View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8571_high_6 (Length: 300)

Name: NF8571_high_6
Description: NF8571
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8571_high_6
NF8571_high_6
[»] chr2 (50 HSPs)
chr2 (160-300)||(24699464-24699604)
chr2 (160-300)||(24690113-24690253)
chr2 (159-300)||(18973053-18973194)
chr2 (160-293)||(19884336-19884469)
chr2 (98-159)||(1752593-1752654)
chr2 (159-277)||(40386969-40387087)
chr2 (5-63)||(24851463-24851522)
chr2 (158-277)||(40390169-40390288)
chr2 (5-78)||(28702015-28702089)
chr2 (7-63)||(6574957-6575014)
chr2 (5-63)||(22455750-22455809)
chr2 (5-63)||(25188652-25188711)
chr2 (5-63)||(39038431-39038490)
chr2 (5-78)||(45087788-45087862)
chr2 (5-53)||(6391927-6391975)
chr2 (160-285)||(18981280-18981407)
chr2 (5-53)||(22188898-22188946)
chr2 (5-53)||(23234214-23234262)
chr2 (9-63)||(13964778-13964833)
chr2 (5-63)||(28712497-28712556)
chr2 (5-63)||(40780559-40780618)
chr2 (2-75)||(24575270-24575344)
chr2 (159-272)||(21068257-21068369)
chr2 (5-53)||(21537978-21538026)
chr2 (5-63)||(10010541-10010600)
chr2 (5-63)||(1587825-1587883)
chr2 (10-52)||(20152790-20152832)
chr2 (2-63)||(20569537-20569599)
chr2 (160-200)||(17333892-17333932)
chr2 (5-53)||(22801735-22801783)
chr2 (5-53)||(24778592-24778640)
chr2 (5-53)||(31801676-31801724)
chr2 (2-75)||(22257427-22257501)
chr2 (5-43)||(23185123-23185161)
chr2 (5-43)||(23596386-23596424)
chr2 (5-63)||(28551712-28551770)
chr2 (5-63)||(34322720-34322778)
chr2 (6-75)||(22271333-22271401)
chr2 (9-50)||(22316857-22316898)
chr2 (5-78)||(24724096-24724168)
chr2 (6-74)||(40331028-40331096)
chr2 (7-63)||(41122473-41122528)
chr2 (5-40)||(16494620-16494655)
chr2 (7-42)||(26367200-26367235)
chr2 (5-63)||(38780646-38780705)
chr2 (12-63)||(44839683-44839734)
chr2 (2-63)||(17964091-17964153)
chr2 (5-63)||(31328765-31328823)
chr2 (5-63)||(31335486-31335544)
chr2 (6-39)||(40331388-40331421)
[»] chr4 (42 HSPs)
chr4 (159-300)||(8657547-8657688)
chr4 (5-63)||(17246858-17246917)
chr4 (5-63)||(24628699-24628758)
chr4 (5-63)||(29120616-29120675)
chr4 (5-75)||(6516721-6516791)
chr4 (5-78)||(54679094-54679168)
chr4 (5-68)||(55379555-55379619)
chr4 (5-63)||(14905127-14905186)
chr4 (5-63)||(22676362-22676421)
chr4 (5-63)||(23749774-23749833)
chr4 (5-63)||(56033776-56033835)
chr4 (5-73)||(13576950-13577020)
chr4 (5-53)||(44397468-44397516)
chr4 (5-63)||(3792581-3792640)
chr4 (5-52)||(37436332-37436379)
chr4 (7-63)||(12600003-12600060)
chr4 (5-75)||(14605707-14605779)
chr4 (162-277)||(18483200-18483315)
chr4 (5-63)||(3106218-3106276)
chr4 (5-63)||(16852721-16852779)
chr4 (5-63)||(16939227-16939285)
chr4 (5-53)||(10071763-10071811)
chr4 (235-287)||(22175777-22175829)
chr4 (5-52)||(15134979-15135026)
chr4 (1-63)||(29681315-29681378)
chr4 (5-63)||(17399482-17399540)
chr4 (2-63)||(19611171-19611233)
chr4 (2-63)||(19665615-19665676)
chr4 (5-46)||(22089548-22089589)
chr4 (220-272)||(47522534-47522586)
chr4 (5-52)||(10072150-10072197)
chr4 (5-63)||(19883941-19884000)
chr4 (2-75)||(23120773-23120848)
chr4 (5-43)||(6640959-6640997)
chr4 (10-63)||(37986420-37986474)
chr4 (5-46)||(8686244-8686285)
chr4 (5-54)||(11900364-11900413)
chr4 (7-44)||(41115618-41115655)
chr4 (12-40)||(9752351-9752379)
chr4 (99-151)||(20055880-20055932)
chr4 (12-40)||(38513187-38513215)
chr4 (5-53)||(55731089-55731137)
[»] scaffold1699 (1 HSPs)
scaffold1699 (160-300)||(1290-1430)
[»] chr1 (40 HSPs)
chr1 (160-300)||(51967950-51968090)
chr1 (160-300)||(15473772-15473912)
chr1 (5-63)||(25449357-25449415)
chr1 (5-53)||(1577110-1577158)
chr1 (5-53)||(23037293-23037341)
chr1 (5-63)||(1899597-1899656)
chr1 (5-63)||(2266336-2266395)
chr1 (5-63)||(2833906-2833965)
chr1 (5-63)||(22428108-22428167)
chr1 (98-157)||(12795087-12795146)
chr1 (5-75)||(14294052-14294123)
chr1 (5-63)||(22600956-22601015)
chr1 (5-75)||(30892303-30892374)
chr1 (5-63)||(38281613-38281672)
chr1 (5-63)||(7309041-7309099)
chr1 (7-53)||(29215061-29215107)
chr1 (5-63)||(30571453-30571511)
chr1 (5-63)||(44824523-44824581)
chr1 (5-53)||(22153087-22153135)
chr1 (159-272)||(44910893-44911007)
chr1 (5-50)||(14264198-14264243)
chr1 (160-263)||(28425165-28425269)
chr1 (5-49)||(32786708-32786752)
chr1 (2-76)||(22202526-22202601)
chr1 (2-76)||(22202648-22202723)
chr1 (5-75)||(22465582-22465653)
chr1 (5-63)||(10250244-10250302)
chr1 (5-63)||(48571022-48571080)
chr1 (5-46)||(12625318-12625359)
chr1 (223-272)||(19763292-19763341)
chr1 (235-287)||(2335996-2336048)
chr1 (24-63)||(20959819-20959859)
chr1 (5-40)||(21983873-21983908)
chr1 (12-63)||(46088243-46088294)
chr1 (9-51)||(2267933-2267975)
chr1 (162-272)||(20521314-20521424)
chr1 (5-46)||(17025772-17025813)
chr1 (11-63)||(19214860-19214913)
chr1 (7-52)||(28493092-28493137)
chr1 (5-53)||(36133472-36133520)
[»] scaffold0043 (2 HSPs)
scaffold0043 (162-300)||(33135-33273)
scaffold0043 (5-61)||(79159-79215)
[»] chr6 (49 HSPs)
chr6 (159-300)||(22232502-22232642)
chr6 (160-300)||(3917492-3917632)
chr6 (160-283)||(18909125-18909248)
chr6 (5-63)||(10631387-10631446)
chr6 (5-63)||(13435135-13435194)
chr6 (5-75)||(20731546-20731617)
chr6 (7-78)||(24717659-24717733)
chr6 (5-63)||(16332980-16333038)
chr6 (5-63)||(21617504-21617562)
chr6 (5-63)||(17380813-17380872)
chr6 (5-63)||(21234406-21234465)
chr6 (5-63)||(21624342-21624401)
chr6 (5-63)||(32543513-32543572)
chr6 (5-63)||(19833829-19833887)
chr6 (5-63)||(22077211-22077269)
chr6 (5-63)||(20113473-20113533)
chr6 (5-63)||(14101284-14101343)
chr6 (5-63)||(15532470-15532529)
chr6 (5-75)||(18434748-18434819)
chr6 (5-52)||(19687995-19688042)
chr6 (5-48)||(22801409-22801452)
chr6 (2-63)||(13601417-13601479)
chr6 (160-277)||(14779901-14780019)
chr6 (5-63)||(16876159-16876217)
chr6 (5-52)||(9717088-9717135)
chr6 (1-63)||(15301468-15301531)
chr6 (5-52)||(16528577-16528624)
chr6 (160-259)||(21750621-21750720)
chr6 (5-63)||(7762890-7762947)
chr6 (5-63)||(12422492-12422550)
chr6 (5-50)||(15986626-15986671)
chr6 (5-53)||(18377688-18377736)
chr6 (6-53)||(19085393-19085440)
chr6 (5-63)||(19623237-19623296)
chr6 (5-63)||(17304106-17304163)
chr6 (5-63)||(19469881-19469938)
chr6 (2-63)||(25593321-25593383)
chr6 (5-54)||(3680362-3680411)
chr6 (223-300)||(7245400-7245477)
chr6 (5-50)||(12041125-12041170)
chr6 (13-61)||(19952434-19952483)
chr6 (5-40)||(19066854-19066889)
chr6 (11-78)||(33353093-33353160)
chr6 (5-63)||(12348792-12348850)
chr6 (2-63)||(14732952-14733014)
chr6 (220-272)||(19169166-19169218)
chr6 (12-40)||(26588875-26588903)
chr6 (237-277)||(27616515-27616555)
chr6 (5-45)||(29917307-29917347)
[»] scaffold0301 (1 HSPs)
scaffold0301 (160-300)||(8949-9089)
[»] chr7 (75 HSPs)
chr7 (160-300)||(46461989-46462129)
chr7 (159-300)||(43005563-43005703)
chr7 (160-300)||(44413206-44413346)
chr7 (159-264)||(18157257-18157362)
chr7 (5-75)||(4820724-4820794)
chr7 (5-63)||(4493794-4493853)
chr7 (5-74)||(13034702-13034772)
chr7 (5-53)||(13879404-13879452)
chr7 (5-75)||(2499266-2499337)
chr7 (5-63)||(13473336-13473395)
chr7 (5-63)||(16546186-16546245)
chr7 (5-63)||(16619417-16619476)
chr7 (5-63)||(21691674-21691733)
chr7 (5-63)||(28623202-28623261)
chr7 (5-73)||(9710683-9710753)
chr7 (5-63)||(15705343-15705401)
chr7 (7-63)||(35954762-35954819)
chr7 (224-300)||(7528774-7528850)
chr7 (5-76)||(11792107-11792179)
chr7 (5-53)||(13138774-13138822)
chr7 (5-53)||(14186947-14186995)
chr7 (5-76)||(15467152-15467224)
chr7 (5-53)||(19328859-19328907)
chr7 (5-53)||(21284223-21284271)
chr7 (5-53)||(41843271-41843319)
chr7 (5-48)||(4832173-4832216)
chr7 (5-75)||(13027800-13027871)
chr7 (5-63)||(14424557-14424616)
chr7 (2-63)||(16315383-16315445)
chr7 (12-61)||(16557466-16557516)
chr7 (12-61)||(16608146-16608196)
chr7 (5-53)||(15087813-15087862)
chr7 (8-53)||(48237687-48237732)
chr7 (5-76)||(12367606-12367678)
chr7 (160-211)||(23443600-23443651)
chr7 (2-63)||(2914502-2914564)
chr7 (5-63)||(8182207-8182265)
chr7 (5-78)||(13261524-13261598)
chr7 (2-63)||(13731522-13731584)
chr7 (5-63)||(15574457-15574515)
chr7 (7-63)||(10884021-10884078)
chr7 (159-272)||(11578850-11578962)
chr7 (7-63)||(13302111-13302168)
chr7 (7-52)||(16155591-16155636)
chr7 (5-53)||(16317445-16317493)
chr7 (5-53)||(22580103-22580151)
chr7 (5-63)||(5001711-5001770)
chr7 (1-63)||(9069010-9069073)
chr7 (5-52)||(12175183-12175230)
chr7 (160-199)||(15820471-15820510)
chr7 (5-52)||(29936194-29936241)
chr7 (5-63)||(30025184-30025243)
chr7 (5-52)||(30946255-30946302)
chr7 (12-63)||(33421005-33421056)
chr7 (5-63)||(33604154-33604213)
chr7 (160-198)||(8913485-8913523)
chr7 (2-63)||(13645701-13645763)
chr7 (2-63)||(13681545-13681607)
chr7 (160-272)||(9019352-9019465)
chr7 (5-50)||(23280824-23280869)
chr7 (5-50)||(33692571-33692616)
chr7 (11-63)||(2266418-2266470)
chr7 (256-300)||(18157029-18157073)
chr7 (11-63)||(48063666-48063718)
chr7 (2-53)||(11318656-11318707)
chr7 (12-63)||(14424765-14424816)
chr7 (5-40)||(32265559-32265594)
chr7 (227-277)||(8913406-8913456)
chr7 (5-78)||(13259292-13259366)
chr7 (157-186)||(12583625-12583654)
chr7 (5-46)||(13424766-13424807)
chr7 (1-73)||(24787600-24787672)
chr7 (15-63)||(1292303-1292351)
chr7 (5-53)||(16310804-16310852)
chr7 (12-40)||(48806736-48806764)
[»] chr3 (66 HSPs)
chr3 (159-280)||(35491055-35491176)
chr3 (5-75)||(52283035-52283106)
chr3 (5-78)||(40799127-40799201)
chr3 (160-272)||(17218047-17218159)
chr3 (5-63)||(6089980-6090039)
chr3 (5-63)||(14968621-14968680)
chr3 (5-63)||(29952283-29952342)
chr3 (5-63)||(30001437-30001496)
chr3 (5-63)||(47206915-47206974)
chr3 (11-63)||(5212818-5212870)
chr3 (5-63)||(1241921-1241980)
chr3 (5-63)||(12727082-12727141)
chr3 (5-63)||(14954662-14954721)
chr3 (5-63)||(20628308-20628367)
chr3 (5-52)||(24776358-24776405)
chr3 (5-63)||(49554356-49554415)
chr3 (5-62)||(11222049-11222107)
chr3 (5-62)||(11222801-11222859)
chr3 (5-63)||(21639128-21639186)
chr3 (5-53)||(18122494-18122542)
chr3 (5-76)||(19885924-19885996)
chr3 (5-52)||(22804867-22804914)
chr3 (5-63)||(25399101-25399160)
chr3 (98-157)||(27444804-27444863)
chr3 (164-300)||(37468052-37468190)
chr3 (5-63)||(38178491-38178550)
chr3 (2-63)||(19889782-19889844)
chr3 (5-63)||(46797241-46797299)
chr3 (8-53)||(31302612-31302657)
chr3 (5-53)||(2782749-2782797)
chr3 (5-53)||(2783139-2783187)
chr3 (5-52)||(11189257-11189304)
chr3 (5-52)||(14393841-14393888)
chr3 (5-63)||(29854663-29854721)
chr3 (5-63)||(47406263-47406322)
chr3 (5-52)||(50299502-50299549)
chr3 (5-63)||(52919676-52919735)
chr3 (5-51)||(2560450-2560496)
chr3 (6-63)||(41494254-41494312)
chr3 (7-63)||(13823322-13823379)
chr3 (10-74)||(17667611-17667676)
chr3 (11-63)||(2025345-2025397)
chr3 (160-272)||(14282140-14282252)
chr3 (235-287)||(37470213-37470265)
chr3 (11-63)||(49669338-49669390)
chr3 (5-53)||(53057571-53057619)
chr3 (5-79)||(16031739-16031814)
chr3 (2-63)||(15902447-15902509)
chr3 (2-63)||(49643607-49643669)
chr3 (160-277)||(15619696-15619812)
chr3 (5-53)||(8874971-8875019)
chr3 (220-272)||(14252460-14252512)
chr3 (7-63)||(14310932-14310987)
chr3 (235-287)||(49967428-49967480)
chr3 (5-63)||(17239775-17239834)
chr3 (5-40)||(30055022-30055057)
chr3 (5-52)||(33582483-33582530)
chr3 (160-279)||(44363408-44363522)
chr3 (5-52)||(46350687-46350734)
chr3 (159-277)||(15627043-15627160)
chr3 (158-200)||(16017486-16017528)
chr3 (5-63)||(19250236-19250293)
chr3 (7-75)||(12963934-12964003)
chr3 (5-46)||(20724307-20724348)
chr3 (160-212)||(16014102-16014153)
chr3 (220-272)||(23288075-23288127)
[»] scaffold0119 (1 HSPs)
scaffold0119 (160-300)||(40096-40236)
[»] chr5 (40 HSPs)
chr5 (165-300)||(30249351-30249484)
chr5 (162-277)||(13358439-13358554)
chr5 (5-63)||(7746524-7746583)
chr5 (5-53)||(23880273-23880321)
chr5 (5-63)||(6498564-6498623)
chr5 (5-63)||(33021909-33021968)
chr5 (5-63)||(11993139-11993197)
chr5 (5-74)||(21100578-21100648)
chr5 (5-63)||(26764721-26764779)
chr5 (5-53)||(13546355-13546403)
chr5 (5-53)||(30742200-30742248)
chr5 (4-74)||(9399440-9399511)
chr5 (5-75)||(12353691-12353762)
chr5 (5-63)||(13736934-13736993)
chr5 (5-63)||(21076011-21076070)
chr5 (5-63)||(31117125-31117184)
chr5 (5-63)||(28138849-28138907)
chr5 (5-63)||(30116702-30116760)
chr5 (5-78)||(3246291-3246363)
chr5 (160-277)||(22704486-22704602)
chr5 (11-63)||(9088221-9088273)
chr5 (11-63)||(15516218-15516270)
chr5 (5-63)||(31487458-31487517)
chr5 (215-278)||(38227822-38227885)
chr5 (5-63)||(42242857-42242916)
chr5 (5-62)||(37395418-37395476)
chr5 (5-53)||(33932528-33932576)
chr5 (2-53)||(6513255-6513306)
chr5 (12-63)||(10848022-10848073)
chr5 (5-63)||(22000855-22000914)
chr5 (5-50)||(90261-90306)
chr5 (10-63)||(21199846-21199898)
chr5 (5-63)||(23413804-23413863)
chr5 (5-40)||(35932834-35932869)
chr5 (5-63)||(25097871-25097928)
chr5 (5-63)||(25156963-25157020)
chr5 (157-186)||(15394824-15394853)
chr5 (5-53)||(19546358-19546406)
chr5 (7-63)||(28465177-28465233)
chr5 (12-40)||(35987059-35987087)
[»] scaffold0439 (1 HSPs)
scaffold0439 (5-63)||(7509-7567)
[»] chr8 (45 HSPs)
chr8 (5-78)||(45539331-45539405)
chr8 (2-75)||(36104578-36104651)
chr8 (5-63)||(16206476-16206535)
chr8 (5-74)||(9319806-9319876)
chr8 (164-245)||(13385688-13385768)
chr8 (5-53)||(31445358-31445406)
chr8 (5-63)||(17796662-17796721)
chr8 (5-63)||(30422277-30422336)
chr8 (5-63)||(15336934-15336992)
chr8 (5-63)||(15425999-15426057)
chr8 (5-63)||(15517303-15517361)
chr8 (5-63)||(22673022-22673080)
chr8 (5-53)||(17442694-17442742)
chr8 (5-53)||(23185593-23185641)
chr8 (6-53)||(18121980-18122027)
chr8 (5-63)||(23264474-23264533)
chr8 (2-74)||(17541333-17541406)
chr8 (15-63)||(6407006-6407054)
chr8 (1-53)||(29692568-29692620)
chr8 (5-63)||(19942481-19942539)
chr8 (5-63)||(25163316-25163375)
chr8 (5-63)||(14990935-14990993)
chr8 (2-63)||(17007555-17007617)
chr8 (5-63)||(18152550-18152608)
chr8 (2-63)||(19153269-19153331)
chr8 (2-52)||(20256356-20256406)
chr8 (2-52)||(20256441-20256491)
chr8 (5-46)||(19706774-19706815)
chr8 (5-53)||(35028324-35028372)
chr8 (2-63)||(12758586-12758648)
chr8 (5-63)||(22662317-22662375)
chr8 (17-63)||(40846262-40846308)
chr8 (5-75)||(43644116-43644185)
chr8 (5-50)||(21932135-21932180)
chr8 (160-277)||(28277349-28277466)
chr8 (160-200)||(27808608-27808648)
chr8 (11-63)||(43639000-43639052)
chr8 (5-52)||(15934505-15934552)
chr8 (2-63)||(16682097-16682159)
chr8 (226-272)||(23816631-23816677)
chr8 (160-198)||(24655368-24655406)
chr8 (5-42)||(1744462-1744499)
chr8 (5-38)||(13431465-13431498)
chr8 (220-285)||(20733220-20733284)
chr8 (12-40)||(33561068-33561096)
[»] scaffold0471 (1 HSPs)
scaffold0471 (2-75)||(2694-2767)
[»] scaffold0859 (1 HSPs)
scaffold0859 (5-78)||(2206-2280)
[»] scaffold0028 (1 HSPs)
scaffold0028 (5-63)||(24576-24634)
[»] scaffold0280 (1 HSPs)
scaffold0280 (5-78)||(3483-3556)
[»] scaffold0031 (1 HSPs)
scaffold0031 (160-285)||(33646-33771)
[»] scaffold0290 (2 HSPs)
scaffold0290 (160-272)||(7476-7588)
scaffold0290 (5-53)||(19454-19502)
[»] scaffold0479 (1 HSPs)
scaffold0479 (5-63)||(9218-9277)
[»] scaffold0210 (1 HSPs)
scaffold0210 (5-63)||(873-932)
[»] scaffold0205 (1 HSPs)
scaffold0205 (5-75)||(752-823)
[»] scaffold0163 (1 HSPs)
scaffold0163 (5-63)||(25680-25739)
[»] scaffold0023 (1 HSPs)
scaffold0023 (5-63)||(102807-102866)
[»] scaffold0035 (2 HSPs)
scaffold0035 (5-63)||(110392-110450)
scaffold0035 (7-63)||(20267-20324)
[»] scaffold0004 (3 HSPs)
scaffold0004 (5-63)||(210657-210715)
scaffold0004 (2-63)||(378348-378410)
scaffold0004 (7-63)||(219491-219547)
[»] scaffold0343 (2 HSPs)
scaffold0343 (160-300)||(4567-4707)
scaffold0343 (160-300)||(4775-4915)
[»] scaffold0036 (1 HSPs)
scaffold0036 (5-53)||(111400-111448)
[»] scaffold1359 (1 HSPs)
scaffold1359 (5-63)||(6-65)
[»] scaffold0315 (1 HSPs)
scaffold0315 (9-63)||(7921-7976)
[»] scaffold0115 (1 HSPs)
scaffold0115 (5-63)||(17583-17642)
[»] scaffold0007 (3 HSPs)
scaffold0007 (5-52)||(59902-59949)
scaffold0007 (9-63)||(45921-45975)
scaffold0007 (9-63)||(63592-63646)
[»] scaffold0359 (1 HSPs)
scaffold0359 (5-78)||(6524-6598)
[»] scaffold0275 (1 HSPs)
scaffold0275 (5-63)||(23879-23937)
[»] scaffold0217 (2 HSPs)
scaffold0217 (5-63)||(22956-23014)
scaffold0217 (5-78)||(729-804)
[»] scaffold0161 (2 HSPs)
scaffold0161 (5-63)||(10907-10967)
scaffold0161 (5-63)||(15571-15631)
[»] scaffold0005 (1 HSPs)
scaffold0005 (5-75)||(211599-211671)
[»] scaffold0022 (2 HSPs)
scaffold0022 (178-285)||(148913-149020)
scaffold0022 (5-53)||(158409-158457)
[»] scaffold0251 (1 HSPs)
scaffold0251 (4-50)||(7096-7142)
[»] scaffold0081 (1 HSPs)
scaffold0081 (5-63)||(13246-13303)
[»] scaffold1294 (1 HSPs)
scaffold1294 (5-46)||(2039-2080)
[»] scaffold0555 (1 HSPs)
scaffold0555 (171-276)||(5218-5323)
[»] scaffold0530 (1 HSPs)
scaffold0530 (7-63)||(2816-2873)
[»] scaffold0011 (2 HSPs)
scaffold0011 (6-63)||(66206-66263)
scaffold0011 (6-63)||(145249-145306)
[»] scaffold0009 (1 HSPs)
scaffold0009 (5-50)||(83627-83672)
[»] scaffold0323 (1 HSPs)
scaffold0323 (160-272)||(17673-17784)
[»] scaffold0002 (1 HSPs)
scaffold0002 (160-272)||(362808-362920)
[»] scaffold0567 (1 HSPs)
scaffold0567 (5-63)||(9150-9209)
[»] scaffold0607 (1 HSPs)
scaffold0607 (5-59)||(5389-5443)
[»] scaffold0249 (1 HSPs)
scaffold0249 (5-63)||(18559-18617)
[»] scaffold0247 (1 HSPs)
scaffold0247 (5-63)||(16514-16571)
[»] scaffold0058 (1 HSPs)
scaffold0058 (164-278)||(73275-73389)
[»] scaffold0026 (1 HSPs)
scaffold0026 (2-63)||(7131-7193)
[»] scaffold0025 (1 HSPs)
scaffold0025 (10-63)||(73783-73835)
[»] scaffold0420 (1 HSPs)
scaffold0420 (160-200)||(10899-10939)
[»] scaffold0029 (1 HSPs)
scaffold0029 (235-287)||(38012-38064)
[»] scaffold0352 (1 HSPs)
scaffold0352 (5-40)||(1617-1652)
[»] scaffold0334 (1 HSPs)
scaffold0334 (5-48)||(7163-7206)
[»] scaffold0330 (1 HSPs)
scaffold0330 (25-63)||(491-530)
[»] scaffold0146 (1 HSPs)
scaffold0146 (5-63)||(14366-14425)
[»] scaffold0056 (1 HSPs)
scaffold0056 (5-40)||(35543-35578)
[»] scaffold0045 (1 HSPs)
scaffold0045 (5-40)||(88398-88433)
[»] scaffold0598 (1 HSPs)
scaffold0598 (5-63)||(2586-2643)
[»] scaffold0138 (1 HSPs)
scaffold0138 (10-63)||(16238-16292)
[»] scaffold0084 (1 HSPs)
scaffold0084 (2-75)||(48556-48630)
[»] scaffold0064 (1 HSPs)
scaffold0064 (5-63)||(44665-44722)
[»] scaffold0337 (1 HSPs)
scaffold0337 (2-74)||(14208-14281)
[»] scaffold0065 (1 HSPs)
scaffold0065 (2-74)||(1250-1323)
[»] scaffold0582 (1 HSPs)
scaffold0582 (237-277)||(318-358)
[»] scaffold0132 (1 HSPs)
scaffold0132 (158-186)||(24299-24327)
[»] scaffold0050 (1 HSPs)
scaffold0050 (220-272)||(41218-41270)
[»] scaffold0032 (1 HSPs)
scaffold0032 (220-272)||(29066-29118)


Alignment Details
Target: chr2 (Bit Score: 117; Significance: 1e-59; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 160 - 300
Target Start/End: Original strand, 24699464 - 24699604
Alignment:
Q  160 tgtcataccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaattt 259  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||| ||||    
T  24699464 tgtcataccccaatttttgacctaagaacctacattcatacaccctctaacccataatattctcttgcttttcagagaaaaattcggcagaaaggtattt 24699563  T
Q  260 taaaatatctcatctttgtaccgattcccacccttcttctc 300  Q
    ||||||| |||||||||||||||||||| ||||||||||||    
T  24699564 taaaatacctcatctttgtaccgattccgacccttcttctc 24699604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 160 - 300
Target Start/End: Original strand, 24690113 - 24690253
Alignment:
Q  160 tgtcataccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaattt 259  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||| ||||| ||||    
T  24690113 tgtcataccccaatttttgacctaagaacctacattcatacaccctctaacccataatattctcttgcttttcagagaaaaattcggcaaaaaggtattt 24690212  T
Q  260 taaaatatctcatctttgtaccgattcccacccttcttctc 300  Q
    ||||||| |||||||||||||||||||| ||||||||||||    
T  24690213 taaaatacctcatctttgtaccgattccgacccttcttctc 24690253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 159 - 300
Target Start/End: Complemental strand, 18973194 - 18973053
Alignment:
Q  159 ctgtcataccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaatt 258  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||| |||    
T  18973194 ctgtcataccccaatttttgaccaaagaatctacattcatacaccatctgacccataatattcttagacttttcagagaaaaattcggcagaaaggtatt 18973095  T
Q  259 ttaaaatatctcatctttgtaccgattcccacccttcttctc 300  Q
    |||||||| |||||||||||||||||||  ||| ||||||||    
T  18973094 ttaaaatacctcatctttgtaccgattctgacctttcttctc 18973053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 160 - 293
Target Start/End: Complemental strand, 19884469 - 19884336
Alignment:
Q  160 tgtcataccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaattt 259  Q
    ||||| ||| ||||||||||||||| ||| |||||||||||||||| ||| ||| ||||||||||||||||||| | ||||| ||| |||||||| ||||    
T  19884469 tgtcaaacctcaatttttgacctaaaaacttacattcatacaccctatgatccaaaatattctctgacttttcaaaaaaaaaatcgacagaaaggtattt 19884370  T
Q  260 taaaatatctcatctttgtaccgattcccaccct 293  Q
    ||||||| |||||||||||||||||||| |||||    
T  19884369 taaaatacctcatctttgtaccgattccgaccct 19884336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 1752593 - 1752654
Alignment:
Q  98 ccttccttggtgaaataagcttcgatgcggctgtaccatgctcgtggtgcttgtttaaggcc 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1752593 ccttccttggtgaaataagcttcgatgcggctgtaccatgctcgtggtgcttgtttaaggcc 1752654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 277
Target Start/End: Complemental strand, 40387087 - 40386969
Alignment:
Q  159 ctgtcataccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaatt 258  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||||||||| |   |||||| || |||||||||||||||||||||| ||| ||  | |    
T  40387087 ctgtcataccccaattttttacctaagaccctacatttatacaccctctgatctggaatattatccgacttttcagagaaaaattcggtagagagatact 40386988  T
Q  259 ttaaaatatctcatctttg 277  Q
    |||||||| ||||| ||||    
T  40386987 ttaaaatacctcatttttg 40386969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 24851463 - 24851522
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24851463 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaa 24851522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 158 - 277
Target Start/End: Complemental strand, 40390288 - 40390169
Alignment:
Q  158 cctgtcataccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaat 257  Q
    |||||||| ||||||||||| || ||||| |||| ||||||||| ||||||| ||| |||||| |||||||||| ||| |||||||||||||| ||  |     
T  40390288 cctgtcattccccaattttttacgtaagatcctatattcatacatcctctgatccaaaatattatctgactttttagataaaaattcggcagagagatac 40390189  T
Q  258 tttaaaatatctcatctttg 277  Q
    ||||||||| ||||| ||||    
T  40390188 tttaaaatacctcatttttg 40390169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 28702015 - 28702089
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaagaaa 78  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||  ||| |||||||||    
T  28702015 acatcacttcagaagtagaactctatttgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagaaa 28702089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 6574957 - 6575014
Alignment:
Q  7 atcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  6574957 atcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaa 6575014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 22455750 - 22455809
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  22455750 acatcacttcagaagtagaactctatctgcttctgatcagtgttttgagcttaggagaaa 22455809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 25188711 - 25188652
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  25188711 acatcacttcagaagtggaactctatctgcttctgatcagtgttttcagcttaggagaaa 25188652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 39038431 - 39038490
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  39038431 acatcacttcagaagtataactctatctgcttctgatcagtgttttcagcttaggagaaa 39038490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 45087788 - 45087862
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaagaaa 78  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||  ||| |||||||||    
T  45087788 acatcacttcagaagtataaatctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagaaa 45087862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 6391975 - 6391927
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  6391975 acatcacttcagaagtagaactctatatgcttctgatcagtgttttcag 6391927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 285
Target Start/End: Complemental strand, 18981407 - 18981280
Alignment:
Q  160 tgtcataccccaatttttgacct--aagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaat 257  Q
    ||||||||| |||||||||||||  |||| ||||||||||||| || | |||| |  |||||||| ||| ||||||||||||||||| | ||||||  ||    
T  18981407 tgtcatacctcaatttttgacctctaagatcctacattcatacgccttttgacactgaatattctttgatttttcagagaaaaattcagtagaaagttat 18981308  T
Q  258 tttaaaatatctcatctttgtaccgatt 285  Q
    ||||||||| ||||| ||| | ||||||    
T  18981307 tttaaaatacctcatttttattccgatt 18981280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 22188898 - 22188946
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22188898 acatcacttcagaagtagaactatatctgcttctgatcagtgttttcag 22188946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 23234262 - 23234214
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23234262 acatcacttcagaagtaaaactctatctgcttctgatcagtgttttcag 23234214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 13964778 - 13964833
Alignment:
Q  9 cacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  13964778 cacttcagaagtagaactttatctgcttctgatcagtgttttcagcttaggagaaa 13964833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 28712497 - 28712556
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||    
T  28712497 acatcacttcagaagtataactctatctgcttctgatcaatgttttcagcttaggagaaa 28712556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 40780618 - 40780559
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||    
T  40780618 acatcacttcagaagcagaactctatttgcttctgatcagtgttttcagcttaggagaaa 40780559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 24575344 - 24575270
Alignment:
Q  2 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaag 75  Q
    |||| ||||||||||||| | |||||||| |||||||||||||||||||||| |||||||||| |||| ||||||    
T  24575344 tggaaatcacttcagaagcaaaactctatttgcttctgatcagtgttttcagcttaggagaaaatgaagaaaaag 24575270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 159 - 272
Target Start/End: Original strand, 21068257 - 21068369
Alignment:
Q  159 ctgtcataccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaatt 258  Q
    |||||||||||||||||||||||||||  || |||||||||| || | ||||||  |  | || |||| ||||||| ||||||||| ||||||||| |||    
T  21068257 ctgtcataccccaatttttgacctaaggtcc-acattcatacgccttttgaccctgatcaatccctgatttttcagtgaaaaattcagcagaaaggtatt 21068355  T
Q  259 ttaaaatatctcat 272  Q
    |||||||| |||||    
T  21068356 ttaaaatacctcat 21068369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 21537978 - 21538026
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||    
T  21537978 acatcacttcagaagtagaactctatctgcttctaatcaatgttttcag 21538026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 10010541 - 10010600
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||| ||||| |||||||||| |||||||||||||||||||||| ||||||||||    
T  10010541 acatcactttagaagcagaactctatttgcttctgatcagtgttttcagcttaggagaaa 10010600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 1587825 - 1587883
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||| ||||||||||||||||||||||||||||||   || |||||||||||||||||    
T  1587825 acatctcttcagaagtagaactctatctgcttctgacttgtattttcagttaggagaaa 1587883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 20152790 - 20152832
Alignment:
Q  10 acttcagaagtagaactctatctgcttctgatcagtgttttca 52  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  20152790 acttcagaagtagaactctatctgcttctgattagtgttttca 20152832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 20569537 - 20569599
Alignment:
Q  2 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||| ||||||||||||| | |||||||| |||||||||||||||||||||| ||||||||||    
T  20569537 tggaaatcacttcagaagcataactctatttgcttctgatcagtgttttcagcttaggagaaa 20569599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 200
Target Start/End: Complemental strand, 17333932 - 17333892
Alignment:
Q  160 tgtcataccccaatttttgacctaagaacctacattcatac 200  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  17333932 tgtcataccccaatttttgacctaagaccctacattcatac 17333892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 22801783 - 22801735
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    ||||||||| |||||||||||||||||||||| | ||||||||||||||    
T  22801783 acatcactttagaagtagaactctatctgcttataatcagtgttttcag 22801735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 24778640 - 24778592
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    ||||||||||||||| | |||||||| ||||||||||||||||||||||    
T  24778640 acatcacttcagaagcataactctatttgcttctgatcagtgttttcag 24778592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 31801676 - 31801724
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    ||||||||| | ||| |||||||||||||||||||||||||||||||||    
T  31801676 acatcactttaaaagcagaactctatctgcttctgatcagtgttttcag 31801724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 22257501 - 22257427
Alignment:
Q  2 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaag 75  Q
    |||| ||||||||||||| | |||||||| |||||||||| ||||||||||| || ||||||| |||| ||||||    
T  22257501 tggaaatcacttcagaagcataactctatttgcttctgataagtgttttcagctttggagaaaatgaagaaaaag 22257427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 23185123 - 23185161
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatca 43  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  23185123 acatcacttcagaagttgaactctatctgcttctgatca 23185161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 23596386 - 23596424
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatca 43  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  23596386 acatcacttcagaagttgaactctatctgcttctgatca 23596424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 28551712 - 28551770
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||| |||||||||||||||||||||||||||||| | |  |||||||||| ||||||    
T  28551712 acatctcttcagaagtagaactctatctgcttctgaactgcattttcagttatgagaaa 28551770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 34322720 - 34322778
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||| ||||||||||||||||  ||||| || ||||| ||||||||||||||||||||    
T  34322720 acatctcttcagaagtagaactacatctgtttttgatctgtgttttcagttaggagaaa 34322778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 22271401 - 22271333
Alignment:
Q  6 catcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaattgaataaaaag 75  Q
    ||||||||||||||  ||||||||||||||| |||||||||  ||||| |||||||||| ||| ||||||    
T  22271401 catcacttcagaagctgaactctatctgcttatgatcagtgacttcag-taggagaaatcgaagaaaaag 22271333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 22316898 - 22316857
Alignment:
Q  9 cacttcagaagtagaactctatctgcttctgatcagtgtttt 50  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  22316898 cacttcagaagtggaactatatctgcttctgatcagtgtttt 22316857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 24724168 - 24724096
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaattgaataaaaagaaa 78  Q
    |||||||||||||||  ||||||||||||||||||| || || |||||| |||||||||  ||| |||||||||    
T  24724168 acatcacttcagaagctgaactctatctgcttctgaccaatgatttcag-taggagaaaacgaagaaaaagaaa 24724096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 74
Target Start/End: Complemental strand, 40331096 - 40331028
Alignment:
Q  6 catcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaattgaataaaaa 74  Q
    |||| |||||||||||||||||||||||||| ||| | |  |||| ||||||||||||| ||| |||||    
T  40331096 catctcttcagaagtagaactctatctgcttatgaactgcatttttagttaggagaaatagaagaaaaa 40331028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 41122473 - 41122528
Alignment:
Q  7 atcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    |||||||||||||  |||||||||||||||||||||||||  ||||| |||||||||    
T  41122473 atcacttcagaagctgaactctatctgcttctgatcagtgacttcag-taggagaaa 41122528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 40
Target Start/End: Complemental strand, 16494655 - 16494620
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctga 40  Q
    ||||| ||||||||||||||||||||||||||||||    
T  16494655 acatctcttcagaagtagaactctatctgcttctga 16494620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 42
Target Start/End: Original strand, 26367200 - 26367235
Alignment:
Q  7 atcacttcagaagtagaactctatctgcttctgatc 42  Q
    ||||||||||||||| ||||||||||||||||||||    
T  26367200 atcacttcagaagtaaaactctatctgcttctgatc 26367235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 38780705 - 38780646
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||| |||||| ||||||||||| |||| ||||||||| | ||||||||||    
T  38780705 acatcacttcagatgtagaattctatctgcttatgattagtgttttcggcttaggagaaa 38780646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 44839734 - 44839683
Alignment:
Q  12 ttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||||||||||||||||||||||||| | | |  |||||||||||||||||    
T  44839734 ttcagaagtagaactctatctgcttctaaactgcattttcagttaggagaaa 44839683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 17964091 - 17964153
Alignment:
Q  2 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||| ||||| ||||||| |||||||||| || || |||||||||||||||| ||||||||||    
T  17964091 tggaaatcacctcagaagcagaactctatttgtttatgatcagtgttttcagcttaggagaaa 17964153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 31328765 - 31328823
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    |||||||||  |||||| |||| ||||||||||| | |||||||||||| |||||||||    
T  31328765 acatcacttatgaagtaaaactttatctgcttctaaacagtgttttcagataggagaaa 31328823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 31335486 - 31335544
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    |||||||||  |||||| |||| ||||||||||| | |||||||||||| |||||||||    
T  31335486 acatcacttatgaagtaaaactttatctgcttctaaacagtgttttcagataggagaaa 31335544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 40331421 - 40331388
Alignment:
Q  6 catcacttcagaagtagaactctatctgcttctg 39  Q
    |||| |||||||||||||||||||||||||||||    
T  40331421 catctcttcagaagtagaactctatctgcttctg 40331388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 110; Significance: 2e-55; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 159 - 300
Target Start/End: Original strand, 8657547 - 8657688
Alignment:
Q  159 ctgtcataccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaatt 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||| |||||||||||| ||||| |||    
T  8657547 ctgtcataccccaatttttgacctaagaacctacattcatacaccctttgacccataatattctctggctttttagaaaaaaattcggcataaaggtatt 8657646  T
Q  259 ttaaaatatctcatctttgtaccgattcccacccttcttctc 300  Q
    |||||||| |||||||||||||||||||| ||||||||||||    
T  8657647 ttaaaatacctcatctttgtaccgattccgacccttcttctc 8657688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 17246917 - 17246858
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17246917 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaa 17246858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 24628699 - 24628758
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24628699 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaa 24628758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 29120675 - 29120616
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29120675 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaa 29120616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 6516791 - 6516721
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaattgaataaaaag 75  Q
    ||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||  ||||||||||    
T  6516791 acatctcttcagaagtagaactctatctgcttctgatctgtattttcagttaggagaaaaagaataaaaag 6516721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 54679168 - 54679094
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaagaaa 78  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  ||| |||||||||    
T  54679168 acatcacttcagaagtagaactctatctgcttttgatcagtgttttcagcttaggagaaaaagaagaaaaagaaa 54679094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 55379619 - 55379555
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaa 68  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||    
T  55379619 acatcacttcagaagtagaactttatctgcttctgatcagtgttttcagcttaggagaaaatgaa 55379555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 14905127 - 14905186
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  14905127 acatcacttcagaagtagaactctatctgcttctgatcaatgttttcagcttaggagaaa 14905186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 22676362 - 22676421
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22676362 acatcacttcaaaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaa 22676421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 23749833 - 23749774
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  23749833 acatcacttcagaagtagaactctatctacttctgatcagtgttttcagcttaggagaaa 23749774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 56033835 - 56033776
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  56033835 acatcacttcagaagtagaactctatctgcttctgataagtgttttcagcttaggagaaa 56033776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 13576950 - 13577020
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtg-ttttcag-ttaggagaaattgaataaaa 73  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||  ||||||||    
T  13576950 acatcacttcagaagtagaactctatctgcttctgatcagtgtttttcagcttaggagaaaaagaataaaa 13577020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 44397516 - 44397468
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  44397516 acatcacttcagaagcagaactctatctgcttctgatcagtgttttcag 44397468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 3792640 - 3792581
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||    
T  3792640 acatcacttcagaagtagaactctatctgcttctaagcagtgttttcagcttaggagaaa 3792581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 37436332 - 37436379
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca 52  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  37436332 acatcacttcataagtagaactctatctgcttctgatcagtgttttca 37436379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 12600060 - 12600003
Alignment:
Q  7 atcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||    
T  12600060 atcacttcagaagtagaactttatttgcttctgatcagtgttttcagcttaggagaaa 12600003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 14605707 - 14605779
Alignment:
Q  5 acatcacttcagaa-gtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaag 75  Q
    |||||||||||||| |||||| | |||||||||||||||||||||||||| ||||||||||  ||||||||||    
T  14605707 acatcacttcagaaagtagaattatatctgcttctgatcagtgttttcagcttaggagaaaacgaataaaaag 14605779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 277
Target Start/End: Complemental strand, 18483315 - 18483200
Alignment:
Q  162 tcataccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaatttta 261  Q
    ||||||| |||||||| |||||||| ||||| ||||||||| |||| | ||  || ||||| |||||||||| |||||| |||| |||| |||  ||||     
T  18483315 tcatacctcaattttttacctaagatcctactttcatacactctcttatccgaaaaattctttgacttttcaaagaaaatttcgacagataggtcttttg 18483216  T
Q  262 aaatatctcatctttg 277  Q
    ||||||||||| ||||    
T  18483215 aaatatctcatttttg 18483200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 3106218 - 3106276
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||| |||||||||||||||||||||||||||||| | |  |||||||||||||||||    
T  3106218 acatctcttcagaagtagaactctatctgcttctgaactgcattttcagttaggagaaa 3106276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 16852779 - 16852721
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    |||| ||||||||||||||||| |||||||||||||||||| ||||||  |||||||||    
T  16852779 acattacttcagaagtagaactttatctgcttctgatcagtattttcaaataggagaaa 16852721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 16939285 - 16939227
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||| |||||| |||| |||||||||||||||||||| || |||||||||||||||||    
T  16939285 acatctcttcaggagtataactctatctgcttctgatctgtattttcagttaggagaaa 16939227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 10071811 - 10071763
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    |||||||||||||||| ||||||||| ||||||| ||||||||||||||    
T  10071811 acatcacttcagaagtggaactctatttgcttcttatcagtgttttcag 10071763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 22175829 - 22175777
Alignment:
Q  235 agaaaaattcggcagaaaggaattttaaaatatctcatctttgtaccgattcc 287  Q
    |||||||||||||||| ||| ||||||||||| |||||||||||||| |||||    
T  22175829 agaaaaattcggcagagaggtattttaaaatacctcatctttgtaccaattcc 22175777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 15135026 - 15134979
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca 52  Q
    ||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  15135026 acatcactttagaagtggaactctatttgcttctgatcagtgttttca 15134979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 29681315 - 29681378
Alignment:
Q  1 atggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||| ||||||||||||| || ||||||| ||||| |||||||||||||||| ||||||||||    
T  29681315 atggaaatcacttcagaagcagtactctatttgcttatgatcagtgttttcagcttaggagaaa 29681378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 17399482 - 17399540
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||| ||||||||||||||||||||||||||||||   |  |||||||||||||||||    
T  17399482 acatctcttcagaagtagaactctatctgcttctgaattgcattttcagttaggagaaa 17399540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 19611171 - 19611233
Alignment:
Q  2 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||| ||||||||||||| |||||||||| ||||||||||| |||||| ||| ||||||||||    
T  19611171 tggaaatcacttcagaagcagaactctatgtgcttctgatctgtgtttacagtttaggagaaa 19611233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 19665676 - 19665615
Alignment:
Q  2 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||| ||||||||||||| |||||||||| |||||||||||||| ||||||| ||||||||||    
T  19665676 tggaaatcacttcagaagaagaactctatttgcttctgatcagt-ttttcagcttaggagaaa 19665615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 22089589 - 22089548
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtg 46  Q
    |||||||||||||||  |||||||||||||||||||||||||    
T  22089589 acatcacttcagaagctgaactctatctgcttctgatcagtg 22089548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 47522586 - 47522534
Alignment:
Q  220 tctctgacttttcagagaaaaattcggcagaaaggaattttaaaatatctcat 272  Q
    ||||||| ||||||| |||||||||||||| |||| ||||||||||| |||||    
T  47522586 tctctgatttttcagtgaaaaattcggcaggaaggtattttaaaatacctcat 47522534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 10072197 - 10072150
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca 52  Q
    ||||||||||||||||  |||||||  |||||||||||||||||||||    
T  10072197 acatcacttcagaagtgaaactctagttgcttctgatcagtgttttca 10072150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 19884000 - 19883941
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||| |||||| ||| |||||||||||||||| |||||||| || ||||||||||    
T  19884000 acatcacttaagaagtggaattctatctgcttctgattagtgtttttagcttaggagaaa 19883941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 23120848 - 23120773
Alignment:
Q  2 tggacatcacttcagaagtagaactctatctgcttctgatcagt-gttttcag-ttaggagaaattgaataaaaag 75  Q
    |||| ||||||||||||| |||||||||| |||||||||| |||  ||||||| |||||||||| |||| ||||||    
T  23120848 tggaaatcacttcagaagcagaactctatttgcttctgattagtctttttcagcttaggagaaaatgaagaaaaag 23120773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 6640997 - 6640959
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatca 43  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  6640997 acatcacttcagaagctgaactctatctgcttctgatca 6640959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 37986420 - 37986474
Alignment:
Q  10 acttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||||||||  |||||||||| ||||| |||||||||||||||| ||||||||||    
T  37986420 acttcagaataagaactctatttgcttatgatcagtgttttcagtttaggagaaa 37986474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 8686244 - 8686285
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtg 46  Q
    ||||||||||| ||| ||||||| ||||||||||||||||||    
T  8686244 acatcacttcaaaagcagaactcaatctgcttctgatcagtg 8686285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 11900413 - 11900364
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagt 54  Q
    ||||||||||||||   ||||||||||||||||||| ||||| |||||||    
T  11900413 acatcacttcagaatctgaactctatctgcttctgaacagtgatttcagt 11900364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 41115618 - 41115655
Alignment:
Q  7 atcacttcagaagtagaactctatctgcttctgatcag 44  Q
    |||||||||||||  |||||||||||||||||||||||    
T  41115618 atcacttcagaagctgaactctatctgcttctgatcag 41115655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 40
Target Start/End: Original strand, 9752351 - 9752379
Alignment:
Q  12 ttcagaagtagaactctatctgcttctga 40  Q
    |||||||||||||||||||||||||||||    
T  9752351 ttcagaagtagaactctatctgcttctga 9752379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 20055880 - 20055932
Alignment:
Q  99 cttccttggtgaaataagcttcgatgcggctgtaccatgctcgtggtgcttgt 151  Q
    |||||||||||||||| || | ||||| |||| || |||||||||||||||||    
T  20055880 cttccttggtgaaataggcctagatgcagctgaacaatgctcgtggtgcttgt 20055932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 40
Target Start/End: Complemental strand, 38513215 - 38513187
Alignment:
Q  12 ttcagaagtagaactctatctgcttctga 40  Q
    |||||||||||||||||||||||||||||    
T  38513215 ttcagaagtagaactctatctgcttctga 38513187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 55731137 - 55731089
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    |||||||||||||||||||| ||||||| ||| | |||||| |||||||    
T  55731137 acatcacttcagaagtagaaatctatctactttttatcagtattttcag 55731089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1699 (Bit Score: 109; Significance: 7e-55; HSPs: 1)
Name: scaffold1699
Description:

Target: scaffold1699; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 160 - 300
Target Start/End: Complemental strand, 1430 - 1290
Alignment:
Q  160 tgtcataccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaattt 259  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||| ||||    
T  1430 tgtcataccccaattttttacctaagaacctacattcatacaccctctaacccataatattctctggctttttagagaaaaattcggcagaaaggtattt 1331  T
Q  260 taaaatatctcatctttgtaccgattcccacccttcttctc 300  Q
    |||| || |||||||||||||||||||| ||||||||||||    
T  1330 taaattacctcatctttgtaccgattccgacccttcttctc 1290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 109; Significance: 7e-55; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 160 - 300
Target Start/End: Original strand, 51967950 - 51968090
Alignment:
Q  160 tgtcataccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaattt 259  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||    
T  51967950 tgtcataccccaattttttacctaagaacctacattcatacaccctctgacccataatattctctggcttttcaaagaaaaattcggcagaaaggtattt 51968049  T
Q  260 taaaatatctcatctttgtaccgattcccacccttcttctc 300  Q
    ||||||| |||||||||||||||||||  ||| ||||||||    
T  51968050 taaaatacctcatctttgtaccgattctgaccattcttctc 51968090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 160 - 300
Target Start/End: Complemental strand, 15473912 - 15473772
Alignment:
Q  160 tgtcataccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaattt 259  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||| ||||    
T  15473912 tgtcataccccaatttttgacctaagagcatacattcatacaccctctgacccataatattctcgagcttttcagagaaaaattcggcagaaaggtattt 15473813  T
Q  260 taaaatatctcatctttgtaccgattcccacccttcttctc 300  Q
    |||||||  ||||||||||||||||||| ||||||||||||    
T  15473812 taaaatacttcatctttgtaccgattccgacccttcttctc 15473772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 25449357 - 25449415
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  25449357 acatcacttcagaagtataactctatctgcttctgatcagtgttttcagttaggagaaa 25449415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 1577158 - 1577110
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1577158 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 1577110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 23037293 - 23037341
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23037293 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 23037341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 1899656 - 1899597
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1899656 acatcactttagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaa 1899597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 2266395 - 2266336
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  2266395 acatcacttcagaagtagaactctatctgattctgatcagtgttttcagcttaggagaaa 2266336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 2833965 - 2833906
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  2833965 acatcacttcagaagtagagctctatctgcttctgatcagtgttttcagcttaggagaaa 2833906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 22428108 - 22428167
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22428108 acatcatttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaa 22428167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 98 - 157
Target Start/End: Complemental strand, 12795146 - 12795087
Alignment:
Q  98 ccttccttggtgaaataagcttcgatgcggctgtaccatgctcgtggtgcttgtttaagg 157  Q
    |||||||| |||||||| ||||| |||||||||||||||||||||||||| |||||||||    
T  12795146 ccttcctttgtgaaataggcttcaatgcggctgtaccatgctcgtggtgcctgtttaagg 12795087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 14294052 - 14294123
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaag 75  Q
    ||||||||| ||||||| |||||||||| |||||||||||||||||||| |||||||||| |||| ||||||    
T  14294052 acatcactttagaagtataactctatctccttctgatcagtgttttcagcttaggagaaaatgaagaaaaag 14294123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 22600956 - 22601015
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca-gttaggagaaa 63  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||    
T  22600956 acatcacttcagaagtagaactctatctgattctgatcaatgttttcaggttaggagaaa 22601015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 30892374 - 30892303
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaag 75  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||| |||| |||||| ||| ||||||    
T  30892374 acatcactttagaagtagaactctatttgcttctgatcagtgttttcagcttagaagaaatcgaagaaaaag 30892303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 38281672 - 38281613
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||    
T  38281672 acatcacttcagaagtagaactatatctgtttctgatcagtgttttcagcttaggagaaa 38281613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 7309099 - 7309041
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||||||| ||||| |||| ||||| ||||||||||||||||||||||||||||||||    
T  7309099 acatcactttagaagcagaattctatttgcttctgatcagtgttttcagttaggagaaa 7309041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 29215107 - 29215061
Alignment:
Q  7 atcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||    
T  29215107 atcacttcagaagtggaactctatctgcttctgatcagtgttttcag 29215061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 30571511 - 30571453
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||| ||||||||||||||||||| |||||||||||| || |||||||||||||||||    
T  30571511 acatctcttcagaagtagaactctacctgcttctgatctgtattttcagttaggagaaa 30571453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 44824523 - 44824581
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||| ||||||||||||||||  |||||||||||||| ||||||||||||||||||||    
T  44824523 acatctcttcagaagtagaactacatctgcttctgatctgtgttttcagttaggagaaa 44824581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 22153135 - 22153087
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||    
T  22153135 acatcacttcagaagtagaactctatctgcttctgatcaaagttttcag 22153087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 272
Target Start/End: Complemental strand, 44911007 - 44910893
Alignment:
Q  159 ctgtcataccccaatttttgacctaagaacctacattcatacaccctctgacccataatat-tctctgacttttcagagaaaaattcggcagaaaggaat 257  Q
    ||||||||  ||||||||| ||||||||||| ||||||||||||| | |||| |  | ||| ||| ||||||||  || |||||||||||||| ||| ||    
T  44911007 ctgtcatattccaattttttacctaagaacccacattcatacaccgtttgacactgattatgtctttgactttttcgaaaaaaattcggcagagaggtat 44910908  T
Q  258 tttaaaatatctcat 272  Q
    ||||||||| |||||    
T  44910907 tttaaaatacctcat 44910893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 14264198 - 14264243
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgtttt 50  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||    
T  14264198 acatcacttcagaagtagaattctatctgcttttgatcagtgtttt 14264243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 263
Target Start/End: Original strand, 28425165 - 28425269
Alignment:
Q  160 tgtcataccccaatttttgacct-aagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaatt 258  Q
    ||||||||||||||||||||||| |||  ||||||||||| | || | ||||||  |  | |||||||||||| |||||||||| ||||||| ||| |||    
T  28425165 tgtcataccccaatttttgaccttaaggtcctacattcatgcgccgtttgaccctgatcagtctctgactttttagagaaaaatccggcagagaggtatt 28425264  T
Q  259 ttaaa 263  Q
    |||||    
T  28425265 ttaaa 28425269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 32786708 - 32786752
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttt 49  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||    
T  32786708 acatcacttcagaagtggaactttatctgcttctgatcagtgttt 32786752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 22202526 - 22202601
Alignment:
Q  2 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaaga 76  Q
    |||| ||||| ||||||| |||||||||| ||||| |||||||||||||||| ||||||||||  ||| |||||||    
T  22202526 tggaaatcacgtcagaagcagaactctatttgcttatgatcagtgttttcagtttaggagaaaacgaagaaaaaga 22202601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 22202648 - 22202723
Alignment:
Q  2 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaaga 76  Q
    |||| ||||| ||||||| |||||||||| ||||| |||||||||||||||| ||||||||||  ||| |||||||    
T  22202648 tggaaatcacgtcagaagcagaactctatttgcttatgatcagtgttttcagtttaggagaaaacgaagaaaaaga 22202723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 22465582 - 22465653
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaag 75  Q
    |||||||||||||||||||||||   || |||||||||||||||||||| ||||||| ||  ||||||||||    
T  22465582 acatcacttcagaagtagaactccgcctacttctgatcagtgttttcagcttaggagtaaacgaataaaaag 22465653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 10250302 - 10250244
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||| ||| |||||||||||||||| ||||| ||||| || |||||||||||||||||    
T  10250302 acatctctttagaagtagaactctatatgcttttgatctgtattttcagttaggagaaa 10250244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 48571022 - 48571080
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||| ||| ||||||||||||||||||| |||| ||| || |||||||||||||||||    
T  48571022 acatctctttagaagtagaactctatctgtttctaatctgtattttcagttaggagaaa 48571080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 12625318 - 12625359
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtg 46  Q
    |||||||||||||||| |||||||||||||||||||| ||||    
T  12625318 acatcacttcagaagttgaactctatctgcttctgatgagtg 12625359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 19763341 - 19763292
Alignment:
Q  223 ctgacttttcagagaaaaattcggcagaaaggaattttaaaatatctcat 272  Q
    |||||||||||| ||||||||||||||| ||| ||||||||||| |||||    
T  19763341 ctgacttttcagtgaaaaattcggcagataggtattttaaaatacctcat 19763292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 2336048 - 2335996
Alignment:
Q  235 agaaaaattcggcagaaaggaattttaaaatatctcatctttgtaccgattcc 287  Q
    ||||||||||| |||| ||| ||||||||||| |||||||||||||| |||||    
T  2336048 agaaaaattcgacagagaggtattttaaaatacctcatctttgtaccaattcc 2335996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 63
Target Start/End: Original strand, 20959819 - 20959859
Alignment:
Q  24 actctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  20959819 actctatctgcttctgatcagtgttttcagcttaggagaaa 20959859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 40
Target Start/End: Complemental strand, 21983908 - 21983873
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctga 40  Q
    ||||| ||||||||||||||||||||||||||||||    
T  21983908 acatctcttcagaagtagaactctatctgcttctga 21983873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 46088294 - 46088243
Alignment:
Q  12 ttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    |||||||||||||||||||||| |||||| | |  |||||||||||||||||    
T  46088294 ttcagaagtagaactctatctgattctgaactgcattttcagttaggagaaa 46088243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 2267975 - 2267933
Alignment:
Q  9 cacttcagaagtagaactctatctgcttctgatcagtgttttc 51  Q
    ||||| |||||||||||| |||||||||||||||||| |||||    
T  2267975 cactttagaagtagaactatatctgcttctgatcagtattttc 2267933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 272
Target Start/End: Complemental strand, 20521424 - 20521314
Alignment:
Q  162 tcataccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaatttta 261  Q
    ||||||||||||||||||||||||| | |||||||||    | | ||| ||  |  | || ||| |||||||| ||||||||||||| ||||| ||||||    
T  20521424 tcataccccaatttttgacctaagatcatacattcatgtgtcatttgatcctgatcagtccctgtcttttcagtgaaaaattcggcataaaggtatttta 20521325  T
Q  262 aaatatctcat 272  Q
    ||||| |||||    
T  20521324 aaatacctcat 20521314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 17025772 - 17025813
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtg 46  Q
    ||||||||| |||| | |||||||||||||||||||||||||    
T  17025772 acatcactttagaaattgaactctatctgcttctgatcagtg 17025813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 19214913 - 19214860
Alignment:
Q  11 cttcagaagtagaactctatctgcttctgatc-agtgttttcagttaggagaaa 63  Q
    |||| |||||||| |||||||||||||||| | ||||||||||| |||||||||    
T  19214913 cttctgaagtagatctctatctgcttctgaacaagtgttttcagataggagaaa 19214860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 28493092 - 28493137
Alignment:
Q  7 atcacttcagaagtagaactctatctgcttctgatcagtgttttca 52  Q
    ||||||||||||| |||||||||| ||||| ||||| |||||||||    
T  28493092 atcacttcagaagcagaactctatttgcttatgatctgtgttttca 28493137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 36133520 - 36133472
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    ||||||||||| ||||| |||||||||  ||| ||||||||||||||||    
T  36133520 acatcacttcataagtaaaactctatcgacttatgatcagtgttttcag 36133472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 107; Significance: 1e-53; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 162 - 300
Target Start/End: Complemental strand, 33273 - 33135
Alignment:
Q  162 tcataccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaatttta 261  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||    
T  33273 tcataccccaacttatgacctaagaacctacattcatacaccctctgacccataatattctctggcttttcagagaaaaattcggcagaaaagtatttta 33174  T
Q  262 aaatatctcatctttgtaccgattcccacccttcttctc 300  Q
    |||||  ||||||||||||||||||| ||||||||||||    
T  33173 aaatacttcatctttgtaccgattccgacccttcttctc 33135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 79159 - 79215
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggaga 61  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  79159 acatcacttcagaagtagaactctatctgcttctaatcagtgttttcagttaagaga 79215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 106; Significance: 5e-53; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 159 - 300
Target Start/End: Complemental strand, 22232642 - 22232502
Alignment:
Q  159 ctgtcataccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaatt 258  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||| |||    
T  22232642 ctgtcataccccaatttttaacctaagaacctacattcatacaccctctgacccataatattctctg-gttttcagagaaacattcggcagaaaggtatt 22232544  T
Q  259 ttaaaatatctcatctttgtaccgattcccacccttcttctc 300  Q
    |||||||| |||||||||||||||||||| || |||||||||    
T  22232543 ttaaaatacctcatctttgtaccgattccgactcttcttctc 22232502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 160 - 300
Target Start/End: Complemental strand, 3917632 - 3917492
Alignment:
Q  160 tgtcataccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaattt 259  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||| ||||    
T  3917632 tgtcataccccaatttttaacctaagaacctacattcatacaccctctaacccataatattctctggcttttcagagaaaaattcggcataaaggtattt 3917533  T
Q  260 taaaatatctcatctttgtaccgattcccacccttcttctc 300  Q
    ||||||| ||||||||| |||| ||||| ||||||||||||    
T  3917532 taaaatacctcatctttataccaattccgacccttcttctc 3917492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 160 - 283
Target Start/End: Original strand, 18909125 - 18909248
Alignment:
Q  160 tgtcataccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaattt 259  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||||| | ||||    
T  18909125 tgtcataccccaatttttgacctaagaacctacattcatacaccctctgacccaaaatattctttggcttttcagagaaaaattcggcagaaatgtattt 18909224  T
Q  260 taaaatatctcatctttgtaccga 283  Q
    ||||||| ||||||||| ||||||    
T  18909225 taaaatacctcatctttataccga 18909248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 10631446 - 10631387
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  10631446 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaa 10631387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 13435194 - 13435135
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13435194 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaa 13435135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 20731546 - 20731617
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaag 75  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||  ||||||||||    
T  20731546 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttagtagaaaaagaataaaaag 20731617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 24717659 - 24717733
Alignment:
Q  7 atcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggag--aaattgaataaaaagaaa 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||| |||||||||    
T  24717659 atcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaattgaagaaaaagaaa 24717733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 16333038 - 16332980
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  16333038 acatcacttcagaagtagaactctatctgcttctgatctgtattttcagttaggagaaa 16332980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 21617562 - 21617504
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21617562 acatctcttcagaagtagaactctatctgcttctgatctgtgttttcagttaggagaaa 21617504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 17380872 - 17380813
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  17380872 acatcacttcagaagtagaactctatttgcttctgatcagtgttttcagcttaggagaaa 17380813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 21234465 - 21234406
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  21234465 acatcacttcagaagtagaattctatctgcttctgatcagtgttttcagcttaggagaaa 21234406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 21624401 - 21624342
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  21624401 acatcacttcagaagtaaaactctatctgcttctgatcagtgttttcagcttaggagaaa 21624342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 32543572 - 32543513
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca-gttaggagaaa 63  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  32543572 acatcacttcagaagtggaactctatctgcttctgatcagtgttttcaggttaggagaaa 32543513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 19833829 - 19833887
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||    
T  19833829 acatcacttcagaggtggtactctatctgcttctgatcagtgttttcagttaggagaaa 19833887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 22077211 - 22077269
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  22077211 acatctcttcagaagtagaactctatctgcttctgatctgtattttcagttaggagaaa 22077269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 20113473 - 20113533
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatc-agtgttttcag-ttaggagaaa 63  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  20113473 acatcacttcagaagtagaactctatctgcttctgatcaagtgttttcagcttaggagaaa 20113533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 14101284 - 14101343
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  14101284 acatcacttcataagtagaactctatctgcttctgatcagtattttcagcttaggagaaa 14101343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 15532470 - 15532529
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||    
T  15532470 acatcacttcagaagtagaactctatttgctcctgatcagtgttttcagcttaggagaaa 15532529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 18434819 - 18434748
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaag 75  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||| || ||||||| |||| ||||||    
T  18434819 acatcacttcagaagtagaactctatctgcttctgattagtgtttccagctttggagaaaatgaagaaaaag 18434748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 19688042 - 19687995
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca 52  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||    
T  19688042 acatcacttcagaagtagaactttatctgcttctgatcagtgttttca 19687995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 22801452 - 22801409
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgtt 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  22801452 acatcacttcagaagtagaactctatctgcttctgatcagtgtt 22801409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 13601479 - 13601417
Alignment:
Q  2 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||| ||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||    
T  13601479 tggaaatcacttcagaagcagaactctatttgcttctgatcagtgttttcagcttaggagaaa 13601417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 277
Target Start/End: Complemental strand, 14780019 - 14779901
Alignment:
Q  160 tgtcataccccaatttttgacctaagaacctacattcatacaccc-tctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaatt 258  Q
    |||||||| ||||||||||||||||| |||||||||||||||||| | | |||   |  | |||| ||||||||||  |||||||||||||| ||| |||    
T  14780019 tgtcatacaccaatttttgacctaaggacctacattcatacacccttttaacctcgacgagtctcagacttttcagtaaaaaattcggcagagaggtatt 14779920  T
Q  259 ttaaaatatctcatctttg 277  Q
    |||||||| ||||| ||||    
T  14779919 ttaaaatacctcatttttg 14779901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 16876217 - 16876159
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||||||||||||| |||||||||||| || |||||||||||||||||||| ||||||    
T  16876217 acatcacttcagaagcagaactctatctactcctgatcagtgttttcagttaagagaaa 16876159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 9717135 - 9717088
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca 52  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||    
T  9717135 acatcacttcagaagtggaactctatctgcttttgatcagtgttttca 9717088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 15301531 - 15301468
Alignment:
Q  1 atggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||| ||||||| ||||| |||||||||| |||||||||||||||||||||| ||||||||||    
T  15301531 atggaaatcactttagaagcagaactctatttgcttctgatcagtgttttcagcttaggagaaa 15301468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 16528624 - 16528577
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca 52  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||    
T  16528624 acatcacttcagaaatagaactctatctgcttcttatcagtgttttca 16528577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 259
Target Start/End: Complemental strand, 21750720 - 21750621
Alignment:
Q  160 tgtcataccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaattt 259  Q
    ||||||||||||||||||||||||||| || |||||||||  ||   |||||| |   | ||||||| ||||||||||||||||||||| ||||| ||||    
T  21750720 tgtcataccccaatttttgacctaagaccccacattcatatgccagttgacccttttgagtctctgatttttcagagaaaaattcggcaaaaaggtattt 21750621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 7762947 - 7762890
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    |||||||||||||||  ||||||||||||||||||||||||| |||||| |||||||||    
T  7762947 acatcacttcagaagctgaactctatctgcttctgatcagtgatttcag-taggagaaa 7762890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 12422550 - 12422492
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||| |||||||||||||||||| ||||||||| ||  ||||||||||||||||||||    
T  12422550 acatctcttcagaagtagaactctttctgcttctaatatgtgttttcagttaggagaaa 12422492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 15986671 - 15986626
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgtttt 50  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||    
T  15986671 acatcacttcataagtagaactctatctgtttctgatcagtgtttt 15986626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 18377736 - 18377688
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    ||||||||||||||||||||||||||||| || |||||||| |||||||    
T  18377736 acatcacttcagaagtagaactctatctgtttttgatcagtattttcag 18377688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 19085440 - 19085393
Alignment:
Q  6 catcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    |||||||||||||| |||||||||| ||||||| ||||||||||||||    
T  19085440 catcacttcagaagcagaactctatttgcttcttatcagtgttttcag 19085393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 19623296 - 19623237
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||||| || ||||||| ||||||||||||||||||| || ||||||||||    
T  19623296 acatcacttcagaagcaggactctatttgcttctgatcagtgtttttagcttaggagaaa 19623237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 17304106 - 17304163
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    |||||||||||||||  |||||||||||||||||||||||||  ||||| |||||||||    
T  17304106 acatcacttcagaagctgaactctatctgcttctgatcagtgacttcag-taggagaaa 17304163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 19469938 - 19469881
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    |||||||||||||||| |||||||||||| ||||||||||||  ||||| |||||||||    
T  19469938 acatcacttcagaagtggaactctatctgtttctgatcagtgacttcag-taggagaaa 19469881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 25593383 - 25593321
Alignment:
Q  2 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||| ||||||||| ||| | |||||||| |||||||||||||||||||||| ||||||||||    
T  25593383 tggaaatcacttcataagcataactctatttgcttctgatcagtgttttcagcttaggagaaa 25593321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 3680411 - 3680362
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagt 54  Q
    ||||||| |||||||  ||||||||||||||||||||||||| |||||||    
T  3680411 acatcacctcagaagctgaactctatctgcttctgatcagtgatttcagt 3680362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 300
Target Start/End: Complemental strand, 7245477 - 7245400
Alignment:
Q  223 ctgacttttcagagaaaaattcggcagaaaggaattttaaaatatctcatctttgtaccgattcccacccttcttctc 300  Q
    |||||||||||| |||||||||| |||  ||| |||||||||||  |||||| | |||||||||| |||| |||||||    
T  7245477 ctgacttttcagtgaaaaattcgacagggaggtattttaaaatacatcatctatataccgattccaacccctcttctc 7245400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 12041170 - 12041125
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgtttt 50  Q
    ||||||||| |||||||||||||||||||||| ||||||| |||||    
T  12041170 acatcactttagaagtagaactctatctgcttttgatcagggtttt 12041125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 19952434 - 19952483
Alignment:
Q  13 tcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggaga 61  Q
    ||||||||||||||||||||||||||||| ||| ||||||| ||||||||    
T  19952434 tcagaagtagaactctatctgcttctgattagtattttcagcttaggaga 19952483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 40
Target Start/End: Original strand, 19066854 - 19066889
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctga 40  Q
    ||||| ||||||||||||||||||||||||||||||    
T  19066854 acatctcttcagaagtagaactctatctgcttctga 19066889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 33353093 - 33353160
Alignment:
Q  11 cttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaattgaataaaaagaaa 78  Q
    |||||||||||||||||||||||||||||| | |  ||||||||||  |||||  ||| |||||||||    
T  33353093 cttcagaagtagaactctatctgcttctgaactgcattttcagttacaagaaaaagaagaaaaagaaa 33353160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 12348850 - 12348792
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||| ||||| |||||||| ||||||||||| ||||| || |||||||||| ||||||    
T  12348850 acatctcttcaaaagtagaattctatctgcttatgatctgtattttcagttatgagaaa 12348792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 14732952 - 14733014
Alignment:
Q  2 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||| ||||||||||||| | |||||||| || |||||||||||||||| || ||||||||||    
T  14732952 tggaaatcacttcagaagcataactctatttgtttctgatcagtgtttttagcttaggagaaa 14733014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 19169166 - 19169218
Alignment:
Q  220 tctctgacttttcagagaaaaattcggcagaaaggaattttaaaatatctcat 272  Q
    |||||| |||||||| ||||||||||||||| ||| ||||| ||||| |||||    
T  19169166 tctctgtcttttcagtgaaaaattcggcagagaggtattttgaaatacctcat 19169218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 40
Target Start/End: Complemental strand, 26588903 - 26588875
Alignment:
Q  12 ttcagaagtagaactctatctgcttctga 40  Q
    |||||||||||||||||||||||||||||    
T  26588903 ttcagaagtagaactctatctgcttctga 26588875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 277
Target Start/End: Original strand, 27616515 - 27616555
Alignment:
Q  237 aaaaattcggcagaaaggaattttaaaatatctcatctttg 277  Q
    |||||||||||||||||| ||||||||||| ||||| ||||    
T  27616515 aaaaattcggcagaaaggtattttaaaatacctcatatttg 27616555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 29917347 - 29917307
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagt 45  Q
    |||||| ||||||||| |||||||||||||||| |||||||    
T  29917347 acatcagttcagaagtggaactctatctgcttccgatcagt 29917307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 160 - 300
Target Start/End: Original strand, 8949 - 9089
Alignment:
Q  160 tgtcataccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaattt 259  Q
    ||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||| ||||    
T  8949 tgtcatatcctaatttttgacttaagaacctacattcatacaccctctgacccataatattccctggcttttcggagaaaaattcggcagaaaggtattt 9048  T
Q  260 taaaatatctcatctttgtaccgattcccacccttcttctc 300  Q
    ||||||| |||||||||||||||||||| ||||||||||||    
T  9049 taaaatacctcatctttgtaccgattccgacccttcttctc 9089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 105; Significance: 2e-52; HSPs: 75)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 160 - 300
Target Start/End: Complemental strand, 46462129 - 46461989
Alignment:
Q  160 tgtcataccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaattt 259  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||| ||||    
T  46462129 tgtcataccccaattttttacctaagaacctagattcatacaccctttgacctataatattctctggcttttcagagaaaaattcggcagaaaggtattt 46462030  T
Q  260 taaaatatctcatctttgtaccgattcccacccttcttctc 300  Q
    ||||||| |||||||||||||||||||| ||||| ||||||    
T  46462029 taaaatacctcatctttgtaccgattccgaccctccttctc 46461989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 159 - 300
Target Start/End: Complemental strand, 43005703 - 43005563
Alignment:
Q  159 ctgtcataccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaatt 258  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| || |||||| || |||||||||||||||||| |||    
T  43005703 ctgtcataccccaattttttacctaagaacctacattcatacaccctctgacccaaaatattctttggcttttc-gaaaaaaattcggcagaaaggtatt 43005605  T
Q  259 ttaaaatatctcatctttgtaccgattcccacccttcttctc 300  Q
    |||||||| |||||||||||||||||||| |||| |||||||    
T  43005604 ttaaaatacctcatctttgtaccgattccgacccctcttctc 43005563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 160 - 300
Target Start/End: Complemental strand, 44413346 - 44413206
Alignment:
Q  160 tgtcataccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaattt 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||| |||| ||||    
T  44413346 tgtcataccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctatggctttttagagaaaaattcggcagtaaggtattt 44413247  T
Q  260 taaaatatctcatctttgtaccgattcccacccttcttctc 300  Q
    ||||||  |||||||||||||| ||||  ||| ||||||||    
T  44413246 taaaatccctcatctttgtaccaattctgacctttcttctc 44413206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 159 - 264
Target Start/End: Complemental strand, 18157362 - 18157257
Alignment:
Q  159 ctgtcataccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaatt 258  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||    
T  18157362 ctgtcataccccagtttttgacctaagaacctacattcatacaccctctgacccataatattctctggcttttcagagaaaaattcggcagaaaggtatt 18157263  T
Q  259 ttaaaa 264  Q
    ||||||    
T  18157262 ttaaaa 18157257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 4820794 - 4820724
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaattgaataaaaag 75  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  4820794 acatcacttcaaaagtagaactctatctgcttctgattagtgttttcagttatgagaaattgaataaaaag 4820724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 4493853 - 4493794
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4493853 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaa 4493794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 13034702 - 13034772
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaa 74  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||| |||||    
T  13034702 acatcacttcagaagtagaactgtatctgcttctgatcagtgttttcagcttaggagaaaatgaagaaaaa 13034772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 13879452 - 13879404
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  13879452 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 13879404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 2499337 - 2499266
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaag 75  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||| ||||||    
T  2499337 acatcatttcagaagtagaactctatctgcttctgattagtgttttcagcttaggagaaaatgaagaaaaag 2499266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 13473336 - 13473395
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  13473336 acatcacttcagaagtagaactatatctgcttctgatcagtgttttcagcttaggagaaa 13473395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 16546186 - 16546245
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  16546186 acatcacttcagaagtagaactttatctgcttctgatcagtgttttcagcttaggagaaa 16546245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 16619476 - 16619417
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  16619476 acatcacttcagaagtagaactttatctgcttctgatcagtgttttcagcttaggagaaa 16619417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 21691733 - 21691674
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  21691733 acatcacttcagaagtagaactttatctgcttctgatcagtgttttcagcttaggagaaa 21691674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 28623202 - 28623261
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  28623202 acatcacttcagaagtagaactctatctgcttctgatcagtgtgttcagcttaggagaaa 28623261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 9710683 - 9710753
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtg-ttttcag-ttaggagaaattgaataaaa 73  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||  ||||||||    
T  9710683 acatcacttcagaagtagaactctatctgcttctgatcagtgtttttcagcttaggagaaaaagaataaaa 9710753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 15705343 - 15705401
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  15705343 acatctcttcagaagtagaactctatttgcttctgatctgtgttttcagttaggagaaa 15705401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 35954762 - 35954819
Alignment:
Q  7 atcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  35954762 atcacttcagaagtaaaactctatctgcttctgatcagtgttttcagcttaggagaaa 35954819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 224 - 300
Target Start/End: Complemental strand, 7528850 - 7528774
Alignment:
Q  224 tgacttttcagagaaaaattcggcagaaaggaattttaaaatatctcatctttgtaccgattcccacccttcttctc 300  Q
    ||||||||||| ||||||||| ||||  ||| ||||||||||| |||||||||||||||||||| |||| |||||||    
T  7528850 tgacttttcagtgaaaaattcagcagggaggtattttaaaatacctcatctttgtaccgattccgacccctcttctc 7528774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 11792179 - 11792107
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttc-agttaggagaaattgaataaaaaga 76  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||  ||| |||||||    
T  11792179 acatcacttcagaagtagaacactatctgcttctgatcagtgttttcaacttaggagaaaacgaagaaaaaga 11792107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 13138774 - 13138822
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  13138774 acatcacttcagaagtagaactctatctgcttctgatcaatgttttcag 13138822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 14186995 - 14186947
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  14186995 acatcacttcagaagtagaattctatctgcttctgatcagtgttttcag 14186947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 15467224 - 15467152
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaaga 76  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||  ||| |||||||    
T  15467224 acatcacttaagaagtggaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaaga 15467152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 19328859 - 19328907
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  19328859 acatcacttcagaagtagaactctatctgcttgtgatcagtgttttcag 19328907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 21284223 - 21284271
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21284223 acatcacttcagaaatagaactctatctgcttctgatcagtgttttcag 21284271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 41843271 - 41843319
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41843271 acatcacttcagaagtagaactctttctgcttctgatcagtgttttcag 41843319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 4832173 - 4832216
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgtt 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  4832173 acatcacttcagaagtagaactctatctgcttctgatcagtgtt 4832216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 13027800 - 13027871
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaag 75  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||| | |||||||||| |||| ||||||    
T  13027800 acatcactttagaagtagaactctatctgcttctgatcaatgttttcggcttaggagaaaatgaagaaaaag 13027871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 14424616 - 14424557
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||    
T  14424616 acatcacttcagaagtagaactcgatctgcttctgatcagtgtttttagattaggagaaa 14424557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 16315383 - 16315445
Alignment:
Q  2 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||| ||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||    
T  16315383 tggaaatcacttcagaagcagaactctatttgcttctgatcagtgttttcagcttaggagaaa 16315445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 16557466 - 16557516
Alignment:
Q  12 ttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggaga 61  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  16557466 ttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggaga 16557516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 16608196 - 16608146
Alignment:
Q  12 ttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggaga 61  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  16608196 ttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggaga 16608146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 15087862 - 15087813
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatc-agtgttttcag 53  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15087862 acatcacttcagaagtagaactctatctgcttctgatcaagtgttttcag 15087813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 48237687 - 48237732
Alignment:
Q  8 tcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  48237687 tcacttcagaagtagaactctatctacttctgatcagtgttttcag 48237732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 12367606 - 12367678
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca-gttaggagaaattgaataaaaaga 76  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||  ||||||||||  ||| |||||||    
T  12367606 acatcacttcagaagaagaactctatttgcttctgatcagtgttttcaccttaggagaaaacgaagaaaaaga 12367678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 211
Target Start/End: Original strand, 23443600 - 23443651
Alignment:
Q  160 tgtcataccccaatttttgacctaagaacctacattcatacaccctctgacc 211  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||| |||||    
T  23443600 tgtcataccccaatttttgacctaagaccctacattcatacgccctttgacc 23443651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 2914502 - 2914564
Alignment:
Q  2 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||| ||| ||||||||| |||||||||| |||||||||||||||||||||| ||||||||||    
T  2914502 tggaaatctcttcagaagcagaactctatttgcttctgatcagtgttttcagcttaggagaaa 2914564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 8182265 - 8182207
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||| |||||||| ||||||||||||||||||||||| |  |||||||||||||||||    
T  8182265 acatctcttcagaaatagaactctatctgcttctgatctgcattttcagttaggagaaa 8182207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 13261524 - 13261598
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaagaaa 78  Q
    ||||||||||||||| |||||||||| |||||||||||| ||| ||||| ||||||||||  ||| |||||||||    
T  13261524 acatcacttcagaagcagaactctatttgcttctgatcaatgtgttcagcttaggagaaaacgaagaaaaagaaa 13261598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 13731522 - 13731584
Alignment:
Q  2 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||| ||||||||||||| |||||||||| ||||||||||| |||||||||| ||||||||||    
T  13731522 tggaaatcacttcagaagcagaactctatttgcttctgatctgtgttttcagcttaggagaaa 13731584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 15574457 - 15574515
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||| |||||| ||||||||||||||||||||||||| || |||||| ||||||||||    
T  15574457 acatctcttcagtagtagaactctatctgcttctgatctgtattttcaattaggagaaa 15574515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 10884021 - 10884078
Alignment:
Q  7 atcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||| | |||||||| |||||||||||||||||||||| ||||||||||    
T  10884021 atcacttcagaagcataactctatttgcttctgatcagtgttttcagcttaggagaaa 10884078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 272
Target Start/End: Original strand, 11578850 - 11578962
Alignment:
Q  159 ctgtcataccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaatt 258  Q
    |||||||||| || ||||||||| |||| || || |||||||   || ||||||  |||||||| || ||||||| |||||||||||||||| ||| |||    
T  11578850 ctgtcataccaca-tttttgaccgaagatcccactttcatacgttctttgacccgaaatattctttggcttttcaaagaaaaattcggcagagaggtatt 11578948  T
Q  259 ttaaaatatctcat 272  Q
    |||||||| |||||    
T  11578949 ttaaaatacctcat 11578962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 13302168 - 13302111
Alignment:
Q  7 atcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||| |||||||||| |||||||||| ||||||||||| ||||||||||    
T  13302168 atcacttcagaagcagaactctatttgcttctgataagtgttttcagcttaggagaaa 13302111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 16155591 - 16155636
Alignment:
Q  7 atcacttcagaagtagaactctatctgcttctgatcagtgttttca 52  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||    
T  16155591 atcacttcagaagtagaattctatctgcttctgattagtgttttca 16155636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 16317445 - 16317493
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    ||||||||||||||| |||||| ||| ||||||||||||||||||||||    
T  16317445 acatcacttcagaagcagaactttatttgcttctgatcagtgttttcag 16317493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 22580103 - 22580151
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    |||||| ||||||||||||||| ||||||||| ||||||||||||||||    
T  22580103 acatcagttcagaagtagaactttatctgcttttgatcagtgttttcag 22580151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 5001711 - 5001770
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||||| |||||| ||| ||||||||||||||| |||||| ||||||||||    
T  5001711 acatcacttcagaagcagaactttatttgcttctgatcagtgctttcagcttaggagaaa 5001770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 9069073 - 9069010
Alignment:
Q  1 atggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||| ||||||||||||| | |||| ||| |||||||||||||||||||||| ||||||||||    
T  9069073 atggaaatcacttcagaagcaaaactttatttgcttctgatcagtgttttcagcttaggagaaa 9069010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 12175183 - 12175230
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca 52  Q
    ||||||||||| |||||||| | |||||||||||||||||||||||||    
T  12175183 acatcacttcaaaagtagaaatttatctgcttctgatcagtgttttca 12175230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 199
Target Start/End: Original strand, 15820471 - 15820510
Alignment:
Q  160 tgtcataccccaatttttgacctaagaacctacattcata 199  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  15820471 tgtcataccccaatttttgacctaagaccctacattcata 15820510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 29936194 - 29936241
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca 52  Q
    ||||||||||||||| |||||||||| |||||||||||| ||||||||    
T  29936194 acatcacttcagaagcagaactctatttgcttctgatcaatgttttca 29936241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 30025243 - 30025184
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||| ||| |||||||||| |||||||||||||||| ||||||||| ||||||||||    
T  30025243 acatcacatcataagtagaactttatctgcttctgatcaatgttttcagcttaggagaaa 30025184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 30946255 - 30946302
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca 52  Q
    ||||||||||||| |||||||||||||||||||| |||||||| ||||    
T  30946255 acatcacttcagacgtagaactctatctgcttctaatcagtgtattca 30946302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 33421056 - 33421005
Alignment:
Q  12 ttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    |||| ||||| ||||||||| |||||||||| ||||||||||||||||||||    
T  33421056 ttcaaaagtataactctatccgcttctgatctgtgttttcagttaggagaaa 33421005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 33604213 - 33604154
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||| ||||||| |||| ||||| |||||||||||||||||||||| ||||||||||    
T  33604213 acatcacgtcagaagcagaattctatttgcttctgatcagtgttttcagcttaggagaaa 33604154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 198
Target Start/End: Complemental strand, 8913523 - 8913485
Alignment:
Q  160 tgtcataccccaatttttgacctaagaacctacattcat 198  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  8913523 tgtcataccccaatttttgacctaagatcctacattcat 8913485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 13645763 - 13645701
Alignment:
Q  2 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||| |||| |||||||| |||||||||| ||||||||||| |||||||||| ||||||||||    
T  13645763 tggaaatcagttcagaagcagaactctatttgcttctgatcggtgttttcagcttaggagaaa 13645701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 13681607 - 13681545
Alignment:
Q  2 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||| ||||||||||||| |||||||||| ||||||| |||| ||||||||| ||||||||||    
T  13681607 tggaaatcacttcagaagcagaactctatttgcttctaatcaatgttttcagcttaggagaaa 13681545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 272
Target Start/End: Complemental strand, 9019465 - 9019352
Alignment:
Q  160 tgtcataccccaatttttgacctaagaacct-acattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaatt 258  Q
    |||||||||||||| ||||||||||| |||| ||||||||||    | ||| |   |||| ||||||||||||||||||||| || |||||| | | |||    
T  9019465 tgtcataccccaatctttgacctaaggaccttacattcatacgtagtttgatcatgaatagtctctgacttttcagagaaaattttggcagagatgtatt 9019366  T
Q  259 ttaaaatatctcat 272  Q
    |||||||| |||||    
T  9019365 ttaaaatacctcat 9019352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 23280824 - 23280869
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgtttt 50  Q
    ||||||||| |||||| |||| ||||||||||||||||||||||||    
T  23280824 acatcactttagaagtggaacactatctgcttctgatcagtgtttt 23280869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 33692571 - 33692616
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgtttt 50  Q
    |||||||||||||||| ||||||||||| |||||||||| ||||||    
T  33692571 acatcacttcagaagtggaactctatctacttctgatcaatgtttt 33692616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 2266418 - 2266470
Alignment:
Q  11 cttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||||||||||||||| |||||||||||||  ||||||||| |||| |||||    
T  2266418 cttcagaagtagaactcaatctgcttctgatttgtgttttcaattagaagaaa 2266470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 300
Target Start/End: Complemental strand, 18157073 - 18157029
Alignment:
Q  256 attttaaaatatctcatctttgtaccgattcccacccttcttctc 300  Q
    ||||||||||  |||||||||||||||||||| ||||||||||||    
T  18157073 attttaaaatgcctcatctttgtaccgattccgacccttcttctc 18157029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 48063666 - 48063718
Alignment:
Q  11 cttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    |||||||||||||||||||||||||| ||| | |  |||||||||||||||||    
T  48063666 cttcagaagtagaactctatctgcttttgaactgcattttcagttaggagaaa 48063718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 11318707 - 11318656
Alignment:
Q  2 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    |||| |||||||||||||  ||||||||| | ||||||||||||||||||||    
T  11318707 tggaaatcacttcagaagccgaactctattttcttctgatcagtgttttcag 11318656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 14424816 - 14424765
Alignment:
Q  12 ttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    |||||||||||||||||||||||||||||   |  |||||||||||||||||    
T  14424816 ttcagaagtagaactctatctgcttctgaattgcattttcagttaggagaaa 14424765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 40
Target Start/End: Original strand, 32265559 - 32265594
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctga 40  Q
    ||||| ||||||||||||||||||||||||||||||    
T  32265559 acatctcttcagaagtagaactctatctgcttctga 32265594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 277
Target Start/End: Complemental strand, 8913456 - 8913406
Alignment:
Q  227 cttttcagagaaaaattcggcagaaaggaattttaaaatatctcatctttg 277  Q
    |||||||| ||||||||||||||| ||| ||||||||||| ||||| ||||    
T  8913456 cttttcagtgaaaaattcggcagagaggtattttaaaatacctcatttttg 8913406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 13259292 - 13259366
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaagaaa 78  Q
    ||||||||| ||||| |||||||||| |  |||||||||||||| |||| ||||||||||  ||| |||||||||    
T  13259292 acatcactttagaagcagaactctatttatttctgatcagtgttgtcagcttaggagaaaacgaagaaaaagaaa 13259366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 186
Target Start/End: Original strand, 12583625 - 12583654
Alignment:
Q  157 gcctgtcataccccaatttttgacctaaga 186  Q
    ||||||||||||||||||||||||||||||    
T  12583625 gcctgtcataccccaatttttgacctaaga 12583654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 13424766 - 13424807
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtg 46  Q
    |||||||||||||||  ||||||||| |||||||||||||||    
T  13424766 acatcacttcagaagctgaactctatatgcttctgatcagtg 13424807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 24787672 - 24787600
Alignment:
Q  1 atggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaa 73  Q
    ||||| ||||||||||||| |||||||||| ||| ||| || ||||||||||| |||||||||| |||| ||||    
T  24787672 atggaaatcacttcagaagaagaactctatttgc-tctaataagtgttttcagcttaggagaaaatgaagaaaa 24787600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 1292351 - 1292303
Alignment:
Q  15 agaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    |||||||||| ||||||||||||||| | |  |||||||||||||||||    
T  1292351 agaagtagaattctatctgcttctgaactgcattttcagttaggagaaa 1292303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 16310804 - 16310852
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    ||||||||||||||| |||| | ||| |||||||||| |||||||||||    
T  16310804 acatcacttcagaagcagaattatatttgcttctgattagtgttttcag 16310852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 40
Target Start/End: Original strand, 48806736 - 48806764
Alignment:
Q  12 ttcagaagtagaactctatctgcttctga 40  Q
    |||||||||||||||||||||||||||||    
T  48806736 ttcagaagtagaactctatctgcttctga 48806764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 98; Significance: 3e-48; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 159 - 280
Target Start/End: Original strand, 35491055 - 35491176
Alignment:
Q  159 ctgtcataccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaatt 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||||| | |||    
T  35491055 ctgtcataccccaatttttgacctaagaacctacattcatacaccctctgacctagaatattctctggcttttcagagaaaaattcggcagaaaagtatt 35491154  T
Q  259 ttaaaatatctcatctttgtac 280  Q
    |||||||| |||||||||||||    
T  35491155 ttaaaatacctcatctttgtac 35491176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 52283106 - 52283035
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaag 75  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||    
T  52283106 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaataaaaag 52283035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 40799201 - 40799127
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaagaaa 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||| |||||||||    
T  40799201 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagaaa 40799127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 160 - 272
Target Start/End: Complemental strand, 17218159 - 17218047
Alignment:
Q  160 tgtcataccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaattt 259  Q
    ||||||||||||||||||||||||| | ||||||||||||| || ||||||||  |||| ||| | |||||||| || ||| ||| ||||||||| ||||    
T  17218159 tgtcataccccaatttttgacctaacaccctacattcatacgccgtctgaccctgaatagtctttaacttttcaaaggaaatttcagcagaaaggtattt 17218060  T
Q  260 taaaatatctcat 272  Q
    ||||||| |||||    
T  17218059 taaaatacctcat 17218047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 6090039 - 6089980
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  6090039 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaa 6089980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 14968680 - 14968621
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  14968680 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaa 14968621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 29952283 - 29952342
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29952283 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaa 29952342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 30001437 - 30001496
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  30001437 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaa 30001496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 47206974 - 47206915
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  47206974 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaa 47206915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 5212870 - 5212818
Alignment:
Q  11 cttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5212870 cttcagaagtagaactctatctgcttctgatctgtgttttcagttaggagaaa 5212818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 1241921 - 1241980
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  1241921 acatcacttcagaagtagaaatctatctgcttctgatcagtgttttcagcttaggagaaa 1241980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 12727082 - 12727141
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  12727082 acatcacttcagaagtagaattctatctgcttctgatcagtgttttcagcttaggagaaa 12727141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 14954721 - 14954662
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  14954721 acattacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaa 14954662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 20628308 - 20628367
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  20628308 acatcacttcagaagtagaactctatctgcttctgatcactgttttcagcttaggagaaa 20628367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 24776358 - 24776405
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca 52  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24776358 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca 24776405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 49554356 - 49554415
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  49554356 acatcacttcagaagtagaactctatctgcttctgatcaatgttttcagcttaggagaaa 49554415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 11222107 - 11222049
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaa 62  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  11222107 acatcactttagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaa 11222049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 11222859 - 11222801
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaa 62  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  11222859 acatcactttagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaa 11222801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 21639128 - 21639186
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  21639128 acatctcttcagaagtagaactctatctgcttctgatctgtattttcagttaggagaaa 21639186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 18122494 - 18122542
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  18122494 acatcacttcagaagtagaactctatctgctcctgatcagtgttttcag 18122542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 19885924 - 19885996
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaaga 76  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||  ||| |||||||    
T  19885924 acatcacttcagaagtagaactctatttgcttctgataagtgttttcagcttaggagaaaacgaagaaaaaga 19885996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 22804867 - 22804914
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca 52  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22804867 acatcacttcaaaagtagaactctatctgcttctgatcagtgttttca 22804914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 25399101 - 25399160
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttc-agttaggagaaa 63  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||    
T  25399101 acatcacttcagaagtagaactctatctgcttctgattagtgttttcgacttaggagaaa 25399160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 98 - 157
Target Start/End: Complemental strand, 27444863 - 27444804
Alignment:
Q  98 ccttccttggtgaaataagcttcgatgcggctgtaccatgctcgtggtgcttgtttaagg 157  Q
    |||||||| |||||||| ||||| |||||||||||||||||||||||||| |||||||||    
T  27444863 ccttcctttgtgaaataggcttcaatgcggctgtaccatgctcgtggtgcctgtttaagg 27444804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 164 - 300
Target Start/End: Original strand, 37468052 - 37468190
Alignment:
Q  164 ataccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcag--agaaaaattcggcagaaaggaatttta 261  Q
    ||||| ||||||||||| ||||||| || |||||||||||||||||   | |||||| | || |||||  |  | ||||| ||| |||||||| ||||||    
T  37468052 atacctcaatttttgacttaagaacttatattcatacaccctctgatttagaatattttttggctttttgggaaaaaaaaatcgacagaaaggtatttta 37468151  T
Q  262 aaatatctcatctttgtaccgattcccacccttcttctc 300  Q
    ||||| ||||| |||||||||||||| |||| |||||||    
T  37468152 aaatacctcatttttgtaccgattccgacccatcttctc 37468190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 38178491 - 38178550
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||    
T  38178491 acatcacttcagaagaagaactctatctgcttctgattagtgttttcagcttaggagaaa 38178550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 19889782 - 19889844
Alignment:
Q  2 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||||||||||||||||| |||||||||| ||||||| |||||||||||||| ||||||||||    
T  19889782 tggacatcacttcagaagcagaactctatttgcttctaatcagtgttttcagcttaggagaaa 19889844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 46797241 - 46797299
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||| |||||||||||||||||||||||||||||||  || |||||||||||||||||    
T  46797241 acatctcttcagaagtagaactctatctgcttctgatttgtattttcagttaggagaaa 46797299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 31302657 - 31302612
Alignment:
Q  8 tcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  31302657 tcactttagaagtagaactctatctgcttctgatcagtgttttcag 31302612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 2782797 - 2782749
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||    
T  2782797 acatcacttcagaagtagaattctatctgattctgatcagtgttttcag 2782749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 2783187 - 2783139
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||    
T  2783187 acatcacttcagaagtagaattctatctgattctgatcagtgttttcag 2783139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 11189304 - 11189257
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca 52  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||    
T  11189304 acatcacttcataagtagaactctatcttcttctgatcagtgttttca 11189257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 14393841 - 14393888
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca 52  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||    
T  14393841 acatcacttcagaagtagaactctattttcttctgatcagtgttttca 14393888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 29854721 - 29854663
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||    
T  29854721 acatcacttcagatgtagaactctatctgcttctgatc-gtgttttcagtttaggagaaa 29854663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 47406263 - 47406322
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||| |||||| ||||||||| |||||||||||||||||||| ||||||||||    
T  47406263 acatcacttcacaagtagcactctatctccttctgatcagtgttttcagcttaggagaaa 47406322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 50299549 - 50299502
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca 52  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||    
T  50299549 acatcagttcagaagtagaaatctatctgcttctgatcagtgttttca 50299502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 52919735 - 52919676
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||| || ||||||||||||||||| |||||||||||||||| ||||||||||    
T  52919735 acatcacttcaaaaatagaactctatctgcttgtgatcagtgttttcagcttaggagaaa 52919676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 2560496 - 2560450
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttc 51  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||    
T  2560496 acatcacttcaaaagtagaactctatctgcttcttatcagtgttttc 2560450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 41494312 - 41494254
Alignment:
Q  6 catcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||| ||||||||||| | |||||||||||||||||||| ||||||||||    
T  41494312 catcacttcagaaatagaactctatttacttctgatcagtgttttcagcttaggagaaa 41494254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 13823379 - 13823322
Alignment:
Q  7 atcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||||||||||| ||||||| |||||||||||||||||||||||| | ||||||||||    
T  13823379 atcacttcagaattagaactttatctgcttctgatcagtgttttcggcttaggagaaa 13823322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 17667676 - 17667611
Alignment:
Q  10 acttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaa 74  Q
    |||||||||| |||||||||| ||||| |||||||||||||||| |||||||||| |||| |||||    
T  17667676 acttcagaagcagaactctatttgcttatgatcagtgttttcagcttaggagaaaatgaagaaaaa 17667611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 2025397 - 2025345
Alignment:
Q  11 cttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    |||||||||||||||||||||||||||||| | |  |||||||||||||||||    
T  2025397 cttcagaagtagaactctatctgcttctgaactgcattttcagttaggagaaa 2025345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 272
Target Start/End: Original strand, 14282140 - 14282252
Alignment:
Q  160 tgtcataccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaattt 259  Q
    |||||||||||| |||||||| ||||  |  ||  ||| ||||||| ||||||  |||||||| |||||||||| |||||| ||||| ||| ||| ||||    
T  14282140 tgtcataccccattttttgacataaggtcacactctcacacaccctttgacccgcaatattctttgacttttcaaagaaaatttcggtagagaggtattt 14282239  T
Q  260 taaaatatctcat 272  Q
    ||||||| |||||    
T  14282240 taaaatacctcat 14282252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 37470213 - 37470265
Alignment:
Q  235 agaaaaattcggcagaaaggaattttaaaatatctcatctttgtaccgattcc 287  Q
    |||||||||||||||| ||| ||||||||||| |||||||||||||| |||||    
T  37470213 agaaaaattcggcagagaggtattttaaaatacctcatctttgtaccaattcc 37470265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 49669338 - 49669390
Alignment:
Q  11 cttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    |||||||||||||||||||||||||||||||| ||  ||||| ||||||||||    
T  49669338 cttcagaagtagaactctatctgcttctgatctgtactttcaattaggagaaa 49669390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 53057571 - 53057619
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    |||||||||||||||||||||||||||| |||||||| || ||||||||    
T  53057571 acatcacttcagaagtagaactctatctacttctgattagagttttcag 53057619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 16031814 - 16031739
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaagaaat 79  Q
    |||| ||||||||||| ||||||||| ||||||||||||||  |||||| ||||||||||  ||| ||||||||||    
T  16031814 acattacttcagaagtggaactctatttgcttctgatcagtaatttcagcttaggagaaaaagaagaaaaagaaat 16031739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 15902509 - 15902447
Alignment:
Q  2 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||| ||||||||||||| |||||| ||| ||| |||||||||||||||||| ||||||||||    
T  15902509 tggaaatcacttcagaagcagaactttatttgcctctgatcagtgttttcagcttaggagaaa 15902447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 49643607 - 49643669
Alignment:
Q  2 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||| ||||||||| ||| |||||||||| ||||| |||||||||||||||| ||||||||||    
T  49643607 tggaaatcacttcataagcagaactctatttgcttttgatcagtgttttcagcttaggagaaa 49643669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 277
Target Start/End: Original strand, 15619696 - 15619812
Alignment:
Q  160 tgtcataccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaattt 259  Q
    ||||||||||||||||||||||||||  || |||||||||  || | |||||   |  | |||||||| |||||  ||||||||||||||| ||| ||||    
T  15619696 tgtcataccccaatttttgacctaaggtcc-acattcatatgccttttgaccttgatcagtctctgacatttcaatgaaaaattcggcagagaggtattt 15619794  T
Q  260 taaaatatctcatctttg 277  Q
    ||||||| ||||| ||||    
T  15619795 taaaatacctcatttttg 15619812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 8874971 - 8875019
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    ||||||||||||||| | |||| ||| ||||||||||||||||||||||    
T  8874971 acatcacttcagaagcaaaactttatttgcttctgatcagtgttttcag 8875019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 14252460 - 14252512
Alignment:
Q  220 tctctgacttttcagagaaaaattcggcagaaaggaattttaaaatatctcat 272  Q
    ||||||| ||||||| ||||||||||||||| ||| ||||||||||| |||||    
T  14252460 tctctgatttttcagtgaaaaattcggcagagaggtattttaaaatacctcat 14252512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 14310987 - 14310932
Alignment:
Q  7 atcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    |||||||||||||  | ||||||||||||||||||||||| |||||| |||||||||    
T  14310987 atcacttcagaagctggactctatctgcttctgatcagtgatttcag-taggagaaa 14310932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 49967428 - 49967480
Alignment:
Q  235 agaaaaattcggcagaaaggaattttaaaatatctcatctttgtaccgattcc 287  Q
    |||||||||||||||| ||| |||||||||||  ||||||||||||| |||||    
T  49967428 agaaaaattcggcagagaggtattttaaaatacatcatctttgtaccaattcc 49967480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 17239775 - 17239834
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||| ||| |||||||||| ||||| |||||| ||||||||| ||||||||||    
T  17239775 acatcacttcaaaagcagaactctatttgcttttgatcattgttttcagcttaggagaaa 17239834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 40
Target Start/End: Original strand, 30055022 - 30055057
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctga 40  Q
    ||||| ||||||||||||||||||||||||||||||    
T  30055022 acatctcttcagaagtagaactctatctgcttctga 30055057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 33582530 - 33582483
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca 52  Q
    |||||||||||||| ||||| ||||||| ||||| |||||||||||||    
T  33582530 acatcacttcagaattagaaatctatctacttcttatcagtgttttca 33582483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 160 - 279
Target Start/End: Complemental strand, 44363522 - 44363408
Alignment:
Q  160 tgtcataccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaattt 259  Q
    |||||||||| |||||||||| ||||| |||||||||||||  | | ||||||  ||||     ||| |||| |||||||||||| ||| | ||| ||||    
T  44363522 tgtcataccctaatttttgacttaagatcctacattcatacttcttttgaccctgaata-----tgaatttttagagaaaaattcagcatagaggtattt 44363428  T
Q  260 taaaatatctcatctttgta 279  Q
    ||||||| ||||| ||||||    
T  44363427 taaaatacctcatttttgta 44363408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 46350687 - 46350734
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca 52  Q
    |||||| |||| |||||||||||||||||||||| |||||| ||||||    
T  46350687 acatcatttcaaaagtagaactctatctgcttctcatcagtattttca 46350734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 277
Target Start/End: Original strand, 15627043 - 15627160
Alignment:
Q  159 ctgtcataccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaatt 258  Q
    ||||||||||||||||||| |||||||  || |||||||||  || | |||||   |  | |||||||| |||||  ||||||||||||||| ||| |||    
T  15627043 ctgtcataccccaattttttacctaaggtcc-acattcatatgccttttgaccttgatcagtctctgacatttcaatgaaaaattcggcagagaggtatt 15627141  T
Q  259 ttaaaatatctcatctttg 277  Q
    |||||||| ||||| ||||    
T  15627142 ttaaaatacctcatttttg 15627160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 200
Target Start/End: Complemental strand, 16017528 - 16017486
Alignment:
Q  158 cctgtcataccccaatttttgacctaagaacctacattcatac 200  Q
    ||||||||||| ||||||||||||||||| || ||||||||||    
T  16017528 cctgtcataccacaatttttgacctaagaccccacattcatac 16017486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 19250236 - 19250293
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    |||||||||||||||| ||||||||||||||| |||| ||||  ||||| |||||||||    
T  19250236 acatcacttcagaagtggaactctatctgcttttgattagtgacttcag-taggagaaa 19250293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 12963934 - 12964003
Alignment:
Q  7 atcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaag 75  Q
    ||||||||  ||| |||||||||| ||||||| |||||||||||||| | |||||||| |||| ||||||    
T  12963934 atcacttcgtaagcagaactctatttgcttcttatcagtgttttcagctgaggagaaaatgaagaaaaag 12964003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 20724348 - 20724307
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtg 46  Q
    |||||||||||||||  ||| |||||||||||||||||||||    
T  20724348 acatcacttcagaagctgaaatctatctgcttctgatcagtg 20724307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 16014102 - 16014153
Alignment:
Q  160 tgtcataccccaatttttgacctaagaacctacattcatacaccctctgaccc 212  Q
    |||||||| ||||||||||||||||| | |||||||||||| |||| ||||||    
T  16014102 tgtcatactccaatttttgacctaagga-ctacattcatacgccctttgaccc 16014153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 23288127 - 23288075
Alignment:
Q  220 tctctgacttttcagagaaaaattcggcagaaaggaattttaaaatatctcat 272  Q
    ||||||| ||||||| ||||||||||||||  ||| ||||||||||| |||||    
T  23288127 tctctgatttttcagtgaaaaattcggcagggaggtattttaaaatacctcat 23288075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 160 - 300
Target Start/End: Complemental strand, 40236 - 40096
Alignment:
Q  160 tgtcataccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaattt 259  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||| ||| ||||||| ||| ||||| |||||||||||||||||||||| ||||    
T  40236 tgtcatactccaatttttgacctaagaacctacattcatacaccctttgatccagaatattcactggctttttagagaaaaattcggcagaaaggtattt 40137  T
Q  260 taaaatatctcatctttgtaccgattcccacccttcttctc 300  Q
    |||| || ||||||||||||| |||||| |||  |||||||    
T  40136 taaagtacctcatctttgtacggattccgacctctcttctc 40096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 2e-33; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 165 - 300
Target Start/End: Original strand, 30249351 - 30249484
Alignment:
Q  165 taccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaattttaaaa 264  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||| || |||||||||||  |||||  | ||||| |||||||||| | |||||||||    
T  30249351 taccccaatttttgacctaggaacctacattcatacaccgtctgactcagaatattctctggtttttc--aaaaaaaatcggcagaaaagtattttaaaa 30249448  T
Q  265 tatctcatctttgtaccgattcccacccttcttctc 300  Q
    || |||||||||||||||||||| |||| |||||||    
T  30249449 tacctcatctttgtaccgattccgacccctcttctc 30249484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 162 - 277
Target Start/End: Original strand, 13358439 - 13358554
Alignment:
Q  162 tcataccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaatttta 261  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||  |  |||||| |||||||||||| ||||||||||| |||| ||| | ||||    
T  13358439 tcatatcccaatttttgacctaagaccctacattcatacaccctctgatacggaatattatctgacttttcacagaaaaattcgacagagaggtacttta 13358538  T
Q  262 aaatatctcatctttg 277  Q
    ||||| ||||| ||||    
T  13358539 aaatacctcatttttg 13358554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 7746524 - 7746583
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7746524 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaa 7746583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 23880321 - 23880273
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23880321 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 23880273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 6498623 - 6498564
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  6498623 acatcacttcagaagtagaactctatctgcttctaatcagtgttttcagcttaggagaaa 6498564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 33021968 - 33021909
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  33021968 acatcacttcggaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaa 33021909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 11993197 - 11993139
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||    
T  11993197 acatcacttcagaagcagaactctatctgctcctgatcagtgtttttagttaggagaaa 11993139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 21100578 - 21100648
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaa 74  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||| |||| |||||    
T  21100578 acatcacttcaaaagtggaactctatctgcttctgatcagtgttttcagcttaggagaaaatgaagaaaaa 21100648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 26764779 - 26764721
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  26764779 acatctcttcagaagtagaactctatctgcttctgatctatgttttcagttaggagaaa 26764721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 13546355 - 13546403
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  13546355 acatcacttcagaagtagaactctatctgcttctgatcattgttttcag 13546403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 30742248 - 30742200
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  30742248 acatcacttcagaagtagaactatatctgcttctgatcagtgttttcag 30742200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 9399440 - 9399511
Alignment:
Q  4 gacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaa 74  Q
    ||||||||||||||| ||||| |||||||||||||||| ||||||||||| |||||||||| |||| |||||    
T  9399440 gacatcacttcagaaatagaattctatctgcttctgattagtgttttcagcttaggagaaaatgaagaaaaa 9399511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 12353691 - 12353762
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaag 75  Q
    ||||||||||| |||||||||| ||||||||||||||||| |||||||| ||||||||||| ||| ||||||    
T  12353691 acatcacttcataagtagaactttatctgcttctgatcagagttttcagcttaggagaaatcgaagaaaaag 12353762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 13736934 - 13736993
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||    
T  13736934 acatcacttcagaagtggaactctatctgtttctgatcagtgttttcagtttaggagaaa 13736993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 21076011 - 21076070
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||    
T  21076011 acatcacttcagaagtagaactcaatctgcttctgatcagtgttatcagcttaggagaaa 21076070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 31117184 - 31117125
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||    
T  31117184 acatcacttcagaagtagaactctatctggttttgatcagtgttttcagcttaggagaaa 31117125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 28138907 - 28138849
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||| ||||||||||||||||||||||| |||||||| || |||||||||||||||||    
T  28138907 acatctcttcagaagtagaactctatctgtttctgatctgtattttcagttaggagaaa 28138849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 30116702 - 30116760
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||| ||||||||| |||||||||||||||||||||| || |||||||||||||||||    
T  30116702 acatctcttcagaagcagaactctatctgcttctgatctgtattttcagttaggagaaa 30116760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 3246291 - 3246363
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaattgaataaaaagaaa 78  Q
    ||||| |||||||||||||||||||||||||||||||| ||  ||||||||||||||||  ||| |||||||||    
T  3246291 acatctcttcagaagtagaactctatctgcttctgatctgt-atttcagttaggagaaaaagaagaaaaagaaa 3246363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 160 - 277
Target Start/End: Original strand, 22704486 - 22704602
Alignment:
Q  160 tgtcataccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaattt 259  Q
    |||||||| |||||||||||||||||| ||||||||||||| || | || |||  |  | ||||||||||||||| | |||||||| |||| ||| ||||    
T  22704486 tgtcatactccaatttttgacctaagaccctacattcatacgccgtttggccctgatcagtctctgacttttcagtg-aaaattcgacagagaggtattt 22704584  T
Q  260 taaaatatctcatctttg 277  Q
    ||||||| ||||| ||||    
T  22704585 taaaatacctcatttttg 22704602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 9088273 - 9088221
Alignment:
Q  11 cttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    |||||||||||||||||||||||||||||||| || ||||||||||| |||||    
T  9088273 cttcagaagtagaactctatctgcttctgatctgtattttcagttagaagaaa 9088221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 15516270 - 15516218
Alignment:
Q  11 cttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    |||||||||||||||||||||||||||||||  |||| |||||||||||||||    
T  15516270 cttcagaagtagaactctatctgcttctgatatgtgtcttcagttaggagaaa 15516218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 31487517 - 31487458
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||| || ||||||||||| |||||||||||||||||||||| ||||||||||    
T  31487517 acatcacttcaaaattagaactctatttgcttctgatcagtgttttcagcttaggagaaa 31487458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 38227885 - 38227822
Alignment:
Q  215 aatattctctgacttttcagagaaaaattcggcagaaaggaattttaaaatatctcatctttgt 278  Q
    |||||||||||||||||||| ||||||||||||||| ||| | ||||||||| ||||| |||||    
T  38227885 aatattctctgacttttcagtgaaaaattcggcagagaggtactttaaaatacctcatttttgt 38227822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 42242916 - 42242857
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||| |||||||| ||||| |||||||||||||||||||||| ||||||||||    
T  42242916 acatcacttcataagtagaaatctatttgcttctgatcagtgttttcagcttaggagaaa 42242857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 37395476 - 37395418
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaa 62  Q
    |||||||||||||| ||||| ||||||||||||| |||||||||||||| |||||||||    
T  37395476 acatcacttcagaaatagaattctatctgcttctaatcagtgttttcagcttaggagaa 37395418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 33932576 - 33932528
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    |||||| ||||||||||||| ||||| ||||||||||||||||||||||    
T  33932576 acatcatttcagaagtagaaatctatttgcttctgatcagtgttttcag 33932528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 6513255 - 6513306
Alignment:
Q  2 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    |||| ||||||||||||| |||||||||| ||||| ||||||||||||||||    
T  6513255 tggaaatcacttcagaagcagaactctatttgcttatgatcagtgttttcag 6513306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 10848073 - 10848022
Alignment:
Q  12 ttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||||||||||||||||||||||||||| | |  |||||||||||||||||    
T  10848073 ttcagaagtagaactctatctgcttctgaactgcattttcagttaggagaaa 10848022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 22000855 - 22000914
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||||| |||||||| | |||||||| |||||||||||||||||||||| ||||||||||    
T  22000855 acatcatttcagaagcataactctatttgcttctgatcagtgttttcagcttaggagaaa 22000914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 90261 - 90306
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgtttt 50  Q
    |||||||||| |||| |||||||||| |||||||||||||||||||    
T  90261 acatcacttcggaagcagaactctatttgcttctgatcagtgtttt 90306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 21199846 - 21199898
Alignment:
Q  10 acttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||||||||| |||||||||||||||||||||||||  ||||| |||||||||    
T  21199846 acttcagaagttgaactctatctgcttctgatcagtgacttcag-taggagaaa 21199898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 23413804 - 23413863
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||| ||| |||||||||| | |||||| ||||||||||||| ||||||||||    
T  23413804 acatcacttcaaaagcagaactctatttacttctggtcagtgttttcagcttaggagaaa 23413863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 40
Target Start/End: Original strand, 35932834 - 35932869
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctga 40  Q
    ||||| ||||||||||||||||||||||||||||||    
T  35932834 acatctcttcagaagtagaactctatctgcttctga 35932869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 25097871 - 25097928
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    |||||||||||||||  ||| ||||||||||||||||||||  |||||| |||||||||    
T  25097871 acatcacttcagaagctgaaatctatctgcttctgatcagttatttcag-taggagaaa 25097928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 25156963 - 25157020
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    |||||||||||||||  ||| ||||||||||||||||||||  |||||| |||||||||    
T  25156963 acatcacttcagaagctgaaatctatctgcttctgatcagttatttcag-taggagaaa 25157020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 186
Target Start/End: Original strand, 15394824 - 15394853
Alignment:
Q  157 gcctgtcataccccaatttttgacctaaga 186  Q
    ||||||||||||||||||||||||||||||    
T  15394824 gcctgtcataccccaatttttgacctaaga 15394853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 19546358 - 19546406
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    ||||||||||||||| | |||| ||| |||||||||||||||| |||||    
T  19546358 acatcacttcagaagcataactatatttgcttctgatcagtgtcttcag 19546406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 28465177 - 28465233
Alignment:
Q  7 atcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    |||||||||||||||||||||||| |  || ||||| ||  ||||||||||||||||    
T  28465177 atcacttcagaagtagaactctatatttttttgatctgtactttcagttaggagaaa 28465233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 40
Target Start/End: Original strand, 35987059 - 35987087
Alignment:
Q  12 ttcagaagtagaactctatctgcttctga 40  Q
    |||||||||||||||||||||||||||||    
T  35987059 ttcagaagtagaactctatctgcttctga 35987087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 7509 - 7567
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7509 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 7567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 45539331 - 45539405
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaagaaa 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||| |||||||||    
T  45539331 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagaaa 45539405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 36104651 - 36104578
Alignment:
Q  2 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaattgaataaaaag 75  Q
    |||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||| ||||||    
T  36104651 tggacatctcttcagaagtagaactcaatctgcttctgatctgtgttttcagttaggagaaaatgaagaaaaag 36104578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 16206535 - 16206476
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  16206535 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaa 16206476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 9319876 - 9319806
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaa 74  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||  |||||||||    
T  9319876 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttagaagaaaaagaataaaaa 9319806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 245
Target Start/End: Original strand, 13385688 - 13385768
Alignment:
Q  164 ataccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcg 245  Q
    ||||||||||||||||| ||| | ||||||||||||||  |||||||||  |||||||||||||||||||||||||||||||    
T  13385688 ataccccaatttttgac-taaaatcctacattcatacagtctctgacccggaatattctctgacttttcagagaaaaattcg 13385768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 31445406 - 31445358
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  31445406 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 31445358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 17796721 - 17796662
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  17796721 acatcacttcagaagtataactctatctgcttctgatcagtgttttcagcttaggagaaa 17796662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 30422277 - 30422336
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  30422277 acatcacttcagaagtagaactctatttgcttctgatcagtgttttcagcttaggagaaa 30422336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 15336934 - 15336992
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||    
T  15336934 acatcacttcagaagcagaactctatctgctcctgatcagtgatttcagttaggagaaa 15336992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 15425999 - 15426057
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||    
T  15425999 acatcacttcagaagcagaactctatctgctcctgatcagtgatttcagttaggagaaa 15426057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 15517303 - 15517361
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||    
T  15517303 acatcacttcagaagcagaactctatctgctcctgatcagtgatttcagttaggagaaa 15517361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 22673080 - 22673022
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  22673080 acatctcttcagaagtagaactctatctgcttctgatctgtattttcagttaggagaaa 22673022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 17442694 - 17442742
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  17442694 acatcacttcagaagtagaactctatttgcttctgatcagtgttttcag 17442742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 23185593 - 23185641
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23185593 acatcgcttcagaagtagaactctatctgcttctgatcagtgttttcag 23185641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 18121980 - 18122027
Alignment:
Q  6 catcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||    
T  18121980 catcacttcagaagtagaactctatctgcttctgatcaatgttttcag 18122027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 23264474 - 23264533
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||    
T  23264474 acatcacttcagaagtagaattctatctacttctgatcagtgttttcagcttaggagaaa 23264533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 17541333 - 17541406
Alignment:
Q  2 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaa 74  Q
    |||| ||||||||||||| |||||| ||| |||||||||||||||||||||| |||||||||| |||| |||||    
T  17541333 tggaaatcacttcagaagcagaactatatttgcttctgatcagtgttttcagcttaggagaaaatgaagaaaaa 17541406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 6407054 - 6407006
Alignment:
Q  15 agaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||    
T  6407054 agaagtagaactctatctgcttctgatctgtattttcagttaggagaaa 6407006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 29692620 - 29692568
Alignment:
Q  1 atggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    ||||| ||||||||||||| |||||||||| ||||||||||||||||||||||    
T  29692620 atggaaatcacttcagaagcagaactctatttgcttctgatcagtgttttcag 29692568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 19942539 - 19942481
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||    
T  19942539 acatcacttcagaagtagaactctatctgctt-tgatcggtgttttcagcttaggagaaa 19942481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 25163375 - 25163316
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||||| |||||||| | |||||||||||||||||||||| ||||||||||    
T  25163375 acatcacttcagaagcagaactctgtttgcttctgatcagtgttttcagcttaggagaaa 25163316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 14990935 - 14990993
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||| |||||||||||||||||||| ||||||||| | || |||||||||||||||||    
T  14990935 acatctcttcagaagtagaactctatatgcttctgacctgtattttcagttaggagaaa 14990993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 17007617 - 17007555
Alignment:
Q  2 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||| ||||||||||||| |||||| ||| |||||||||||||||||||||| ||||||||||    
T  17007617 tggaaatcacttcagaagcagaactatatttgcttctgatcagtgttttcagcttaggagaaa 17007555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 18152550 - 18152608
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||| |||||||||||||||||||||||||||||||| || |||| ||||| ||||||    
T  18152550 acatctcttcagaagtagaactctatctgcttctgatctgtatttttagttacgagaaa 18152608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 19153331 - 19153269
Alignment:
Q  2 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||| ||||||||||||| | |||||||| |||||||||||||||||||||| ||||||||||    
T  19153331 tggaaatcacttcagaagcataactctatttgcttctgatcagtgttttcagcttaggagaaa 19153269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 20256356 - 20256406
Alignment:
Q  2 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttca 52  Q
    |||| ||||||||||||| |||||||||| |||||||||||||||||||||    
T  20256356 tggaaatcacttcagaagcagaactctatttgcttctgatcagtgttttca 20256406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 20256441 - 20256491
Alignment:
Q  2 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttca 52  Q
    |||| ||||||||||||| |||||||||| |||||||||||||||||||||    
T  20256441 tggaaatcacttcagaagcagaactctatttgcttctgatcagtgttttca 20256491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 19706815 - 19706774
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtg 46  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  19706815 acatcacttcagaagttgaactctatctgcttctgatcagtg 19706774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 35028324 - 35028372
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    ||||||||||| |||||||||| |||||| |||||||||||||||||||    
T  35028324 acatcacttcataagtagaactatatctgtttctgatcagtgttttcag 35028372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 12758586 - 12758648
Alignment:
Q  2 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||| ||||||| ||||| | |||||||| |||||||||||||||||||||| ||||||||||    
T  12758586 tggaaatcactttagaagcaaaactctatttgcttctgatcagtgttttcagtttaggagaaa 12758648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 22662375 - 22662317
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||| |||||||||||||||||||||||||||||||| || ||||   ||||||||||    
T  22662375 acatctcttcagaagtagaactctatctgcttctgatctgtatttttgtttaggagaaa 22662317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 40846262 - 40846308
Alignment:
Q  17 aagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||| |||||||||||||||||||| || |||||||||||||||||    
T  40846262 aagtataactctatctgcttctgatctgtattttcagttaggagaaa 40846308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 43644185 - 43644116
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaattgaataaaaag 75  Q
    |||||||||||||||  |||||||||||||||||||||||||  ||||| ||||| ||| |||| ||||||    
T  43644185 acatcacttcagaagctgaactctatctgcttctgatcagtgaattcag-taggaaaaaatgaaaaaaaag 43644116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 21932180 - 21932135
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgtttt 50  Q
    |||| ||||||||||| || ||||||||||||||||||||||||||    
T  21932180 acattacttcagaagtggatctctatctgcttctgatcagtgtttt 21932135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 277
Target Start/End: Original strand, 28277349 - 28277466
Alignment:
Q  160 tgtcataccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaattt 259  Q
    ||||||| || |||||| || |||||| || || |||| || |||| ||||||  |||||||| ||| |||||| |||||| ||||||||| | | ||||    
T  28277349 tgtcatatcctaattttggatctaagatcccactttcacactccctttgacccgaaatattctttgatttttcaaagaaaatttcggcagagaagtattt 28277448  T
Q  260 taaaatatctcatctttg 277  Q
    ||||||| ||||| ||||    
T  28277449 taaaatacctcatttttg 28277466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 200
Target Start/End: Complemental strand, 27808648 - 27808608
Alignment:
Q  160 tgtcataccccaatttttgacctaagaacctacattcatac 200  Q
    ||||||||||||||||||||||||||| ||| |||||||||    
T  27808648 tgtcataccccaatttttgacctaagaccctgcattcatac 27808608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 43639052 - 43639000
Alignment:
Q  11 cttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    |||||||||||||||||||||||||| ||| | |  |||||||||||||||||    
T  43639052 cttcagaagtagaactctatctgcttatgaactgcattttcagttaggagaaa 43639000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 15934505 - 15934552
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca 52  Q
    ||||||||| |||||| ||||||||||||||| ||||||||| |||||    
T  15934505 acatcactttagaagttgaactctatctgcttttgatcagtgatttca 15934552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 16682097 - 16682159
Alignment:
Q  2 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||| |||||||||||||  ||||| ||| |||||||||||| ||||||||| ||||||||||    
T  16682097 tggaaatcacttcagaagccgaactatatttgcttctgatcattgttttcagcttaggagaaa 16682159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 272
Target Start/End: Complemental strand, 23816677 - 23816631
Alignment:
Q  226 acttttcagagaaaaattcggcagaaaggaattttaaaatatctcat 272  Q
    ||||||||| ||||| ||||||||||||| ||||| |||||||||||    
T  23816677 acttttcagtgaaaacttcggcagaaaggtattttgaaatatctcat 23816631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 198
Target Start/End: Complemental strand, 24655406 - 24655368
Alignment:
Q  160 tgtcataccccaatttttgacctaagaacctacattcat 198  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  24655406 tgtcataccccaatttttgacgtaagatcctacattcat 24655368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 1744499 - 1744462
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatc 42  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  1744499 acatctcttcagaagtagaattctatctgcttctgatc 1744462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 13431465 - 13431498
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttct 38  Q
    ||||| ||||||||||||||||||||||||||||    
T  13431465 acatctcttcagaagtagaactctatctgcttct 13431498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 285
Target Start/End: Original strand, 20733220 - 20733284
Alignment:
Q  220 tctctgacttttcagagaaaaattcggcagaaaggaattttaaaatatctcatctttgtaccgatt 285  Q
    ||||||| ||||||| ||||| ||||||||| ||| ||||||||||| ||||| ||||| ||||||    
T  20733220 tctctgatttttcagtgaaaa-ttcggcagagaggtattttaaaatacctcatttttgttccgatt 20733284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 40
Target Start/End: Original strand, 33561068 - 33561096
Alignment:
Q  12 ttcagaagtagaactctatctgcttctga 40  Q
    |||||||||||||||||||||||||||||    
T  33561068 ttcagaagtagaactctatctgcttctga 33561096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 2767 - 2694
Alignment:
Q  2 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaattgaataaaaag 75  Q
    |||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||| ||||||    
T  2767 tggacatctcttcagaagtagaactcaatctgcttctgatctgtgttttcagttaggagaaaatgaagaaaaag 2694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 2280 - 2206
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaagaaa 78  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||  ||| |||||||||    
T  2280 acatcacttcagaagtagaactctatctgcttctgatcagtgtattcagcttaggagaaaaagaagaaaaagaaa 2206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 24576 - 24634
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  24576 acatcacttcagaagtagagctctatctgcttctgattagtgttttcagttaggagaaa 24634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 3483 - 3556
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaattgaataaaaagaaa 78  Q
    ||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||  ||| |||||||||    
T  3483 acatctcttcagaagtagaactctatctgcttctgatctgtattttcagttaggagaaaaagaagaaaaagaaa 3556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 285
Target Start/End: Complemental strand, 33771 - 33646
Alignment:
Q  160 tgtcataccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaattt 259  Q
    ||||||||||||||||||||||||| | |||||||||||||    | ||||| | |||| ||| |||||||||| || ||| ||||||||| ||| ||||    
T  33771 tgtcataccccaatttttgacctaacatcctacattcatacgttgtttgacctagaatagtctttgacttttcaaaggaaatttcggcagataggtattt 33672  T
Q  260 taaaatatctcatctttgtaccgatt 285  Q
    ||||||| ||||| ||||| ||||||    
T  33671 taaaatacctcatttttgttccgatt 33646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 160 - 272
Target Start/End: Complemental strand, 7588 - 7476
Alignment:
Q  160 tgtcataccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaattt 259  Q
    ||||||||||||||||||||||||| | ||||||||||||| || | ||||    |||||||| ||| ||||||||||||||||||| ||| ||  ||||    
T  7588 tgtcataccccaatttttgacctaaaatcctacattcatacgccttttgacattgaatattctttgatttttcagagaaaaattcggtagagagttattt 7489  T
Q  260 taaaatatctcat 272  Q
    ||||||| |||||    
T  7488 taaaatacctcat 7476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 19454 - 19502
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  19454 acatcacgtcagaagtagaactctatctgcttctgattagtgttttcag 19502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 9277 - 9218
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  9277 acatcacttcagaagtagaattctatctgcttctgatcagtgttttcagcttaggagaaa 9218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 932 - 873
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  932 acatcacttcagaagtagaattctatctgcttctgatcagtgttttcagcttaggagaaa 873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 752 - 823
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaag 75  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||| ||| ||||||    
T  752 acatcacttcagaagtagaattccatctgcttctgatcagtgttttcagcttaggagaaatagaagaaaaag 823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 25739 - 25680
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  25739 acatcacttcagaagtagaactctatttgcttctgatcagtgttttcagcttaggagaaa 25680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 102866 - 102807
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  102866 acatcacttcagaagtagaactctatctgcttatgatcagtgttttcagcttaggagaaa 102807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 110392 - 110450
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  110392 acatctcttcagaagtagaactctatctgcttctgatctgtattttcagttaggagaaa 110450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 20267 - 20324
Alignment:
Q  7 atcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||| |||||||||| | |||||||||||| |||| || ||||||||||    
T  20267 atcacttcagaagcagaactctatttacttctgatcagtttttttagcttaggagaaa 20324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 47; Significance: 7e-18; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 210715 - 210657
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  210715 acatctcttcagaagtagaactctatctgcttctgatctgtattttcagttaggagaaa 210657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 378348 - 378410
Alignment:
Q  2 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||| ||||||||||||| |||||||||| |||||||||| ||||||||||| ||||||||||    
T  378348 tggaaatcacttcagaagcagaactctatttgcttctgattagtgttttcagattaggagaaa 378410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 219547 - 219491
Alignment:
Q  7 atcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||    
T  219547 atcacttcagaagtggaactctatctg-ttctgatcagtgttttcagcttaggagaaa 219491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 300
Target Start/End: Complemental strand, 4707 - 4567
Alignment:
Q  160 tgtcataccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaattt 259  Q
    ||||||||||||||||||||||||| | |||||||||||||  | | ||||||  |||| ||| |||||||||| ||  || ||||||||| |   ||||    
T  4707 tgtcataccccaatttttgacctaacatcctacattcatacgtcgtttgaccctgaatagtctttgacttttcaaaggcaatttcggcagacatatattt 4608  T
Q  260 taaaatatctcatctttgtaccgattcccacccttcttctc 300  Q
    ||||||||||||| ||| | |||||| | | ||||||||||    
T  4607 taaaatatctcatttttattccgatttcgagccttcttctc 4567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 300
Target Start/End: Complemental strand, 4915 - 4775
Alignment:
Q  160 tgtcataccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaattt 259  Q
    ||||||||||||||||||||||||| | |||||||||||||  | | ||||||  |||| ||| |||||||||| ||  || ||||||||| |   ||||    
T  4915 tgtcataccccaatttttgacctaacatcctacattcatacgtcgtttgaccctgaatagtctttgacttttcaaaggcaatttcggcagacatatattt 4816  T
Q  260 taaaatatctcatctttgtaccgattcccacccttcttctc 300  Q
    ||||||||||||| ||| | |||||| | | ||||||||||    
T  4815 taaaatatctcatttttattccgatttcgagccttcttctc 4775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 111400 - 111448
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  111400 acatcacttcaaaagtagaactctatctgcttctgatcagtgttttcag 111448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 6 - 65
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||    
T  6 acatcacttcagaagtagaactcgatctgcttctgatcagtgtttttagattaggagaaa 65  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 7976 - 7921
Alignment:
Q  9 cacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  7976 cacttcagaagtggaactctatctgcttctgatcagtgttttcagcttaggagaaa 7921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 17642 - 17583
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||    
T  17642 acatcacttcagaagtagaaatctatttgcttctgatcagtgttttcagcttaggagaaa 17583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 44; Significance: 5e-16; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 59902 - 59949
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca 52  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||    
T  59902 acatcacttcagaagtagaactctatctacttctgatcagtgttttca 59949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 45975 - 45921
Alignment:
Q  9 cacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    |||||| ||||||||||| ||||||||||||| |||| ||||||| |||||||||    
T  45975 cacttctgaagtagaactttatctgcttctgaacagtattttcagataggagaaa 45921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 63646 - 63592
Alignment:
Q  9 cacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    |||||| ||||||||||| ||||| ||||||| |||||||||||  |||||||||    
T  63646 cacttctgaagtagaactttatctacttctgaacagtgttttcaaataggagaaa 63592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 6524 - 6598
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaagaaa 78  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||| | ||||||||||  ||| |||||||||    
T  6524 acatcacttcagaagtagaactctatctgcttttgataagtgttttcggcttaggagaaaaagaagaaaaagaaa 6598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 23937 - 23879
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||| |||||||||||||| ||||||||||||||||| || |||||||||||||||||    
T  23937 acatctcttcagaagtagaattctatctgcttctgatctgtattttcagttaggagaaa 23879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 22956 - 23014
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||| |||||||||||||||||||||||||| ||||| || |||||||||||||||||    
T  22956 acatctcttcagaagtagaactctatctgcttttgatctgtattttcagttaggagaaa 23014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 729 - 804
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtg-ttttcag-ttaggagaaattgaataaaaagaaa 78  Q
    |||||| ||||||||| ||||  ||||||||||||||||||| ||||||| ||||||||||  ||| |||||||||    
T  729 acatcagttcagaagtggaacattatctgcttctgatcagtgtttttcagcttaggagaaaaagaagaaaaagaaa 804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 10907 - 10967
Alignment:
Q  5 acatcacttcagaagtagaactctatctgc-ttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||    
T  10907 acatcacttcagaagtagaactctatctgctttctgatcagtattttcagcttaggagaaa 10967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 15571 - 15631
Alignment:
Q  5 acatcacttcagaagtagaactctatctgc-ttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||    
T  15571 acatcacttcagaagtagaactctatctgctttctgatcagtattttcagcttaggagaaa 15631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 211671 - 211599
Alignment:
Q  5 acatcacttcagaa-gtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaag 75  Q
    |||||||||||||| |||||| | |||||||||||||||||||||||||| ||||||||||  ||||||||||    
T  211671 acatcacttcagaaagtagaattatatctgcttctgatcagtgttttcagcttaggagaaaacgaataaaaag 211599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 285
Target Start/End: Original strand, 148913 - 149020
Alignment:
Q  178 gacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaattttaaaatatctcatctttg 277  Q
    ||||||| | ||||||||||||   | | ||||||  |||| ||| ||||||||| ||||||||||||||||| | | ||||||||||||||||| ||||    
T  148913 gacctaacatcctacattcatatgtcttttgaccctgaatagtctttgacttttcggagaaaaattcggcagagatgtattttaaaatatctcatttttg 149012  T
Q  278 taccgatt 285  Q
    | ||||||    
T  149013 ttccgatt 149020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 158457 - 158409
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 53  Q
    |||||||||||||||| ||||||||||||||||| || |||| ||||||    
T  158457 acatcacttcagaagtggaactctatctgcttctaataagtgatttcag 158409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 7142 - 7096
Alignment:
Q  4 gacatcacttcagaagtagaactctatctgcttctgatcagtgtttt 50  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||    
T  7142 gacatcacttcagaagtggaacactatctgcttctgatcagtgtttt 7096  T

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Target: scaffold0081 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 13303 - 13246
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    |||||||||||||||| |||||||||||||||||||||||||  ||||| |||||||||    
T  13303 acatcacttcagaagttgaactctatctgcttctgatcagtgacttcag-taggagaaa 13246  T

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Target: scaffold1294 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1294
Description:

Target: scaffold1294; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 2080 - 2039
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtg 46  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  2080 acatcacttcagaagtggaactctatctgcttctgatcagtg 2039  T

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Target: scaffold0555 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 276
Target Start/End: Complemental strand, 5323 - 5218
Alignment:
Q  171 aatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaattttaaaatatctc 270  Q
    ||||||||||||||   ||||| ||||||||| |||||| |   |||||||| |||||||||| |||||| |||| ||| |||| ||||||||| | |||    
T  5323 aatttttgacctaaactcctactttcatacactctctgatctggaatattctttgacttttcaaagaaaatttcgacaggaaggtattttaaaacacctc 5224  T
Q  271 atcttt 276  Q
    ||||||    
T  5223 atcttt 5218  T

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Target: scaffold0530 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 2816 - 2873
Alignment:
Q  7 atcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||| |||||||||| |||||||||| ||||||||||| ||||||||||    
T  2816 atcacttcagaagcagaactctatttgcttctgataagtgttttcagcttaggagaaa 2873  T

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Target: scaffold0011 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 66206 - 66263
Alignment:
Q  6 catcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    |||| ||| |||||||||||||||||||||||||||| |  |||||||||||||||||    
T  66206 catctctttagaagtagaactctatctgcttctgatctgcattttcagttaggagaaa 66263  T

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Target: scaffold0011; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 145249 - 145306
Alignment:
Q  6 catcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    |||| ||||||||||||||||||||||||||||||||    ||||||||||| |||||    
T  145249 catctcttcagaagtagaactctatctgcttctgatctacattttcagttagaagaaa 145306  T

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Target: scaffold0009 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 83672 - 83627
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgtttt 50  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||    
T  83672 acataacttcagaagtggaactctatctgcttctgatcagtgtttt 83627  T

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Target: scaffold0323 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 272
Target Start/End: Complemental strand, 17784 - 17673
Alignment:
Q  160 tgtcataccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaattt 259  Q
    ||||||||||||||||||||||||||  |||||| ||||||  ||| ||||||  |  | |||||||| |||| | | ||||||||||||| ||| ||||    
T  17784 tgtcataccccaatttttgacctaaggtcctacaatcatacgtcctttgaccctgatcagtctctgacatttcggtg-aaaattcggcagagaggtattt 17686  T
Q  260 taaaatatctcat 272  Q
    ||||||| |||||    
T  17685 taaaatacctcat 17673  T

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Target: scaffold0002 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 272
Target Start/End: Complemental strand, 362920 - 362808
Alignment:
Q  160 tgtcataccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaattt 259  Q
    ||||||||||||||||||||||||||  |||||||||||    | | ||||||  |  | |||| |||||||||| ||||||||||||||| ||| ||||    
T  362920 tgtcataccccaatttttgacctaaggtcctacattcatgtgtcgtttgaccccgaccaatctcagacttttcagtgaaaaattcggcagagaggtattt 362821  T
Q  260 taaaatatctcat 272  Q
    |||| || |||||    
T  362820 taaactacctcat 362808  T

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Target: scaffold0567 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 9209 - 9150
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||||| || | ||||| |||||||||||||||||||||| ||||||||||    
T  9209 acatcacttcagaagcagtattctatttgcttctgatcagtgttttcagcttaggagaaa 9150  T

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Target: scaffold0607 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 5443 - 5389
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttagga 59  Q
    ||||| ||||| ||||||||||||||||||||||||||  | |||||||||||||    
T  5443 acatctcttcaaaagtagaactctatctgcttctgatctatattttcagttagga 5389  T

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Target: scaffold0249 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 18559 - 18617
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||| |||||||||||||||||||||| ||||||| | |  |||||||||||||||||    
T  18559 acatctcttcagaagtagaactctatctacttctgaactgcattttcagttaggagaaa 18617  T

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Target: scaffold0247 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 16514 - 16571
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||| |||||||||||||| | ||||||||||||||| || |||||||||||||||||    
T  16514 acatctcttcagaagtagaattttatctgcttctgatctgt-ttttcagttaggagaaa 16571  T

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Target: scaffold0058 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 278
Target Start/End: Complemental strand, 73389 - 73275
Alignment:
Q  164 ataccccaatttttgacctaagaacctacattcatacaccctctgacccataatattctctgacttttcagagaaaaattcggcagaaaggaattttaaa 263  Q
    |||||||||||||| || ||||| |  || |||| || | || ||||||  |||||||| ||||||| ||||||||| |||| |||| ||| ||||||||    
T  73389 ataccccaattttttacgtaagatctcactttcacacgctctttgacccggaatattctttgactttgcagagaaaatttcgacagagaggtattttaaa 73290  T
Q  264 atatctcatctttgt 278  Q
    ||| ||||| |||||    
T  73289 atacctcatttttgt 73275  T

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Target: scaffold0026 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 7193 - 7131
Alignment:
Q  2 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||| ||||||| ||||| | |||||||| |||||||||||||||||||||| ||||||||||    
T  7193 tggaaatcacttaagaagcataactctatttgcttctgatcagtgttttcagcttaggagaaa 7131  T

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Target: scaffold0025 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 73835 - 73783
Alignment:
Q  10 acttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||||||||| ||||||||||||||| ||||||||| |||||| |||||||||    
T  73835 acttcagaagttgaactctatctgcttttgatcagtgatttcag-taggagaaa 73783  T

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Target: scaffold0420 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 200
Target Start/End: Original strand, 10899 - 10939
Alignment:
Q  160 tgtcataccccaatttttgacctaagaacctacattcatac 200  Q
    ||||||||||||||||||||||||||| ||| |||||||||    
T  10899 tgtcataccccaatttttgacctaagaccctgcattcatac 10939  T

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Target: scaffold0029 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 38064 - 38012
Alignment:
Q  235 agaaaaattcggcagaaaggaattttaaaatatctcatctttgtaccgattcc 287  Q
    ||||||||||| |||| ||| ||||||||||| |||||||||||||| |||||    
T  38064 agaaaaattcgacagagaggtattttaaaatacctcatctttgtaccaattcc 38012  T

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Target: scaffold0352 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 40
Target Start/End: Original strand, 1617 - 1652
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctga 40  Q
    ||||| ||||||||||||||||||||||||||||||    
T  1617 acatctcttcagaagtagaactctatctgcttctga 1652  T

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Target: scaffold0334 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 7206 - 7163
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgtt 48  Q
    ||||||||||| |||||||||||||| |||||||||| ||||||    
T  7206 acatcacttcaaaagtagaactctatttgcttctgataagtgtt 7163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 491 - 530
Alignment:
Q  25 ctctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  491 ctctatctgcttctgatcagtgttttcagcttaggagaaa 530  T

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Target: scaffold0146 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 14425 - 14366
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    ||||||||||| ||| |||||||||| ||||| |||||| ||||||||| ||||||||||    
T  14425 acatcacttcaaaagcagaactctatttgcttttgatcattgttttcagcttaggagaaa 14366  T

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Target: scaffold0056 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 40
Target Start/End: Original strand, 35543 - 35578
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctga 40  Q
    ||||| ||||||||||||||||||||||||||||||    
T  35543 acatctcttcagaagtagaactctatctgcttctga 35578  T

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Target: scaffold0045 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 40
Target Start/End: Original strand, 88398 - 88433
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctga 40  Q
    ||||| ||||||||||||||||||||||||||||||    
T  88398 acatctcttcagaagtagaactctatctgcttctga 88433  T

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Target: scaffold0598 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 2586 - 2643
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    |||||||||||||||  ||||||||||||||||||| |||||  ||||| |||||||||    
T  2586 acatcacttcagaagctgaactctatctgcttctgaacagtgacttcag-taggagaaa 2643  T

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Target: scaffold0138 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 16292 - 16238
Alignment:
Q  10 acttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 63  Q
    |||| |||||| ||||||||||||||||||||||||  |||||| ||||||||||    
T  16292 actttagaagtggaactctatctgcttctgatcagtaatttcagcttaggagaaa 16238  T

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Target: scaffold0084 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 48630 - 48556
Alignment:
Q  2 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaag 75  Q
    |||| ||||||||| ||| | ||||||||  ||||||||||||||||| ||| |||||||||| |||| ||||||    
T  48630 tggaaatcacttcaaaagcaaaactctattcgcttctgatcagtgtttccagcttaggagaaaatgaagaaaaag 48556  T

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Target: scaffold0064 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 44665 - 44722
Alignment:
Q  5 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 63  Q
    ||||||||| || ||| ||||||||||||||| ||||||||| |||||| |||||||||    
T  44665 acatcactttagcagtggaactctatctgcttttgatcagtgatttcag-taggagaaa 44722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 14281 - 14208
Alignment:
Q  2 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaa 74  Q
    |||| |||||||||||||  ||||||||| |||||||||||||| |||| || |||||||| |  |||||||||    
T  14281 tggaaatcacttcagaagccgaactctatttgcttctgatcagtatttttagcttaggagagaacgaataaaaa 14208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 1323 - 1250
Alignment:
Q  2 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaa 74  Q
    |||| |||||||||||||  ||||||||| |||||||||||||| |||| || |||||||| |  |||||||||    
T  1323 tggaaatcacttcagaagccgaactctatttgcttctgatcagtatttttagcttaggagagaacgaataaaaa 1250  T

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Target: scaffold0582 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0582
Description:

Target: scaffold0582; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 277
Target Start/End: Complemental strand, 358 - 318
Alignment:
Q  237 aaaaattcggcagaaaggaattttaaaatatctcatctttg 277  Q
    |||||||||||||||||| ||||||||||| ||||| ||||    
T  358 aaaaattcggcagaaaggtattttaaaatacctcatatttg 318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 186
Target Start/End: Original strand, 24299 - 24327
Alignment:
Q  158 cctgtcataccccaatttttgacctaaga 186  Q
    |||||||||||||||||||||||||||||    
T  24299 cctgtcataccccaatttttgacctaaga 24327  T

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Target: scaffold0050 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 41270 - 41218
Alignment:
Q  220 tctctgacttttcagagaaaaattcggcagaaaggaattttaaaatatctcat 272  Q
    ||||||| ||||||| |||||||||| |||| ||| ||||||||||| |||||    
T  41270 tctctgatttttcagtgaaaaattcgacagagaggtattttaaaatacctcat 41218  T

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Target: scaffold0032 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 29118 - 29066
Alignment:
Q  220 tctctgacttttcagagaaaaattcggcagaaaggaattttaaaatatctcat 272  Q
    ||||||| ||||||| ||||||||||||||| ||| ||||| ||||| |||||    
T  29118 tctctgatttttcagtgaaaaattcggcagagaggtattttgaaatacctcat 29066  T

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