcatgtggtgacgcatccagatc |
250 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
35361508 |
gcaaagggttagtcatgtggtgacgcatccagatc |
35361542 |
T |
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