View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8577_high_33 (Length: 202)
Name: NF8577_high_33
Description: NF8577
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8577_high_33 |
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Alignment Details
Target: chr8 (Bit Score: 120; Significance: 1e-61; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 18 - 185
Target Start/End: Complemental strand, 40830068 - 40829901
Alignment:
| Q |
18 |
cacgacacactcacacaaaaaatctatttttgttccataatagtttgtcccataagctaattcatggattccgaattttgtagcttacttttcgagtctt |
117 |
Q |
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| T |
40830068 |
cacgacacatccacacaaaaaatctatttttgttccataatagtttgtcccataagttaattccacttccccgaattttgtagcttacttttcgagtctt |
40829969 |
T |
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| Q |
118 |
tgactcacctcacgaaaatgacatattaggttaccaaggactctatttttgtttattaatatgttttt |
185 |
Q |
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| T |
40829968 |
tgactcacctcacaaaaatgacatattaggttaccaaggactctatttttgtttattaatatcttttt |
40829901 |
T |
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