View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8570_high_2 (Length: 432)
Name: NF8570_high_2
Description: NF8570
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8570_high_2 |
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Alignment Details
Target: chr4 (Bit Score: 408; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 408; E-Value: 0
Query Start/End: Original strand, 1 - 424
Target Start/End: Original strand, 21358630 - 21359053
Alignment:
| Q |
1 |
acagtacaggttttggggatgtgctgatgcaacaggggtagccgatagcttttattatccacactttctctgataaatcaaaactgatatatgtatatga |
100 |
Q |
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| T |
21358630 |
acagtacaggttttggggctgtgctgatgcaacaggggtagccgatagcttttattatccacactttctctgataaatcaaaactgatatatgtatatga |
21358729 |
T |
|
| Q |
101 |
actggaactcatgataattgtctgtgtatacttgtacataaatggggccagtactttctagggaaaagagttttggagtgaacaacagtaattggtgccc |
200 |
Q |
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| T |
21358730 |
actggaactcatgataattgtctgtgtacacttgtacataaatggggccagtactttctagggaaaagagttttggagtgaacaacagtaattggtgccc |
21358829 |
T |
|
| Q |
201 |
aagatattgagatatgatttcgaacttgaatatgaaagcggaaatggaaattgagcagctgatgctttgtctagaatggtagctaggaaacacaattgtt |
300 |
Q |
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| T |
21358830 |
aagatattgagatatgattttgaacttgaatatgaaagcggaaatggaaattgagcagctgatgctttgtctagaatggtagctaggaaacacaattgtt |
21358929 |
T |
|
| Q |
301 |
aaggtgggaaacacaattgttaagggcaaacctacatgctctgacaatagatccaaatgctcatccaggcttctccttttctaaggtgtgtttgtggtgt |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
21358930 |
aaggtgggaaacacaattgttaagggcaaacctacatgctctgacaatagatccaaatgctcatccaggcttctccttttctaaggtgtgtttgtggtat |
21359029 |
T |
|
| Q |
401 |
aagggagggaatagtggtgatgtc |
424 |
Q |
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| T |
21359030 |
aagggagggaatagtggtgatgtc |
21359053 |
T |
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