View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8576_low_18 (Length: 241)

Name: NF8576_low_18
Description: NF8576
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8576_low_18
NF8576_low_18
[»] chr6 (32 HSPs)
chr6 (18-225)||(33041598-33041795)
chr6 (119-224)||(9721140-9721245)
chr6 (119-225)||(10818352-10818458)
chr6 (120-224)||(9719034-9719138)
chr6 (114-225)||(1390455-1390566)
chr6 (119-225)||(33236087-33236192)
chr6 (122-221)||(19278039-19278138)
chr6 (119-225)||(1300756-1300862)
chr6 (120-225)||(5585304-5585410)
chr6 (114-225)||(34176471-34176581)
chr6 (162-225)||(21606889-21606952)
chr6 (119-225)||(30487308-30487413)
chr6 (169-224)||(10348850-10348905)
chr6 (119-221)||(14515611-14515713)
chr6 (164-225)||(4097559-4097620)
chr6 (119-188)||(10818231-10818300)
chr6 (120-189)||(26318477-26318546)
chr6 (162-225)||(2900046-2900109)
chr6 (119-206)||(16737998-16738085)
chr6 (166-225)||(31849246-31849305)
chr6 (162-221)||(9298625-9298685)
chr6 (120-188)||(19278211-19278278)
chr6 (119-225)||(665843-665949)
chr6 (166-216)||(7775996-7776046)
chr6 (119-188)||(14515475-14515544)
chr6 (163-210)||(30849960-30850007)
chr6 (125-190)||(23091129-23091195)
chr6 (162-211)||(31799070-31799120)
chr6 (120-185)||(21607020-21607085)
chr6 (163-223)||(1395774-1395834)
chr6 (120-188)||(4097686-4097754)
chr6 (119-159)||(23090997-23091037)
[»] chr1 (39 HSPs)
chr1 (121-225)||(8529935-8530039)
chr1 (114-225)||(41498540-41498652)
chr1 (114-225)||(12234146-12234257)
chr1 (119-225)||(40094935-40095041)
chr1 (119-225)||(30010468-30010574)
chr1 (114-225)||(38509891-38510002)
chr1 (119-220)||(2858934-2859035)
chr1 (114-225)||(43551993-43552100)
chr1 (120-225)||(7444631-7444736)
chr1 (119-225)||(35349468-35349570)
chr1 (120-225)||(20576136-20576239)
chr1 (165-225)||(32951366-32951426)
chr1 (113-188)||(32951491-32951566)
chr1 (162-225)||(36285619-36285682)
chr1 (162-225)||(49946633-49946696)
chr1 (113-225)||(28770859-28770969)
chr1 (169-225)||(50744332-50744389)
chr1 (163-224)||(51597805-51597866)
chr1 (124-188)||(2859105-2859169)
chr1 (162-225)||(40964734-40964798)
chr1 (162-225)||(6563712-6563775)
chr1 (114-181)||(23536777-23536844)
chr1 (114-188)||(35349635-35349709)
chr1 (171-225)||(45585739-45585793)
chr1 (148-225)||(26940874-26940951)
chr1 (119-188)||(30010334-30010403)
chr1 (119-184)||(41498406-41498471)
chr1 (114-206)||(2470727-2470819)
chr1 (119-211)||(2506689-2506781)
chr1 (162-206)||(41676436-41676480)
chr1 (121-184)||(35512974-35513037)
chr1 (138-188)||(10391893-10391943)
chr1 (106-188)||(12233999-12234081)
chr1 (119-168)||(20607410-20607459)
chr1 (115-188)||(25268437-25268510)
chr1 (119-216)||(40709294-40709391)
chr1 (120-188)||(7444481-7444549)
chr1 (162-225)||(10392008-10392072)
chr1 (120-188)||(38510067-38510135)
[»] chr3 (38 HSPs)
chr3 (114-225)||(41110318-41110429)
chr3 (119-225)||(24560353-24560459)
chr3 (137-224)||(52474052-52474139)
chr3 (120-222)||(28581189-28581291)
chr3 (114-225)||(18654597-18654708)
chr3 (114-225)||(41039947-41040058)
chr3 (162-225)||(37102194-37102257)
chr3 (119-225)||(36568906-36569011)
chr3 (136-225)||(46556281-46556369)
chr3 (162-225)||(220442-220505)
chr3 (162-225)||(30200133-30200196)
chr3 (138-224)||(25654991-25655077)
chr3 (168-225)||(9312522-9312579)
chr3 (121-225)||(37807216-37807321)
chr3 (119-225)||(16275707-16275813)
chr3 (119-188)||(34641163-34641232)
chr3 (162-222)||(21773921-21773981)
chr3 (123-225)||(27541937-27542039)
chr3 (121-225)||(10748299-10748398)
chr3 (120-211)||(17474209-17474301)
chr3 (113-188)||(24253895-24253970)
chr3 (114-206)||(26135952-26136044)
chr3 (122-185)||(14897981-14898044)
chr3 (114-188)||(220570-220644)
chr3 (121-211)||(17474356-17474446)
chr3 (138-188)||(28582682-28582732)
chr3 (119-188)||(41110494-41110563)
chr3 (180-224)||(43005804-43005846)
chr3 (119-206)||(13082856-13082943)
chr3 (121-188)||(55428552-55428619)
chr3 (119-201)||(23028086-23028168)
chr3 (120-210)||(40463874-40463964)
chr3 (168-225)||(52185152-52185207)
chr3 (120-185)||(6803377-6803442)
chr3 (123-188)||(21773788-21773853)
chr3 (119-188)||(24560219-24560288)
chr3 (168-225)||(55327506-55327563)
chr3 (140-188)||(30200264-30200312)
[»] chr8 (42 HSPs)
chr8 (119-225)||(34634279-34634385)
chr8 (123-225)||(31543078-31543180)
chr8 (119-225)||(11785662-11785768)
chr8 (125-225)||(11575415-11575514)
chr8 (163-225)||(1281279-1281341)
chr8 (113-219)||(3726859-3726965)
chr8 (119-225)||(31738559-31738665)
chr8 (120-225)||(16653085-16653190)
chr8 (121-224)||(30479721-30479824)
chr8 (123-225)||(36308979-36309081)
chr8 (120-225)||(29690925-29691030)
chr8 (162-225)||(1026894-1026957)
chr8 (147-225)||(2248588-2248666)
chr8 (119-188)||(43732860-43732929)
chr8 (137-224)||(10028259-10028347)
chr8 (156-224)||(30664498-30664566)
chr8 (162-225)||(29358385-29358447)
chr8 (168-225)||(9718530-9718587)
chr8 (162-225)||(37923123-37923186)
chr8 (168-226)||(6315197-6315255)
chr8 (110-184)||(9718656-9718730)
chr8 (120-225)||(11033553-11033659)
chr8 (123-188)||(1281149-1281214)
chr8 (120-188)||(16024327-16024394)
chr8 (162-225)||(7502999-7503062)
chr8 (169-219)||(28083884-28083934)
chr8 (114-184)||(31543249-31543319)
chr8 (190-224)||(35694828-35694862)
chr8 (162-223)||(4247563-4247623)
chr8 (119-187)||(2248454-2248522)
chr8 (161-225)||(7979276-7979340)
chr8 (119-186)||(8815316-8815383)
chr8 (164-210)||(5562012-5562058)
chr8 (163-213)||(13405128-13405178)
chr8 (121-186)||(7394636-7394701)
chr8 (113-206)||(30365126-30365219)
chr8 (179-224)||(37032516-37032561)
chr8 (177-210)||(42919879-42919912)
chr8 (113-189)||(7503126-7503202)
chr8 (121-185)||(11575582-11575646)
chr8 (119-211)||(24243052-24243142)
chr8 (119-216)||(41103506-41103605)
[»] chr5 (43 HSPs)
chr5 (114-223)||(10650552-10650661)
chr5 (119-219)||(1657955-1658055)
chr5 (119-225)||(13634847-13634953)
chr5 (114-225)||(7544272-7544383)
chr5 (119-224)||(8502837-8502942)
chr5 (119-225)||(14245090-14245196)
chr5 (122-223)||(36363170-36363271)
chr5 (119-225)||(37607030-37607136)
chr5 (119-225)||(37779239-37779345)
chr5 (120-213)||(9798615-9798708)
chr5 (119-225)||(26415029-26415136)
chr5 (114-224)||(10476165-10476275)
chr5 (119-225)||(16938615-16938721)
chr5 (119-225)||(28279478-28279584)
chr5 (162-225)||(4373611-4373674)
chr5 (162-225)||(36392195-36392258)
chr5 (168-225)||(20146917-20146974)
chr5 (162-225)||(43543-43607)
chr5 (169-225)||(9857016-9857072)
chr5 (163-223)||(20513491-20513551)
chr5 (162-225)||(10072692-10072755)
chr5 (119-225)||(37551543-37551647)
chr5 (119-225)||(37654373-37654477)
chr5 (119-205)||(14245202-14245288)
chr5 (163-225)||(16501836-16501898)
chr5 (120-194)||(11757070-11757144)
chr5 (119-188)||(13634713-13634782)
chr5 (162-222)||(17780279-17780340)
chr5 (162-225)||(22023503-22023568)
chr5 (119-188)||(26414895-26414964)
chr5 (117-205)||(10650427-10650517)
chr5 (162-225)||(32727822-32727885)
chr5 (119-186)||(34980812-34980879)
chr5 (163-225)||(17024270-17024332)
chr5 (168-225)||(4423347-4423404)
chr5 (162-210)||(2556167-2556215)
chr5 (121-180)||(2550533-2550592)
chr5 (162-225)||(11419237-11419300)
chr5 (119-181)||(10476028-10476090)
chr5 (114-184)||(33744190-33744260)
chr5 (119-185)||(40815299-40815365)
chr5 (119-188)||(16938481-16938550)
chr5 (162-206)||(2550397-2550441)
[»] chr7 (40 HSPs)
chr7 (119-225)||(18231722-18231828)
chr7 (138-226)||(24970187-24970274)
chr7 (123-225)||(4833537-4833639)
chr7 (119-225)||(41496959-41497065)
chr7 (119-225)||(47390992-47391098)
chr7 (120-225)||(42306466-42306571)
chr7 (122-225)||(10315769-10315872)
chr7 (162-225)||(33655153-33655216)
chr7 (119-221)||(40196534-40196636)
chr7 (119-225)||(45940658-45940764)
chr7 (163-224)||(34235053-34235114)
chr7 (114-225)||(13770945-13771054)
chr7 (162-225)||(32872826-32872889)
chr7 (137-223)||(1051520-1051605)
chr7 (119-225)||(13425122-13425228)
chr7 (119-205)||(48881560-48881646)
chr7 (119-188)||(39856038-39856107)
chr7 (137-224)||(25887329-25887417)
chr7 (119-199)||(36267555-36267635)
chr7 (169-225)||(40572287-40572342)
chr7 (119-188)||(31571643-31571712)
chr7 (120-225)||(43230372-43230476)
chr7 (114-222)||(31553182-31553287)
chr7 (119-185)||(33519224-33519290)
chr7 (119-188)||(13771119-13771188)
chr7 (164-225)||(19835845-19835906)
chr7 (119-188)||(28074105-28074174)
chr7 (119-188)||(34228492-34228561)
chr7 (114-196)||(41008348-41008425)
chr7 (119-211)||(30592255-30592347)
chr7 (164-211)||(2087786-2087833)
chr7 (174-225)||(22163167-22163217)
chr7 (174-225)||(22221875-22221925)
chr7 (162-201)||(30891039-30891078)
chr7 (119-186)||(37925843-37925910)
chr7 (114-184)||(47390852-47390922)
chr7 (168-225)||(42087131-42087188)
chr7 (120-184)||(33655285-33655349)
chr7 (161-189)||(34235180-34235208)
chr7 (173-225)||(47229888-47229940)
[»] chr4 (35 HSPs)
chr4 (119-225)||(45742026-45742132)
chr4 (119-224)||(54935206-54935311)
chr4 (119-225)||(41174481-41174587)
chr4 (136-225)||(31348340-31348429)
chr4 (114-225)||(5730827-5730938)
chr4 (119-214)||(6938394-6938489)
chr4 (119-225)||(24565348-24565454)
chr4 (119-225)||(49735470-49735576)
chr4 (119-225)||(54320570-54320676)
chr4 (119-225)||(27735881-27735987)
chr4 (113-202)||(37711282-37711371)
chr4 (162-225)||(34110941-34111003)
chr4 (119-188)||(31348494-31348563)
chr4 (168-224)||(29798422-29798478)
chr4 (174-225)||(16400936-16400987)
chr4 (119-188)||(1968532-1968601)
chr4 (125-225)||(35248822-35248922)
chr4 (137-208)||(21694910-21694981)
chr4 (121-188)||(27735749-27735816)
chr4 (120-183)||(46007879-46007942)
chr4 (112-190)||(2247972-2248050)
chr4 (119-188)||(45132668-45132737)
chr4 (164-205)||(45911327-45911368)
chr4 (119-188)||(54576329-54576398)
chr4 (125-225)||(17938115-17938215)
chr4 (138-225)||(22659325-22659413)
chr4 (119-186)||(54935069-54935137)
chr4 (162-225)||(44784128-44784190)
chr4 (131-225)||(6891496-6891590)
chr4 (162-224)||(36278388-36278450)
chr4 (162-225)||(46007744-46007809)
chr4 (119-185)||(47433885-47433951)
chr4 (114-184)||(47846233-47846303)
chr4 (122-204)||(55510326-55510407)
chr4 (119-207)||(37761467-37761555)
[»] chr2 (38 HSPs)
chr2 (119-225)||(23748231-23748337)
chr2 (117-219)||(8426879-8426981)
chr2 (119-225)||(36347543-36347649)
chr2 (119-225)||(36046206-36046312)
chr2 (156-225)||(15224733-15224802)
chr2 (119-225)||(34209600-34209706)
chr2 (160-221)||(16565917-16565978)
chr2 (119-225)||(9631696-9631802)
chr2 (141-225)||(36566874-36566959)
chr2 (119-223)||(40022510-40022615)
chr2 (162-225)||(27926689-27926752)
chr2 (162-225)||(39732774-39732837)
chr2 (166-216)||(1583222-1583272)
chr2 (162-219)||(7681386-7681443)
chr2 (119-188)||(36347714-36347783)
chr2 (119-211)||(35736337-35736429)
chr2 (119-210)||(887261-887351)
chr2 (162-225)||(39821805-39821868)
chr2 (162-225)||(42316809-42316872)
chr2 (113-211)||(45257456-45257555)
chr2 (117-185)||(9426985-9427053)
chr2 (119-187)||(15224868-15224936)
chr2 (119-195)||(17380007-17380083)
chr2 (120-211)||(31795772-31795863)
chr2 (119-186)||(34187577-34187644)
chr2 (179-225)||(17379948-17379994)
chr2 (119-224)||(19566822-19566928)
chr2 (123-225)||(12541902-12541999)
chr2 (111-188)||(39732901-39732978)
chr2 (122-181)||(8427051-8427110)
chr2 (113-188)||(22356177-22356252)
chr2 (174-225)||(28262500-28262551)
chr2 (119-186)||(31061361-31061428)
chr2 (114-188)||(35736172-35736246)
chr2 (119-212)||(16713494-16713587)
chr2 (119-188)||(36046375-36046443)
chr2 (156-225)||(29525768-29525839)
chr2 (113-185)||(41841678-41841750)
[»] scaffold0067 (2 HSPs)
scaffold0067 (113-225)||(39182-39295)
scaffold0067 (119-188)||(39363-39432)
[»] scaffold0171 (1 HSPs)
scaffold0171 (138-224)||(16087-16173)
[»] scaffold0262 (1 HSPs)
scaffold0262 (123-225)||(16302-16404)
[»] scaffold0198 (1 HSPs)
scaffold0198 (120-205)||(3150-3235)
[»] scaffold0026 (2 HSPs)
scaffold0026 (156-222)||(1311-1377)
scaffold0026 (120-188)||(1175-1243)
[»] scaffold0294 (1 HSPs)
scaffold0294 (116-225)||(15399-15507)
[»] scaffold0007 (1 HSPs)
scaffold0007 (121-211)||(242366-242456)
[»] scaffold0096 (2 HSPs)
scaffold0096 (164-225)||(6719-6780)
scaffold0096 (114-185)||(6581-6652)
[»] scaffold0341 (1 HSPs)
scaffold0341 (162-225)||(18905-18968)
[»] scaffold0240 (1 HSPs)
scaffold0240 (119-185)||(17716-17780)
[»] scaffold0012 (1 HSPs)
scaffold0012 (121-184)||(184784-184847)


Alignment Details
Target: chr6 (Bit Score: 149; Significance: 8e-79; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 18 - 225
Target Start/End: Complemental strand, 33041795 - 33041598
Alignment:
Q  18 agacattaatattgtgaacttacttggtgttatttagttgtggtgagagtaatgtttcattgtctcatttagtttgagttacttaaaaatggttgtttta 117  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  33041795 agacattaatattgtgaacttacttggtgttatttagttatggtgagagtaatgtttcattgtctcatttagtttgagttacctaaaaatggttgtttta 33041696  T
Q  118 tggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaac 217  Q
    ||||||||||||||||||||||||||||||||||           |||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  33041695 tggtgtgtttggatggaaagtttaggaggggaag----------atttattttttatttttaaattacggatactatgaaatgttttttaaaaagttaac 33041606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 119 - 224
Target Start/End: Original strand, 9721140 - 9721245
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    ||||||||||||| ||| |||||||||||||||||| ||||  ||||| ||||||||||||||||||||| |||||| ||| ||||||||||||||||||    
T  9721140 ggtgtgtttggattgaaggtttaggaggggaagggaggggagggtttatttttcatttttaaattacggacactatggaatgttttttaaaaagttaaca 9721239  T
Q  219 tattaa 224  Q
    ||||||    
T  9721240 tattaa 9721245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 10818458 - 10818352
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    ||||||||||||| || ||||||||||||| ||||| ||||  ||||||||||||||||||||||||||| |||||||||| ||||||||||  ||||||    
T  10818458 ggtgtgtttggattgagagtttaggaggggtagggaggggagggtttacttttcatttttaaattacggacactatgaaatgttttttaaaatattaaca 10818359  T
Q  219 tattaac 225  Q
    |||||||    
T  10818358 tattaac 10818352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 120 - 224
Target Start/End: Original strand, 9719034 - 9719138
Alignment:
Q  120 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 219  Q
    |||||||||||| ||  |||||||||||||||||| ||||   |||| ||||||||||||||||||||| |||||| ||| |||||||||||||||||||    
T  9719034 gtgtgtttggattgagggtttaggaggggaagggaggggaggatttatttttcatttttaaattacggacactatggaatgttttttaaaaagttaacat 9719133  T
Q  220 attaa 224  Q
    |||||    
T  9719134 attaa 9719138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 114 - 225
Target Start/End: Complemental strand, 1390566 - 1390455
Alignment:
Q  114 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 213  Q
    |||| |||||||||||||| |  |||||||||||||| ||| | |    ||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  1390566 tttaaggtgtgtttggatgaagggtttaggaggggaatggaggaggggttttacttttcatttttaaattactgacactatgaaatattttttaaaaagt 1390467  T
Q  214 taacatattaac 225  Q
    ||||||||||||    
T  1390466 taacatattaac 1390455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 33236192 - 33236087
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    ||||| |||||||||| |||||| ||| |||| ||| ||||  | ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  33236192 ggtgtatttggatggagagtttatgagaggaaaggaggggagagattacttttcatttttaaattacggacactatgaaat-ttttttaaaaagttaaca 33236094  T
Q  219 tattaac 225  Q
    |||||||    
T  33236093 tattaac 33236087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 122 - 221
Target Start/End: Original strand, 19278039 - 19278138
Alignment:
Q  122 gtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatat 221  Q
    |||||||||||||  |||||||||||||||| | | ||  |||||||||||||||||||||||| || ||||| ||||||||||||||||||| ||||||    
T  19278039 gtgtttggatggagggtttaggaggggaaggaaggagagagtttacttttcatttttaaattactgacactataaaatattttttaaaaagttgacatat 19278138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 1300862 - 1300756
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    ||||||||||||||||  |||| | ||  ||| ||| ||||  ||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||    
T  1300862 ggtgtgtttggatggagggtttggaagatgaatggaggggagggtttacttttcatttttaaattacggacaatatgaaatattttataaaaagttaaca 1300763  T
Q  219 tattaac 225  Q
    |||||||    
T  1300762 tattaac 1300756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 120 - 225
Target Start/End: Original strand, 5585304 - 5585410
Alignment:
Q  120 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttactttt-catttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    |||||||||||||||  |||||||||||||||| |||| |  |||||||||| | ||||||||||||| | |||||||||| |||||||||||| |||||    
T  5585304 gtgtgtttggatggagggtttaggaggggaaggaatggaagagtttactttttcttttttaaattacgaacactatgaaatgttttttaaaaaggtaaca 5585403  T
Q  219 tattaac 225  Q
    |||||||    
T  5585404 tattaac 5585410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 114 - 225
Target Start/End: Complemental strand, 34176581 - 34176471
Alignment:
Q  114 tttatggtgtgtttggatggaaagtttaggagggga-agggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaag 212  Q
    |||||||||||||||||||||  ||||| ||||| | || |||| ||  ||||| ||||||||||||||||||||| |||||||||||||||||  ||||    
T  34176581 tttatggtgtgtttggatggagggtttatgagggaagagagatgaga--gtttagttttcatttttaaattacggacactatgaaatattttttttaaag 34176484  T
Q  213 ttaacatattaac 225  Q
    |||||||||||||    
T  34176483 ttaacatattaac 34176471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 21606889 - 21606952
Alignment:
Q  162 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    ||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||    
T  21606889 gtttacttttcatttttaaattacggaaactatgaaatgttttataaaaagttaacatattaac 21606952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 30487308 - 30487413
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    ||||||||||||||||  |||||||||||||||||| ||||  ||| |||||||||| |||||||| ||| | |||||||| | ||||||||||| ||||    
T  30487308 ggtgtgtttggatggagggtttaggaggggaagggaggggagggttcacttttcattgttaaatta-ggacagtatgaaatgtcttttaaaaagtcaaca 30487406  T
Q  219 tattaac 225  Q
    |||||||    
T  30487407 tattaac 30487413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 169 - 224
Target Start/End: Original strand, 10348850 - 10348905
Alignment:
Q  169 tttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaa 224  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  10348850 tttcatttttaaattacggataatatgaaatatcttttaaaaagttaacatattaa 10348905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 119 - 221
Target Start/End: Complemental strand, 14515713 - 14515611
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    ||||||||||||||||  |||||||||||||||| | ||||  |||||  |||||||||||||||| | | ||||| ||||||||||| || ||||||||    
T  14515713 ggtgtgtttggatggagggtttaggaggggaaggaaagggagggtttagatttcatttttaaattatgaacactataaaatattttttgaagagttaaca 14515614  T
Q  219 tat 221  Q
    |||    
T  14515613 tat 14515611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 4097559 - 4097620
Alignment:
Q  164 ttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    |||||||| |||||||||||||||| ||| |||||| |||||||||||||||||||||||||    
T  4097559 ttacttttaatttttaaattacggacactttgaaatgttttttaaaaagttaacatattaac 4097620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 188
Target Start/End: Original strand, 10818231 - 10818300
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 188  Q
    ||||||||||||| ||  |||||||||||||||||| |||| |||||| ||||| |||||||||||||||    
T  10818231 ggtgtgtttggattgagggtttaggaggggaagggaggggattgtttatttttcttttttaaattacgga 10818300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 26318546 - 26318477
Alignment:
Q  120 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggat 189  Q
    ||||||||||||||| |||||||||||| |||||| |||||  |||||||||| ||||||||||| ||||    
T  26318546 gtgtgtttggatggagagtttaggagggaaagggaggggaagatttacttttcttttttaaattatggat 26318477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 2900109 - 2900046
Alignment:
Q  162 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    |||||||||||||||||||||||  || |||||||||| |||| ||| ||||||||||||||||    
T  2900109 gtttacttttcatttttaaattatagacactatgaaatgttttataagaagttaacatattaac 2900046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 119 - 206
Target Start/End: Original strand, 16737998 - 16738085
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatttttt 206  Q
    ||||||||||||||||  ||||| ||| ||||| || |||||  |||||||||| ||||||||||| ||| |||||||||| ||||||    
T  16737998 ggtgtgtttggatggagggtttaagagaggaagagaggggaagatttacttttcgtttttaaattatggaaactatgaaatgtttttt 16738085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 225
Target Start/End: Complemental strand, 31849305 - 31849246
Alignment:
Q  166 acttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    ||||||||||||||||||||||| ||||| |||| | ||||||||| |||||||||||||    
T  31849305 acttttcatttttaaattacggacactataaaatgtcttttaaaaaattaacatattaac 31849246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 162 - 221
Target Start/End: Complemental strand, 9298685 - 9298625
Alignment:
Q  162 gtttacttttcatttttaaattacggatactatgaaat-attttttaaaaagttaacatat 221  Q
    |||||||||||| |||||||||||||| | ||||||||  |||||||||||||||||||||    
T  9298685 gtttacttttcaattttaaattacggacattatgaaatgtttttttaaaaagttaacatat 9298625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 188
Target Start/End: Complemental strand, 19278278 - 19278211
Alignment:
Q  120 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 188  Q
    |||||||||||| || ||||||||||||||||||| ||||  ||||| ||||| |||||||||||||||    
T  19278278 gtgtgtttggattgagagtttaggaggggaagggaggggagggttta-ttttcttttttaaattacgga 19278211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 665843 - 665949
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaa-gttaac 217  Q
    |||||||||||||| |  ||||||||||||||| || ||||  ||| | ||||||||||||||||| | ||| |||||||| | |||||||||  |||||    
T  665843 ggtgtgtttggatg-agggtttaggaggggaagtgaggggagggttcatttttcatttttaaattatgaatattatgaaatgtcttttaaaaattttaac 665941  T
Q  218 atattaac 225  Q
    ||||||||    
T  665942 atattaac 665949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 7775996 - 7776046
Alignment:
Q  166 acttttcatttttaaattacggatactatgaaatattttttaaaaagttaa 216  Q
    |||||||||||| |||||||| | ||||| |||||||||||||||||||||    
T  7775996 acttttcattttaaaattacgaacactataaaatattttttaaaaagttaa 7776046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 188
Target Start/End: Original strand, 14515475 - 14515544
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 188  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||||  ||||| |||||||||||||||    
T  14515475 ggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcttttttaaattacgga 14515544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 210
Target Start/End: Original strand, 30849960 - 30850007
Alignment:
Q  163 tttacttttcatttttaaattacggatactatgaaatattttttaaaa 210  Q
    ||||| |||| ||||||||||||| ||||||| |||||||||||||||    
T  30849960 tttacatttcgtttttaaattacgcatactataaaatattttttaaaa 30850007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 190
Target Start/End: Complemental strand, 23091195 - 23091129
Alignment:
Q  125 tttggatggaaagtttaggaggggaagggatgggaatgtttacttttc-atttttaaattacggata 190  Q
    ||||||||||  |||||||||||||||||| ||||  | |||||||||  |||||||||||||||||    
T  23091195 tttggatggagggtttaggaggggaagggaggggagggcttacttttctttttttaaattacggata 23091129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 31799120 - 31799070
Alignment:
Q  162 gtttacttttcatttttaaattacggatactatgaaat-attttttaaaaa 211  Q
    ||||||||||| ||||||||||||||||| ||| |||| ||||||||||||    
T  31799120 gtttacttttcttttttaaattacggatattataaaataattttttaaaaa 31799070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 185
Target Start/End: Complemental strand, 21607085 - 21607020
Alignment:
Q  120 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 185  Q
    |||||||||||| ||  ||||||||||||||| ||   |||||||||| |||| ||||||||||||    
T  21607085 gtgtgtttggattgagggtttaggaggggaagagagatgaatgtttacatttcgtttttaaattac 21607020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 223
Target Start/End: Complemental strand, 1395834 - 1395774
Alignment:
Q  163 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatta 223  Q
    |||||||||||||||||||||||  | ||| |  ||| ||||||||||| |||||||||||    
T  1395834 tttacttttcatttttaaattactaacactgtagaatgttttttaaaaaattaacatatta 1395774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 188
Target Start/End: Complemental strand, 4097754 - 4097686
Alignment:
Q  120 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 188  Q
    |||||||||||| ||  ||||| |||||||||||| || |  ||| ||||||| |||||||||||||||    
T  4097754 gtgtgtttggattgagggtttaagaggggaagggagggaagggttcacttttcttttttaaattacgga 4097686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 159
Target Start/End: Original strand, 23090997 - 23091037
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatggga 159  Q
    ||||||||||||| ||| |||||||||||||||||| ||||    
T  23090997 ggtgtgtttggattgaaggtttaggaggggaagggagggga 23091037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 3e-38; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 8530039 - 8529935
Alignment:
Q  121 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacata 220  Q
    |||||||||||| | ||||||||||||||||||| | ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8530039 tgtgtttggatgaagagtttaggaggggaagggaggtgaaagtttacttttcatttttaaattacggacactatgaaatattttttaaaaagttaacata 8529940  T
Q  221 ttaac 225  Q
    |||||    
T  8529939 ttaac 8529935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 114 - 225
Target Start/End: Complemental strand, 41498652 - 41498540
Alignment:
Q  114 tttatggtgtgtttggatggaaagtttaggagggg-aagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaag 212  Q
    |||| |||||||||||||||| ||||||||||||| |||||| ||||   |||||||||||||||||||||||||| |||||||||| |||| |||||||    
T  41498652 tttagggtgtgtttggatggagagtttaggaggggtaagggaggggaggatttacttttcatttttaaattacggacactatgaaatgttttataaaaag 41498553  T
Q  213 ttaacatattaac 225  Q
    |||||||||||||    
T  41498552 ttaacatattaac 41498540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 114 - 225
Target Start/End: Complemental strand, 12234257 - 12234146
Alignment:
Q  114 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 213  Q
    |||||||||||||||||||||  |||||||||||||||||| ||||  ||||| ||||||||||||||||||||| |||| ||||| ||||||| |||||    
T  12234257 tttatggtgtgtttggatggagggtttaggaggggaagggaggggagggtttagttttcatttttaaattacggacactacgaaatgttttttataaagt 12234158  T
Q  214 taacatattaac 225  Q
    || |||||||||    
T  12234157 tagcatattaac 12234146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 40094935 - 40095041
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    ||||||||||||||||  |||||||||||||||| | ||||  ||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||    
T  40094935 ggtgtgtttggatggagggtttaggaggggaaggaaggggagggtttacttttcatttttaaattacggacactatgaaatgttttataaaaagttaaca 40095034  T
Q  219 tattaac 225  Q
     ||||||    
T  40095035 aattaac 40095041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 30010574 - 30010468
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    ||||||||||||||||  |||||| ||||||||||| ||||  |||||||||||||||| |||||||||| |||| ||||| ||||||||| ||||||||    
T  30010574 ggtgtgtttggatggagggtttagaaggggaagggaggggagggtttacttttcattttgaaattacggacactacgaaatgttttttaaatagttaaca 30010475  T
Q  219 tattaac 225  Q
    |||||||    
T  30010474 tattaac 30010468  T

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Target: chr1; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 114 - 225
Target Start/End: Original strand, 38509891 - 38510002
Alignment:
Q  114 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 213  Q
    |||| ||||||||||||| ||  ||||||||||||||||||  |||  ||| ||||||||||||||||||||||| |||||||||| | ||||||||| |    
T  38509891 tttagggtgtgtttggatagagggtttaggaggggaagggagaggagggttcacttttcatttttaaattacggacactatgaaatgtcttttaaaaaat 38509990  T
Q  214 taacatattaac 225  Q
    |||||| |||||    
T  38509991 taacatcttaac 38510002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 119 - 220
Target Start/End: Original strand, 2858934 - 2859035
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    ||||||||||||||||  ||||||||||| |||||| ||||  ||||||||||||||| |||||||| ||  ||||||||| || |||||||||||||||    
T  2858934 ggtgtgtttggatggagggtttaggagggaaagggaggggagggtttacttttcatttctaaattacagaccctatgaaatgttatttaaaaagttaaca 2859033  T
Q  219 ta 220  Q
    ||    
T  2859034 ta 2859035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 114 - 225
Target Start/End: Original strand, 43551993 - 43552100
Alignment:
Q  114 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 213  Q
    |||| ||||||||||||||||| ||||||| || ||| ||||| ||  ||||| |||||||||||||||||||     |||||||| |||||||||||||    
T  43551993 tttagggtgtgtttggatggaaggtttaggcggcgaaaggatgtgagggtttatttttcatttttaaattacg----ttatgaaatgttttttaaaaagt 43552088  T
Q  214 taacatattaac 225  Q
    ||||||||||||    
T  43552089 taacatattaac 43552100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 120 - 225
Target Start/End: Complemental strand, 7444736 - 7444631
Alignment:
Q  120 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 219  Q
    ||||||||||||| | ||||||| | |||||| || ||||  ||||| |||||||||| |||||||||| ||||| ||||  ||||||||||||||||||    
T  7444736 gtgtgtttggatgaagagtttagaaagggaagagaggggagggtttagttttcattttaaaattacggacactataaaatgatttttaaaaagttaacat 7444637  T
Q  220 attaac 225  Q
    ||||||    
T  7444636 attaac 7444631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 35349468 - 35349570
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    ||||||||||||||||  ||||| ||||||| |||  ||||  ||||||||||||||||||||||||||| ||  |||||| |||| |||||||||||||    
T  35349468 ggtgtgtttggatggagggtttaagaggggagggg--gggagggtttacttttcatttttaaattacggacac--tgaaatgttttataaaaagttaaca 35349563  T
Q  219 tattaac 225  Q
    |||||||    
T  35349564 tattaac 35349570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 120 - 225
Target Start/End: Original strand, 20576136 - 20576239
Alignment:
Q  120 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 219  Q
    |||||||||||| ||  |||||||||||||||||| ||||  |||||  |||||||||||||||||||| ||  |||||| ||||||||| |||||| ||    
T  20576136 gtgtgtttggatagagggtttaggaggggaagggaggggagagtttagatttcatttttaaattacggacac--tgaaatgttttttaaagagttaatat 20576233  T
Q  220 attaac 225  Q
    ||||||    
T  20576234 attaac 20576239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 32951366 - 32951426
Alignment:
Q  165 tacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    |||||||||||||||||||||||| || ||||||| |||| ||||||||||||||||||||    
T  32951366 tacttttcatttttaaattacggacacaatgaaatgttttataaaaagttaacatattaac 32951426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 188
Target Start/End: Complemental strand, 32951566 - 32951491
Alignment:
Q  113 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 188  Q
    ||||| ||||||||||||| || |||||||||| |||||||| ||||  ||||||||||| |||||||||||||||    
T  32951566 ttttagggtgtgtttggattgagagtttaggagaggaagggaggggagagtttacttttcgtttttaaattacgga 32951491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 36285619 - 36285682
Alignment:
Q  162 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    ||||| || |||||||||||||||| | ||||| ||||||||||||||||||||||||||||||    
T  36285619 gtttatttatcatttttaaattacgaacactataaaatattttttaaaaagttaacatattaac 36285682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 49946633 - 49946696
Alignment:
Q  162 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    ||||| || |||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||    
T  49946633 gtttatttgtcatttttaaattacggacactataaaatatttttttaaaagttaacatattaac 49946696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 113 - 225
Target Start/End: Complemental strand, 28770969 - 28770859
Alignment:
Q  113 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaag 212  Q
    ||||| ||||||||||||||||| ||||||||||| || |||  |||  ||||| |||| |||||||||||||  | | |||||||| |||| ||||||     
T  28770969 ttttagggtgtgtttggatggaaggtttaggagggaaaaggagtggagggtttattttttatttttaaattac--acattatgaaatgttttataaaaaa 28770872  T
Q  213 ttaacatattaac 225  Q
    |||||||||||||    
T  28770871 ttaacatattaac 28770859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 50744332 - 50744389
Alignment:
Q  169 tttcatttttaaattacggatactatgaaat-attttttaaaaagttaacatattaac 225  Q
    |||||||||||||||||||| ||||||||||  ||||||||| |||||||||||||||    
T  50744332 tttcatttttaaattacggacactatgaaatgtttttttaaagagttaacatattaac 50744389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 51597866 - 51597805
Alignment:
Q  163 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaa 224  Q
    ||||||||||| |||||||||| | | ||||||||||  |||||||||||||||||||||||    
T  51597866 tttacttttcaattttaaattatgaacactatgaaatggtttttaaaaagttaacatattaa 51597805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 188
Target Start/End: Complemental strand, 2859169 - 2859105
Alignment:
Q  124 gtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 188  Q
    |||||||| ||| |||||||||||||||||| ||||  ||||||||||  |||||||||||||||    
T  2859169 gtttggattgaaggtttaggaggggaagggaggggagggtttacttttattttttaaattacgga 2859105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 40964798 - 40964734
Alignment:
Q  162 gtttacttttcatttttaaattacggatactatgaaatatt-ttttaaaaagttaacatattaac 225  Q
    ||||||||||||||||||||||||||| ||  | ||||||| |||| ||||||||||||||||||    
T  40964798 gtttacttttcatttttaaattacggacaccgtcaaatattttttttaaaagttaacatattaac 40964734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 6563775 - 6563712
Alignment:
Q  162 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    |||||||||||||||||||||   ||| |||||||| |||||||||| ||||||| ||||||||    
T  6563775 gtttacttttcatttttaaatcgaggacactatgaactattttttaagaagttaatatattaac 6563712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 181
Target Start/End: Original strand, 23536777 - 23536844
Alignment:
Q  114 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaa 181  Q
    |||||||||||||||||||||   ||||||||| |||||||||||| |||||| |||||  |||||||    
T  23536777 tttatggtgtgtttggatggaggatttaggaggagaagggatgggagtgtttaattttctattttaaa 23536844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 188
Target Start/End: Complemental strand, 35349709 - 35349635
Alignment:
Q  114 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 188  Q
    |||| |||||||||||||  |  ||||| |||||||||||| ||||  ||||||||||| |||||||||||||||    
T  35349709 tttagggtgtgtttggattaagggtttatgaggggaagggaggggagggtttacttttcgtttttaaattacgga 35349635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 45585739 - 45585793
Alignment:
Q  171 tcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    ||||||||||||||  |||||||| |||| |||||| ||||||||||||||||||    
T  45585739 tcatttttaaattatagatactataaaatgtttttttaaaagttaacatattaac 45585793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 225
Target Start/End: Original strand, 26940874 - 26940951
Alignment:
Q  148 gaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    |||| |||||||  ||| |||||| ||||||||||||  || |||||||||||||| || |||||||||| |||||||    
T  26940874 gaagagatgggagggttcactttttatttttaaattatagacactatgaaatatttgtttaaaagttaacttattaac 26940951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 188
Target Start/End: Original strand, 30010334 - 30010403
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 188  Q
    ||||||||||||| ||  |||||||||||||||||| ||||   |||||||||| | |||||||||||||    
T  30010334 ggtgtgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttgtttaaattacgga 30010403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 184
Target Start/End: Original strand, 41498406 - 41498471
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 184  Q
    ||||||||||||| ||  ||||||||||||||| || ||||  ||||||||||| |||||||||||    
T  41498406 ggtgtgtttggattgagggtttaggaggggaagtgaggggagggtttacttttcgtttttaaatta 41498471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 206
Target Start/End: Original strand, 2470727 - 2470819
Alignment:
Q  114 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatttttt 206  Q
    |||| ||||||||||||||||  ||||||||||||||| ||  |||  ||||  ||| ||||||||||||||| | ||||| |||| ||||||    
T  2470727 tttagggtgtgtttggatggagggtttaggaggggaagagaatggagggtttcgtttacatttttaaattacgaacactataaaatgtttttt 2470819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 211
Target Start/End: Complemental strand, 2506781 - 2506689
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaa 211  Q
    |||||||||||||||| ||||||| || |||||||| | ||    ||| ||||| |||||||||||| |||| ||| ||||| ||||||||||    
T  2506781 ggtgtgtttggatggagagtttagaagaggaagggaggagatgacttagttttcttttttaaattacagatattataaaataatttttaaaaa 2506689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 41676480 - 41676436
Alignment:
Q  162 gtttacttttcatttttaaattacggatactatgaaatatttttt 206  Q
    ||||||||||||||||||||||||||| ||||| |||| ||||||    
T  41676480 gtttacttttcatttttaaattacggacactataaaatgtttttt 41676436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 184
Target Start/End: Complemental strand, 35513037 - 35512974
Alignment:
Q  121 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 184  Q
    ||||||||||||||  |||||||||||||||||| ||||  | ||||||||  |||||||||||    
T  35513037 tgtgtttggatggagggtttaggaggggaagggaggggagggcttacttttattttttaaatta 35512974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 188
Target Start/End: Original strand, 10391893 - 10391943
Alignment:
Q  138 tttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 188  Q
    |||||||||||||  || ||||  |||||||||||||||||||||||||||    
T  10391893 tttaggaggggaaacgaggggagggtttacttttcatttttaaattacgga 10391943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 188
Target Start/End: Original strand, 12233999 - 12234081
Alignment:
Q  106 atggttgttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 188  Q
    |||||| ||| | ||||||||||||| ||  |||||||||||||||||| || |  | ||| ||||| |||||||||||||||    
T  12233999 atggttttttaagggtgtgtttggattgagggtttaggaggggaagggagggtagggcttaattttcttttttaaattacgga 12234081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 168
Target Start/End: Complemental strand, 20607459 - 20607410
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttact 168  Q
    ||||||||||||||||  |||||||||||||||||| ||||  |||||||    
T  20607459 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtttact 20607410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 188
Target Start/End: Complemental strand, 25268510 - 25268437
Alignment:
Q  115 ttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 188  Q
    ||||||| | ||||||||||  |||||| |||||||| || ||||  ||||||||| | |||||||||||||||    
T  25268510 ttatggtatatttggatggagggtttagaaggggaagtgaggggagggtttactttccttttttaaattacgga 25268437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 40709294 - 40709391
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaa 216  Q
    |||||||||||||  || ||||| ||||||||||||  |||    ||||||||| ||||||||||||| ||| ||| ||||| |||||| ||| ||||    
T  40709294 ggtgtgtttggatttaaggtttaagaggggaagggagaggaggacttacttttcttttttaaattacgaatattataaaataatttttagaaaattaa 40709391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 188
Target Start/End: Original strand, 7444481 - 7444549
Alignment:
Q  120 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 188  Q
    ||||||| |||| ||  |||| ||||| ||||||| ||||  ||||||||||| |||||||||||||||    
T  7444481 gtgtgttaggattgagggtttgggaggagaagggaagggagggtttacttttcttttttaaattacgga 7444549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 10392072 - 10392008
Alignment:
Q  162 gtttacttttcatttttaaattacggatactatgaaat-attttttaaaaagttaacatattaac 225  Q
    ||||||||||| ||||||||||||  | | ||| ||||  |||||||||||||||||||||||||    
T  10392072 gtttacttttcgtttttaaattacaaacattattaaatgtttttttaaaaagttaacatattaac 10392008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 188
Target Start/End: Complemental strand, 38510135 - 38510067
Alignment:
Q  120 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 188  Q
    ||||||||||||  |  |||||||||||||||||| ||||  ||||| ||||| |||||||| ||||||    
T  38510135 gtgtgtttggattaagggtttaggaggggaagggaggggagggtttagttttcttttttaaactacgga 38510067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 1e-37; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 114 - 225
Target Start/End: Original strand, 41110318 - 41110429
Alignment:
Q  114 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 213  Q
    |||||||||||||||||||||   ||||||||||||||||| | ||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  41110318 tttatggtgtgtttggatggaggatttaggaggggaagggaggagaaggtttacttttcatttttaaattacggacactatgaaatattttataaaaagt 41110417  T
Q  214 taacatattaac 225  Q
    ||||||||||||    
T  41110418 taacatattaac 41110429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 24560459 - 24560353
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    ||||||||||||||||  |||||||||||||| ||||||||  |||||||||||||||||||||||| || |||||||||| ||||||||||||||||||    
T  24560459 ggtgtgtttggatggagggtttaggaggggaacggatgggagagtttacttttcatttttaaattaccgacactatgaaatgttttttaaaaagttaaca 24560360  T
Q  219 tattaac 225  Q
    |||||||    
T  24560359 tattaac 24560353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 137 - 224
Target Start/End: Complemental strand, 52474139 - 52474052
Alignment:
Q  137 gtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaa 224  Q
    ||||||||||||||||||  |||  |||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  52474139 gtttaggaggggaagggagaggagggtttactttttatttttaaattacggatcctatgaaatattttgtaaaaagttaacatattaa 52474052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 120 - 222
Target Start/End: Original strand, 28581189 - 28581291
Alignment:
Q  120 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 219  Q
    |||||||||||||||  |||||| || |||||||| ||||  ||||| |||||||||||||||||| |||| | ||||||||||||||||||||||||||    
T  28581189 gtgtgtttggatggagggtttagaagaggaagggaggggagggtttagttttcatttttaaattacagatattgtgaaatattttttaaaaagttaacat 28581288  T
Q  220 att 222  Q
    |||    
T  28581289 att 28581291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 114 - 225
Target Start/End: Original strand, 18654597 - 18654708
Alignment:
Q  114 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 213  Q
    |||| ||||||||||||||||  ||||||||||| ||| |||||||  |||||  ||||||||||||||||||||  |||| ||||||||||| || |||    
T  18654597 tttagggtgtgtttggatggagggtttaggagggaaagagatgggagggtttagatttcatttttaaattacggaccctataaaatattttttgaagagt 18654696  T
Q  214 taacatattaac 225  Q
    ||||||||||||    
T  18654697 taacatattaac 18654708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 114 - 225
Target Start/End: Original strand, 41039947 - 41040058
Alignment:
Q  114 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 213  Q
    |||| ||||||||||||||||| ||||||||||||||| ||  | |   |||| |||||| ||||||||||| || ||||||||||||||| ||||||||    
T  41039947 tttagggtgtgtttggatggaaggtttaggaggggaagagagcgtaggctttaattttcaattttaaattacagacactatgaaatattttataaaaagt 41040046  T
Q  214 taacatattaac 225  Q
    ||||||||||||    
T  41040047 taacatattaac 41040058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 37102194 - 37102257
Alignment:
Q  162 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    ||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  37102194 gtttagttttcatttttaaattacggacactatgaaatgttttttaaaaagttaacatattaac 37102257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 36568906 - 36569011
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    ||||||||||||||||  ||||||||| |||| ||| ||||  ||||| |||||||||||||||| || | |||||||||| ||||| ||||||||||||    
T  36568906 ggtgtgtttggatggagggtttaggagtggaatggaggggagagttta-ttttcatttttaaatttcgaacactatgaaatgtttttcaaaaagttaaca 36569004  T
Q  219 tattaac 225  Q
    |||||||    
T  36569005 tattaac 36569011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 136 - 225
Target Start/End: Complemental strand, 46556369 - 46556281
Alignment:
Q  136 agtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    |||||||||| |||| ||| ||||  ||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||| ||||||||    
T  46556369 agtttaggagaggaatggaggggag-gtttacttttcatttttcaattacggacactatgacatattttttaaaaagttaagatattaac 46556281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 220442 - 220505
Alignment:
Q  162 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    ||||| ||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||    
T  220442 gtttagttttcatttttaaattacggacattatgaaatgttttttaaaaagttaacatattaac 220505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 30200133 - 30200196
Alignment:
Q  162 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    ||||| ||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||    
T  30200133 gtttagttttcatttttaaattacggacactatgaaatgttttttaaaaagtttacatattaac 30200196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 138 - 224
Target Start/End: Original strand, 25654991 - 25655077
Alignment:
Q  138 tttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaa 224  Q
    ||||||||||||||||| ||||  |||||||||||||||||| |||||| | |||| ||||| |||||| || ||||||||||||||    
T  25654991 tttaggaggggaagggaggggagggtttacttttcatttttatattacgaacactaagaaatgttttttgaagagttaacatattaa 25655077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 9312522 - 9312579
Alignment:
Q  168 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    |||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||    
T  9312522 ttttcatttttaaattacagacactatgaaatattttgtaaaaagttaacatattaac 9312579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 37807321 - 37807216
Alignment:
Q  121 tgtgtttggatggaaagtttaggagggg-aagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 219  Q
    |||||||| |||||  |||||||||||| ||| || |  |||||||||||||| ||||||||||  ||| |||||||||| |||||||||||||||| ||    
T  37807321 tgtgtttgaatggagggtttaggagggggaagagaggacaatgtttacttttcgtttttaaattttggacactatgaaatgttttttaaaaagttaatat 37807222  T
Q  220 attaac 225  Q
    ||||||    
T  37807221 attaac 37807216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 16275707 - 16275813
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    ||||||||||||||||  |||||  |||| |||||| ||||  ||| ||| |||||||||||||| |||| | |||||||| |||| ||||||||||||     
T  16275707 ggtgtgtttggatggatggtttataagggaaagggaggggagagttcactattcatttttaaatttcggacattatgaaatgttttataaaaagttaact 16275806  T
Q  219 tattaac 225  Q
    |||||||    
T  16275807 tattaac 16275813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 188
Target Start/End: Complemental strand, 34641232 - 34641163
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 188  Q
    ||||||||||||||||  |||||||||||||||||| ||||  | ||||||||| |||||||||||||||    
T  34641232 ggtgtgtttggatggagggtttaggaggggaagggaggggagggcttacttttcttttttaaattacgga 34641163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 162 - 222
Target Start/End: Complemental strand, 21773981 - 21773921
Alignment:
Q  162 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatt 222  Q
    |||||||||| |||||||||||||| | |||| ||||| ||||||||||||||||||||||    
T  21773981 gtttactttttatttttaaattacgaacactaggaaatgttttttaaaaagttaacatatt 21773921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 225
Target Start/End: Original strand, 27541937 - 27542039
Alignment:
Q  123 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatt 222  Q
    ||||||||| ||  |||||||||||||||||| | ||  ||| || ||||||||||||||||  || ||||||||||| || |||||||  |||||||||    
T  27541937 tgtttggattgagggtttaggaggggaagggaggagatggttcacatttcatttttaaattagagacactatgaaatacttgttaaaaatctaacatatt 27542036  T
Q  223 aac 225  Q
    |||    
T  27542037 aac 27542039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 10748299 - 10748398
Alignment:
Q  121 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacata 220  Q
    ||||||||||||||  ||||||||||||||||||   ||  ||||||     |||||||||||||||  | ||| |||| ||||||||||||||||||||    
T  10748299 tgtgtttggatggagggtttaggaggggaagggagaagagagtttac-----atttttaaattacgggcattataaaatgttttttaaaaagttaacata 10748393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 211
Target Start/End: Original strand, 17474209 - 17474301
Alignment:
Q  120 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaat-attttttaaaaa 211  Q
    |||||||||||| ||  ||||||||||| |||  |||| || ||||||||||| ||||||||||||||| | ||| |||| ||||||||||||    
T  17474209 gtgtgtttggattgagggtttaggagggaaagtaatggaaaagtttacttttcttttttaaattacggacattataaaataattttttaaaaa 17474301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 188
Target Start/End: Complemental strand, 24253970 - 24253895
Alignment:
Q  113 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatg-tttacttttcatttttaaattacgga 188  Q
    ||||| ||||||||||||||||  |||||| ||||||||||| ||||| | |||||||||| |||||||||||||||    
T  24253970 ttttagggtgtgtttggatggagggtttagaaggggaaggga-gggaaggatttacttttcttttttaaattacgga 24253895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 206
Target Start/End: Complemental strand, 26136044 - 26135952
Alignment:
Q  114 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatttttt 206  Q
    |||| |||||| ||| |||||  ||||||||||||||||||  |||  ||||||||||| ||||||||||||||| | ||| ||||| |||||    
T  26136044 tttaaggtgtgattgaatggagggtttaggaggggaagggagtggagggtttacttttcttttttaaattacggacattataaaataattttt 26135952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 185
Target Start/End: Original strand, 14897981 - 14898044
Alignment:
Q  122 gtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 185  Q
    |||||||||| || |||||||||||||||||||  ||||  |||||||||| ||||||||||||    
T  14897981 gtgtttggattgagagtttaggaggggaagggagaggaaattttacttttcttttttaaattac 14898044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 188
Target Start/End: Complemental strand, 220644 - 220570
Alignment:
Q  114 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 188  Q
    |||| ||| ||||||||||||  |||||||||| ||||||| ||||   |||||||||| |||||||||||||||    
T  220644 tttagggtctgtttggatggagggtttaggaggagaagggaggggagaatttacttttcttttttaaattacgga 220570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 17474446 - 17474356
Alignment:
Q  121 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaa 211  Q
    ||||||||||| ||  ||| |||||||||||||| ||||  ||| ||||||  ||||||||||||| ||| | | ||||||||||||||||    
T  17474446 tgtgtttggattgagggttgaggaggggaagggaggggagagttaacttttattttttaaattacgaataatgtaaaatattttttaaaaa 17474356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 188
Target Start/End: Complemental strand, 28582732 - 28582682
Alignment:
Q  138 tttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 188  Q
    ||||||||||||||||| ||||  ||||||||||| |||||||||||||||    
T  28582732 tttaggaggggaagggaggggagggtttacttttcttttttaaattacgga 28582682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 188
Target Start/End: Complemental strand, 41110563 - 41110494
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 188  Q
    ||||||||||||| ||  ||||  ||||||||||||  |||| ||||||||||| |||||||||||||||    
T  41110563 ggtgtgtttggattgagggtttgtgaggggaagggagaggaaggtttacttttcgtttttaaattacgga 41110494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 43005804 - 43005846
Alignment:
Q  180 aattacggatactatgaaatattttttaaaaagttaacatattaa 224  Q
    ||||||||||  |||||||||||||||||||||||||||||||||    
T  43005804 aattacggat--tatgaaatattttttaaaaagttaacatattaa 43005846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 206
Target Start/End: Original strand, 13082856 - 13082943
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatttttt 206  Q
    ||||||||||||||||  |||||| || | ||| ||  |||| ||||| |||| ||||||||| |||||| |||||||||| ||||||    
T  13082856 ggtgtgtttggatggagggtttagaagagaaagagagaggaaggtttaatttttatttttaaaatacggacactatgaaatgtttttt 13082943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 188
Target Start/End: Complemental strand, 55428619 - 55428552
Alignment:
Q  121 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 188  Q
    ||||||||||| ||  |||||||||||||||||| ||||   |||||||||| | |||||||||||||    
T  55428619 tgtgtttggattgagggtttaggaggggaagggaggggatgatttacttttcttctttaaattacgga 55428552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 201
Target Start/End: Complemental strand, 23028168 - 23028086
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatat 201  Q
    ||||||||||||||||  |||| |||||||||  || || |    |||||||| |||||||||||||||| ||||||||||||    
T  23028168 ggtgtgtttggatggagggtttgggaggggaaaagagggcaggacttactttttatttttaaattacggacactatgaaatat 23028086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 210
Target Start/End: Original strand, 40463874 - 40463964
Alignment:
Q  120 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaa 210  Q
    ||||||||||||| |  ||||| ||||  ||  |||| || ||| |||||||||||||||||||||||| ||||| || | ||||||||||    
T  40463874 gtgtgtttggatgaagggtttatgaggataaacgatgagagtgtgtacttttcatttttaaattacggacactataaattgttttttaaaa 40463964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 52185207 - 52185152
Alignment:
Q  168 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    |||| |||||||||||| ||| ||||  ||||||||| ||||||||||||||||||||    
T  52185207 tttttatttttaaattatggacacta--aaatattttataaaaagttaacatattaac 52185152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 185
Target Start/End: Complemental strand, 6803442 - 6803377
Alignment:
Q  120 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 185  Q
    |||||||||||| ||| ||||||||||||||| || | ||  ||||| ||||| ||||||||||||    
T  6803442 gtgtgtttggattgaaggtttaggaggggaagagaggagagagtttaattttcttttttaaattac 6803377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 21773788 - 21773853
Alignment:
Q  123 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 188  Q
    ||||||||| ||| |||||||||||||||||| || |  || |||||||| ||| |||||||||||    
T  21773788 tgtttggattgaaggtttaggaggggaagggaaggaagggtatacttttcttttctaaattacgga 21773853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 188
Target Start/End: Original strand, 24560219 - 24560288
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 188  Q
    |||||||||||||  |  |||||||||||||||||| ||||  ||||  ||||| |||||||||||||||    
T  24560219 ggtgtgtttggattaagggtttaggaggggaagggaggggagggtttgtttttcttttttaaattacgga 24560288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 55327563 - 55327506
Alignment:
Q  168 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    ||||| ||||||||| ||||| | |||||||| ||||||||||||||| | |||||||    
T  55327563 ttttcgtttttaaatcacggacattatgaaatgttttttaaaaagttagcgtattaac 55327506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 188
Target Start/End: Complemental strand, 30200312 - 30200264
Alignment:
Q  140 taggaggggaagggatgggaatgtttacttttcatttttaaattacgga 188  Q
    ||||||||||||||| || |  ||||||||||| |||||||||||||||    
T  30200312 taggaggggaagggagggaagggtttacttttcttttttaaattacgga 30200264  T

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Target: chr8 (Bit Score: 71; Significance: 3e-32; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 34634385 - 34634279
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    |||||||||||||||| ||||||||||||||||||||| ||  ||| | |||| |||||||||||||||| |||||||||||| ||||||||||||||||    
T  34634385 ggtgtgtttggatggagagtttaggaggggaagggatgtgagggttcattttttatttttaaattacggacactatgaaatatcttttaaaaagttaaca 34634286  T
Q  219 tattaac 225  Q
    |||||||    
T  34634285 tattaac 34634279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 123 - 225
Target Start/End: Original strand, 31543078 - 31543180
Alignment:
Q  123 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatt 222  Q
    ||||||||||||  ||||| |||||||||||| ||||  ||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||    
T  31543078 tgtttggatggagggtttaagaggggaagggaggggagggtttacttttcatttttaaattacggaaactatgaaatgtttttaaaaaagttaacatatt 31543177  T
Q  223 aac 225  Q
    |||    
T  31543178 aac 31543180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 11785768 - 11785662
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    ||||||||||||||||  ||||||||||| ||| || ||||  ||||  ||||||||||||||||||||| | |||||||||||||||||||||||| ||    
T  11785768 ggtgtgtttggatggagggtttaggagggtaagagaagggagggtttgattttcatttttaaattacggacattatgaaatattttttaaaaagttagca 11785669  T
Q  219 tattaac 225  Q
    |||||||    
T  11785668 tattaac 11785662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 125 - 225
Target Start/End: Original strand, 11575415 - 11575514
Alignment:
Q  125 tttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaa 224  Q
    ||||||||||   |||||||| |||||||| ||||  |||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  11575415 tttggatggaggatttaggagaggaaggga-gggagggtttacttttcattcttaaattaaggatactatgaaatgttttttaaaaagttaacatattaa 11575513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 1281341 - 1281279
Alignment:
Q  163 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  1281341 tttagttttcatttttaaattacggacactatgaaatattttttaaaaagttaacatattaac 1281279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 113 - 219
Target Start/End: Original strand, 3726859 - 3726965
Alignment:
Q  113 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaag 212  Q
    ||||| ||||||||||||||||  ||||||||||||||||||  |||  ||||| ||||||||||||||||||||| || ||| ||| ||||||||| ||    
T  3726859 ttttagggtgtgtttggatggagggtttaggaggggaagggaaaggacggtttatttttcatttttaaattacggacaccatggaatgttttttaaatag 3726958  T
Q  213 ttaacat 219  Q
    |||||||    
T  3726959 ttaacat 3726965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 31738665 - 31738559
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    ||||||||||||||||  |||||||||||||||  | ||||  |||||  |||||||||||||||||||| ||||| ||||||||||| || ||||||||    
T  31738665 ggtgtgtttggatggagggtttaggaggggaagaaaggggagggtttaaatttcatttttaaattacggacactataaaatattttttgaagagttaaca 31738566  T
Q  219 tattaac 225  Q
    |||||||    
T  31738565 tattaac 31738559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 120 - 225
Target Start/End: Complemental strand, 16653190 - 16653085
Alignment:
Q  120 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 219  Q
    ||||||||||||| |  ||||| |||||||||||| | ||  ||||| ||||||||||||||||||||| | |||||||| ||||| |||||||||||||    
T  16653190 gtgtgtttggatgaatggtttaagaggggaagggaggagagggtttaattttcatttttaaattacggacattatgaaatgtttttgaaaaagttaacat 16653091  T
Q  220 attaac 225  Q
    ||||||    
T  16653090 attaac 16653085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 121 - 224
Target Start/End: Original strand, 30479721 - 30479824
Alignment:
Q  121 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacata 220  Q
    ||||||||||||||   ||||||||||| | ||| ||||  ||| |||||||||||||||||||| || |||||||||| | ||||||||||||||||||    
T  30479721 tgtgtttggatggaggatttaggagggggatggaggggagagttcacttttcatttttaaattacagacactatgaaatgtcttttaaaaagttaacata 30479820  T
Q  221 ttaa 224  Q
    ||||    
T  30479821 ttaa 30479824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 123 - 225
Target Start/End: Complemental strand, 36309081 - 36308979
Alignment:
Q  123 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatt 222  Q
    ||||||||||||  |||||||||||||||||| ||||  ||||||||||||| ||||||||||| | | | |||||||| |||| |||||| ||||||||    
T  36309081 tgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatctttaaattacgtacattgtgaaatatatttttaaaagtaaacatatt 36308982  T
Q  223 aac 225  Q
    |||    
T  36308981 aac 36308979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 120 - 225
Target Start/End: Original strand, 29690925 - 29691030
Alignment:
Q  120 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 219  Q
    ||||||||||||| |||||||||||||  ||| || | ||  ||||||||||||||| |||  ||| ||||||| ||||||||||| |||||||||||||    
T  29690925 gtgtgtttggatgaaaagtttaggaggaaaagagacgagagagtttacttttcatttataacatactgatactaggaaatatttttaaaaaagttaacat 29691024  T
Q  220 attaac 225  Q
    ||||||    
T  29691025 attaac 29691030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 1026894 - 1026957
Alignment:
Q  162 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    |||||||||||||||||||||| |||| ||||||||||||||| | ||||||||||||||||||    
T  1026894 gtttacttttcatttttaaattgcggacactatgaaatattttatcaaaagttaacatattaac 1026957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 147 - 225
Target Start/End: Complemental strand, 2248666 - 2248588
Alignment:
Q  147 ggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    |||||||| ||||  ||| |||||| |||||||||||||||| ||||||||||||||||| |||||||||| |||||||    
T  2248666 ggaagggaggggagggttcactttttatttttaaattacggacactatgaaatatttttttaaaagttaacttattaac 2248588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 119 - 188
Target Start/End: Complemental strand, 43732929 - 43732860
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 188  Q
    ||||||||||||||||  |||||||||||||||||| ||||  ||||||||||| |||||||||||||||    
T  43732929 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtttacttttcttttttaaattacgga 43732860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 224
Target Start/End: Complemental strand, 10028347 - 10028259
Alignment:
Q  137 gtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatt-ttttaaaaagttaacatattaa 224  Q
    ||||||||| ||||| || ||||  |||||||||| | |||||||||||||| ||||||||||||| |||| |||||||||||||||||    
T  10028347 gtttaggagaggaagtgaggggagggtttactttttacttttaaattacggacactatgaaatattttttttaaaagttaacatattaa 10028259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 156 - 224
Target Start/End: Complemental strand, 30664566 - 30664498
Alignment:
Q  156 gggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaa 224  Q
    ||||||||||| |||||| |||||||||||||| | ||  |||||||||||||||||||||||||||||    
T  30664566 gggaatgtttatttttcagttttaaattacggacattacaaaatattttttaaaaagttaacatattaa 30664498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 29358385 - 29358447
Alignment:
Q  162 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    |||||||||| |||||||||||||||| ||||| |||||||||||||||| |||||||||||||    
T  29358385 gtttactttttatttttaaattacggacactataaaatattttttaaaaa-ttaacatattaac 29358447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 9718530 - 9718587
Alignment:
Q  168 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||||| |||||||||    
T  9718530 ttttcatttttaaattacggacactatgaaatggtttttaaaaagttagcatattaac 9718587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 37923123 - 37923186
Alignment:
Q  162 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    ||||||||||||||||||||||| | | |||||||||| ||||||||| |||||| ||||||||    
T  37923123 gtttacttttcatttttaaattatgaacactatgaaatgttttttaaagagttaaaatattaac 37923186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 6315255 - 6315197
Alignment:
Q  168 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaact 226  Q
    |||||||||||||| |||||| |||||||||| ||||| ||||| ||||||||||||||    
T  6315255 ttttcatttttaaaatacggacactatgaaatgtttttaaaaaaattaacatattaact 6315197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 184
Target Start/End: Complemental strand, 9718730 - 9718656
Alignment:
Q  110 ttgttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 184  Q
    |||||| | ||||||||||||| ||  |||||||||| ||||||| ||||| ||||||||||| |||||||||||    
T  9718730 ttgtttcagggtgtgtttggattgagggtttaggaggagaagggaggggaaagtttacttttcttttttaaatta 9718656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 225
Target Start/End: Complemental strand, 11033659 - 11033553
Alignment:
Q  120 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaat-attttttaaaaagttaaca 218  Q
    |||| ||| ||||||  |||||||||| ||||||| | |||  ||||||||||| |||||||||| | ||| ||||||||  ||||||||||| ||||||    
T  11033659 gtgtctttagatggagggtttaggaggagaagggaggagaagatttacttttcaattttaaattatgaatattatgaaatgtttttttaaaaaattaaca 11033560  T
Q  219 tattaac 225  Q
    |||||||    
T  11033559 tattaac 11033553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 1281149 - 1281214
Alignment:
Q  123 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 188  Q
    ||||||||| ||  |||||||||||||||||||| ||  ||||||||||| |||||||||||||||    
T  1281149 tgtttggattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaattacgga 1281214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 188
Target Start/End: Complemental strand, 16024394 - 16024327
Alignment:
Q  120 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 188  Q
    |||||||||||||||   ||||||||||||||||| ||||  ||||||||||| |||||||||||||||    
T  16024394 gtgtgtttggatggaggatttaggaggggaagggaggggagagtttacttttc-tttttaaattacgga 16024327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 7502999 - 7503062
Alignment:
Q  162 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    |||| |||| ||||||||||||||  | |||||||||| |||| ||||||||||||||||||||    
T  7502999 gtttgctttccatttttaaattaccaaaactatgaaatgttttataaaaagttaacatattaac 7503062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 28083934 - 28083884
Alignment:
Q  169 tttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 219  Q
    |||| ||||||||||||||||||||||| || ||||||||| |||||||||    
T  28083934 tttcttttttaaattacggatactatgatatgttttttaaagagttaacat 28083884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 184
Target Start/End: Complemental strand, 31543319 - 31543249
Alignment:
Q  114 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 184  Q
    |||| ||||||||| ||| ||  |||||||||||||||||| ||||  ||||||||||| |||||||||||    
T  31543319 tttagggtgtgtttcgattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaatta 31543249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 190 - 224
Target Start/End: Original strand, 35694828 - 35694862
Alignment:
Q  190 actatgaaatattttttaaaaagttaacatattaa 224  Q
    |||||||||||||||||||||||||||||||||||    
T  35694828 actatgaaatattttttaaaaagttaacatattaa 35694862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 223
Target Start/End: Original strand, 4247563 - 4247623
Alignment:
Q  162 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatta 223  Q
    |||||||||| |||||||||||||||  ||| | ||||||||||||| ||||||||||||||    
T  4247563 gtttactttttatttttaaattacggc-actttaaaatattttttaagaagttaacatatta 4247623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 2248454 - 2248522
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgg 187  Q
    ||||||||||||| || ||||||||||||||||||| ||||  ||| | ||| | ||||||||||||||    
T  2248454 ggtgtgtttggattgagagtttaggaggggaagggaggggagagttcaatttccttttttaaattacgg 2248522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 225
Target Start/End: Complemental strand, 7979340 - 7979276
Alignment:
Q  161 tgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    |||||||||||||||||||||||||||| ||  |||||| ||| ||||||  ||||| |||||||    
T  7979340 tgtttacttttcatttttaaattacggacaccgtgaaatgtttattaaaagtttaacttattaac 7979276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 8815383 - 8815316
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacg 186  Q
    ||||||||||||| ||  |||||||||||| ||||| ||||  ||| |||||| ||||||||||||||    
T  8815383 ggtgtgtttggattgagggtttaggagggggagggaggggagggttcacttttaatttttaaattacg 8815316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 210
Target Start/End: Original strand, 5562012 - 5562058
Alignment:
Q  164 ttacttttcatttttaaattacggatactatgaaatattttttaaaa 210  Q
    ||||||||||||||||||||||| ||| ||| || ||||||||||||    
T  5562012 ttacttttcatttttaaattacgtataatataaattattttttaaaa 5562058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 213
Target Start/End: Complemental strand, 13405178 - 13405128
Alignment:
Q  163 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 213  Q
    |||||||||||||||||||||||||| | ||  ||||||||||| ||||||    
T  13405178 tttacttttcatttttaaattacggacattaaaaaatatttttttaaaagt 13405128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 7394701 - 7394636
Alignment:
Q  121 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacg 186  Q
    ||||||||||| ||  |||||||||||||||||| ||||  ||| ||||||  |||||||||||||    
T  7394701 tgtgtttggattgagggtttaggaggggaagggaggggatggttcacttttattttttaaattacg 7394636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 206
Target Start/End: Original strand, 30365126 - 30365219
Alignment:
Q  113 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatttttt 206  Q
    ||||| ||||||||||||| ||  |||||||||| ||| ||| ||||  ||| |||||| |||||||||||||| | |  || |||||||||||    
T  30365126 ttttagggtgtgtttggattgagggtttaggaggagaaaggaggggagagttcacttttaatttttaaattacgaacaacataaaatatttttt 30365219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 37032561 - 37032516
Alignment:
Q  179 aaattacggatactatgaaatattttttaaaaagttaacatattaa 224  Q
    |||||||||| |||| ||| | ||||||||||||||||||||||||    
T  37032561 aaattacggacactaggaagtgttttttaaaaagttaacatattaa 37032516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 210
Target Start/End: Complemental strand, 42919912 - 42919879
Alignment:
Q  177 ttaaattacggatactatgaaatattttttaaaa 210  Q
    |||||||||||||||||| |||||||||||||||    
T  42919912 ttaaattacggatactataaaatattttttaaaa 42919879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 189
Target Start/End: Complemental strand, 7503202 - 7503126
Alignment:
Q  113 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggat 189  Q
    ||||| ||||||||||||| ||   ||| |||||||| |||| ||||  ||||||||||| ||||||||||| ||||    
T  7503202 ttttagggtgtgtttggattgaggctttgggaggggaggggaggggagggtttacttttcgtttttaaattatggat 7503126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 11575646 - 11575582
Alignment:
Q  121 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 185  Q
    |||||||||||  |  |||||||| | ||||||| ||||  ||||||||||||||||||||||||    
T  11575646 tgtgtttggattcagggtttaggatgagaagggaggggagggtttacttttcatttttaaattac 11575582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 211
Target Start/End: Original strand, 24243052 - 24243142
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaa 211  Q
    |||||||||||||||| |||||| || ||||||||| ||||    |||||||||||||| ||||||| || ||||| |||| | |||||||||    
T  24243052 ggtgtgtttggatggagagtttaaga-gggaagggaagggatgacttacttttcattttgaaattac-gacactataaaatgtcttttaaaaa 24243142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 41103506 - 41103605
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcattttt--aaattacggatactatgaaatattttttaaaaagttaa 216  Q
    ||||||||||||||||  ||||||||||||||| || ||||  ||||  ||||| |||||  |||||| ||| |||||||||  ||||| ||||| ||||    
T  41103506 ggtgtgtttggatggagggtttaggaggggaagagaggggagggtttgattttcgtttttaaaaattatggacactatgaaacgtttttaaaaaaattaa 41103605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 1e-31; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 114 - 223
Target Start/End: Complemental strand, 10650661 - 10650552
Alignment:
Q  114 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 213  Q
    |||| ||||||||||||| |||||||| ||||||||||||| | ||| ||||||||||  |||||||||||||||||||||||||| |||| ||||||||    
T  10650661 tttagggtgtgtttggattgaaagtttgggaggggaagggaggagaaagtttactttttgtttttaaattacggatactatgaaatgttttataaaaagt 10650562  T
Q  214 taacatatta 223  Q
    ||||||||||    
T  10650561 taacatatta 10650552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 119 - 219
Target Start/End: Complemental strand, 1658055 - 1657955
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    ||||||||||||||||  |||||||||||||||||| ||||  ||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||    
T  1658055 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatttttaaattacggacactataaaatgttttttaaaaagttaaca 1657956  T
Q  219 t 219  Q
    |    
T  1657955 t 1657955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 13634953 - 13634847
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  | ||||||||||||||||||||||| | |||||||||| ||||||||||||||||||    
T  13634953 ggtgtgtttggattgagggtttaggaggggaagggaggggaggggttacttttcatttttaaattacgaacactatgaaatgttttttaaaaagttaaca 13634854  T
Q  219 tattaac 225  Q
    |||||||    
T  13634853 tattaac 13634847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 114 - 225
Target Start/End: Complemental strand, 7544383 - 7544272
Alignment:
Q  114 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 213  Q
    |||| ||||||||||||||||  |||||||||||||||| | ||||  ||||  ||||||||||||||||||||| |||||||||| |||||||||||||    
T  7544383 tttaaggtgtgtttggatggagggtttaggaggggaaggaaggggagggtttggttttcatttttaaattacggacactatgaaatgttttttaaaaagt 7544284  T
Q  214 taacatattaac 225  Q
    || |||||||||    
T  7544283 tagcatattaac 7544272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 119 - 224
Target Start/End: Original strand, 8502837 - 8502942
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    ||||||||||||||||  ||||| || ||||| ||||||||  ||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  8502837 ggtgtgtttggatggatggtttatgaagggaatggatgggagggttcacttttcatttttaaattacggacattatgaaatattttttaaaaagttaaca 8502936  T
Q  219 tattaa 224  Q
     |||||    
T  8502937 aattaa 8502942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 14245090 - 14245196
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    ||||||||||||| ||  |||||||||||||||||| ||||   |||||||||| ||||||||||||||| ||| |||||| ||||||| ||||||||||    
T  14245090 ggtgtgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttttttaaattacggacactgtgaaatgttttttagaaagttaaca 14245189  T
Q  219 tattaac 225  Q
    |||||||    
T  14245190 tattaac 14245196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 223
Target Start/End: Complemental strand, 36363271 - 36363170
Alignment:
Q  122 gtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatat 221  Q
    |||||||||||||  |||||||||||||||||| | ||  ||| ||||||||||||||||||||||||||||| |||| | ||||| |||||||||||||    
T  36363271 gtgtttggatggagggtttaggaggggaagggaggagagagttcacttttcatttttaaattacggatactataaaatgtcttttagaaagttaacatat 36363172  T
Q  222 ta 223  Q
    ||    
T  36363171 ta 36363170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 37607136 - 37607030
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    ||||||||||||||||  ||||| ||||| ||||||   ||  |||||||||||||||||||| ||| ||||||||||||| |||| |||||||||||||    
T  37607136 ggtgtgtttggatggagggtttacgagggaaagggagatgatggtttacttttcatttttaaaatacagatactatgaaatgttttataaaaagttaaca 37607037  T
Q  219 tattaac 225  Q
    |||||||    
T  37607036 tattaac 37607030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 37779345 - 37779239
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    ||||||||||||||||  ||||| ||||| ||||||   ||  |||||||||||||||||||| ||| ||||||||||||| |||| |||||||||||||    
T  37779345 ggtgtgtttggatggagggtttacgagggaaagggagatgatggtttacttttcatttttaaactacagatactatgaaatgttttataaaaagttaaca 37779246  T
Q  219 tattaac 225  Q
    |||||||    
T  37779245 tattaac 37779239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 120 - 213
Target Start/End: Original strand, 9798615 - 9798708
Alignment:
Q  120 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 213  Q
    |||||||||||||||   |||||||||  |||||||| ||  |||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  9798615 gtgtgtttggatggaggatttaggaggaaaagggatgtgagagtttacttttcatttttaaattacggatactacgaaatgttttttaaaaagt 9798708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 26415136 - 26415029
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggagggg-aagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaac 217  Q
    ||||||||||||||||  ||||| |||||| || ||| ||||  ||||||||||||||||||| |||| || |||||||||| |||| ||||||||||||    
T  26415136 ggtgtgtttggatggagggtttatgagggggaaaggaggggagagtttacttttcatttttaagttacagacactatgaaatgttttataaaaagttaac 26415037  T
Q  218 atattaac 225  Q
    ||||||||    
T  26415036 atattaac 26415029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 114 - 224
Target Start/End: Complemental strand, 10476275 - 10476165
Alignment:
Q  114 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 213  Q
    |||| ||||||||||||||||  |||||||||||||||||| |||| ||||||||| | ||||||||||||||   |||||||||||||| | |||||      
T  10476275 tttagggtgtgtttggatggagggtttaggaggggaagggaggggagtgtttacttataatttttaaattacgaccactatgaaatatttataaaaaaaa 10476176  T
Q  214 taacatattaa 224  Q
     ||||||||||    
T  10476175 aaacatattaa 10476165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 16938721 - 16938615
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    ||||||||||||||||  ||||||||| |||| ||| ||||  |||||  ||||||||||||||||| || |||||||||| ||||||||| ||||||||    
T  16938721 ggtgtgtttggatggagggtttaggagaggaatggaggggagggtttagatttcatttttaaattactgacactatgaaatgttttttaaagagttaaca 16938622  T
Q  219 tattaac 225  Q
    | |||||    
T  16938621 tgttaac 16938615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 28279478 - 28279584
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    ||||||||||||||||  |||| ||| ||||| ||  | |||  |||||||||||||||||||||| ||| | |||||||| ||||||||||||||||||    
T  28279478 ggtgtgtttggatggagggtttgggatgggaaagggggtgaaaatttacttttcatttttaaattatggacattatgaaatgttttttaaaaagttaaca 28279577  T
Q  219 tattaac 225  Q
    |||||||    
T  28279578 tattaac 28279584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 4373611 - 4373674
Alignment:
Q  162 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    |||||||||| |||||||||||||||| ||| ||||||||||||| ||||||||||||||||||    
T  4373611 gtttacttttaatttttaaattacggacactgtgaaatatttttttaaaagttaacatattaac 4373674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 36392195 - 36392258
Alignment:
Q  162 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    |||||||||||||||||||||||| || |||||||||| |||| ||||||||||||||||||||    
T  36392195 gtttacttttcatttttaaattacagacactatgaaatgttttataaaaagttaacatattaac 36392258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 20146917 - 20146974
Alignment:
Q  168 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    ||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||    
T  20146917 ttttcatttttaaattacggtcactatgaaatgttttttaaaaagttaacatattaac 20146974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 43607 - 43543
Alignment:
Q  162 gtttacttttcatttttaaa-ttacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    |||||||||||||||||||| ||||| | ||||||||||||||||| ||||||||||||||||||    
T  43607 gtttacttttcatttttaaaattacgaacactatgaaatattttttgaaaagttaacatattaac 43543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 9857072 - 9857016
Alignment:
Q  169 tttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    |||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||    
T  9857072 tttcatttttaagttacggacactatgaaatgttttttaaaaagttaacatattaac 9857016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 163 - 223
Target Start/End: Original strand, 20513491 - 20513551
Alignment:
Q  163 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatta 223  Q
    ||||||||||||||||||| ||| || |||||||||| |||||||||||||||||||||||    
T  20513491 tttacttttcatttttaaactacagacactatgaaatgttttttaaaaagttaacatatta 20513551  T

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Target: chr5; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 10072692 - 10072755
Alignment:
Q  162 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    ||||||||||||| ||||||||  |  |||||||||||||||||||||||||||||||||||||    
T  10072692 gtttacttttcatatttaaattgtgagtactatgaaatattttttaaaaagttaacatattaac 10072755  T

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Target: chr5; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 37551647 - 37551543
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    ||||||||||||||||  ||||| ||||| ||||||  |||  |||||||||||||||||||| ||| || ||  |||||| |||| |||||||||||||    
T  37551647 ggtgtgtttggatggagggtttacgagggaaagggagaggatggtttacttttcatttttaaactacagacac--tgaaatgttttataaaaagttaaca 37551550  T
Q  219 tattaac 225  Q
    |||||||    
T  37551549 tattaac 37551543  T

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Target: chr5; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 37654477 - 37654373
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    ||||||||||||||||  ||||| ||||| ||||||  |||  |||||||||||||||||||| ||| || ||  |||||| |||| |||||||||||||    
T  37654477 ggtgtgtttggatggagggtttacgagggaaagggagaggatggtttacttttcatttttaaactacagacac--tgaaatgttttataaaaagttaaca 37654380  T
Q  219 tattaac 225  Q
    |||||||    
T  37654379 tattaac 37654373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 14245288 - 14245202
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttt 205  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||||  ||||||||||||||||||||| ||| |||||| |||||    
T  14245288 ggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcatttttaaattacggacactgtgaaatgttttt 14245202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 16501836 - 16501898
Alignment:
Q  163 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    |||| ||||||||||||||||||||| | |||||||| |||||| ||||||||||||||||||    
T  16501836 tttagttttcatttttaaattacggacattatgaaatgtttttttaaaagttaacatattaac 16501898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 194
Target Start/End: Complemental strand, 11757144 - 11757070
Alignment:
Q  120 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactat 194  Q
    |||||||||||||||  ||||| |||||||||||| ||||  |||||  |||||||||||||||||||| |||||    
T  11757144 gtgtgtttggatggagggtttaagaggggaagggaggggagggtttagatttcatttttaaattacggacactat 11757070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 188
Target Start/End: Original strand, 13634713 - 13634782
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 188  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||||||||||| ||||||||| |||||    
T  13634713 ggtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaataacgga 13634782  T

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Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 222
Target Start/End: Original strand, 17780279 - 17780340
Alignment:
Q  162 gtttacttttcatttttaaattacggatactatgaaat-attttttaaaaagttaacatatt 222  Q
    |||||||||||| |||||||||||||||| ||| ||||  ||||||||||||||||||||||    
T  17780279 gtttacttttcagttttaaattacggatattataaaatgtttttttaaaaagttaacatatt 17780340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 22023568 - 22023503
Alignment:
Q  162 gtttacttttcatttttaaattacggata-ctatgaaatatttttt-aaaaagttaacatattaac 225  Q
    ||||||||||||||| |||||||||||||  |||||||| |||||| |||||||||||||||||||    
T  22023568 gtttacttttcatttataaattacggatatttatgaaatgttttttaaaaaagttaacatattaac 22023503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 188
Target Start/End: Original strand, 26414895 - 26414964
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 188  Q
    ||||||||||||| ||  |||||||||| ||||||| ||||  ||||||||||| |||||||||||||||    
T  26414895 ggtgtgtttggattgagggtttaggaggagaagggaggggagggtttacttttcgtttttaaattacgga 26414964  T

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Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 205
Target Start/End: Original strand, 10650427 - 10650517
Alignment:
Q  117 atggtgtgtttggatggaaagtttaggaggggaa--gggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttt 205  Q
    |||||| |||||||||||   |||||||||||||  |||| ||||   ||||||||| |||||||||||||||| |||||||||| |||||    
T  10650427 atggtgcgtttggatggaggatttaggaggggaaaagggaggggaggatttactttttatttttaaattacggacactatgaaatgttttt 10650517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 32727822 - 32727885
Alignment:
Q  162 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    |||||| ||| ||||||||||||||| || ||||||||||||||||||||   |||||||||||    
T  32727822 gtttacattttatttttaaattacgggtattatgaaatattttttaaaaaacgaacatattaac 32727885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 186
Target Start/End: Original strand, 34980812 - 34980879
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacg 186  Q
    ||||||||||||| ||| |||||||||||||||||| || |  ||| |||||| ||||||||||||||    
T  34980812 ggtgtgtttggattgaaggtttaggaggggaagggagggaagggttcacttttaatttttaaattacg 34980879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 17024270 - 17024332
Alignment:
Q  163 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    ||||||||||||||||||||| | || | |||||||| || |||||||||||| |||||||||    
T  17024270 tttacttttcatttttaaattgcagacattatgaaatgttctttaaaaagttatcatattaac 17024332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 4423404 - 4423347
Alignment:
Q  168 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    ||||||||||||||||||| | | ||||||||||||||| |||| ||| |||||||||    
T  4423404 ttttcatttttaaattacgaacattatgaaatatttttttaaaatttagcatattaac 4423347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 210
Target Start/End: Complemental strand, 2556215 - 2556167
Alignment:
Q  162 gtttacttttcatttttaaattacggatactatgaaatattttttaaaa 210  Q
    ||||||||||||||||||||||| ||||  ||| |||||||||||||||    
T  2556215 gtttacttttcatttttaaattatggatgatataaaatattttttaaaa 2556167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 2550592 - 2550533
Alignment:
Q  121 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaa 180  Q
    ||||||||||| ||  |||||||||||||||||| ||||  ||||||||||| |||||||    
T  2550592 tgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaa 2550533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 11419237 - 11419300
Alignment:
Q  162 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    |||||||||||||||| |||||| ||| | ||| |||| ||||| ||||||| |||||||||||    
T  11419237 gtttacttttcattttcaaattaaggacaatataaaatgtttttaaaaaagtaaacatattaac 11419300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 10476028 - 10476090
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaa 181  Q
    |||||||||| || ||  |||||||||||||||||||| ||  ||||||||||| ||||||||    
T  10476028 ggtgtgtttgaattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaa 10476090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 184
Target Start/End: Original strand, 33744190 - 33744260
Alignment:
Q  114 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 184  Q
    |||| ||||||||||||||||  ||| ||| || ||||||| ||||  ||||||||||| |||||||||||    
T  33744190 tttagggtgtgtttggatggagggttaaggcggagaagggaggggagggtttacttttcttttttaaatta 33744260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 40815299 - 40815365
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 185  Q
    ||||||||||||| |||  ||||||||||||||||| | ||   |||||||||| ||||||||||||    
T  40815299 ggtgtgtttggattgaagatttaggaggggaagggaagagaggatttacttttcttttttaaattac 40815365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 188
Target Start/End: Original strand, 16938481 - 16938550
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 188  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||||  ||||| ||||||| |||||||    
T  16938481 ggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcttttttaagttacgga 16938550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 206
Target Start/End: Original strand, 2550397 - 2550441
Alignment:
Q  162 gtttacttttcatttttaaattacggatactatgaaatatttttt 206  Q
    |||||||||||||||||||||||| || ||||||| || ||||||    
T  2550397 gtttacttttcatttttaaattacagacactatgatatgtttttt 2550441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 7e-30; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 18231828 - 18231722
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    ||||||||||||||||  |||||||||||||||||| ||||   |||||||||||||||||||||||  | |||||||||| ||||||||||||||||||    
T  18231828 ggtgtgtttggatggagcgtttaggaggggaagggaggggaggatttacttttcatttttaaattacaaacactatgaaatgttttttaaaaagttaaca 18231729  T
Q  219 tattaac 225  Q
    |||||||    
T  18231728 tattaac 18231722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 24970187 - 24970274
Alignment:
Q  138 tttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaact 226  Q
    ||||||||||||||| | ||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24970187 tttaggaggggaagg-aggggatgatttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaact 24970274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 123 - 225
Target Start/End: Original strand, 4833537 - 4833639
Alignment:
Q  123 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatt 222  Q
    ||||||||||||  |||||||||||||||||| ||||  |||||||||||||||||||||||| || |||||||||| |||| |||||||||||| ||||    
T  4833537 tgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatttttaaattacagacactatgaaatgttttataaaaagttaacctatt 4833636  T
Q  223 aac 225  Q
    |||    
T  4833637 aac 4833639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 41496959 - 41497065
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    ||||||||||||||||  |||||||||||||||||| ||||   ||||||||| |||||||||||||||| | || ||||| ||||||||||| ||||||    
T  41496959 ggtgtgtttggatggagggtttaggaggggaagggaggggatgatttactttttatttttaaattacggacaataggaaatgttttttaaaaatttaaca 41497058  T
Q  219 tattaac 225  Q
    |||||||    
T  41497059 tattaac 41497065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 47391098 - 47390992
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    ||||||||||||||||  ||||| |||||||||||| ||||  ||||  ||||||||||||||||||||| ||||| ||| ||||||||||| |||||||    
T  47391098 ggtgtgtttggatggagggtttaagaggggaagggaggggagagtttggttttcatttttaaattacggacactataaaacattttttaaaatgttaaca 47390999  T
Q  219 tattaac 225  Q
    |||||||    
T  47390998 tattaac 47390992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 120 - 225
Target Start/End: Complemental strand, 42306571 - 42306466
Alignment:
Q  120 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 219  Q
    |||||||||||| ||  ||||||||||||||  || ||||  ||||| ||||||||||||||||||||| |||||||||| ||||||||||||||| |||    
T  42306571 gtgtgtttggattgagggtttaggaggggaattgaggggatggtttaattttcatttttaaattacggacactatgaaatgttttttaaaaagttagcat 42306472  T
Q  220 attaac 225  Q
    ||||||    
T  42306471 attaac 42306466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 122 - 225
Target Start/End: Complemental strand, 10315872 - 10315769
Alignment:
Q  122 gtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatat 221  Q
    |||||||||||||| ||||||||||||||||||  ||    |||| |||||||||||||| |||||| |||||||||| ||||||||||| |||||||||    
T  10315872 gtgtttggatggaaggtttaggaggggaagggagagggtgatttatttttcatttttaaaatacggacactatgaaatgttttttaaaaatttaacatat 10315773  T
Q  222 taac 225  Q
    ||||    
T  10315772 taac 10315769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 33655153 - 33655216
Alignment:
Q  162 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  33655153 gtttacttttcatttttaaattacggacactatgaaatgttttttaaaaagttaacatattaac 33655216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 221
Target Start/End: Original strand, 40196534 - 40196636
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    ||||||||||||||||  |||| |||||||||||||  |||  ||||||||||||||||| ||||||||| ||||| |||| |||| |||||||||||||    
T  40196534 ggtgtgtttggatggagggtttgggaggggaagggagaggagggtttacttttcatttttgaattacggacactataaaatgttttataaaaagttaaca 40196633  T
Q  219 tat 221  Q
    |||    
T  40196634 tat 40196636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 45940658 - 45940764
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    ||||||||||||||||| |||||| ||||||||||| || || |||||||||| ||||||| |||||||| |||||||||| ||||||| |||| ||  |    
T  45940658 ggtgtgtttggatggaaggtttagaaggggaagggagggcaaagtttactttttatttttatattacggacactatgaaatgttttttacaaagatagta 45940757  T
Q  219 tattaac 225  Q
    |||||||    
T  45940758 tattaac 45940764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 34235053 - 34235114
Alignment:
Q  163 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaa 224  Q
    |||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||    
T  34235053 tttacttttcatttttaaattacggacactatgaaatgttttataaaaagttaacatattaa 34235114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 114 - 225
Target Start/End: Original strand, 13770945 - 13771054
Alignment:
Q  114 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 213  Q
    |||| ||||||||||||| ||   ||||||||||||||||| ||||   ||||||| | |||||||||||||||| ||||| |||||  || ||||||||    
T  13770945 tttagggtgtgtttggattgaggatttaggaggggaagggaggggaggatttacttattatttttaaattacggacactataaaata--ttataaaaagt 13771042  T
Q  214 taacatattaac 225  Q
    ||||||||||||    
T  13771043 taacatattaac 13771054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 32872826 - 32872889
Alignment:
Q  162 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    ||||||||||| ||||||||||||| ||| ||| ||||| ||||||||||||||||||||||||    
T  32872826 gtttacttttcttttttaaattacgaatattataaaatactttttaaaaagttaacatattaac 32872889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 1051520 - 1051605
Alignment:
Q  137 gtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatta 223  Q
    ||||||||||||||  || ||||  ||| || |||||||||||||||||||| || ||||||| |||||||||||||||||||||||    
T  1051520 gtttaggaggggaatagaggggagggttaacatttcatttttaaattacggacac-atgaaatgttttttaaaaagttaacatatta 1051605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 13425122 - 13425228
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    ||||||||||||| ||  |||||||||||||||| |  |||  ||||| |||| ||||||||||||| || ||||  ||||||||||| |||||| ||||    
T  13425122 ggtgtgtttggatagagggtttaggaggggaaggaagaggatggtttattttttatttttaaattacagacactacaaaatattttttcaaaagtcaaca 13425221  T
Q  219 tattaac 225  Q
    |||||||    
T  13425222 tattaac 13425228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 205
Target Start/End: Original strand, 48881560 - 48881646
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttt 205  Q
    ||||||||||||||||  |||||||||||||||||| ||||  | ||||||||| ||||||||||||||| | ||| ||||| ||||    
T  48881560 ggtgtgtttggatggagggtttaggaggggaagggaggggatggcttacttttcttttttaaattacggacattataaaataatttt 48881646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 188
Target Start/End: Complemental strand, 39856107 - 39856038
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 188  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||||||||||| |||||||||||||||    
T  39856107 ggtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaattacgga 39856038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 224
Target Start/End: Complemental strand, 25887417 - 25887329
Alignment:
Q  137 gtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaat-attttttaaaaagttaacatattaa 224  Q
    |||||||||||||||||| ||||  |||||| |||||||||||||||||| | |  |||||||  |||||| |||||||||||||||||    
T  25887417 gtttaggaggggaagggaggggagagtttacatttcatttttaaattacgaaaatcatgaaatgttttttttaaaagttaacatattaa 25887329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 199
Target Start/End: Original strand, 36267555 - 36267635
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaat 199  Q
    ||||||||||||||||  |||||||||||||||||| ||||  | ||| ||||| ||||||||||||||||| ||| ||||    
T  36267555 ggtgtgtttggatggagggtttaggaggggaagggaggggagggcttagttttcttttttaaattacggatattataaaat 36267635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 40572287 - 40572342
Alignment:
Q  169 tttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    ||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||    
T  40572287 tttcatttttaaattacggatgctataaaatatttttt-aaaagttaacatattaac 40572342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 188
Target Start/End: Complemental strand, 31571712 - 31571643
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 188  Q
    ||||||||||||| ||  ||||||||||||||| || ||||  ||||||||||| |||||||||||||||    
T  31571712 ggtgtgtttggattgagggtttaggaggggaagcgaggggagagtttacttttcttttttaaattacgga 31571643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 225
Target Start/End: Complemental strand, 43230476 - 43230372
Alignment:
Q  120 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 219  Q
    ||||||||||||| |  ||||| ||| |||| | | ||||  |||||||||| |||||||||||||||| ||| |||| | |||||| ||||||||||||    
T  43230476 gtgtgtttggatgtagggtttatgagaggaaagaaggggagagtttactttttatttttaaattacggacact-tgaattttttttttaaaagttaacat 43230378  T
Q  220 attaac 225  Q
    ||||||    
T  43230377 attaac 43230372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 222
Target Start/End: Original strand, 31553182 - 31553287
Alignment:
Q  114 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 213  Q
    |||| ||||||||||||||||  |||||||||||||||||| | ||  ||  |||||| ||||| |||| ||||| | |||||||| |||||||||||||    
T  31553182 tttagggtgtgtttggatggag-gtttaggaggggaagggaggagagggtc-acttttaatttt-aaataacggacattatgaaatgttttttaaaaagt 31553278  T
Q  214 taacatatt 222  Q
    |||||||||    
T  31553279 taacatatt 31553287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 33519290 - 33519224
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 185  Q
    ||||||||||||||||  |||||||||||||||||| ||||  | ||||||||| | ||||||||||    
T  33519290 ggtgtgtttggatggagggtttaggaggggaagggaggggagggattacttttcttctttaaattac 33519224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 188
Target Start/End: Complemental strand, 13771188 - 13771119
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 188  Q
    ||||||||| ||| ||  |||||||||||||||||| | ||  ||||||||||| |||||||||||||||    
T  13771188 ggtgtgtttagattgagggtttaggaggggaagggaggtgagagtttacttttcgtttttaaattacgga 13771119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 19835906 - 19835845
Alignment:
Q  164 ttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    ||||||||||||||||||||||||| ||||| |||| || |||||||| |||| ||| ||||    
T  19835906 ttacttttcatttttaaattacggaaactataaaatgttctttaaaaaattaaaataataac 19835845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 188
Target Start/End: Original strand, 28074105 - 28074174
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 188  Q
    ||||||||||||| ||| |||||||||||||||||| ||||    | ||||||| |||||||||||||||    
T  28074105 ggtgtgtttggattgaaggtttaggaggggaagggaggggagaactcacttttcttttttaaattacgga 28074174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 188
Target Start/End: Complemental strand, 34228561 - 34228492
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 188  Q
    |||||||||| || ||| |||||||||| ||||||| ||||   ||||||||||||||| ||||||||||    
T  34228561 ggtgtgtttgaattgaaggtttaggaggagaagggaggggaggatttacttttcattttaaaattacgga 34228492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 196
Target Start/End: Complemental strand, 41008425 - 41008348
Alignment:
Q  114 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatga 196  Q
    |||| |||||||||||||| |  |||||||||||||||| |   ||  |||||| ||||||||||||||||||||||||||||    
T  41008425 tttagggtgtgtttggatgcagggtttaggaggggaaggaa---ga--gtttacatttcatttttaaattacggatactatga 41008348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 211
Target Start/End: Original strand, 30592255 - 30592347
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaa 211  Q
    ||||| ||||||||||   |||||||||| |||||| ||||  | ||||||||| |||||||||||| || ||||| ||||  ||||||||||    
T  30592255 ggtgtatttggatggaggatttaggagggaaagggaagggagggcttacttttcttttttaaattacagacactataaaatgatttttaaaaa 30592347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 2087786 - 2087833
Alignment:
Q  164 ttacttttcatttttaaattacggatactatgaaatattttttaaaaa 211  Q
    ||||||||| ||||||||||||||||| ||| ||||| ||||||||||    
T  2087786 ttacttttcttttttaaattacggatattataaaataatttttaaaaa 2087833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 225
Target Start/End: Original strand, 22163167 - 22163217
Alignment:
Q  174 tttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    ||||||||||||||| |||||||||| ||||||| |||| ||||||||||||    
T  22163167 tttttaaattacggacactatgaaatgttttttagaaag-taacatattaac 22163217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 225
Target Start/End: Original strand, 22221875 - 22221925
Alignment:
Q  174 tttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    ||||||||||||||| |||||||||| ||||||| |||| ||||||||||||    
T  22221875 tttttaaattacggacactatgaaatgttttttagaaag-taacatattaac 22221925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 201
Target Start/End: Original strand, 30891039 - 30891078
Alignment:
Q  162 gtttacttttcatttttaaattacggatactatgaaatat 201  Q
    ||||||||||||||||||||||||||| ||||| ||||||    
T  30891039 gtttacttttcatttttaaattacggacactataaaatat 30891078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 186
Target Start/End: Original strand, 37925843 - 37925910
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacg 186  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||| ||||||  |||||||||||||    
T  37925843 ggtgtgtttggattgagggtttaggaggggaagggaggggagggttcacttttattttttaaattacg 37925910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 184
Target Start/End: Original strand, 47390852 - 47390922
Alignment:
Q  114 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 184  Q
    |||| ||||||||||||| ||  | ||||||||||||||||  |||  ||||||||||| |||||||||||    
T  47390852 tttagggtgtgtttggattgaggggttaggaggggaagggagtggagggtttacttttcttttttaaatta 47390922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 42087188 - 42087131
Alignment:
Q  168 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    |||||||||||||||||||| || |||  ||  ||||||||||||||| |||||||||    
T  42087188 ttttcatttttaaattacgggtattatacaaagttttttaaaaagttagcatattaac 42087131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 33655349 - 33655285
Alignment:
Q  120 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 184  Q
    |||||||||||| ||  ||||||||||||||| || | ||  ||||||||||| |||||||||||    
T  33655349 gtgtgtttggattgagggtttaggaggggaagagaggcgagggtttacttttcttttttaaatta 33655285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 189
Target Start/End: Complemental strand, 34235208 - 34235180
Alignment:
Q  161 tgtttacttttcatttttaaattacggat 189  Q
    |||||||||||||||||||||||||||||    
T  34235208 tgtttacttttcatttttaaattacggat 34235180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 225
Target Start/End: Original strand, 47229888 - 47229940
Alignment:
Q  173 atttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    ||||||||| ||||| || |||||||||||| ||||||||  |||||||||||    
T  47229888 atttttaaactacgggtattatgaaatatttcttaaaaagcgaacatattaac 47229940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 7e-30; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 45742132 - 45742026
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    |||||||||||||| |  ||||||| ||| |||||| ||||  ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  45742132 ggtgtgtttggatgaagggtttaggcgggaaagggaggggagagtttacttttcatttttaaattacggacactatgaaatgttttttaaaaagttaaca 45742033  T
Q  219 tattaac 225  Q
    |||||||    
T  45742032 tattaac 45742026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 54935311 - 54935206
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    ||||||||||||||||  |||||||||||||||||| ||||  ||||| ||||||||||||||||||||| |||||||||| | ||||||||||||| ||    
T  54935311 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtttatttttcatttttaaattacggacactatgaaatgtattttaaaaagttatca 54935212  T
Q  219 tattaa 224  Q
    ||||||    
T  54935211 tattaa 54935206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 41174587 - 41174481
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    ||||||||||||||||  |||||||||||||||||| ||||  ||||| ||||||||||||| ||| ||| ||||||||||  |||||||||||||| ||    
T  41174587 ggtgtgtttggatggagggtttaggaggggaagggaggggatggtttagttttcatttttaatttagggacactatgaaatggtttttaaaaagttagca 41174488  T
Q  219 tattaac 225  Q
    |||||||    
T  41174487 tattaac 41174481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 225
Target Start/End: Original strand, 31348340 - 31348429
Alignment:
Q  136 agtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    |||||| |||||||||||| || |  ||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||    
T  31348340 agtttatgaggggaagggagggaagggtttacttttcatttttaaattacggacactatgaaatgttttttaaaaagctaacatattaac 31348429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 114 - 225
Target Start/End: Original strand, 5730827 - 5730938
Alignment:
Q  114 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 213  Q
    |||| ||||||||||||||||  ||||||||||| ||| |||||||  |||||  ||||||||||||||||||||  |||| ||||||||||| || |||    
T  5730827 tttagggtgtgtttggatggagggtttaggagggaaagagatgggagggtttagatttcatttttaaattacggaccctataaaatattttttgaagagt 5730926  T
Q  214 taacatattaac 225  Q
    ||||||||||||    
T  5730927 taacatattaac 5730938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 119 - 214
Target Start/End: Complemental strand, 6938489 - 6938394
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagtt 214  Q
    ||||||||||||||||| ||||| |||||||| ||| ||||  ||| ||||||||||||||||||||||||| ||| |||| ||||||||||||||    
T  6938489 ggtgtgtttggatggaaggtttatgaggggaatggaggggagggttcacttttcatttttaaattacggatattataaaatgttttttaaaaagtt 6938394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 24565348 - 24565454
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    ||||||||||||||||| |||||||| ||||||    ||||  ||||||||||||||||||||||||||||| || |||||  ||||||||||||||||     
T  24565348 ggtgtgtttggatggaaggtttaggaagggaagactggggagggtttacttttcatttttaaattacggatattacgaaatgctttttaaaaagttaact 24565447  T
Q  219 tattaac 225  Q
    |||||||    
T  24565448 tattaac 24565454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 49735470 - 49735576
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||| ||||||||||||||||||||||| |  ||||||| | |||||||||||||||     
T  49735470 ggtgtgtttggattgagggtttaggaggggaagggaggggagggttcacttttcatttttaaattacggacaacatgaaatgtcttttaaaaagttaacc 49735569  T
Q  219 tattaac 225  Q
    |||||||    
T  49735570 tattaac 49735576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 54320676 - 54320570
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||||  |||| |||||||||||||||| |||||||||  ||||||||||||||| ||    
T  54320676 ggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgattttaatttttaaattacggacactatgaaacgttttttaaaaagttagca 54320577  T
Q  219 tattaac 225  Q
    |||||||    
T  54320576 tattaac 54320570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 27735987 - 27735881
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    ||||||||||||||||  |||||||||||||||||| |  |  ||| | ||||||||||||||||||||| ||||| |||| ||||||||| ||||| ||    
T  27735987 ggtgtgtttggatggagggtttaggaggggaagggaggatagggttcatttttcatttttaaattacggacactataaaatgttttttaaagagttagca 27735888  T
Q  219 tattaac 225  Q
    |||||||    
T  27735887 tattaac 27735881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 113 - 202
Target Start/End: Complemental strand, 37711371 - 37711282
Alignment:
Q  113 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatt 202  Q
    ||||| ||||||||||||||||  |||||||||||||||||| ||||  |||||  |||||||||||||||||||| ||||| |||||||    
T  37711371 ttttagggtgtgtttggatggagggtttaggaggggaagggaggggagggtttagatttcatttttaaattacggacactataaaatatt 37711282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 34111003 - 34110941
Alignment:
Q  162 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    |||||||||| |||||||||||||| ||||| |||||| |||||||||||||||||||||||||    
T  34111003 gtttactttttatttttaaattacg-atactgtgaaatgttttttaaaaagttaacatattaac 34110941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 188
Target Start/End: Complemental strand, 31348563 - 31348494
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 188  Q
    ||||||||||||| || ||||||||||||||||||| ||||  ||||||||||| ||||||||| |||||    
T  31348563 ggtgtgtttggattgagagtttaggaggggaagggaggggagggtttacttttcttttttaaataacgga 31348494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 224
Target Start/End: Complemental strand, 29798478 - 29798422
Alignment:
Q  168 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaa 224  Q
    ||||||||||||||||||||| |||||||||| ||||||||||| ||||||| ||||    
T  29798478 ttttcatttttaaattacggacactatgaaatgttttttaaaaaattaacatgttaa 29798422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 16400987 - 16400936
Alignment:
Q  174 tttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    ||||||||||| ||| ||||||||||| ||||||||||||||||||||||||    
T  16400987 tttttaaattagggacactatgaaatagtttttaaaaagttaacatattaac 16400936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 188
Target Start/End: Complemental strand, 1968601 - 1968532
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 188  Q
    ||||||||||||| ||  |||||||||||||||||| || |  ||||| |||||||||||||||||||||    
T  1968601 ggtgtgtttggattgagggtttaggaggggaagggagggaagagtttaattttcatttttaaattacgga 1968532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 125 - 225
Target Start/End: Complemental strand, 35248922 - 35248822
Alignment:
Q  125 tttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaa 224  Q
    ||||||||||  ||||||||| || ||||| ||||  |||||||||||| |||||||||| ||| |||    |||||||||| |||||||||| ||||||    
T  35248922 tttggatggagggtttaggagaggtagggaggggagggtttacttttcaattttaaattatggacactcaagaatatttttttaaaagttaacgtattaa 35248823  T
Q  225 c 225  Q
    |    
T  35248822 c 35248822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 208
Target Start/End: Original strand, 21694910 - 21694981
Alignment:
Q  137 gtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaa 208  Q
    |||||||||||||||||| ||||  | ||||||||| ||||||||||||||| ||||| ||||  |||||||    
T  21694910 gtttaggaggggaagggacgggagggcttacttttcttttttaaattacggacactataaaatggtttttaa 21694981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 188
Target Start/End: Original strand, 27735749 - 27735816
Alignment:
Q  121 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 188  Q
    ||||||||||| ||  |||||||||||||||||| | ||  ||||| |||||||||||||||||||||    
T  27735749 tgtgtttggatcgagggtttaggaggggaagggaagagagggtttaattttcatttttaaattacgga 27735816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 183
Target Start/End: Complemental strand, 46007942 - 46007879
Alignment:
Q  120 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatt 183  Q
    |||||||||||| ||  |||||||||||||||||| ||||  ||||||||||| ||||||||||    
T  46007942 gtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaatt 46007879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 190
Target Start/End: Complemental strand, 2248050 - 2247972
Alignment:
Q  112 gttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggata 190  Q
    |||| ||||||||||||||| ||  |||||||||| |||| || ||||  ||||||||||| |||||||||||| ||||    
T  2248050 gtttaatggtgtgtttggattgagggtttaggaggagaagtgaagggagagtttacttttcttttttaaattacagata 2247972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 188
Target Start/End: Complemental strand, 45132737 - 45132668
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 188  Q
    |||||||||| || || |||||||||||||||| || | ||  ||||||||||| |||||||||||||||    
T  45132737 ggtgtgtttgaattgagagtttaggaggggaagagaggagatggtttacttttcttttttaaattacgga 45132668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 205
Target Start/End: Original strand, 45911327 - 45911368
Alignment:
Q  164 ttacttttcatttttaaattacggatactatgaaatattttt 205  Q
    ||||||||| ||||||||||||||||||||| ||||||||||    
T  45911327 ttacttttcttttttaaattacggatactataaaatattttt 45911368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 188
Target Start/End: Original strand, 54576329 - 54576398
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 188  Q
    ||||||||||||||||  |||||| ||||||||||| ||||  | ||||||||| |||||| ||||||||    
T  54576329 ggtgtgtttggatggagggtttagaaggggaagggaggggagggcttacttttcttttttagattacgga 54576398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 225
Target Start/End: Original strand, 17938115 - 17938215
Alignment:
Q  125 tttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaa 224  Q
    ||||||||||  |||||||||||||| ||| || |  ||||| ||||| ||||||||||| ||| | |||| ||| ||||||||||| |||| ||| |||    
T  17938115 tttggatggagggtttaggaggggaatggagggaagagtttaattttcgtttttaaattatggacattatggaatgttttttaaaaatttaaaataataa 17938214  T
Q  225 c 225  Q
    |    
T  17938215 c 17938215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 225
Target Start/End: Complemental strand, 22659413 - 22659325
Alignment:
Q  138 tttaggaggggaagggatgggaatgtttacttttcattttt-aaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    |||||||||  |||||| | || |||||||||||||||||| ||||||| || || || ||||||||||| |||| |||| ||||||||    
T  22659413 tttaggaggaaaagggaggagagtgtttacttttcattttttaaattacagacaccataaaatatttttttaaaaattaatatattaac 22659325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 186
Target Start/End: Original strand, 54935069 - 54935137
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaaggga-tgggaatgtttacttttcatttttaaattacg 186  Q
    ||||||||||||| ||  ||||||||||||||||||  ||||  ||||||||||| |||||||||||||    
T  54935069 ggtgtgtttggattgagggtttaggaggggaagggagggggagggtttacttttcttttttaaattacg 54935137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 44784190 - 44784128
Alignment:
Q  162 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    ||||||||||| ||||||||||||| | |||| |||||||||| | ||| ||||||||||||||    
T  44784190 gtttacttttcgtttttaaattacgaacactacgaaatattttct-aaacgttaacatattaac 44784128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 225
Target Start/End: Complemental strand, 6891590 - 6891496
Alignment:
Q  131 tggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    |||| |||||||||||||||| || ||||  ||||  ||||| ||||||||||| ||| |||||||| | ||||| ||||| |||| ||| ||||    
T  6891590 tggatagtttaggaggggaagagaggggagagtttgattttcgtttttaaattatggacactatgaattgtttttaaaaaaattaaaataataac 6891496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 36278450 - 36278388
Alignment:
Q  162 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaa 224  Q
    ||||| ||||| |||||||||||| || |||| ||||||||||||| ||| ||||| ||||||    
T  36278450 gtttagttttcgtttttaaattacagacactacgaaatattttttataaatttaacgtattaa 36278388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 46007744 - 46007809
Alignment:
Q  162 gtttacttttcatttttaaattacggatactatgaaa--tattttttaaaaagttaacatattaac 225  Q
    |||||||||||||||||||||||| || |  ||||||    |||||||||||||||||||||||||    
T  46007744 gtttacttttcatttttaaattaccgacataatgaaaatgtttttttaaaaagttaacatattaac 46007809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 47433951 - 47433885
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 185  Q
    ||||||||||| | ||  ||||||||||||||||||  |||  ||||||||||| ||||||||||||    
T  47433951 ggtgtgtttgggttgacggtttaggaggggaagggagaggagggtttacttttcttttttaaattac 47433885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 184
Target Start/End: Complemental strand, 47846303 - 47846233
Alignment:
Q  114 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 184  Q
    |||| ||||||||||||| ||  ||||| |||| ||||||||||||  ||||||||||  |||||||||||    
T  47846303 tttaaggtgtgtttggattgagggtttaagaggagaagggatgggagggtttacttttattttttaaatta 47846233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 204
Target Start/End: Complemental strand, 55510407 - 55510326
Alignment:
Q  122 gtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatttt 204  Q
    ||||||||||||| |||||| ||||| |||  ||| ||  |||||||||| |||||||||||||| | ||||| |||||||||    
T  55510407 gtgtttggatggagagtttaagagggaaagaaatgtgagggtttactttt-atttttaaattacgaacactataaaatatttt 55510326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 207
Target Start/End: Original strand, 37761467 - 37761555
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatttttta 207  Q
    ||||||||||||| || ||||||||||| ||| ||| || |  ||| |||||| |||||||||||||| | |  || ||||||||||||    
T  37761467 ggtgtgtttggattgagagtttaggaggagaaaggagggtagagttcacttttaatttttaaattacgaacaacataaaatatttttta 37761555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 7e-30; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 23748337 - 23748231
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    ||||||||||||||||  |||||||||||||||||| ||||  ||| |||||||||||||||| |||||| |||||||||| | ||||||||||||||||    
T  23748337 ggtgtgtttggatggagggtttaggaggggaagggaggggagggttcacttttcatttttaaactacggacactatgaaatgtcttttaaaaagttaaca 23748238  T
Q  219 tattaac 225  Q
    |||||||    
T  23748237 tattaac 23748231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 117 - 219
Target Start/End: Original strand, 8426879 - 8426981
Alignment:
Q  117 atggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaa 216  Q
    ||||||| |||| ||||| ||||||||||||||||||| ||||  |||||||||| |||||||||||| ||| |||||||||| ||||||||||||||||    
T  8426879 atggtgtatttgaatggagagtttaggaggggaagggaagggagggtttacttttaatttttaaattaaggacactatgaaatgttttttaaaaagttaa 8426978  T
Q  217 cat 219  Q
    |||    
T  8426979 cat 8426981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 36347543 - 36347649
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    |||||||||||||| |  |||||||||||||||||| | ||  ||| |||||||||||||| |||||||||||||||| |||||||||||| ||||||||    
T  36347543 ggtgtgtttggatgaagggtttaggaggggaagggaagagagagttcacttttcatttttatattacggatactatgacatattttttaaatagttaaca 36347642  T
Q  219 tattaac 225  Q
    |||||||    
T  36347643 tattaac 36347649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 36046206 - 36046312
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    ||||||||||||||||  ||||||||||||||  || ||||  ||||| ||||||||||||||||||||| ||||  |||| ||||||||||||||||||    
T  36046206 ggtgtgtttggatggagggtttaggaggggaaatgaggggagagtttatttttcatttttaaattacggacactagaaaatgttttttaaaaagttaaca 36046305  T
Q  219 tattaac 225  Q
    |||||||    
T  36046306 tattaac 36046312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 15224733 - 15224802
Alignment:
Q  156 gggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    |||| |||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||    
T  15224733 gggagtgtttacttttcatttttaaattacggacactatgaaatgttttttaaaaagctaacatattaac 15224802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 34209706 - 34209600
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    |||||||||||||| |  |||||| | |||| |||| || |  | ||||||||||||||||||||||  | |||||||||||||||||||||||||||||    
T  34209706 ggtgtgtttggatgaagggtttagaatgggaggggagggaagagattacttttcatttttaaattacaaacactatgaaatattttttaaaaagttaaca 34209607  T
Q  219 tattaac 225  Q
    |||||||    
T  34209606 tattaac 34209600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 16565978 - 16565917
Alignment:
Q  160 atgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatat 221  Q
    |||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  16565978 atgtttactttttatttttaaattacggatactatgaaacgttttttaaaaagttaacatat 16565917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 9631802 - 9631696
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 218  Q
    ||||||||||||||||  ||||||||||| ||||||   ||  ||| ||||||| ||||||||||||||| || ||||||| |  |||||||||||||||    
T  9631802 ggtgtgtttggatggagggtttaggagggaaagggagaagagggttaacttttcgtttttaaattacggacaccatgaaatgtcctttaaaaagttaaca 9631703  T
Q  219 tattaac 225  Q
    |||||||    
T  9631702 tattaac 9631696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 225
Target Start/End: Original strand, 36566874 - 36566959
Alignment:
Q  141 aggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaa-tattttttaaaaagttaacatattaac 225  Q
    |||||||||||||||| ||   |||||||||||||||||||||||||| | ||||||| | |||| ||||||||||||||||||||    
T  36566874 aggaggggaagggatgagaggatttacttttcatttttaaattacggacattatgaaagttttttataaaaagttaacatattaac 36566959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 119 - 223
Target Start/End: Complemental strand, 40022615 - 40022510
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaat-attttttaaaaagttaac 217  Q
    |||||| |||||||||  ||||| |||| ||||||| ||||  |||||| ||||||||||||||||| || ||||||||||  ||||||||||||| |||    
T  40022615 ggtgtgcttggatggagggtttaagaggagaagggaggggagggtttacatttcatttttaaattacagacactatgaaatgtttttttaaaaagtaaac 40022516  T
Q  218 atatta 223  Q
    ||||||    
T  40022515 atatta 40022510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 27926752 - 27926689
Alignment:
Q  162 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    ||||| ||||||||||||||||||||||||||| |||| ||  |||||||||||||||||||||    
T  27926752 gtttatttttcatttttaaattacggatactattaaattttggttaaaaagttaacatattaac 27926689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 39732774 - 39732837
Alignment:
Q  162 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    ||||||||||||||||||||||||| | | |||||||| |||| ||||||||||||||||||||    
T  39732774 gtttacttttcatttttaaattacgaacattatgaaatgttttataaaaagttaacatattaac 39732837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 1583272 - 1583222
Alignment:
Q  166 acttttcatttttaaattacggatactatgaaatattttttaaaaagttaa 216  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  1583272 acttttcatttttaaattacggacactatgaaatgttttttaaaaagttaa 1583222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 7681443 - 7681386
Alignment:
Q  162 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 219  Q
    |||||||||| ||||||||||| |||||| ||||||||||||||| ||||||||||||    
T  7681443 gtttactttttatttttaaattgcggatattatgaaatatttttttaaaagttaacat 7681386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 188
Target Start/End: Complemental strand, 36347783 - 36347714
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 188  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||||||||||| |||||||||||||||    
T  36347783 ggtgtgtttggattgagggtttaggaggggaagggaagggagagtttacttttcttttttaaattacgga 36347714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 211
Target Start/End: Complemental strand, 35736429 - 35736337
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaa 211  Q
    ||||||||||||||||  |||||||||| ||||||| ||||  | | ||||||| |||||||||| |||| |||||||||  |||||||||||    
T  35736429 ggtgtgtttggatggagggtttaggaggtgaagggaggggagggctcacttttcgtttttaaatttcggacactatgaaaagttttttaaaaa 35736337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 119 - 210
Target Start/End: Complemental strand, 887351 - 887261
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaa 210  Q
    ||||||| |||||| || |||||||||||||||||| ||||  | ||||||||| |||||||||||||||| |||| |||| ||||| ||||    
T  887351 ggtgtgtctggatg-aaggtttaggaggggaagggaggggagcgcttacttttcttttttaaattacggatgctataaaatgtttttaaaaa 887261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 39821868 - 39821805
Alignment:
Q  162 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    ||||| ||||| ||||||||||||||| ||||||||||| | |||||| |||||||||||||||    
T  39821868 gtttagttttcttttttaaattacggacactatgaaataatatttaaagagttaacatattaac 39821805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 42316809 - 42316872
Alignment:
Q  162 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    |||||||||||||||||||||| |  | |||||||||| ||||||||||||||||| |||||||    
T  42316809 gtttacttttcatttttaaattgcaaacactatgaaatgttttttaaaaagttaacgtattaac 42316872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 45257555 - 45257456
Alignment:
Q  113 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaat-attttttaaaaa 211  Q
    ||||| ||||||||||||||||   ||||||| ||||||||| | ||  ||||||||||| ||||||||||||||||| ||| |||| ||||||| ||||    
T  45257555 ttttagggtgtgtttggatggaggttttaggatgggaagggaggagatggtttacttttcttttttaaattacggatattataaaatgattttttgaaaa 45257456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 117 - 185
Target Start/End: Original strand, 9426985 - 9427053
Alignment:
Q  117 atggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 185  Q
    ||||||||||||||| |||||||||||||||||||||| | ||  ||||  ||||| ||||||||||||    
T  9426985 atggtgtgtttggattgaaagtttaggaggggaagggaggagagggtttgattttcttttttaaattac 9427053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 15224936 - 15224868
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgg 187  Q
    |||||||||||||  |  |||||||||||||||||| ||||  ||||||||||| ||||||||||||||    
T  15224936 ggtgtgtttggatcaagggtttaggaggggaagggaggggatggtttacttttcttttttaaattacgg 15224868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 195
Target Start/End: Complemental strand, 17380083 - 17380007
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatg 195  Q
    ||||||||||||| ||  ||||||||||||||| || ||||  ||||  ||||||||||||||||||||| ||||||    
T  17380083 ggtgtgtttggattgagggtttaggaggggaagtgaggggatggtttgattttcatttttaaattacggacactatg 17380007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 211
Target Start/End: Original strand, 31795772 - 31795863
Alignment:
Q  120 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaa 211  Q
    |||||||||||||||  ||||| |||| ||||||| ||||    ||||||||| ||||||||||||||| |||||||||  |||||| ||||    
T  31795772 gtgtgtttggatggagggtttatgaggtgaagggaggggaggacttacttttcgtttttaaattacggacactatgaaaagtttttttaaaa 31795863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 186
Target Start/End: Original strand, 34187577 - 34187644
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacg 186  Q
    ||||||||||||| || |||||||||| |||||| | ||||| ||| |||||| ||||||||||||||    
T  34187577 ggtgtgtttggattgagagtttaggagtggaaggaaggggaaggttcacttttaatttttaaattacg 34187644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 179 - 225
Target Start/End: Complemental strand, 17379994 - 17379948
Alignment:
Q  179 aaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    |||||||||| |||||||||| ||||||||||||||| |||||||||    
T  17379994 aaattacggacactatgaaatgttttttaaaaagttagcatattaac 17379948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 224
Target Start/End: Original strand, 19566822 - 19566928
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaat-attttttaaaaagttaac 217  Q
    |||||||||||| |||  |||||| |||| ||| ||  |||  |||||||| ||| ||||||||||| || ||||||||||  ||||||||||||||| |    
T  19566822 ggtgtgtttggacggagtgtttagaagggaaagagaatggagggtttacttctcagttttaaattacagacactatgaaatgtttttttaaaaagttagc 19566921  T
Q  218 atattaa 224  Q
    |||||||    
T  19566922 atattaa 19566928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 225
Target Start/End: Complemental strand, 12541999 - 12541902
Alignment:
Q  123 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatt 222  Q
    ||||||||||||  |||||||||  ||||||| ||| |  ||||||||||||    ||||||| |||||||| |||| |||||||||||||||||| |||    
T  12541999 tgtttggatggagggtttaggagaagaaggga-gggtagatttacttttcat----aaattacagatactataaaatgttttttaaaaagttaacacatt 12541905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 188
Target Start/End: Complemental strand, 39732978 - 39732901
Alignment:
Q  111 tgttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 188  Q
    ||||||| ||||||||||||| ||| ||||  |||||||||| | ||||   |||||||||| |||||||||||||||    
T  39732978 tgttttagggtgtgtttggattgaaggtttgagaggggaaggaaagggatgatttacttttcgtttttaaattacgga 39732901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 181
Target Start/End: Complemental strand, 8427110 - 8427051
Alignment:
Q  122 gtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaa 181  Q
    |||||||||| ||  ||||||||||| |||||| ||||  ||||||||||||||||||||    
T  8427110 gtgtttggattgagggtttaggagggaaagggaggggagagtttacttttcatttttaaa 8427051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 188
Target Start/End: Complemental strand, 22356252 - 22356177
Alignment:
Q  113 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 188  Q
    ||||| ||||||||||||| ||   ||||||||||||||||| ||||  ||| | ||||| |||||||||||||||    
T  22356252 ttttagggtgtgtttggattgaggatttaggaggggaagggaggggagggttcatttttcttttttaaattacgga 22356177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 225
Target Start/End: Original strand, 28262500 - 28262551
Alignment:
Q  174 tttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    ||||||||||| | | ||||||||||||||||||||||||||| ||| ||||    
T  28262500 tttttaaattatgaacactatgaaatattttttaaaaagttaatataataac 28262551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 186
Target Start/End: Original strand, 31061361 - 31061428
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacg 186  Q
    ||||||||||||| ||| |||||||||||||| ||||||||  | | ||||||  |||||||||||||    
T  31061361 ggtgtgtttggattgaaggtttaggaggggaaaggatgggagggctcacttttattttttaaattacg 31061428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 188
Target Start/End: Original strand, 35736172 - 35736246
Alignment:
Q  114 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 188  Q
    |||| ||||||||||||| ||  |||||||||||||||||| ||||  | ||| ||||| ||||||||| |||||    
T  35736172 tttagggtgtgtttggattgagggtttaggaggggaagggaggggaggggttaattttcttttttaaatcacgga 35736246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 212
Target Start/End: Original strand, 16713494 - 16713587
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaag 212  Q
    ||||||||| ||| ||  ||||| |||||||||||| ||||  ||| | |||| |||||||||||||| | | ||| ||||||||||| |||||    
T  16713494 ggtgtgttttgattgagggtttaagaggggaagggaagggatagttcaattttaatttttaaattacgtacaatataaaatatttttttaaaag 16713587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 188
Target Start/End: Complemental strand, 36046443 - 36046375
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 188  Q
    ||||||||||||| ||  ||||| |||||||||||| ||| | ||||||||||  |||||||||||||||    
T  36046443 ggtgtgtttggattgagggtttatgaggggaaggga-ggggaggtttacttttgttttttaaattacgga 36046375  T

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Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 29525768 - 29525839
Alignment:
Q  156 gggaatgtttacttttcatttttaaattacggatactatgaa--atattttttaaaaagttaacatattaac 225  Q
    |||| |||| |||||||| ||||||||||| |||||||||||   | ||||||  |||||||||||||||||    
T  29525768 gggagtgttcacttttcaattttaaattactgatactatgaatttttttttttggaaagttaacatattaac 29525839  T

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Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 185
Target Start/End: Original strand, 41841678 - 41841750
Alignment:
Q  113 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 185  Q
    ||||| ||||||||||||| ||   |||||||||| |||||||||||  ||||  ||||| ||||||||||||    
T  41841678 ttttaaggtgtgtttggattgaggatttaggagggaaagggatgggagggtttgattttcttttttaaattac 41841750  T

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Target: scaffold0067 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 113 - 225
Target Start/End: Original strand, 39182 - 39295
Alignment:
Q  113 ttttatggtgtgtttggatggaaagtttaggaggggaaggga-tgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaa 211  Q
    ||||| ||||||||||||||||  ||||||||||||||  ||  ||||  ||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  39182 ttttagggtgtgtttggatggagggtttaggaggggaaatgagggggagggtttacttttcatttttaaattacggacactatgaaatgttttttaaaaa 39281  T
Q  212 gttaacatattaac 225  Q
    ||||||||||||||    
T  39282 gttaacatattaac 39295  T

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Target: scaffold0067; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 188
Target Start/End: Complemental strand, 39432 - 39363
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 188  Q
    ||||||||||||| ||  |||||| |||| |||||| ||||  ||||||||||| |||||||||||||||    
T  39432 ggtgtgtttggattgagggtttagaagggaaagggaggggagggtttacttttcttttttaaattacgga 39363  T

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Target: scaffold0171 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 16173 - 16087
Alignment:
Q  138 tttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaa 224  Q
    ||||||||||||||||| |  |  ||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  16173 tttaggaggggaagggaggaaagagtttatttttcatttttaaattacggatattatgaaatgttttttaaaaagttaacatattaa 16087  T

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Target: scaffold0262 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 123 - 225
Target Start/End: Original strand, 16302 - 16404
Alignment:
Q  123 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatt 222  Q
    ||||||||||||  ||||||||||| || ||| ||||  ||||||||||||||||||||||| | | |||||||||| |||| ||||| |||||||||||    
T  16302 tgtttggatggagggtttaggagggaaaaggaggggagggtttacttttcatttttaaattatgaacactatgaaatgttttataaaacgttaacatatt 16401  T
Q  223 aac 225  Q
    |||    
T  16402 aac 16404  T

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Target: scaffold0198 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 120 - 205
Target Start/End: Original strand, 3150 - 3235
Alignment:
Q  120 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttt 205  Q
    |||||||||||| || ||||||||||||||||||| ||||  ||||||||||| |||||||||||| || |||||||||| |||||    
T  3150 gtgtgtttggattgagagtttaggaggggaagggaggggagagtttacttttcttttttaaattacagacactatgaaatgttttt 3235  T

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Target: scaffold0026 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 156 - 222
Target Start/End: Complemental strand, 1377 - 1311
Alignment:
Q  156 gggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatt 222  Q
    ||||| ||||||||||||||||||||||| | | |||||||||| ||||||||||||||||||||||    
T  1377 gggaaggtttacttttcatttttaaattatgaacactatgaaatgttttttaaaaagttaacatatt 1311  T

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Target: scaffold0026; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 188
Target Start/End: Original strand, 1175 - 1243
Alignment:
Q  120 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 188  Q
    |||||||||||| ||  ||||||||||||||| || ||||  ||||||||||| |||||||||||||||    
T  1175 gtgtgtttggattgagggtttaggaggggaagagaggggagagtttacttttcttttttaaattacgga 1243  T

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Target: scaffold0294 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 116 - 225
Target Start/End: Complemental strand, 15507 - 15399
Alignment:
Q  116 tatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagtta 215  Q
    |||||||||||||||||||  |||||||| |||||||||   ||   | ||||||| |||||||||||||||| |||||| ||| |||||||||| || |    
T  15507 tatggtgtgtttggatggagggtttaggaagggaagggaaatgaggatctactttttatttttaaattacggacactatg-aatgttttttaaaaggtca 15409  T
Q  216 acatattaac 225  Q
    ||||||||||    
T  15408 acatattaac 15399  T

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Target: scaffold0007 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 242456 - 242366
Alignment:
Q  121 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaa 211  Q
    ||||||||||||||  |||||  ||||||||||| ||||  ||||||||||| ||||||||||||||| | ||| ||||  ||||||||||    
T  242456 tgtgtttggatggatggtttataaggggaagggaggggagggtttacttttcttttttaaattacggacattataaaatgatttttaaaaa 242366  T

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Target: scaffold0096 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 6780 - 6719
Alignment:
Q  164 ttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    ||||||||| ||||||||||||| | |||||||||||||||| ||||| |||| ||||||||    
T  6780 ttacttttcgtttttaaattacgcacactatgaaatatttttaaaaaaattaaaatattaac 6719  T

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Target: scaffold0096; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 185
Target Start/End: Original strand, 6581 - 6652
Alignment:
Q  114 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 185  Q
    |||| ||||||||||||| |||  ||||||||| ||||||| ||||  ||||||||||| ||||||||||||    
T  6581 tttagggtgtgtttggattgaagttttaggaggagaagggaggggagggtttacttttcttttttaaattac 6652  T

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Target: scaffold0341 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 18968 - 18905
Alignment:
Q  162 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 225  Q
    |||||||||||||||||||||   ||| |||||||| |||||||||| ||||||| ||||||||    
T  18968 gtttacttttcatttttaaatcgaggacactatgaactattttttaagaagttaatatattaac 18905  T

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Target: scaffold0240 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 17780 - 17716
Alignment:
Q  119 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 185  Q
    ||||||||||||||||  ||||||||| |||||||| |||   ||||||||||| ||||||||||||    
T  17780 ggtgtgtttggatggagggtttaggagtggaagggagggg--ggtttacttttcttttttaaattac 17716  T

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Target: scaffold0012 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 184
Target Start/End: Complemental strand, 184847 - 184784
Alignment:
Q  121 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 184  Q
    ||||||||||||||  ||||||||||| |||||| ||||  ||||||| ||| |||||||||||    
T  184847 tgtgtttggatggagggtttaggagggaaagggaagggagggtttactattcttttttaaatta 184784  T

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