View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8570_high_13 (Length: 247)
Name: NF8570_high_13
Description: NF8570
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8570_high_13 |
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Alignment Details
Target: chr4 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 43789955 - 43789720
Alignment:
| Q |
1 |
tagtgtctgttgcatcagcatcattacttagtgttgcaacaaaagaagtattaagaatggtcaataacagaagaaaattgcacaaccaatatgaatatat |
100 |
Q |
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| T |
43789955 |
tagtgtctgttgcatcagcatcattacttagtgttgcaacaaaagaagtattaagaatggtcaataacagaagaaaattgcacaaccaatatgaatatat |
43789856 |
T |
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| Q |
101 |
ttgtttcattatgaggtatagatacaaggtcaaatggttcaaaagatatgctctaaaaataaggatcaagttttagtagcatgataaaacaaagtaaatg |
200 |
Q |
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| T |
43789855 |
ttgtttcattatgaggtatagatacaaggtcaaatggttcaaaagatatgctctaaaaataaggatcaagttttagtagcatgataaaacaaagtaaatg |
43789756 |
T |
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| Q |
201 |
aagaataggataataaggaagacaatgacacaggtt |
236 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
43789755 |
aagaataggataataaggaagacaatgacacaggtt |
43789720 |
T |
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