View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8568_low_10 (Length: 232)
Name: NF8568_low_10
Description: NF8568
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8568_low_10 |
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Alignment Details
Target: chr6 (Bit Score: 141; Significance: 5e-74; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 11522611 - 11522793
Alignment:
| Q |
15 |
atgaaatcaatatttgtgtttagtttatctaatatttaaaattaatgagatattaattgtannnnnnnnnn-atcatttctttaattaataaagcataca |
113 |
Q |
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| T |
11522611 |
atgaaatcaatatttgtgtttagtttatctaatattttaaattaatgagatattaattgtattttttttattatcatttctttaattaataaagcataca |
11522710 |
T |
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| Q |
114 |
ttcacccatgttcgattcgtttgtaattgcttctttttattaattgattcaaacaagttaattcgcaacaacattaaaagtta |
196 |
Q |
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| T |
11522711 |
ttcacccatgttcgattcgtttgtaattgcttctttttattaattgattcaaacaagttaattcgcaacaacattaaaagtta |
11522793 |
T |
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