View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8578_high_16 (Length: 261)
Name: NF8578_high_16
Description: NF8578
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8578_high_16 |
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Alignment Details
Target: chr5 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 11602098 - 11602342
Alignment:
| Q |
1 |
gtgtgctggagaatttgttaaccagaattttctttacttggtagtcttcaagcggaagttgatccgagaactaggcacgcaatgcttgtaaatgtatcac |
100 |
Q |
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| T |
11602098 |
gtgtgctggagaatttgttaaccagaattttctttacttggtagtcttcaagcggaagttgatccgagaactaggcacgcaatgcttgtaaatgtctcac |
11602197 |
T |
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| Q |
101 |
caaataatactataacttggttgtaatgtatgctacatacagttttactttgtttttaccagtacaatgtctatagtcttgtaaaagataaaggaaatta |
200 |
Q |
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| T |
11602198 |
caaataatactataacttggttgtaatgtatgctacatacagttttactttgtttttaccagtacaatgtctatagtcttgtaaaagataaaggaaataa |
11602297 |
T |
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| Q |
201 |
taatgatttgattgtctcaacagaatcaaggtcatggaaacaaaa |
245 |
Q |
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| T |
11602298 |
taatgatttgattgtctcaacagaatcaaggtcatggaaacaaaa |
11602342 |
T |
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