View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8577_low_46 (Length: 274)
Name: NF8577_low_46
Description: NF8577
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8577_low_46 |
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Alignment Details
Target: chr6 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 5 - 237
Target Start/End: Original strand, 10968859 - 10969091
Alignment:
| Q |
5 |
cacagttgtggaagcagaagaagcaacctagtatggcgaattgattaacaaaagattgtaatgttatagggatattgtttgccccaatcacaagttgttt |
104 |
Q |
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| T |
10968859 |
cacagttgtggaagcagaagaagcaacctagtatggcgaattgattaacaaaagattgtaatgttatagggatattgtttgccccaatcacaagttgttt |
10968958 |
T |
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| Q |
105 |
tattgtctaaaaaatattaaatttaagaatnnnnnnntggtttagaaattgtgattcaaatacctcggtaggatttgtggattggtaatggtgtagaaat |
204 |
Q |
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| T |
10968959 |
tattgtctaaaaaatattaaatttaagaataaaaaaatggtttagaaattgtgattcaaatacctcggtaggatttgtggattggtaatggtgtagaaat |
10969058 |
T |
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| Q |
205 |
ttgtatttgaatatcttggactcctttaactta |
237 |
Q |
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| T |
10969059 |
ttgtatttgaatatcttggactcctttaactta |
10969091 |
T |
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