View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8570_low_11 (Length: 313)

Name: NF8570_low_11
Description: NF8570
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8570_low_11
NF8570_low_11
[»] chr6 (27 HSPs)
chr6 (1-195)||(27272829-27273023)
chr6 (1-195)||(27629955-27630149)
chr6 (49-193)||(20160508-20160652)
chr6 (49-193)||(22172179-22172323)
chr6 (70-188)||(28162485-28162603)
chr6 (70-188)||(13522323-13522441)
chr6 (70-188)||(33374506-33374624)
chr6 (106-193)||(22935125-22935212)
chr6 (106-193)||(23857570-23857657)
chr6 (106-176)||(4525150-4525220)
chr6 (70-188)||(8892560-8892678)
chr6 (108-193)||(22477521-22477606)
chr6 (106-158)||(4757622-4757674)
chr6 (106-158)||(4772858-4772910)
chr6 (106-158)||(27360293-27360345)
chr6 (106-158)||(27450636-27450688)
chr6 (252-300)||(27629853-27629901)
chr6 (106-158)||(29549339-29549391)
chr6 (106-149)||(16673988-16674031)
chr6 (106-159)||(16944309-16944362)
chr6 (106-159)||(27484978-27485031)
chr6 (106-159)||(29572874-29572927)
chr6 (106-158)||(4546067-4546119)
chr6 (106-158)||(4724426-4724478)
chr6 (106-158)||(17025123-17025175)
chr6 (106-158)||(27044251-27044303)
chr6 (106-158)||(28207303-28207355)
[»] chr7 (23 HSPs)
chr7 (52-180)||(16450199-16450327)
chr7 (49-182)||(16041134-16041267)
chr7 (49-193)||(16503571-16503715)
chr7 (49-193)||(16518607-16518751)
chr7 (70-188)||(31088657-31088775)
chr7 (70-188)||(45733292-45733410)
chr7 (49-158)||(5159330-5159439)
chr7 (106-158)||(31564625-31564677)
chr7 (106-149)||(3445159-3445202)
chr7 (106-193)||(5127857-5127944)
chr7 (106-193)||(5147531-5147618)
chr7 (106-193)||(26435122-26435209)
chr7 (106-149)||(26485979-26486022)
chr7 (106-149)||(26538108-26538151)
chr7 (106-188)||(11424972-11425054)
chr7 (106-159)||(9618516-9618569)
chr7 (106-159)||(24592766-24592819)
chr7 (106-159)||(26275319-26275372)
chr7 (106-159)||(26320094-26320147)
chr7 (106-159)||(26670139-26670192)
chr7 (106-158)||(4145349-4145401)
chr7 (106-158)||(10917091-10917143)
chr7 (106-158)||(45387208-45387260)
[»] chr4 (18 HSPs)
chr4 (49-188)||(1900082-1900221)
chr4 (49-189)||(15227695-15227835)
chr4 (51-158)||(24112489-24112596)
chr4 (51-158)||(34189297-34189404)
chr4 (106-149)||(33674159-33674202)
chr4 (70-188)||(24460912-24461030)
chr4 (106-158)||(14763644-14763696)
chr4 (106-158)||(18800962-18801014)
chr4 (106-158)||(19373140-19373192)
chr4 (106-158)||(36344852-36344904)
chr4 (106-193)||(5005749-5005836)
chr4 (106-193)||(6569732-6569819)
chr4 (49-188)||(14664840-14664979)
chr4 (106-193)||(30753621-30753708)
chr4 (106-149)||(39850502-39850545)
chr4 (106-159)||(40105977-40106030)
chr4 (106-155)||(54833269-54833318)
chr4 (106-158)||(27163657-27163709)
[»] scaffold0124 (1 HSPs)
scaffold0124 (49-188)||(20219-20358)
[»] chr5 (36 HSPs)
chr5 (49-188)||(22888289-22888428)
chr5 (70-188)||(11325634-11325752)
chr5 (70-188)||(13184852-13184970)
chr5 (70-188)||(13440698-13440816)
chr5 (70-188)||(33877087-33877205)
chr5 (1-178)||(25198800-25198977)
chr5 (49-188)||(23892022-23892161)
chr5 (103-158)||(33292398-33292453)
chr5 (106-158)||(3789399-3789451)
chr5 (106-158)||(13325081-13325133)
chr5 (106-158)||(24681310-24681362)
chr5 (106-158)||(24723837-24723889)
chr5 (106-158)||(28649099-28649151)
chr5 (113-193)||(41674589-41674669)
chr5 (106-193)||(9548745-9548832)
chr5 (106-193)||(24969897-24969984)
chr5 (106-149)||(40473798-40473841)
chr5 (106-188)||(22999321-22999403)
chr5 (106-159)||(2510924-2510977)
chr5 (106-159)||(5637783-5637836)
chr5 (106-159)||(9317324-9317377)
chr5 (106-159)||(12132028-12132081)
chr5 (106-159)||(15759093-15759146)
chr5 (106-159)||(26480265-26480318)
chr5 (106-159)||(29967302-29967355)
chr5 (106-159)||(30029288-30029341)
chr5 (106-159)||(30151891-30151944)
chr5 (106-159)||(31826655-31826708)
chr5 (106-159)||(37754841-37754894)
chr5 (106-159)||(37771235-37771288)
chr5 (106-158)||(6874175-6874227)
chr5 (106-158)||(28960035-28960087)
chr5 (106-158)||(32599706-32599758)
chr5 (106-158)||(34616394-34616446)
chr5 (106-158)||(37358892-37358944)
chr5 (106-158)||(37671729-37671781)
[»] chr2 (24 HSPs)
chr2 (49-188)||(21703460-21703599)
chr2 (70-188)||(31891624-31891742)
chr2 (70-188)||(3784481-3784599)
chr2 (70-188)||(34156838-34156956)
chr2 (70-187)||(34303600-34303717)
chr2 (106-158)||(37375021-37375073)
chr2 (109-188)||(27118554-27118633)
chr2 (70-188)||(16163426-16163544)
chr2 (106-158)||(12716934-12716986)
chr2 (106-193)||(11635483-11635570)
chr2 (106-193)||(11641672-11641759)
chr2 (106-149)||(39052166-39052209)
chr2 (106-149)||(40233359-40233402)
chr2 (106-159)||(19416827-19416880)
chr2 (106-159)||(22926356-22926409)
chr2 (106-159)||(31876141-31876194)
chr2 (106-159)||(34861540-34861593)
chr2 (106-159)||(37686237-37686290)
chr2 (106-159)||(37701502-37701555)
chr2 (106-158)||(13936873-13936925)
chr2 (106-158)||(32049658-32049710)
chr2 (106-158)||(34279309-34279361)
chr2 (106-158)||(37925353-37925405)
chr2 (106-158)||(39889922-39889974)
[»] scaffold0260 (1 HSPs)
scaffold0260 (70-188)||(2965-3083)
[»] chr8 (13 HSPs)
chr8 (70-188)||(44562932-44563050)
chr8 (70-188)||(9354453-9354571)
chr8 (70-188)||(19659305-19659423)
chr8 (49-193)||(16283256-16283400)
chr8 (106-188)||(18710450-18710532)
chr8 (106-158)||(19518442-19518494)
chr8 (106-159)||(19208658-19208711)
chr8 (106-155)||(19286329-19286378)
chr8 (106-159)||(28362253-28362306)
chr8 (106-159)||(33258587-33258640)
chr8 (106-158)||(12093032-12093084)
chr8 (106-158)||(29829177-29829229)
chr8 (106-158)||(31354388-31354440)
[»] chr1 (6 HSPs)
chr1 (70-188)||(20340642-20340760)
chr1 (106-158)||(41793648-41793700)
chr1 (49-188)||(20460914-20461053)
chr1 (106-159)||(10962533-10962586)
chr1 (106-159)||(28584844-28584897)
chr1 (106-158)||(51638081-51638133)
[»] chr3 (33 HSPs)
chr3 (51-158)||(32438927-32439034)
chr3 (70-188)||(17994132-17994250)
chr3 (70-187)||(4625736-4625853)
chr3 (103-158)||(4893035-4893090)
chr3 (49-158)||(8211509-8211618)
chr3 (106-158)||(5466810-5466862)
chr3 (106-158)||(18277433-18277485)
chr3 (106-158)||(18292734-18292786)
chr3 (106-158)||(18308035-18308087)
chr3 (106-158)||(29665366-29665418)
chr3 (49-188)||(16626854-16626993)
chr3 (106-149)||(21674518-21674561)
chr3 (106-193)||(28116303-28116390)
chr3 (106-149)||(48465740-48465783)
chr3 (106-149)||(51781836-51781879)
chr3 (106-149)||(51796925-51796968)
chr3 (106-159)||(5013537-5013590)
chr3 (40-153)||(18530156-18530269)
chr3 (49-158)||(22387956-22388065)
chr3 (41-158)||(22871255-22871372)
chr3 (41-158)||(22886314-22886431)
chr3 (106-159)||(24327984-24328037)
chr3 (106-159)||(28339127-28339180)
chr3 (106-159)||(31964853-31964906)
chr3 (106-159)||(50134451-50134504)
chr3 (106-158)||(4347065-4347117)
chr3 (107-159)||(5609702-5609754)
chr3 (106-158)||(6542855-6542907)
chr3 (106-158)||(7073037-7073089)
chr3 (106-158)||(7996387-7996439)
chr3 (106-158)||(10642895-10642947)
chr3 (106-158)||(20065871-20065923)
chr3 (106-158)||(28021103-28021155)
[»] scaffold0336 (1 HSPs)
scaffold0336 (106-176)||(8096-8166)
[»] scaffold2173 (2 HSPs)
scaffold2173 (163-195)||(1-33)
scaffold2173 (252-300)||(87-135)
[»] scaffold0089 (1 HSPs)
scaffold0089 (49-188)||(29570-29709)
[»] scaffold0496 (1 HSPs)
scaffold0496 (106-159)||(72-125)
[»] scaffold0350 (1 HSPs)
scaffold0350 (106-159)||(7578-7631)
[»] scaffold0159 (2 HSPs)
scaffold0159 (106-159)||(9405-9458)
scaffold0159 (106-159)||(19879-19932)
[»] scaffold0038 (1 HSPs)
scaffold0038 (106-158)||(7801-7853)


Alignment Details
Target: chr6 (Bit Score: 135; Significance: 2e-70; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 27273023 - 27272829
Alignment:
Q  1 aagaaggaaacagaggttggaatggtatcctctagagcaagtcagtctatggctactgtcgcccctgttaatgctgctcagctacctccaccatactcct 100  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  27273023 aagaaggaaacagaggttggaatggtatcctctggagcaggtcagactacagctactgtcgcccctgttaatgctgctcagctacctccaccatactcct 27272924  T
Q  101 acgcaccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccacctcaggtacccgtgaatgctattgtg 195  Q
    | | |||||| ||||||||||| |||| ||||||||||||| || ||||||||||||| |||||||||||||| ||||| |||||||||||||||    
T  27272923 atgtaccgtattctcaacatccattctacccgccattttactattagtatcctttgccatcaggaccacctcaagtacctgtgaatgctattgtg 27272829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 27630149 - 27629955
Alignment:
Q  1 aagaaggaaacagaggttggaatggtatcctctagagcaagtcagtctatggctactgtcgcccctgttaatgctgctcagctacctccaccatactcct 100  Q
    ||||||||||||||||||||||||||||||||  ||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||    
T  27630149 aagaaggaaacagaggttggaatggtatcctcgggagcaggtcagtctacggctactgtcgcccctgttaatgttgctcagctacctccaccatacccct 27630050  T
Q  101 acgcaccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccacctcaggtacccgtgaatgctattgtg 195  Q
       |||| || ||||| ||||| |||||||| || ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  27630049 gtacaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtg 27629955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 49 - 193
Target Start/End: Original strand, 20160508 - 20160652
Alignment:
Q  49 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagt 148  Q
    ||||||||||| ||||||||||||||| ||||  ||||||||||||||   |  ||||  |||||||||||||| ||||  || ||||||||||||||||    
T  20160508 atggctactgttgcccctgttaatgctactcaattacctccaccatacctgtttgcacattactctcaacatcctttctatccaccattttaccatcagt 20160607  T
Q  149 atcctttgccgtcaggaccacctcaggtacccgtgaatgctattg 193  Q
    ||||| | ||  | || | ||||||||||||||| ||||| ||||    
T  20160608 atcctctaccaccgggtcaacctcaggtacccgttaatgccattg 20160652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 49 - 193
Target Start/End: Complemental strand, 22172323 - 22172179
Alignment:
Q  49 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagt 148  Q
    ||||||||||| ||||||||||||||| ||||  ||||||||||||||   |  ||||  |||||||||||||| ||||  || ||||||||||||||||    
T  22172323 atggctactgttgcccctgttaatgctactcaattacctccaccatacctgtttgcacattactctcaacatcctttctatccaccattttaccatcagt 22172224  T
Q  149 atcctttgccgtcaggaccacctcaggtacccgtgaatgctattg 193  Q
    ||||| | ||  | || | ||||||||||||||| ||||| ||||    
T  22172223 atcctctaccaccgggtcaacctcaggtacccgttaatgccattg 22172179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 70 - 188
Target Start/End: Original strand, 28162485 - 28162603
Alignment:
Q  70 aatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccac 169  Q
    ||||||||||||||||||||| | ||| | || || |  |||||||| ||||| ||||| || ||||| || ||||||||||||||||| || |||| ||    
T  28162485 aatgctgctcagctacctccatcgtacccgtatgcgcaatactctcagcatcctttctttccaccattctatcatcagtatcctttgccatcgggacaac 28162584  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  28162585 ctcaggtacccgttaatgc 28162603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 13522441 - 13522323
Alignment:
Q  70 aatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccac 169  Q
    ||||||||||||||||||||  | ||| | || || |  |||||||| ||||| ||||| || ||||| || ||||||||||||||||| || || | ||    
T  13522441 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 13522342  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  13522341 ctcaggtacccgttaatgc 13522323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 33374624 - 33374506
Alignment:
Q  70 aatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccac 169  Q
    ||||||||||||||||||||  | ||| | || || |  |||||||| ||||| ||||| || ||||| || ||||||||||||||||| || || | ||    
T  33374624 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 33374525  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  33374524 ctcaggtacccgttaatgc 33374506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 193
Target Start/End: Complemental strand, 22935212 - 22935125
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccacctcaggtacccgtgaatgctattg 193  Q
    ||||| ||||||||||| ||||| |||||||| || ||||||||||| |||||  | || | ||||||||||||||| ||||| ||||    
T  22935212 ccgtattctcaacatcccttctttccgccattctatcatcagtatcccttgccaccgggtcaacctcaggtacccgtcaatgcaattg 22935125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 193
Target Start/End: Complemental strand, 23857657 - 23857570
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccacctcaggtacccgtgaatgctattg 193  Q
    ||||| ||||||||||| ||||| |||||||| || ||||||||||| |||||  | || | ||||||||||||||| ||||| ||||    
T  23857657 ccgtattctcaacatcccttctttccgccattctatcatcagtatcccttgccaccgggtcaacctcaggtacccgtcaatgcaattg 23857570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 4525150 - 4525220
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccacctcaggt 176  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||||||||||||  |||| | |||||||||    
T  4525150 ccgtattctcagcatccgttcttcccaccgttttatcatcagtatcctttgccaccaggccaacctcaggt 4525220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 8892678 - 8892560
Alignment:
Q  70 aatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccac 169  Q
    ||||||||||||||||||||  | ||| | || || |  |||||||| ||||| ||||| || ||||| || ||||||||| ||||||| || || | ||    
T  8892678 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattatatcatcagtattctttgccatcgggtcaac 8892579  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  8892578 ctcaggtacccgttaatgc 8892560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 193
Target Start/End: Complemental strand, 22477606 - 22477521
Alignment:
Q  108 gtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccacctcaggtacccgtgaatgctattg 193  Q
    ||||||||| ||||| ||||| || ||||| || ||| ||||||||||||| || || | ||||||||||||||| ||||| ||||    
T  22477606 gtactctcagcatcccttctttccaccattctatcattagtatcctttgccatcgggtcaacctcaggtacccgttaatgcaattg 22477521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 4757622 - 4757674
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| |||||||||||||||||||| || ||||| |||||||| ||||||||    
T  4757622 ccgtattctcaacatccgttcttcccaccgttttatcatcagtaccctttgcc 4757674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 4772858 - 4772910
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| |||||||||||||||||||| || ||||| |||||||| ||||||||    
T  4772858 ccgtattctcaacatccgttcttcccaccgttttatcatcagtaccctttgcc 4772910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 27360345 - 27360293
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| |||||||||||||||||||| || ||||| |||||||| ||||||||    
T  27360345 ccgtattctcaacatccgttcttcccaccgttttatcatcagtaccctttgcc 27360293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 27450688 - 27450636
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| |||||||||||||||||||| || ||||| |||||||| ||||||||    
T  27450688 ccgtattctcaacatccgttcttcccaccgttttatcatcagtaccctttgcc 27450636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 300
Target Start/End: Complemental strand, 27629901 - 27629853
Alignment:
Q  252 gcatcttgctaggcctacttttcctctaatcccggttttgtatgctgat 300  Q
    |||| ||||||||||||||||||||| ||||||| | ||||||||||||    
T  27629901 gcattttgctaggcctacttttcctccaatcccgatgttgtatgctgat 27629853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 29549339 - 29549391
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||||||||| |||||||||||||| || ||||| |||||||| ||||||||    
T  29549339 ccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 29549391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 149
Target Start/End: Original strand, 16673988 - 16674031
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagta 149  Q
    ||||||||||| |||||||||||||| || ||||||||||||||    
T  16673988 ccgtactctcagcatccgttcttcccaccgttttaccatcagta 16674031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 16944362 - 16944309
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccg 159  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| |||||||||    
T  16944362 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccg 16944309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 27484978 - 27485031
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccg 159  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| |||||||||    
T  27484978 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccg 27485031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 29572874 - 29572927
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccg 159  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| |||||||||    
T  29572874 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccg 29572927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 4546119 - 4546067
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| ||||||||    
T  4546119 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 4546067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 4724478 - 4724426
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| ||||||||    
T  4724478 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 4724426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 17025123 - 17025175
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| ||||||||    
T  17025123 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 17025175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 27044251 - 27044303
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| ||||||||    
T  27044251 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 27044303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 28207303 - 28207355
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| ||||||||    
T  28207303 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 28207355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 5e-19; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 52 - 180
Target Start/End: Complemental strand, 16450327 - 16450199
Alignment:
Q  52 gctactgtcgcccctgttaatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagtatc 151  Q
    |||||||| |||||| |||||||||| ||| |||||||  | ||| | ||||| | ||||||||| ||||| ||||| || |||||||| ||||||||||    
T  16450327 gctactgttgcccctattaatgctgcccagttacctccgtcgtacccgtacgcgcagtactctcagcatcccttctttccaccattttatcatcagtatc 16450228  T
Q  152 ctttgccgtcaggaccacctcaggtaccc 180  Q
    ||||||| || || | |||||||||||||    
T  16450227 ctttgccatcgggtcaacctcaggtaccc 16450199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 49 - 182
Target Start/End: Original strand, 16041134 - 16041267
Alignment:
Q  49 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagt 148  Q
    ||||||||||| |||||| |||||||||| ||| |||||||  | ||| | || || || |||||||| ||||| ||||| || ||||| || |||||||    
T  16041134 atggctactgttgcccctattaatgctgcccagttacctccgtcgtacccatatgcgccatactctcagcatcccttctttccaccattctatcatcagt 16041233  T
Q  149 atcctttgccgtcaggaccacctcaggtacccgt 182  Q
    |||||||| | || || | |||||||||||||||    
T  16041234 atcctttgtcatcgggtcaacctcaggtacccgt 16041267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 193
Target Start/End: Complemental strand, 16503715 - 16503571
Alignment:
Q  49 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagt 148  Q
    ||||||||||| || ||| |||||||||| ||  | |||||  ||||| | || || ||||||||||| ||||| ||||| |||||||| || |||||||    
T  16503715 atggctactgttgctcctattaatgctgcccaaatgcctccgtcatacccatatgcgccgtactctcagcatcctttctttccgccattctatcatcagt 16503616  T
Q  149 atcctttgccgtcaggaccacctcaggtacccgtgaatgctattg 193  Q
    |||| |||||  | || | ||||||||||||||| ||||| ||||    
T  16503615 atcccttgccaccgggtcaacctcaggtacccgttaatgcaattg 16503571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 193
Target Start/End: Complemental strand, 16518751 - 16518607
Alignment:
Q  49 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagt 148  Q
    ||||||||||| || ||| |||||||||| ||  | |||||  ||||| | || || ||||||||||| ||||| ||||| |||||||| || |||||||    
T  16518751 atggctactgttgctcctattaatgctgcccaaatgcctccgtcatacccatatgcgccgtactctcagcatcctttctttccgccattctatcatcagt 16518652  T
Q  149 atcctttgccgtcaggaccacctcaggtacccgtgaatgctattg 193  Q
    |||| |||||  | || | ||||||||||||||| ||||| ||||    
T  16518651 atcccttgccaccgggtcaacctcaggtacccgttaatgcaattg 16518607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 31088775 - 31088657
Alignment:
Q  70 aatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccac 169  Q
    ||||||||||||||||||||  | ||| | || || |  |||||||| ||||| ||||| || ||||| || ||||||||||||||||| || || | ||    
T  31088775 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 31088676  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  31088675 ctcaggtacccgttaatgc 31088657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 188
Target Start/End: Original strand, 45733292 - 45733410
Alignment:
Q  70 aatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccac 169  Q
    ||||||||||||||||||||  | ||| | || || |  |||||||| ||||| ||||| || ||||| || ||||||||||||||||| || || | ||    
T  45733292 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 45733391  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  45733392 ctcaggtacccgttaatgc 45733410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 158
Target Start/End: Original strand, 5159330 - 5159439
Alignment:
Q  49 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagt 148  Q
    ||||||||||| || ||| | |||||||||||| | || ||  | ||| | || |||||||||||||| |||||||||||||| || ||||| |||||||    
T  5159330 atggctactgttgctcctatcaatgctgctcagtttcccccgtcctacccttatgcaccgtactctcagcatccgttcttcccaccgttttatcatcagt 5159429  T
Q  149 atcctttgcc 158  Q
    | ||||||||    
T  5159430 accctttgcc 5159439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 31564677 - 31564625
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| |||||||||||||||||||| || ||||| |||||||| ||||||||    
T  31564677 ccgtattctcaacatccgttcttcccaccgttttatcatcagtaccctttgcc 31564625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 149
Target Start/End: Original strand, 3445159 - 3445202
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagta 149  Q
    ||||||||||| |||||||||||||| || ||||||||||||||    
T  3445159 ccgtactctcagcatccgttcttcccaccgttttaccatcagta 3445202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 193
Target Start/End: Original strand, 5127857 - 5127944
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccacctcaggtacccgtgaatgctattg 193  Q
    ||||| ||||| ||||| ||||| ||||||||||| |||||||||||| ||||  | || | |||||| |||||||| ||||| ||||    
T  5127857 ccgtattctcagcatcctttctttccgccattttatcatcagtatcctctgccaccgggtcaacctcaagtacccgttaatgcaattg 5127944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 193
Target Start/End: Complemental strand, 5147618 - 5147531
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccacctcaggtacccgtgaatgctattg 193  Q
    ||||||||||| |||||||||||||| || ||||| |||||||| ||| ||||  | || | |||||| |||||||| ||||| ||||    
T  5147618 ccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtcaatgcaattg 5147531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 193
Target Start/End: Original strand, 26435122 - 26435209
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccacctcaggtacccgtgaatgctattg 193  Q
    ||||||||||| |||||||||||||| || ||||| |||||||| ||| ||||  | || | |||||| |||||||| ||||| ||||    
T  26435122 ccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtcaatgcaattg 26435209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 149
Target Start/End: Complemental strand, 26486022 - 26485979
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagta 149  Q
    ||||||||||| |||||||||||||| || ||||||||||||||    
T  26486022 ccgtactctcagcatccgttcttcccaccgttttaccatcagta 26485979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 149
Target Start/End: Complemental strand, 26538151 - 26538108
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagta 149  Q
    ||||||||||| |||||||||||||| || ||||||||||||||    
T  26538151 ccgtactctcagcatccgttcttcccaccgttttaccatcagta 26538108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 188
Target Start/End: Complemental strand, 11425054 - 11424972
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccacctcaggtacccgtgaatgc 188  Q
    ||||| ||||| ||||| ||||| |||||||||||||||||||| ||| ||||  | || | |||||| |||||||| |||||    
T  11425054 ccgtattctcagcatcctttctttccgccattttaccatcagtaccctctgccaccgggtcaacctcaagtacccgttaatgc 11424972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 9618516 - 9618569
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccg 159  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| |||||||||    
T  9618516 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccg 9618569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 24592819 - 24592766
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccg 159  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| |||||||||    
T  24592819 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccg 24592766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 26275372 - 26275319
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccg 159  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| |||||||||    
T  26275372 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccg 26275319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 26320147 - 26320094
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccg 159  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| |||||||||    
T  26320147 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccg 26320094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 26670192 - 26670139
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccg 159  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| |||||||||    
T  26670192 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccg 26670139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 4145401 - 4145349
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| ||||||||    
T  4145401 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 4145349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 10917143 - 10917091
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| ||||| ||||| ||||| ||||||||||| |||||||||||| ||||    
T  10917143 ccgtattctcagcatcccttctttccgccattttatcatcagtatcctctgcc 10917091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 45387208 - 45387260
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| ||||| ||||| ||||||||||||||||| |||||||| ||| ||||    
T  45387208 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctctgcc 45387260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 188
Target Start/End: Original strand, 1900082 - 1900221
Alignment:
Q  49 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagt 148  Q
    ||||||||||| |||||| |||||||||| ||| |||||||  | ||| | || || || |||||||| ||||| ||||| || ||||| || |||||||    
T  1900082 atggctactgttgcccctattaatgctgcccagttacctccgtcgtacccatatgcgccatactctcagcatcccttctttccaccattctatcatcagt 1900181  T
Q  149 atcctttgccgtcaggaccacctcaggtacccgtgaatgc 188  Q
    |||||||||| || || | ||||||||||||||| |||||    
T  1900182 atcctttgccatcgggtcaacctcaggtacccgttaatgc 1900221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 189
Target Start/End: Original strand, 15227695 - 15227835
Alignment:
Q  49 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagt 148  Q
    ||||||||||| |||||| |||||||||| ||| |||||||  | ||| | || || |  |||||||| ||||| ||||| || ||||| || ||||| |    
T  15227695 atggctactgttgcccctattaatgctgcccagttacctccgtcgtacccgtatgcgcaatactctcagcatcccttctttccaccattctatcatcaat 15227794  T
Q  149 atcctttgccgtcaggaccacctcaggtacccgtgaatgct 189  Q
    |||||||||| || || | ||||||||||||||| ||||||    
T  15227795 atcctttgccatcgggtcaacctcaggtacccgttaatgct 15227835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 158
Target Start/End: Original strand, 24112489 - 24112596
Alignment:
Q  51 ggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagtat 150  Q
    ||||||||| || ||||| |||||||||||| | || ||  | ||| | || |||||||||||||| |||||||||||||| || ||||| ||||||||     
T  24112489 ggctactgttgctcctgtcaatgctgctcagtttcccccgtcctacccttatgcaccgtactctcagcatccgttcttcccaccgttttatcatcagtac 24112588  T
Q  151 cctttgcc 158  Q
    ||||||||    
T  24112589 cctttgcc 24112596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 158
Target Start/End: Complemental strand, 34189404 - 34189297
Alignment:
Q  51 ggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagtat 150  Q
    |||||||||||| ||| | |||||||||||| | || ||  | ||| | || |||||||||||||| |||||||||||||| || ||||| ||||||||     
T  34189404 ggctactgtcgctcctatcaatgctgctcagtttcccccgtcctacccttatgcaccgtactctcagcatccgttcttcccaccgttttatcatcagtac 34189305  T
Q  151 cctttgcc 158  Q
    ||||||||    
T  34189304 cctttgcc 34189297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 149
Target Start/End: Complemental strand, 33674202 - 33674159
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagta 149  Q
    ||||||||||| |||||||||||||| |||||||||||||||||    
T  33674202 ccgtactctcagcatccgttcttcccaccattttaccatcagta 33674159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 24461030 - 24460912
Alignment:
Q  70 aatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccac 169  Q
    ||||||||||||||||||||  | ||| | || || |  |||||||| ||||| ||||| || ||||| || ||||||||| ||||||| || || | ||    
T  24461030 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtattctttgccatcgggtcaac 24460931  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  24460930 ctcaggtacccgttaatgc 24460912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 14763696 - 14763644
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||||||||| |||||||||||||| || ||||| |||||||| ||||||||    
T  14763696 ccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 14763644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 18801014 - 18800962
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| ||||| ||||| ||||||||||||||||| |||||||| ||||||||    
T  18801014 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctttgcc 18800962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 19373140 - 19373192
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||||||||| |||||||||||||| || ||||| |||||||| ||||||||    
T  19373140 ccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 19373192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 36344904 - 36344852
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||||||||| |||||||||||||  || ||||| |||||||||||||||||    
T  36344904 ccgtactctcagcatccgttcttcctaccgttttatcatcagtatcctttgcc 36344852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 193
Target Start/End: Original strand, 5005749 - 5005836
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccacctcaggtacccgtgaatgctattg 193  Q
    ||||| ||||| ||||| ||||||||||||||||| |||||||| ||| ||||  | || | |||||| |||||||| ||||| ||||    
T  5005749 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtcaatgcaattg 5005836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 193
Target Start/End: Original strand, 6569732 - 6569819
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccacctcaggtacccgtgaatgctattg 193  Q
    ||||| ||||| ||||| ||||| |||||||||||||||||||| ||| ||||  | || | |||||| |||||||| ||||| ||||    
T  6569732 ccgtattctcagcatcctttctttccgccattttaccatcagtaccctctgccaccgggtcaacctcaagtacccgttaatgcaattg 6569819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 188
Target Start/End: Original strand, 14664840 - 14664979
Alignment:
Q  49 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagt 148  Q
    ||||||||||| || ||| | |||||||| ||  | |||||  ||||| | || |||||||| ||||| ||||| ||||| ||||||||||| |||||||    
T  14664840 atggctactgttgctcctatcaatgctgcccaaatgcctccgtcatacccatatgcaccgtattctcagcatcctttctttccgccattttatcatcagt 14664939  T
Q  149 atcctttgccgtcaggaccacctcaggtacccgtgaatgc 188  Q
    | ||| ||||  | || | |||||| |||||||| |||||    
T  14664940 accctctgccaccgggtcaacctcaagtacccgttaatgc 14664979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 193
Target Start/End: Original strand, 30753621 - 30753708
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccacctcaggtacccgtgaatgctattg 193  Q
    ||||| ||||| ||||| ||||||||||||||||| |||||||| ||| ||||| | || | |||||| || ||||| ||||| ||||    
T  30753621 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctctgccgccgggtcaacctcaagtgcccgtcaatgcaattg 30753708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 149
Target Start/End: Original strand, 39850502 - 39850545
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagta 149  Q
    ||||||||||| |||||||||||||| || ||||||||||||||    
T  39850502 ccgtactctcagcatccgttcttcccaccgttttaccatcagta 39850545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 40106030 - 40105977
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccg 159  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| |||||||||    
T  40106030 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccg 40105977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 54833269 - 54833318
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatccttt 155  Q
    ||||||||||| |||||||||||||| || ||||| |||||||| |||||    
T  54833269 ccgtactctcagcatccgttcttcccaccgttttatcatcagtacccttt 54833318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 27163709 - 27163657
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| ||||| ||||| ||||||||||||||||| |||||||| ||| ||||    
T  27163709 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctctgcc 27163657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 49 - 188
Target Start/End: Original strand, 20219 - 20358
Alignment:
Q  49 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagt 148  Q
    ||||||||||| |||||| |||||||||| ||| |||||||  | ||| | || || || |||||||| ||||| ||||| ||  |||| || |||||||    
T  20219 atggctactgttgcccctattaatgctgcccagttacctccgtcgtacccatatgcgccatactctcagcatcccttctttccatcattctatcatcagt 20318  T
Q  149 atcctttgccgtcaggaccacctcaggtacccgtgaatgc 188  Q
    |||||||||| || || | ||||||||||||||| |||||    
T  20319 atcctttgccatcgggtcaacctcaggtacccgttaatgc 20358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 5e-16; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 49 - 188
Target Start/End: Original strand, 22888289 - 22888428
Alignment:
Q  49 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagt 148  Q
    ||||||||||| |||||| |||||||||| ||| |||||||  | ||| | || || || |||||||| ||||| ||||| || ||||| || |||||||    
T  22888289 atggctactgttgcccctattaatgctgcccagttacctccgtcgtacccatatgcgccatactctcagcatcccttctttccaccattctatcatcagt 22888388  T
Q  149 atcctttgccgtcaggaccacctcaggtacccgtgaatgc 188  Q
    |||||||||| || || | |||||||||| |||| |||||    
T  22888389 atcctttgccatcgggtcaacctcaggtaaccgttaatgc 22888428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 188
Target Start/End: Original strand, 11325634 - 11325752
Alignment:
Q  70 aatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccac 169  Q
    ||||||||||||||||||||  | ||| | || || |  |||||||| ||||| ||||| || ||||| || ||||||||||||||||| |  |||| ||    
T  11325634 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccattgggacaac 11325733  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  11325734 ctcaggtacccgttaatgc 11325752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 13184970 - 13184852
Alignment:
Q  70 aatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccac 169  Q
    ||||||||||||||||||||  | ||| | || || |  |||||||| ||||| ||||| || ||||| || ||||||||||||||||| || || | ||    
T  13184970 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 13184871  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  13184870 ctcaggtacccgttaatgc 13184852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 13440816 - 13440698
Alignment:
Q  70 aatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccac 169  Q
    ||||||||||||||||||||  | ||| | || || |  |||||||| ||||| ||||| || ||||| || ||||||||||||||||| || || | ||    
T  13440816 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 13440717  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  13440716 ctcaggtacccgttaatgc 13440698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 188
Target Start/End: Original strand, 33877087 - 33877205
Alignment:
Q  70 aatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccac 169  Q
    ||||||||||||||||||||  | ||| | || || |  |||||||| ||||| ||||| || ||||| || ||||||||||||||||| || || | ||    
T  33877087 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 33877186  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  33877187 ctcaggtacccgttaatgc 33877205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 25198800 - 25198977
Alignment:
Q  1 aagaaggaaacagaggttggaatggtatcctctagagcaagtcagtctatggctactgtcgcccctgttaatgctgctcagctacctccaccatactcct 100  Q
    |||||||||||||| || || ||||||||| |  ||||  |||| || ||||||||||| || ||| |||||||| | ||  | |||||  | ||| | |    
T  25198800 aagaaggaaacagaagtagggatggtatccgccggagccggtcaatccatggctactgttgctcctattaatgcttcccaattgcctccgtcgtacccat 25198899  T
Q  101 acgcaccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccacctcaggtac 178  Q
    | || ||||||||||| ||||| ||||| || ||||| || ||||||||||||||||| || || | |||||||||||    
T  25198900 atgcgccgtactctcagcatcctttctttccaccattctatcatcagtatcctttgccatcgggtcaacctcaggtac 25198977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 188
Target Start/End: Original strand, 23892022 - 23892161
Alignment:
Q  49 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagt 148  Q
    ||||||||||| || ||| |||||||||| ||  | |||||  | ||| | || || ||||||||||| ||||| ||||| ||  |||| || |||||||    
T  23892022 atggctactgttgctcctattaatgctgcccaaatgcctccgtcgtacccatatgcgccgtactctcagcatcctttctttccaacattctatcatcagt 23892121  T
Q  149 atcctttgccgtcaggaccacctcaggtacccgtgaatgc 188  Q
    |||||||||| || || | ||||||||||||||| |||||    
T  23892122 atcctttgccatcgggtcaacctcaggtacccgtcaatgc 23892161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 158
Target Start/End: Original strand, 33292398 - 33292453
Alignment:
Q  103 gcaccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    |||||||||||||| |||||||||||||| || ||||| |||||||| ||||||||    
T  33292398 gcaccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 33292453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 3789399 - 3789451
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||||||||| |||||||||||||| || ||||| |||||||| ||||||||    
T  3789399 ccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 3789451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 13325133 - 13325081
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| |||||||||||||||||||| || ||||| |||||||| ||||||||    
T  13325133 ccgtattctcaacatccgttcttcccaccgttttatcatcagtaccctttgcc 13325081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 24681310 - 24681362
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| ||||| ||||| ||||||||||||||||| |||||||| ||||||||    
T  24681310 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctttgcc 24681362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 24723837 - 24723889
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| ||||| ||||| ||||||||||||||||| |||||||| ||||||||    
T  24723837 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctttgcc 24723889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 28649099 - 28649151
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| ||||| ||||| ||||||||||||||||| |||||||| ||||||||    
T  28649099 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctttgcc 28649151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 193
Target Start/End: Original strand, 41674589 - 41674669
Alignment:
Q  113 ctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccacctcaggtacccgtgaatgctattg 193  Q
    |||| ||||| ||||| |||||||||||||||||||| ||| ||||  | || |||||||| |||||||| ||||| ||||    
T  41674589 ctcagcatcctttctttccgccattttaccatcagtaccctctgccaccgggtccacctcaagtacccgtcaatgcaattg 41674669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 193
Target Start/End: Complemental strand, 9548832 - 9548745
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccacctcaggtacccgtgaatgctattg 193  Q
    ||||| ||||| ||||| ||||| |||||||||||||||||||| ||| ||||  | || | |||||| |||||||| ||||| ||||    
T  9548832 ccgtattctcagcatcctttctttccgccattttaccatcagtaccctctgccaccgggtcaacctcaagtacccgtcaatgcaattg 9548745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 193
Target Start/End: Original strand, 24969897 - 24969984
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccacctcaggtacccgtgaatgctattg 193  Q
    ||||| ||||| ||||| ||||| |||||||| || ||||||||||| |||||  | || | ||||||||||||||| ||||| ||||    
T  24969897 ccgtattctcagcatcctttctttccgccattctatcatcagtatcccttgccaccgggtcaacctcaggtacccgttaatgcaattg 24969984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 149
Target Start/End: Complemental strand, 40473841 - 40473798
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagta 149  Q
    ||||||||||| |||||||||||||| || ||||||||||||||    
T  40473841 ccgtactctcagcatccgttcttcccaccgttttaccatcagta 40473798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 188
Target Start/End: Complemental strand, 22999403 - 22999321
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccacctcaggtacccgtgaatgc 188  Q
    ||||| ||||| ||||| ||||| ||||||||||| |||||||| ||| ||||| | || | |||||| |||||||| |||||    
T  22999403 ccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccgccgggtcaacctcaagtacccgttaatgc 22999321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 2510924 - 2510977
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccg 159  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| |||||||||    
T  2510924 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccg 2510977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 5637783 - 5637836
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccg 159  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| |||||||||    
T  5637783 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccg 5637836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 9317324 - 9317377
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccg 159  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| |||||||||    
T  9317324 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccg 9317377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 12132028 - 12132081
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccg 159  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| |||||||||    
T  12132028 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccg 12132081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 15759146 - 15759093
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccg 159  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| |||||||||    
T  15759146 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccg 15759093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 26480265 - 26480318
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccg 159  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| |||||||||    
T  26480265 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccg 26480318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 29967355 - 29967302
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccg 159  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| |||||||||    
T  29967355 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccg 29967302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 30029288 - 30029341
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccg 159  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| |||||||||    
T  30029288 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccg 30029341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 30151891 - 30151944
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccg 159  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| |||||||||    
T  30151891 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccg 30151944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 31826708 - 31826655
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccg 159  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| |||||||||    
T  31826708 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccg 31826655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 37754841 - 37754894
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccg 159  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| |||||||||    
T  37754841 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccg 37754894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 37771288 - 37771235
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccg 159  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| |||||||||    
T  37771288 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccg 37771235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 6874175 - 6874227
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| ||||||||    
T  6874175 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 6874227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 28960087 - 28960035
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| ||||||||    
T  28960087 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 28960035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 32599758 - 32599706
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| ||||||||    
T  32599758 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 32599706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 34616394 - 34616446
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| ||||||||    
T  34616394 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 34616446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 37358944 - 37358892
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| ||||||||    
T  37358944 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 37358892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 37671781 - 37671729
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| ||||||||    
T  37671781 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 37671729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 5e-16; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 49 - 188
Target Start/End: Complemental strand, 21703599 - 21703460
Alignment:
Q  49 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagt 148  Q
    ||||||||||| |||||| ||||||||||  || |||||||  | ||| | || || || |||||||| ||||| ||||| || ||||| || |||||||    
T  21703599 atggctactgttgcccctattaatgctgcctagttacctccgtcgtacccatatgcgccatactctcagcatcccttctttccaccattctatcatcagt 21703500  T
Q  149 atcctttgccgtcaggaccacctcaggtacccgtgaatgc 188  Q
    |||||||||| || || | ||||||||||||||| |||||    
T  21703499 atcctttgccatcgggtcaacctcaggtacccgttaatgc 21703460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 31891742 - 31891624
Alignment:
Q  70 aatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccac 169  Q
    ||||||||||||||||||||  | ||| | || || |  |||||||| ||||| ||||| || ||||| || ||||||||||||||||| || |||| ||    
T  31891742 aatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagcatcctttctttccaccattctatcatcagtatcctttgccatcgggacaac 31891643  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  31891642 ctcaggtacccgttaatgc 31891624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 188
Target Start/End: Original strand, 3784481 - 3784599
Alignment:
Q  70 aatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccac 169  Q
    ||||||||||||||||||||  | ||| | || || |  |||||||| ||||| ||||| || ||||| || ||||||||||||||||| || || | ||    
T  3784481 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 3784580  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  3784581 ctcaggtacccgttaatgc 3784599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 188
Target Start/End: Original strand, 34156838 - 34156956
Alignment:
Q  70 aatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccac 169  Q
    ||||||||||||||||||||  | ||| | || || |  |||||||| ||||| ||||| || ||||| || ||||||||||||||||| || || | ||    
T  34156838 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 34156937  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  34156938 ctcaggtacccgttaatgc 34156956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 187
Target Start/End: Complemental strand, 34303717 - 34303600
Alignment:
Q  70 aatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccac 169  Q
    ||||||||||||||||||||  | ||| | || || |  |||||||| ||||| ||||| || ||||| || ||||||||||||||||| || || | ||    
T  34303717 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 34303618  T
Q  170 ctcaggtacccgtgaatg 187  Q
    ||||||||||||| ||||    
T  34303617 ctcaggtacccgttaatg 34303600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 37375021 - 37375073
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||||||||| ||||||||||||||||| ||||| |||||||| ||||||||    
T  37375021 ccgtactctcagcatccgttcttcccgccgttttatcatcagtaccctttgcc 37375073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 109 - 188
Target Start/End: Original strand, 27118554 - 27118633
Alignment:
Q  109 tactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccacctcaggtacccgtgaatgc 188  Q
    |||||||| ||||| ||||| || ||||| || ||||||||||||||||| || || | ||||||||||||||| |||||    
T  27118554 tactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaacctcaggtacccgttaatgc 27118633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 188
Target Start/End: Original strand, 16163426 - 16163544
Alignment:
Q  70 aatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccac 169  Q
    ||||||||||||||||||||  | ||| | || || |  |||||||| ||||| ||||| || ||||| || ||||||||| ||||||| || || | ||    
T  16163426 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtattctttgccatcgggtcaac 16163525  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  16163526 ctcaggtacccgttaatgc 16163544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 12716986 - 12716934
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| ||||| ||||| ||||||||||||||||| |||||||| ||||||||    
T  12716986 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctttgcc 12716934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 193
Target Start/End: Complemental strand, 11635570 - 11635483
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccacctcaggtacccgtgaatgctattg 193  Q
    ||||| ||||| ||||| ||||||||||||||||| |||||||| ||| ||||  | || | |||||| |||||||| ||||| ||||    
T  11635570 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtcaatgcaattg 11635483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 193
Target Start/End: Complemental strand, 11641759 - 11641672
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccacctcaggtacccgtgaatgctattg 193  Q
    ||||| ||||| ||||| ||||||||||||||||| |||||||| ||| ||||  | || | |||||| |||||||| ||||| ||||    
T  11641759 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtcaatgcaattg 11641672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 149
Target Start/End: Complemental strand, 39052209 - 39052166
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagta 149  Q
    ||||||||||| |||||||||||||| || ||||||||||||||    
T  39052209 ccgtactctcagcatccgttcttcccaccgttttaccatcagta 39052166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 149
Target Start/End: Original strand, 40233359 - 40233402
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagta 149  Q
    ||||||||||| |||||||||||||| || ||||||||||||||    
T  40233359 ccgtactctcagcatccgttcttcccaccgttttaccatcagta 40233402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 19416880 - 19416827
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccg 159  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| |||||||||    
T  19416880 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccg 19416827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 22926409 - 22926356
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccg 159  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| |||||||||    
T  22926409 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccg 22926356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 31876141 - 31876194
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccg 159  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| |||||||||    
T  31876141 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccg 31876194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 34861540 - 34861593
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccg 159  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| |||||||||    
T  34861540 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccg 34861593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 37686290 - 37686237
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccg 159  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| |||||||||    
T  37686290 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccg 37686237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 37701555 - 37701502
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccg 159  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| |||||||||    
T  37701555 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccg 37701502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 13936925 - 13936873
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| ||||| ||||| ||||| |||||||||||||||||||| ||| ||||    
T  13936925 ccgtattctcagcatcctttctttccgccattttaccatcagtaccctctgcc 13936873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 32049658 - 32049710
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| ||||| ||||| ||||||||||||||||| |||||||| ||| ||||    
T  32049658 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctctgcc 32049710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 34279309 - 34279361
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| ||||| ||||| ||||| |||||||||||||||||||| ||| ||||    
T  34279309 ccgtattctcagcatcctttctttccgccattttaccatcagtaccctctgcc 34279361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 37925353 - 37925405
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| ||||||||    
T  37925353 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 37925405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 39889922 - 39889974
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| ||||||||    
T  39889922 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 39889974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 3083 - 2965
Alignment:
Q  70 aatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccac 169  Q
    ||||||||||||||||||||  | ||| | ||||| |  |||||||| ||||| ||||| || ||||| || ||||||||||||||||| || || | ||    
T  3083 aatgctgctcagctacctccgtcgtacccgtacgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 2984  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  2983 ctcaggtacccgtcaatgc 2965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 188
Target Start/End: Original strand, 44562932 - 44563050
Alignment:
Q  70 aatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccac 169  Q
    ||||||||||||||||||||  | ||| | || || |  |||||||| ||||| ||||| || ||||| || ||||||||||||||||| || |||| ||    
T  44562932 aatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagcatcctttctttccaccattctatcatcagtatcctttgccatcgggacaac 44563031  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  44563032 ctcaggtacccgttaatgc 44563050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 188
Target Start/End: Original strand, 9354453 - 9354571
Alignment:
Q  70 aatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccac 169  Q
    ||||||||||||||||||||  | ||| | || || |  |||||||| ||||| ||||| || ||||| || ||||||||||||||||| || || | ||    
T  9354453 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 9354552  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  9354553 ctcaggtacccgttaatgc 9354571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 19659423 - 19659305
Alignment:
Q  70 aatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccac 169  Q
    ||||||||||||||||||||  | ||| | || || |  |||||||| ||||| ||||| || ||||| || ||||||||||||||||| || || | ||    
T  19659423 aatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 19659324  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  19659323 ctcaggtacccgttaatgc 19659305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 49 - 193
Target Start/End: Original strand, 16283256 - 16283400
Alignment:
Q  49 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagt 148  Q
    ||||||||||| || ||| |||||||||| ||  | |||||  | ||| | || || ||||||||||| ||||| ||||| |||||||| || ||| |||    
T  16283256 atggctactgttgctcctattaatgctgcccaaatgcctccgtcgtacccatatgcgccgtactctcagcatcctttctttccgccattctatcattagt 16283355  T
Q  149 atcctttgccgtcaggaccacctcaggtacccgtgaatgctattg 193  Q
    ||||||||||  |||| | ||||||||||||| | ||||| ||||    
T  16283356 atcctttgccaccaggtcaacctcaggtacccattaatgcaattg 16283400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 188
Target Start/End: Original strand, 18710450 - 18710532
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccacctcaggtacccgtgaatgc 188  Q
    ||||||||||| |||||||||||||| || ||||| |||||||| ||||||||  | || | ||||||||| ||||| |||||    
T  18710450 ccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggttcccgtcaatgc 18710532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 19518494 - 19518442
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| ||||| ||||| ||||||||||||||||| |||||||| ||||||||    
T  19518494 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctttgcc 19518442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 19208711 - 19208658
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccg 159  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| |||||||||    
T  19208711 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccg 19208658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 19286329 - 19286378
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatccttt 155  Q
    ||||||||||| |||||||||||||| || ||||| |||||||| |||||    
T  19286329 ccgtactctcagcatccgttcttcccaccgttttatcatcagtacccttt 19286378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 28362306 - 28362253
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccg 159  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| |||||||||    
T  28362306 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccg 28362253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 33258587 - 33258640
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccg 159  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| |||||||||    
T  33258587 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccg 33258640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 12093084 - 12093032
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| ||||||||    
T  12093084 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 12093032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 29829177 - 29829229
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| ||||||||    
T  29829177 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 29829229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 31354388 - 31354440
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| ||||||||    
T  31354388 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 31354440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 20340760 - 20340642
Alignment:
Q  70 aatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccac 169  Q
    ||||||||||||||||||||  | ||| | ||||| |  |||||||| ||||| ||||| || ||||| || ||||||||||||||||| || || | ||    
T  20340760 aatgctgctcagctacctccgtcgtacccgtacgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 20340661  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  20340660 ctcaggtacccgtcaatgc 20340642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 41793700 - 41793648
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| ||||||||||| ||||||||||||||||| |||||||| ||| ||||    
T  41793700 ccgtattctcaacatcctttcttcccgccattttatcatcagtaccctctgcc 41793648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 188
Target Start/End: Original strand, 20460914 - 20461053
Alignment:
Q  49 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagt 148  Q
    ||||||||| | |||||| |||||||||| ||| ||||||| || ||| | || || |  |||||||| ||||| ||||| || ||||| || ||||| |    
T  20460914 atggctactattgcccctattaatgctgcccagttacctccgccgtacccgtatgcgcaatactctcagcatcctttctttccaccattctatcatcaat 20461013  T
Q  149 atcctttgccgtcaggaccacctcaggtacccgtgaatgc 188  Q
    ||||| | || || || | ||||||||||||||| |||||    
T  20461014 atcctctaccatcgggtcaacctcaggtacccgttaatgc 20461053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 10962533 - 10962586
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccg 159  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| |||||||||    
T  10962533 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccg 10962586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 28584844 - 28584897
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccg 159  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| |||||||||    
T  28584844 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccg 28584897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 51638081 - 51638133
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| ||||||||    
T  51638081 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 51638133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 158
Target Start/End: Original strand, 32438927 - 32439034
Alignment:
Q  51 ggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagtat 150  Q
    ||||||||| || ||||| |||||||||||| | || ||  | ||| | || |||||||||||||| |||||||||||||| || ||||| ||||||||     
T  32438927 ggctactgttgctcctgtcaatgctgctcagtttcccccgtcctacccttatgcaccgtactctcagcatccgttcttcccaccgttttatcatcagtac 32439026  T
Q  151 cctttgcc 158  Q
    ||||||||    
T  32439027 cctttgcc 32439034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 17994250 - 17994132
Alignment:
Q  70 aatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccac 169  Q
    ||||||||||||||||||||  | ||| | || || |  |||||||| ||||| ||||| || ||||| || ||||||||||||||||| || || | ||    
T  17994250 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 17994151  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  17994150 ctcaggtacccgttaatgc 17994132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 187
Target Start/End: Original strand, 4625736 - 4625853
Alignment:
Q  70 aatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccac 169  Q
    ||||||||||||||||||||  | ||| | || || |  |||||||| ||||| ||||| || ||||| || ||||||||||||||||| || || | ||    
T  4625736 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattatatcatcagtatcctttgccatcgggtcaac 4625835  T
Q  170 ctcaggtacccgtgaatg 187  Q
    ||||||||||||| ||||    
T  4625836 ctcaggtacccgttaatg 4625853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 158
Target Start/End: Original strand, 4893035 - 4893090
Alignment:
Q  103 gcaccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    |||||||||||||| |||||||||||||| || ||||| |||||||| ||||||||    
T  4893035 gcaccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 4893090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 158
Target Start/End: Original strand, 8211509 - 8211618
Alignment:
Q  49 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagt 148  Q
    ||||||||||| || ||| | ||||| |||||  | |||||  ||||| | || || ||||||||||| |||||||||||||| || ||||| |||||||    
T  8211509 atggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatgcgccgtactctcagcatccgttcttcccaccgttttatcatcagt 8211608  T
Q  149 atcctttgcc 158  Q
    | ||||||||    
T  8211609 accctttgcc 8211618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 5466810 - 5466862
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| ||||| |||||||||||||| |||||||| |||||||| ||||||||    
T  5466810 ccgtattctcagcatccgttcttcccaccattttatcatcagtaccctttgcc 5466862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 18277485 - 18277433
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||||||||| |||||||||||||| || ||||| |||||||| ||||||||    
T  18277485 ccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 18277433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 18292786 - 18292734
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||||||||| |||||||||||||| || ||||| |||||||| ||||||||    
T  18292786 ccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 18292734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 18308087 - 18308035
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||||||||| |||||||||||||| || ||||| |||||||| ||||||||    
T  18308087 ccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 18308035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 29665418 - 29665366
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||||||||| |||||||||||||| || ||||| |||||||| ||||||||    
T  29665418 ccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 29665366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 188
Target Start/End: Complemental strand, 16626993 - 16626854
Alignment:
Q  49 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagt 148  Q
    ||||||||||| |||||| |||||||||| ||| |||||||  | ||| | || ||||  |||||||| ||||| ||||| || || || || |||||||    
T  16626993 atggctactgttgcccctattaatgctgcccagttacctccgtcgtacccgtatgcacaatactctcagcatcccttctttccaccgttctatcatcagt 16626894  T
Q  149 atcctttgccgtcaggaccacctcaggtacccgtgaatgc 188  Q
    ||||| | || || || | ||||| ||||||||| |||||    
T  16626893 atcctctaccatcgggtcaacctccggtacccgttaatgc 16626854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 149
Target Start/End: Original strand, 21674518 - 21674561
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagta 149  Q
    ||||| ||||| ||||||||||| ||||||||||||||||||||    
T  21674518 ccgtattctcagcatccgttctttccgccattttaccatcagta 21674561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 193
Target Start/End: Complemental strand, 28116390 - 28116303
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccacctcaggtacccgtgaatgctattg 193  Q
    ||||| ||||| ||||| ||||||||||||||||| |||||||| ||| ||||  | || | |||||| |||||||| ||||| ||||    
T  28116390 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtcaatgcaattg 28116303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 149
Target Start/End: Original strand, 48465740 - 48465783
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagta 149  Q
    ||||||||||| |||||||||||||| || ||||||||||||||    
T  48465740 ccgtactctcagcatccgttcttcccaccgttttaccatcagta 48465783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 149
Target Start/End: Original strand, 51781836 - 51781879
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagta 149  Q
    ||||||||||| |||||||||||||| || ||||||||||||||    
T  51781836 ccgtactctcagcatccgttcttcccaccgttttaccatcagta 51781879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 149
Target Start/End: Original strand, 51796925 - 51796968
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagta 149  Q
    ||||||||||| |||||||||||||| || ||||||||||||||    
T  51796925 ccgtactctcagcatccgttcttcccaccgttttaccatcagta 51796968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 5013537 - 5013590
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccg 159  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| |||||||||    
T  5013537 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccg 5013590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 153
Target Start/End: Original strand, 18530156 - 18530269
Alignment:
Q  40 agtcagtctatggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccatttt 139  Q
    ||||| || |||||||||||  ||||| |||||||||| ||| |||||||| | ||| | || || |  |||||||| ||||| ||||| || ||||| |    
T  18530156 agtcaatccatggctactgttacccctattaatgctgcccagttacctccatcgtacccgtatgcgcaatactctcagcatcctttctttccaccattct 18530255  T
Q  140 accatcagtatcct 153  Q
    | ||||||||||||    
T  18530256 atcatcagtatcct 18530269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 158
Target Start/End: Complemental strand, 22388065 - 22387956
Alignment:
Q  49 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagt 148  Q
    ||||||||||| || ||| | |||||||||||| | || ||  | ||| | || ||||| |||||||| ||||||||||||||  | ||||| |||||||    
T  22388065 atggctactgttgctcctatcaatgctgctcagtttcccccgtcctacccttatgcaccatactctcagcatccgttcttcccatcgttttatcatcagt 22387966  T
Q  149 atcctttgcc 158  Q
    | ||||||||    
T  22387965 accctttgcc 22387956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 158
Target Start/End: Complemental strand, 22871372 - 22871255
Alignment:
Q  41 gtcagtctatggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccatttta 140  Q
    |||| |||||||||||||| || ||| | ||||| |||||| | |||||  ||||| | ||    ||||| ||||| |||||||||||||| || |||||    
T  22871372 gtcaatctatggctactgttgcacctatcaatgcagctcagatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccaccgtttta 22871273  T
Q  141 ccatcagtatcctttgcc 158  Q
     |||||||| ||||||||    
T  22871272 tcatcagtaccctttgcc 22871255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 158
Target Start/End: Complemental strand, 22886431 - 22886314
Alignment:
Q  41 gtcagtctatggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccatttta 140  Q
    |||| |||||||||||||| || ||| | ||||| |||||| | |||||  ||||| | ||    ||||| ||||| |||||||||||||| || |||||    
T  22886431 gtcaatctatggctactgttgcacctatcaatgcagctcagatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccaccgtttta 22886332  T
Q  141 ccatcagtatcctttgcc 158  Q
     |||||||| ||||||||    
T  22886331 tcatcagtaccctttgcc 22886314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 24327984 - 24328037
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccg 159  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| |||||||||    
T  24327984 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccg 24328037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 28339127 - 28339180
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccg 159  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| |||||||||    
T  28339127 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccg 28339180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 31964906 - 31964853
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccg 159  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| |||||||||    
T  31964906 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccg 31964853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 50134504 - 50134451
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccg 159  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| |||||||||    
T  50134504 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccg 50134451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 4347117 - 4347065
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| ||||||||    
T  4347117 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 4347065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 159
Target Start/End: Complemental strand, 5609754 - 5609702
Alignment:
Q  107 cgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccg 159  Q
    |||| ||||| |||||||||||||| || ||||| |||||||| |||||||||    
T  5609754 cgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccg 5609702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 6542907 - 6542855
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| ||||||||    
T  6542907 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 6542855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 7073037 - 7073089
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| ||||| ||||| ||||| |||||||||||||||||||| ||| ||||    
T  7073037 ccgtattctcagcatcctttctttccgccattttaccatcagtaccctctgcc 7073089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 7996387 - 7996439
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| ||||| ||||| ||||||||||||||||| |||||||| ||| ||||    
T  7996387 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctctgcc 7996439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 10642895 - 10642947
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| ||||| ||||| ||||||||||||||||| |||||||| ||| ||||    
T  10642895 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctctgcc 10642947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 20065871 - 20065923
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| ||||| ||||| ||||| ||||||||||| |||||||| ||||||||    
T  20065871 ccgtattctcagcatcctttctttccgccattttatcatcagtaccctttgcc 20065923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 28021103 - 28021155
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| ||||||||    
T  28021103 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 28021155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0336 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 8096 - 8166
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccgtcaggaccacctcaggt 176  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||||||||||||  |||| | |||||||||    
T  8096 ccgtattctcagcatccgttcttcccaccgttttatcatcagtatcctttgccaccaggccaacctcaggt 8166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2173 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold2173
Description:

Target: scaffold2173; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 1 - 33
Alignment:
Q  163 ggaccacctcaggtacccgtgaatgctattgtg 195  Q
    |||||||||||||||||||||||||||||||||    
T  1 ggaccacctcaggtacccgtgaatgctattgtg 33  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2173; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 300
Target Start/End: Original strand, 87 - 135
Alignment:
Q  252 gcatcttgctaggcctacttttcctctaatcccggttttgtatgctgat 300  Q
    |||| ||||||||||||||||||||| ||||||| | ||||||||||||    
T  87 gcattttgctaggcctacttttcctccaatcccgatgttgtatgctgat 135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 188
Target Start/End: Original strand, 29570 - 29709
Alignment:
Q  49 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctacgcaccgtactctcaacatccgttcttcccgccattttaccatcagt 148  Q
    ||||||||||| || ||| |||||||||| ||  | |||||| | ||| | || || ||||| ||||| ||||| ||||| |||||||| || |||||||    
T  29570 atggctactgttgctcctattaatgctgcccaaatgcctccatcgtacccgtatgcgccgtattctcagcatcctttctttccgccattctatcatcagt 29669  T
Q  149 atcctttgccgtcaggaccacctcaggtacccgtgaatgc 188  Q
    | ||||||||  | || | |||||| |||||||| |||||    
T  29670 accctttgccaccgggtcaacctcaagtacccgttaatgc 29709  T

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Target: scaffold0496 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0496
Description:

Target: scaffold0496; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 125 - 72
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccg 159  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| |||||||||    
T  125 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccg 72  T

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Target: scaffold0350 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 7631 - 7578
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccg 159  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| |||||||||    
T  7631 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccg 7578  T

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Target: scaffold0159 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 9458 - 9405
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccg 159  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| |||||||||    
T  9458 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccg 9405  T

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Target: scaffold0159; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 19879 - 19932
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgccg 159  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| |||||||||    
T  19879 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccg 19932  T

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Target: scaffold0038 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 7801 - 7853
Alignment:
Q  106 ccgtactctcaacatccgttcttcccgccattttaccatcagtatcctttgcc 158  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||| ||||||||    
T  7801 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 7853  T

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