View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8576_low_15 (Length: 263)

Name: NF8576_low_15
Description: NF8576
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8576_low_15
NF8576_low_15
[»] scaffold0038 (4 HSPs)
scaffold0038 (19-249)||(43203-43433)
scaffold0038 (34-249)||(117044-117248)
scaffold0038 (22-254)||(27688-27912)
scaffold0038 (27-115)||(34970-35058)
[»] chr6 (21 HSPs)
chr6 (19-249)||(28243041-28243271)
chr6 (22-154)||(28297528-28297660)
chr6 (34-249)||(28325729-28325933)
chr6 (22-154)||(28514413-28514545)
chr6 (27-158)||(28185611-28185745)
chr6 (22-254)||(28227190-28227414)
chr6 (22-110)||(28181354-28181442)
chr6 (27-115)||(28234808-28234896)
chr6 (27-118)||(27337916-27338007)
chr6 (27-118)||(27398656-27398747)
chr6 (31-115)||(26635939-26636023)
chr6 (31-115)||(26741905-26741989)
chr6 (31-115)||(26959415-26959499)
chr6 (22-105)||(27214660-27214743)
chr6 (22-105)||(27234485-27234568)
chr6 (25-82)||(26617865-26617922)
chr6 (25-82)||(26723793-26723850)
chr6 (173-249)||(28181497-28181573)
chr6 (27-82)||(26811754-26811809)
chr6 (42-136)||(26861873-26861967)
chr6 (45-115)||(26937369-26937439)
[»] scaffold0019 (1 HSPs)
scaffold0019 (19-158)||(58093-58232)
[»] chr2 (1 HSPs)
chr2 (31-115)||(17993538-17993622)
[»] chr4 (1 HSPs)
chr4 (43-115)||(5090802-5090874)


Alignment Details
Target: scaffold0038 (Bit Score: 203; Significance: 1e-111; HSPs: 4)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 19 - 249
Target Start/End: Original strand, 43203 - 43433
Alignment:
Q  19 attgagaggttccaaaatagcaaggataacatggagaggttgcagaaatggaagagtgctcttactcaaactgctaatttctctggccaccatttcagtc 118  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||     
T  43203 attgagaagttccaaaatagcacggataacatggagaggttgcagaaatggaagagtgctctaactcaaacagctaacttctctggccaccatttcagtt 43302  T
Q  119 ctaagtacaccacttaactcatgtttagcattcttacatagttacatataacacatttctttaattttctattttctaaccaattcatcttacagttgaa 218  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43303 ctaggtacaccacttaactcatgtttagcattcttacatagttacatataacacatttctttaattttctattttctaaccaattcatcttacagttgaa 43402  T
Q  219 atagaaaatattaaatttattcttaacaagt 249  Q
    |||||||||||||||||||||||||||||||    
T  43403 atagaaaatattaaatttattcttaacaagt 43433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 34 - 249
Target Start/End: Original strand, 117044 - 117248
Alignment:
Q  34 aatagcaaggataacatggagaggttgcagaaatggaagagtgctcttactcaaactgctaatttctctggccaccatttcagtcctaagtacaccactt 133  Q
    ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||||| ||||| ||||||||||||||||||  |||  | ||||    
T  117044 aatagcacggatagcatggagaggttgcagaaatggaagatggctcttactcaaactgctaacttctcaggccaccatttcagtcctgggtaacctactt 117143  T
Q  134 aactcatgtttagcattcttacatagttacatataacacatttctttaattttctattttctaaccaattcatcttacagttgaaatagaaaatattaaa 233  Q
    |||| |||||| |  |||||||||      ||||     ||||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||     
T  117144 aactaatgttttgtgttcttacat------atat-----atttctttaattttctattttctaaccgattcatcttacagttgaaattggaaatattaat 117232  T
Q  234 tttattcttaacaagt 249  Q
    ||||||||||||||||    
T  117233 tttattcttaacaagt 117248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 22 - 254
Target Start/End: Original strand, 27688 - 27912
Alignment:
Q  22 gagaggttccaaaatagcaaggataacatggagaggttgcagaaatggaagagtgctcttactcaaactgctaatttctctggccaccatttcagtccta 121  Q
    |||||||||||||||| |||| ||| |||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||  ||| |||||    
T  27688 gagaggttccaaaataacaagcatagcatggataggttgcagaaatggaagattgctcttactcaaactgctaacttctctggccaccaaatcaatccta 27787  T
Q  122 agtacaccacttaactcatgtttagcattcttacatagttacatataacacatttctttaattttctattttctaaccaattcatcttacagttgaaata 221  Q
     ||||   | || |||||||||        ||||||  ||||||||  || | ||||||||| |||||||||||||| | ||||||| ||  || ||||     
T  27788 ggtaccgtagttcactcatgtt--------ttacattcttacatatgtcatacttctttaatattctattttctaactatttcatctcactatttaaatt 27879  T
Q  222 gaaaatattaaatttattcttaacaagtataat 254  Q
    ||||||||||  |||||||||||||||| ||||    
T  27880 gaaaatattatttttattcttaacaagtttaat 27912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 34970 - 35058
Alignment:
Q  27 gttccaaaatagcaaggataacatggagaggttgcagaaatggaagagtgctcttactcaaactgctaatttctctggccaccatttca 115  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||  |||| || ||||||||||||||||    
T  34970 gttccaaaataacaaggataacatggagaggttgcagaaatggaagatggctcttactcaaacatctaacttttctggccaccatttca 35058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 203; Significance: 1e-111; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 19 - 249
Target Start/End: Original strand, 28243041 - 28243271
Alignment:
Q  19 attgagaggttccaaaatagcaaggataacatggagaggttgcagaaatggaagagtgctcttactcaaactgctaatttctctggccaccatttcagtc 118  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||     
T  28243041 attgagaagttccaaaatagcacggataacatggagaggttgcagaaatggaagagtgctctaactcaaacagctaacttctctggccaccatttcagtt 28243140  T
Q  119 ctaagtacaccacttaactcatgtttagcattcttacatagttacatataacacatttctttaattttctattttctaaccaattcatcttacagttgaa 218  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28243141 ctaggtacaccacttaactcatgtttagcattcttacatagttacatataacacatttctttaattttctattttctaaccaattcatcttacagttgaa 28243240  T
Q  219 atagaaaatattaaatttattcttaacaagt 249  Q
    |||||||||||||||||||||||||||||||    
T  28243241 atagaaaatattaaatttattcttaacaagt 28243271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 22 - 154
Target Start/End: Complemental strand, 28297660 - 28297528
Alignment:
Q  22 gagaggttccaaaatagcaaggataacatggagaggttgcagaaatggaagagtgctcttactcaaactgctaatttctctggccaccatttcagtccta 121  Q
    |||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  28297660 gagaagttccaaaataacaagaataacatggagaggttgcagaaatggaagagtgctcttactcaaactgctaacttctctggccaccatttcaatccta 28297561  T
Q  122 agtacaccacttaactcatgtttagcattctta 154  Q
     |||| |||||| |||||||||| |||||||||    
T  28297560 ggtaccccacttcactcatgttttgcattctta 28297528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 34 - 249
Target Start/End: Original strand, 28325729 - 28325933
Alignment:
Q  34 aatagcaaggataacatggagaggttgcagaaatggaagagtgctcttactcaaactgctaatttctctggccaccatttcagtcctaagtacaccactt 133  Q
    ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||||| ||||| ||||||||||||||||||  |||  | ||||    
T  28325729 aatagcacggatagcatggagaggttgcagaaatggaagatggctcttactcaaactgctaacttctcaggccaccatttcagtcctgggtaacctactt 28325828  T
Q  134 aactcatgtttagcattcttacatagttacatataacacatttctttaattttctattttctaaccaattcatcttacagttgaaatagaaaatattaaa 233  Q
    |||| |||||| |  |||||||||      ||||     ||||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||     
T  28325829 aactaatgttttgtgttcttacat------atat-----atttctttaattttctattttctaaccgattcatcttacagttgaaattggaaatattaat 28325917  T
Q  234 tttattcttaacaagt 249  Q
    ||||||||||||||||    
T  28325918 tttattcttaacaagt 28325933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 22 - 154
Target Start/End: Original strand, 28514413 - 28514545
Alignment:
Q  22 gagaggttccaaaatagcaaggataacatggagaggttgcagaaatggaagagtgctcttactcaaactgctaatttctctggccaccatttcagtccta 121  Q
    |||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  28514413 gagaagttccaaaataacaagaataacatggagaggttgcagaaatggaagagtgctcttactcaaactgctaacttctctggccaccatttcaatccta 28514512  T
Q  122 agtacaccacttaactcatgtttagcattctta 154  Q
     |||| |||||| |||||||||| |||||||||    
T  28514513 ggtaccccacttcactcatgttttgcattctta 28514545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 27 - 158
Target Start/End: Original strand, 28185611 - 28185745
Alignment:
Q  27 gttccaaaatagcaaggataacatggagaggttgcagaaatggaagagtgctcttactcaaactgctaatttctctggccaccatttcagtc---ctaag 123  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||   ||  |    
T  28185611 gttccaaaataacaaggatagcatggagaggttgcagaaatggaagagtgctcttactcaaactgctaacttctctggccaccatttcaatcctgctggg 28185710  T
Q  124 tacaccacttaactcatgtttagcattcttacata 158  Q
    ||| |||||| ||||||||||  ||||||||||||    
T  28185711 taccccacttcactcatgttttacattcttacata 28185745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 22 - 254
Target Start/End: Original strand, 28227190 - 28227414
Alignment:
Q  22 gagaggttccaaaatagcaaggataacatggagaggttgcagaaatggaagagtgctcttactcaaactgctaatttctctggccaccatttcagtccta 121  Q
    |||||||||||||||| |||| ||| |||||| |||||||||||||||||||  |||||||||||||||||||| ||||||||||||||  ||| |||||    
T  28227190 gagaggttccaaaataacaagcatagcatggataggttgcagaaatggaagatggctcttactcaaactgctaacttctctggccaccaaatcaatccta 28227289  T
Q  122 agtacaccacttaactcatgtttagcattcttacatagttacatataacacatttctttaattttctattttctaaccaattcatcttacagttgaaata 221  Q
     ||||   | || |||||||||        ||||||  ||||||||  || | ||||||||| |||||||||||||| | ||||||| ||  || ||||     
T  28227290 ggtaccgtagttcactcatgtt--------ttacattcttacatatgtcatacttctttaatattctattttctaactatttcatctcactatttaaatt 28227381  T
Q  222 gaaaatattaaatttattcttaacaagtataat 254  Q
    ||||||||||  |||||||||||||||| ||||    
T  28227382 gaaaatattatttttattcttaacaagtttaat 28227414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 110
Target Start/End: Original strand, 28181354 - 28181442
Alignment:
Q  22 gagaggttccaaaatagcaaggataacatggagaggttgcagaaatggaagagtgctcttactcaaactgctaatttctctggccacca 110  Q
    |||||||||||||||| |||| ||| |||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  28181354 gagaggttccaaaataacaagcatagcatggataggttgcagaaatggaagattgctcttactcaaactgctaacttctctggccacca 28181442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 28234808 - 28234896
Alignment:
Q  27 gttccaaaatagcaaggataacatggagaggttgcagaaatggaagagtgctcttactcaaactgctaatttctctggccaccatttca 115  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||  |||| || ||||||||||||||||    
T  28234808 gttccaaaataacaaggataacatggagaggttgcagaaatggaagatggctcttactcaaacatctaacttttctggccaccatttca 28234896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 27 - 118
Target Start/End: Complemental strand, 27338007 - 27337916
Alignment:
Q  27 gttccaaaatagcaaggataacatggagaggttgcagaaatggaagagtgctcttactcaaactgctaatttctctggccaccatttcagtc 118  Q
    ||||||||||| |||||| ||||||||||||||| ||||||||||||  |||||||| ||| ||||||| ||||| ||||||||||| ||||    
T  27338007 gttccaaaataacaaggaaaacatggagaggttgaagaaatggaagatggctcttacccaagctgctaacttctccggccaccattttagtc 27337916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 27 - 118
Target Start/End: Complemental strand, 27398747 - 27398656
Alignment:
Q  27 gttccaaaatagcaaggataacatggagaggttgcagaaatggaagagtgctcttactcaaactgctaatttctctggccaccatttcagtc 118  Q
    ||||||||||| |||||| ||||||||||||||| ||||||||||||  |||||||| ||| ||||||| ||||| ||||||||||| ||||    
T  27398747 gttccaaaataacaaggaaaacatggagaggttgaagaaatggaagatggctcttacccaagctgctaacttctccggccaccattttagtc 27398656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 115
Target Start/End: Original strand, 26635939 - 26636023
Alignment:
Q  31 caaaatagcaaggataacatggagaggttgcagaaatggaagagtgctcttactcaaactgctaatttctctggccaccatttca 115  Q
    |||||||||||||| ||||||||| |||||| |||||||||||  |||||||  ||| ||||||| || ||||||||||||||||    
T  26635939 caaaatagcaaggaaaacatggagtggttgctgaaatggaagaaagctcttaaccaagctgctaacttatctggccaccatttca 26636023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 115
Target Start/End: Original strand, 26741905 - 26741989
Alignment:
Q  31 caaaatagcaaggataacatggagaggttgcagaaatggaagagtgctcttactcaaactgctaatttctctggccaccatttca 115  Q
    |||||||||||||| ||||||||| |||||| |||||||||||  |||||||  ||| ||||||| || ||||||||||||||||    
T  26741905 caaaatagcaaggaaaacatggagtggttgctgaaatggaagaaagctcttaaccaagctgctaacttatctggccaccatttca 26741989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 115
Target Start/End: Original strand, 26959415 - 26959499
Alignment:
Q  31 caaaatagcaaggataacatggagaggttgcagaaatggaagagtgctcttactcaaactgctaatttctctggccaccatttca 115  Q
    |||||||||||||| ||||||||| |||||| |||||||||||  |||||||  ||| ||||||| || ||||||||||||||||    
T  26959415 caaaatagcaaggaaaacatggagcggttgctgaaatggaagaaagctcttaaccaagctgctaacttatctggccaccatttca 26959499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 27214660 - 27214743
Alignment:
Q  22 gagaggttccaaaatagcaaggataacatggagaggttgcagaaatggaagagtgctcttactcaaactgctaatttctctggc 105  Q
    |||||||| ||||||| |||||| ||||||||| ||||||||||||||||||  |||||||  ||| ||||||| || ||||||    
T  27214660 gagaggtttcaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagctgctaacttatctggc 27214743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 105
Target Start/End: Complemental strand, 27234568 - 27234485
Alignment:
Q  22 gagaggttccaaaatagcaaggataacatggagaggttgcagaaatggaagagtgctcttactcaaactgctaatttctctggc 105  Q
    |||||||| ||||||| |||||| ||||||||| ||||||||||||||||||  |||||||  ||| ||||||| || ||||||    
T  27234568 gagaggtttcaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagctgctaacttatctggc 27234485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 26617865 - 26617922
Alignment:
Q  25 aggttccaaaatagcaaggataacatggagaggttgcagaaatggaagagtgctctta 82  Q
    ||||||||||||| |||||| ||||||||| ||||||||||||||||||  |||||||    
T  26617865 aggttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctctta 26617922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 26723793 - 26723850
Alignment:
Q  25 aggttccaaaatagcaaggataacatggagaggttgcagaaatggaagagtgctctta 82  Q
    ||||||||||||| |||||| ||||||||| ||||||||||||||||||  |||||||    
T  26723793 aggttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctctta 26723850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 28181497 - 28181573
Alignment:
Q  173 atttctttaattttctattttctaaccaattcatcttacagttgaaatagaaaatattaaatttattcttaacaagt 249  Q
    ||||||| ||| |||||||||| |||   || |||||| |||||||||||  |||||||| ||||||||||||||||    
T  28181497 atttcttgaatgttctattttcgaactgttttatcttatagttgaaataggtaatattaattttattcttaacaagt 28181573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 26811754 - 26811809
Alignment:
Q  27 gttccaaaatagcaaggataacatggagaggttgcagaaatggaagagtgctctta 82  Q
    ||||||||||| |||||| ||||||||  ||||||||||||||||||  |||||||    
T  26811754 gttccaaaataacaaggaaaacatggatcggttgcagaaatggaagatagctctta 26811809  T

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Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 136
Target Start/End: Original strand, 26861873 - 26861967
Alignment:
Q  42 ggataacatggagaggttgcagaaatggaagagtgctcttactcaaactgctaatttctctggccaccatttcagtcctaagtacaccacttaac 136  Q
    ||||||||||||||||||||||| ||||||   |||||| |  ||| ||||||| || || ||| ||||||| ||||||  |||| |||||||||    
T  26861873 ggataacatggagaggttgcagagatggaaagttgctctgaaccaagctgctaacttgtcaggctaccattttagtcctgggtaccccacttaac 26861967  T

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Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 115
Target Start/End: Original strand, 26937369 - 26937439
Alignment:
Q  45 taacatggagaggttgcagaaatggaagagtgctcttactcaaactgctaatttctctggccaccatttca 115  Q
    ||||||||||||||||| |||||||||||  |||||||  ||| | || || || ||||||||||||||||    
T  26937369 taacatggagaggttgcggaaatggaagatagctcttaaccaagcggcaaacttgtctggccaccatttca 26937439  T

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Target: scaffold0019 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 58232 - 58093
Alignment:
Q  19 attgagaggttccaaaatagcaaggataacatggagaggttgcagaaatggaagagtgctcttactcaaactgctaatttctctggccaccatttcagtc 118  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||  ||||||||||| |||||||| ||||||||||||||||||| |     
T  58232 attgagaggttccaaaatagcaaggatagcatagagaggttgcagaaatggaagacagctcttactcagactgctaacttctctggccaccatttcaata 58133  T
Q  119 ctaagtacaccacttaactcatgtttagcattcttacata 158  Q
    ||| |||| |||||| ||||||||||  ||||||||||||    
T  58132 ctaggtaccccactttactcatgttttacattcttacata 58093  T

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Target: chr2 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 115
Target Start/End: Complemental strand, 17993622 - 17993538
Alignment:
Q  31 caaaatagcaaggataacatggagaggttgcagaaatggaagagtgctcttactcaaactgctaatttctctggccaccatttca 115  Q
    |||||||||||||| ||||||||| |||||  |||||||||||  |||||||  ||| ||||||| || ||||||||||||||||    
T  17993622 caaaatagcaaggaaaacatggagcggttgttgaaatggaagaaagctcttaaccaagctgctaacttatctggccaccatttca 17993538  T

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Target: chr4 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 115
Target Start/End: Complemental strand, 5090874 - 5090802
Alignment:
Q  43 gataacatggagaggttgcagaaatggaagagtgctcttactcaaactgctaatttctctggccaccatttca 115  Q
    ||||| ||||||| ||||||||||||| |||  |||||||  ||| | |||||||| |||||| |||||||||    
T  5090874 gataatatggagaagttgcagaaatgggagatggctcttaagcaagcagctaatttgtctggctaccatttca 5090802  T

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