View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8570_low_6 (Length: 353)
Name: NF8570_low_6
Description: NF8570
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8570_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 17 - 344
Target Start/End: Original strand, 25267302 - 25267638
Alignment:
| Q |
17 |
acaatcctcatccaacagtcaagatttgactgaatggacatatcaacaaaccaaaaaacacattggtggtctagtctgtacagtcgtatttggcctatcg |
116 |
Q |
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| T |
25267302 |
acaatcctcatccaacagtcaagatttgactgaatggacatgtcaacaaaccaaaatacacattggtggtctagtctgtacagtcgtatttggcctatcg |
25267401 |
T |
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| Q |
117 |
gatcaaggtacaattgtaatccaacgattgaaatttgattgatccgacacatctacaaaccaaaaagactagcagtcatccggtcagtgtagccatatct |
216 |
Q |
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|| |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
25267402 |
gaacaaggtacaattgtaatccaacaatcgaaatttgattgatccgacacatctacaaaccaaaaagactagcagtcatccggtcagtgtagccatacct |
25267501 |
T |
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| Q |
217 |
t---------atcaatgtacaattgggatccaatatctgagatttgactaagactggtagactgctacagaggattcaagctgaagtacataaaagtacc |
307 |
Q |
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| T |
25267502 |
tatttattggatcaatgtacaattgggatccaatatctgagatttgactaagactagtggactgctacagaggattcaagctgaagtatataaaagtacc |
25267601 |
T |
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| Q |
308 |
tttccacgataccacggtaatttgtcttgatgtccat |
344 |
Q |
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| T |
25267602 |
tttccacgataccacggtaatttgtcttcatggccat |
25267638 |
T |
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