View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8578_low_1 (Length: 676)

Name: NF8578_low_1
Description: NF8578
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8578_low_1
NF8578_low_1
[»] chr7 (10 HSPs)
chr7 (316-609)||(21906357-21906656)
chr7 (44-318)||(21906689-21906973)
chr7 (193-307)||(45429256-45429370)
chr7 (627-656)||(12929372-12929401)
chr7 (627-656)||(12929524-12929553)
chr7 (627-656)||(12930857-12930886)
chr7 (627-656)||(12931008-12931037)
chr7 (627-656)||(23191124-23191153)
chr7 (627-656)||(37563439-37563468)
chr7 (627-656)||(43938164-43938193)
[»] chr5 (17 HSPs)
chr5 (1-115)||(29784943-29785057)
chr5 (439-515)||(29784851-29784927)
chr5 (547-609)||(29784762-29784824)
chr5 (627-658)||(6421705-6421736)
chr5 (192-279)||(32892009-32892096)
chr5 (627-656)||(6421892-6421921)
chr5 (627-656)||(7015593-7015622)
chr5 (627-656)||(8323326-8323355)
chr5 (627-656)||(13064679-13064708)
chr5 (627-656)||(14745533-14745562)
chr5 (627-656)||(14745583-14745612)
chr5 (627-656)||(20704983-20705012)
chr5 (627-656)||(25253171-25253200)
chr5 (627-656)||(25316961-25316990)
chr5 (627-656)||(32052494-32052523)
chr5 (627-656)||(33735583-33735612)
chr5 (627-656)||(37945079-37945108)
[»] chr4 (12 HSPs)
chr4 (192-308)||(31052981-31053097)
chr4 (627-658)||(12691489-12691520)
chr4 (231-305)||(37538113-37538187)
chr4 (627-656)||(12691675-12691704)
chr4 (627-656)||(13872339-13872368)
chr4 (627-656)||(19916741-19916770)
chr4 (627-656)||(22249818-22249847)
chr4 (627-656)||(26601346-26601375)
chr4 (627-656)||(35730733-35730762)
chr4 (627-656)||(47862422-47862451)
chr4 (627-656)||(53559472-53559501)
chr4 (627-656)||(53559657-53559686)
[»] chr3 (10 HSPs)
chr3 (192-314)||(35970436-35970558)
chr3 (627-656)||(1741472-1741501)
chr3 (627-656)||(10749403-10749432)
chr3 (627-656)||(10749589-10749618)
chr3 (627-656)||(11312820-11312849)
chr3 (259-308)||(26848415-26848464)
chr3 (627-656)||(30804118-30804147)
chr3 (627-656)||(33458188-33458217)
chr3 (627-656)||(40256959-40256988)
chr3 (627-656)||(53037297-53037326)
[»] chr8 (18 HSPs)
chr8 (186-312)||(10172406-10172532)
chr8 (627-658)||(547705-547736)
chr8 (627-656)||(20096105-20096134)
chr8 (627-656)||(25287877-25287906)
chr8 (627-656)||(27857012-27857041)
chr8 (627-656)||(29190245-29190274)
chr8 (627-656)||(36623437-36623466)
chr8 (627-656)||(36623623-36623652)
chr8 (627-656)||(37342867-37342896)
chr8 (627-656)||(37343052-37343081)
chr8 (627-656)||(40422245-40422274)
chr8 (627-656)||(40525592-40525621)
chr8 (627-656)||(40525777-40525806)
chr8 (627-656)||(41182166-41182195)
chr8 (627-656)||(43866796-43866825)
chr8 (627-656)||(43866981-43867010)
chr8 (630-658)||(7476-7504)
chr8 (630-658)||(41251206-41251234)
[»] chr6 (12 HSPs)
chr6 (231-313)||(2428031-2428112)
chr6 (627-658)||(13480478-13480509)
chr6 (627-656)||(5064420-5064449)
chr6 (627-656)||(5064605-5064634)
chr6 (627-656)||(13480293-13480322)
chr6 (627-656)||(20561013-20561042)
chr6 (627-656)||(20561197-20561226)
chr6 (627-656)||(22493965-22493994)
chr6 (627-656)||(23291829-23291858)
chr6 (231-292)||(24766035-24766096)
chr6 (627-656)||(26503624-26503653)
chr6 (627-656)||(26542890-26542919)
[»] chr1 (24 HSPs)
chr1 (234-308)||(48252413-48252487)
chr1 (627-658)||(33347499-33347530)
chr1 (193-279)||(35120131-35120217)
chr1 (186-279)||(51587373-51587464)
chr1 (627-656)||(739304-739333)
chr1 (627-656)||(1040383-1040412)
chr1 (627-656)||(1047289-1047318)
chr1 (627-656)||(1047474-1047503)
chr1 (627-656)||(5183591-5183620)
chr1 (627-656)||(5183776-5183805)
chr1 (627-656)||(6056461-6056490)
chr1 (627-656)||(12577282-12577311)
chr1 (627-656)||(19755675-19755704)
chr1 (627-656)||(25414929-25414958)
chr1 (627-656)||(26953186-26953215)
chr1 (627-656)||(26953371-26953400)
chr1 (627-656)||(29980724-29980753)
chr1 (627-656)||(33347686-33347715)
chr1 (627-656)||(46849928-46849957)
chr1 (627-656)||(48380953-48380982)
chr1 (627-656)||(49002961-49002990)
chr1 (627-656)||(49989880-49989909)
chr1 (630-658)||(46364657-46364685)
chr1 (630-658)||(49990069-49990097)
[»] chr2 (13 HSPs)
chr2 (193-318)||(1465743-1465868)
chr2 (231-272)||(15756263-15756304)
chr2 (627-656)||(1150022-1150051)
chr2 (627-656)||(1150207-1150236)
chr2 (164-217)||(1465838-1465891)
chr2 (627-656)||(8089723-8089752)
chr2 (627-656)||(16367048-16367077)
chr2 (627-656)||(16367233-16367262)
chr2 (627-656)||(19607002-19607031)
chr2 (627-656)||(32519425-32519454)
chr2 (627-656)||(45663778-45663807)
chr2 (628-656)||(22731803-22731831)
chr2 (231-279)||(27671330-27671378)
[»] scaffold0321 (2 HSPs)
scaffold0321 (627-658)||(10932-10963)
scaffold0321 (627-656)||(10747-10776)
[»] scaffold0201 (2 HSPs)
scaffold0201 (627-658)||(14163-14194)
scaffold0201 (627-656)||(13978-14007)
[»] scaffold1493 (1 HSPs)
scaffold1493 (627-656)||(863-892)
[»] scaffold0206 (1 HSPs)
scaffold0206 (627-656)||(10410-10439)
[»] scaffold0022 (1 HSPs)
scaffold0022 (630-658)||(120473-120501)


Alignment Details
Target: chr7 (Bit Score: 245; Significance: 1e-135; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 316 - 609
Target Start/End: Complemental strand, 21906656 - 21906357
Alignment:
Q  316 taccaaaatataattgtaagataaatgtaaccacttaattgagtattatcttcagacacgttcatgtaaaaagttgtacactatcatcacatcacaatat 415  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  21906656 taccaaaatagaattgtaagataaatgtaaccacttaattgagtattatcttcatacacgttcatgtaaaaagttgtacactatcatcacatcacaatat 21906557  T
Q  416 tcaatcaatcatatatttggcgtggttatggtaaaagacaaatgattttaattattcaacaattataattgattgacgatgtaaaaactatttagacaaa 515  Q
    |||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21906556 tcaatcaatcatatatttggtgtggttatggtaaaagtgaaatgattttaattattcaacaattataattgattgacgatgtaaaaactatttagacaaa 21906457  T
Q  516 caaaggacatgaatttaaatatttaatccacttatgtgtgaggtttgattttaaggaggaagatgaag------atgatgaaaaagaagtgataggattt 609  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||      ||||||||||||||||||||||||||    
T  21906456 caatggacatgaatttaaatatttaatccacttatgtgtgaggtttgatttcaaggaggaggatgaagatgaagatgatgaaaaagaagtgataggattt 21906357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 44 - 318
Target Start/End: Complemental strand, 21906973 - 21906689
Alignment:
Q  44 ttctagcatatgttgcatatatcttcttccatttgaaaactcatcgaaaaatatttgatgcacaagaggttattactaattatgtaatttcaca------ 137  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  21906973 ttctagcatacgttgcatatatcttcttccatttgaaaactcatcgaaaaatatttgatgcacaagaggttattactaattatgtaatttcacatttgag 21906874  T
Q  138 ----attgtatattgatgtataccaaaggatttaattagtatcctatatcattgtacgattatcttacacatgcatccaatgatactttgctatgttaat 233  Q
        |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| |||||| |||    
T  21906873 cacaattgtatattgatgtataccaaaggatttaattagtatactctatcattgtacgattatcttacacatgcatctaatgatactttactatgtcaat 21906774  T
Q  234 taatgaatatgaaaacacataagttatcatattaattaattgatgtatcatcacatcatagaatgcatgtgtaaagtaatcgtac 318  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  21906773 taatgaatatgaaaacacataagttgtcatattaattaattgatgtatcatcacatcatagaatgtatgtgtaaagtaatcgtac 21906689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 307
Target Start/End: Complemental strand, 45429370 - 45429256
Alignment:
Q  193 ttatcttacacatgcatccaatgatactttgctatgttaattaatgaatatgaaaacacataagttatcatattaattaattgatgtatcatcacatcat 292  Q
    |||| ||||||||||||| ||||||   |||| |||| |||||||||||||||||| | || || | ||| ||| ||||||||| ||| || ||||||||    
T  45429370 ttattttacacatgcatcaaatgatttgttgccatgtcaattaatgaatatgaaaataaatgagatgtcacattcattaattgacgtagcaacacatcat 45429271  T
Q  293 agaatgcatgtgtaa 307  Q
     | ||||||||||||    
T  45429270 tggatgcatgtgtaa 45429256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 12929401 - 12929372
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  12929401 taggaccaaaagtcaaatgattaatatttg 12929372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 12929524 - 12929553
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  12929524 taggaccaaaagtcaaatgattaatatttg 12929553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 12930886 - 12930857
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  12930886 taggaccaaaagtcaaatgattaatatttg 12930857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 12931008 - 12931037
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  12931008 taggaccaaaagtcaaatgattaatatttg 12931037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 23191124 - 23191153
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  23191124 taggaccaaaagtcaaatgattaatatttg 23191153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 37563468 - 37563439
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  37563468 taggaccaaaagtcaaatgattaatatttg 37563439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 43938164 - 43938193
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  43938164 taggaccaaaagtcaaatgattaatatttg 43938193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 4e-46; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 29785057 - 29784943
Alignment:
Q  1 aattttactcttcaattgtcaagagcaagcagtgttgtcatgcttctagcatatgttgcatatatcttcttccatttgaaaactcatcgaaaaatatttg 100  Q
    |||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  29785057 aattctactcttcaattgtcaagagctagcagtgttgttatgcttctagcatatgtttcatatatcttcttccaattgaaaactcatcgaaaaatatttg 29784958  T
Q  101 atgcacaagaggtta 115  Q
    |||||||||||||||    
T  29784957 atgcacaagaggtta 29784943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 439 - 515
Target Start/End: Complemental strand, 29784927 - 29784851
Alignment:
Q  439 ggttatggtaaaagacaaatgattttaattattcaacaattataattgattgacgatgtaaaaactatttagacaaa 515  Q
    ||||||||||| ||||||||| ||||||||||| ||||||||| ||| |||||| ||||||||| |||||| |||||    
T  29784927 ggttatggtaacagacaaatgtttttaattatttaacaattatgattaattgacaatgtaaaaattatttatacaaa 29784851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 547 - 609
Target Start/End: Complemental strand, 29784824 - 29784762
Alignment:
Q  547 ttatgtgtgaggtttgattttaaggaggaagatgaagatgatgaaaaagaagtgataggattt 609  Q
    |||||| || ||||||||||| |||  || ||||||||||||||||||| |||||||||||||    
T  29784824 ttatgtatggggtttgattttcaggtagatgatgaagatgatgaaaaagcagtgataggattt 29784762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 658
Target Start/End: Complemental strand, 6421736 - 6421705
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttgta 658  Q
    ||||||||||||||||||||||||||||||||    
T  6421736 taggaccaaaagtcaaatgattaatatttgta 6421705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 279
Target Start/End: Original strand, 32892009 - 32892096
Alignment:
Q  192 attatcttacacatgcatccaatgatactttgctatgttaattaatgaatatgaaaacacataagttatcatattaattaattgatgt 279  Q
    ||||| ||||||||||||||||| ||   |||   | ||||||||||||||||||||||||| |||| || |||| ||| ||||||||    
T  32892009 attattttacacatgcatccaataatttattgtcgtattaattaatgaatatgaaaacacatgagttgtcgtattcattgattgatgt 32892096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 6421892 - 6421921
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  6421892 taggaccaaaagtcaaatgattaatatttg 6421921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 7015622 - 7015593
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  7015622 taggaccaaaagtcaaatgattaatatttg 7015593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 8323326 - 8323355
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  8323326 taggaccaaaagtcaaatgattaatatttg 8323355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 13064679 - 13064708
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  13064679 taggaccaaaagtcaaatgattaatatttg 13064708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 14745562 - 14745533
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  14745562 taggaccaaaagtcaaatgattaatatttg 14745533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 14745583 - 14745612
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  14745583 taggaccaaaagtcaaatgattaatatttg 14745612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 20704983 - 20705012
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  20704983 taggaccaaaagtcaaatgattaatatttg 20705012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 25253200 - 25253171
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  25253200 taggaccaaaagtcaaatgattaatatttg 25253171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 25316990 - 25316961
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  25316990 taggaccaaaagtcaaatgattaatatttg 25316961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 32052494 - 32052523
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  32052494 taggaccaaaagtcaaatgattaatatttg 32052523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 33735583 - 33735612
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  33735583 taggaccaaaagtcaaatgattaatatttg 33735612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 37945108 - 37945079
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  37945108 taggaccaaaagtcaaatgattaatatttg 37945079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 192 - 308
Target Start/End: Complemental strand, 31053097 - 31052981
Alignment:
Q  192 attatcttacacatgcatccaatgatactttgctatgttaattaatgaatatgaaaacacataagttatcatattaattaattgatgtatcatcacatca 291  Q
    ||||| ||||||||||||||||||||   |||    || ||||||||||||||||||||||  |||| ||||||| |||||| |||||| || |||| ||    
T  31053097 attattttacacatgcatccaatgatgtgttgtcgcgtcaattaatgaatatgaaaacacacgagttgtcatattcattaatcgatgtagcaacacaaca 31052998  T
Q  292 tagaatgcatgtgtaaa 308  Q
    | | |||||||||||||    
T  31052997 ttggatgcatgtgtaaa 31052981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 658
Target Start/End: Complemental strand, 12691520 - 12691489
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttgta 658  Q
    ||||||||||||||||||||||||||||||||    
T  12691520 taggaccaaaagtcaaatgattaatatttgta 12691489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 305
Target Start/End: Original strand, 37538113 - 37538187
Alignment:
Q  231 aattaatgaatatgaaaacacataagttatcatattaattaattgatgtatcatcacatcatagaatgcatgtgt 305  Q
    |||||||||||||||||||| || |||| ||  ||| ||||||||||||  || |||||| | ||||||||||||    
T  37538113 aattaatgaatatgaaaacatatgagttgtcgcattcattaattgatgtcgcaacacatcgttgaatgcatgtgt 37538187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 12691675 - 12691704
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  12691675 taggaccaaaagtcaaatgattaatatttg 12691704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 13872339 - 13872368
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  13872339 taggaccaaaagtcaaatgattaatatttg 13872368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 19916770 - 19916741
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  19916770 taggaccaaaagtcaaatgattaatatttg 19916741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 22249847 - 22249818
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  22249847 taggaccaaaagtcaaatgattaatatttg 22249818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 26601346 - 26601375
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  26601346 taggaccaaaagtcaaatgattaatatttg 26601375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 35730762 - 35730733
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  35730762 taggaccaaaagtcaaatgattaatatttg 35730733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 47862422 - 47862451
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  47862422 taggaccaaaagtcaaatgattaatatttg 47862451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 53559501 - 53559472
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  53559501 taggaccaaaagtcaaatgattaatatttg 53559472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 53559657 - 53559686
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  53559657 taggaccaaaagtcaaatgattaatatttg 53559686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.000000000001; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 314
Target Start/End: Complemental strand, 35970558 - 35970436
Alignment:
Q  192 attatcttacacatgcatccaatgatactttgctatgttaattaatgaatatgaaaacacataagttatcatattaattaattgatgtatcatcacatca 291  Q
    ||||| || |||| |||||||||||||  |||  | || ||||||| ||||||||||||||||||   ||||||| ||||||||| ||  || ||||| |    
T  35970558 attattttgcacacgcatccaatgatatgttgtcacgtcaattaataaatatgaaaacacataagccgtcatattcattaattgacgtgacaacacatga 35970459  T
Q  292 tagaatgcatgtgtaaagtaatc 314  Q
    | ||||||||||||||| |||||    
T  35970458 ttgaatgcatgtgtaaaataatc 35970436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 1741501 - 1741472
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  1741501 taggaccaaaagtcaaatgattaatatttg 1741472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 10749432 - 10749403
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  10749432 taggaccaaaagtcaaatgattaatatttg 10749403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 10749589 - 10749618
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  10749589 taggaccaaaagtcaaatgattaatatttg 10749618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 11312849 - 11312820
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  11312849 taggaccaaaagtcaaatgattaatatttg 11312820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 308
Target Start/End: Complemental strand, 26848464 - 26848415
Alignment:
Q  259 atcatattaattaattgatgtatcatcacatcatagaatgcatgtgtaaa 308  Q
    |||||||| |||||||||||| ||| |||||||| | |||||||||||||    
T  26848464 atcatattcattaattgatgtttcaacacatcattggatgcatgtgtaaa 26848415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 30804118 - 30804147
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  30804118 taggaccaaaagtcaaatgattaatatttg 30804147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 33458188 - 33458217
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  33458188 taggaccaaaagtcaaatgattaatatttg 33458217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 40256988 - 40256959
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  40256988 taggaccaaaagtcaaatgattaatatttg 40256959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 53037297 - 53037326
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  53037297 taggaccaaaagtcaaatgattaatatttg 53037326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000002; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 312
Target Start/End: Complemental strand, 10172532 - 10172406
Alignment:
Q  186 tgtacgattatcttacacatgcatccaatgatactttgctatgttaattaatgaatatgaaaacacataagttatcatattaattaattgatgtatcatc 285  Q
    ||||| ||||| ||||||||||||| |||||| | |||  | || ||||| ||||||||| ||| |||| ||| ||| ||| ||||||||| ||| || |    
T  10172532 tgtacaattattttacacatgcatcaaatgatgcgttgtcacgtcaattagtgaatatgacaactcatatgttttcacattcattaattgacgtaacaac 10172433  T
Q  286 acatcatagaatgcatgtgtaaagtaa 312  Q
    |||| || | ||| |||||||||||||    
T  10172432 acattatcggatgtatgtgtaaagtaa 10172406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 658
Target Start/End: Original strand, 547705 - 547736
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttgta 658  Q
    ||||||||||||||||||||||||||||||||    
T  547705 taggaccaaaagtcaaatgattaatatttgta 547736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 20096134 - 20096105
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  20096134 taggaccaaaagtcaaatgattaatatttg 20096105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 25287906 - 25287877
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  25287906 taggaccaaaagtcaaatgattaatatttg 25287877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 27857012 - 27857041
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  27857012 taggaccaaaagtcaaatgattaatatttg 27857041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 29190274 - 29190245
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  29190274 taggaccaaaagtcaaatgattaatatttg 29190245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 36623466 - 36623437
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  36623466 taggaccaaaagtcaaatgattaatatttg 36623437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 36623623 - 36623652
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  36623623 taggaccaaaagtcaaatgattaatatttg 36623652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 37342896 - 37342867
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  37342896 taggaccaaaagtcaaatgattaatatttg 37342867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 37343052 - 37343081
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  37343052 taggaccaaaagtcaaatgattaatatttg 37343081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 40422274 - 40422245
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  40422274 taggaccaaaagtcaaatgattaatatttg 40422245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 40525621 - 40525592
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  40525621 taggaccaaaagtcaaatgattaatatttg 40525592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 40525777 - 40525806
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  40525777 taggaccaaaagtcaaatgattaatatttg 40525806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 41182166 - 41182195
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  41182166 taggaccaaaagtcaaatgattaatatttg 41182195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 43866825 - 43866796
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  43866825 taggaccaaaagtcaaatgattaatatttg 43866796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 43866981 - 43867010
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  43866981 taggaccaaaagtcaaatgattaatatttg 43867010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 630 - 658
Target Start/End: Complemental strand, 7504 - 7476
Alignment:
Q  630 gaccaaaagtcaaatgattaatatttgta 658  Q
    |||||||||||||||||||||||||||||    
T  7504 gaccaaaagtcaaatgattaatatttgta 7476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 630 - 658
Target Start/End: Complemental strand, 41251234 - 41251206
Alignment:
Q  630 gaccaaaagtcaaatgattaatatttgta 658  Q
    |||||||||||||||||||||||||||||    
T  41251234 gaccaaaagtcaaatgattaatatttgta 41251206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000002; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 313
Target Start/End: Complemental strand, 2428112 - 2428031
Alignment:
Q  231 aattaatgaatatgaaaacacataagttatcatattaattaattgatgtatcatcacatcatagaatgcatgtgtaaagtaat 313  Q
    ||||||||||||||||||||| ||| || ||||||| ||||||||||||   | |||||||||  ||||||||||||| ||||    
T  2428112 aattaatgaatatgaaaacacttaa-ttgtcatattcattaattgatgtgataacacatcataagatgcatgtgtaaaataat 2428031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 658
Target Start/End: Original strand, 13480478 - 13480509
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttgta 658  Q
    ||||||||||||||||||||||||||||||||    
T  13480478 taggaccaaaagtcaaatgattaatatttgta 13480509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 5064449 - 5064420
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  5064449 taggaccaaaagtcaaatgattaatatttg 5064420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 5064605 - 5064634
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  5064605 taggaccaaaagtcaaatgattaatatttg 5064634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 13480322 - 13480293
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  13480322 taggaccaaaagtcaaatgattaatatttg 13480293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 20561042 - 20561013
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  20561042 taggaccaaaagtcaaatgattaatatttg 20561013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 20561197 - 20561226
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  20561197 taggaccaaaagtcaaatgattaatatttg 20561226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 22493994 - 22493965
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  22493994 taggaccaaaagtcaaatgattaatatttg 22493965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 23291858 - 23291829
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  23291858 taggaccaaaagtcaaatgattaatatttg 23291829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 24766096 - 24766035
Alignment:
Q  231 aattaatgaatatgaaaacacataagttatcatattaattaattgatgtatcatcacatcat 292  Q
    ||||||| |||||||||||||||  ||| ||||||| ||||||||||||  || ||||||||    
T  24766096 aattaataaatatgaaaacacatgcgttgtcatattcattaattgatgtggcaacacatcat 24766035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 26503624 - 26503653
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  26503624 taggaccaaaagtcaaatgattaatatttg 26503653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 26542890 - 26542919
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  26542890 taggaccaaaagtcaaatgattaatatttg 26542919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.0000000002; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 308
Target Start/End: Complemental strand, 48252487 - 48252413
Alignment:
Q  234 taatgaatatgaaaacacataagttatcatattaattaattgatgtatcatcacatcatagaatgcatgtgtaaa 308  Q
    |||| |||||||||| |||| |||||||||||| ||||||||||||   | |||||||| ||||| |||||||||    
T  48252487 taataaatatgaaaatacatgagttatcatatttattaattgatgtggaaacacatcattgaatgtatgtgtaaa 48252413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 658
Target Start/End: Complemental strand, 33347530 - 33347499
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttgta 658  Q
    ||||||||||||||||||||||||||||||||    
T  33347530 taggaccaaaagtcaaatgattaatatttgta 33347499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 193 - 279
Target Start/End: Complemental strand, 35120217 - 35120131
Alignment:
Q  193 ttatcttacacatgcatccaatgatactttgctatgttaattaatgaatatgaaaacacataagttatcatattaattaattgatgt 279  Q
    |||| ||||||||||||||||||||   |||| |||| ||||||| |||| || ||| | || ||| ||||||| ||||||||||||    
T  35120217 ttattttacacatgcatccaatgatgtattgccatgtcaattaataaatacgacaactcgtatgttttcatattcattaattgatgt 35120131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 279
Target Start/End: Original strand, 51587373 - 51587464
Alignment:
Q  186 tgtacgattatcttacacatgcatccaatgatactttgctatgttaattaatgaatatgaaaacacataagttatcatattaattaattgatgt 279  Q
    ||||| ||||| ||||||||||||| ||  ||   |||||| || ||||||||||||||||||||||| ||||  |||||  ||||||||||||    
T  51587373 tgtacaattattttacacatgcatcaaacaatgtgttgctacgtcaattaatgaatatgaaaacacatgagttgacatat--attaattgatgt 51587464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 739333 - 739304
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  739333 taggaccaaaagtcaaatgattaatatttg 739304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 1040412 - 1040383
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  1040412 taggaccaaaagtcaaatgattaatatttg 1040383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 1047318 - 1047289
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  1047318 taggaccaaaagtcaaatgattaatatttg 1047289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 1047474 - 1047503
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  1047474 taggaccaaaagtcaaatgattaatatttg 1047503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 5183620 - 5183591
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  5183620 taggaccaaaagtcaaatgattaatatttg 5183591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 5183776 - 5183805
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  5183776 taggaccaaaagtcaaatgattaatatttg 5183805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 6056490 - 6056461
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  6056490 taggaccaaaagtcaaatgattaatatttg 6056461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 12577282 - 12577311
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  12577282 taggaccaaaagtcaaatgattaatatttg 12577311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 19755675 - 19755704
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  19755675 taggaccaaaagtcaaatgattaatatttg 19755704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 25414958 - 25414929
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  25414958 taggaccaaaagtcaaatgattaatatttg 25414929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 26953215 - 26953186
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  26953215 taggaccaaaagtcaaatgattaatatttg 26953186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 26953371 - 26953400
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  26953371 taggaccaaaagtcaaatgattaatatttg 26953400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 29980753 - 29980724
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  29980753 taggaccaaaagtcaaatgattaatatttg 29980724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 33347686 - 33347715
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  33347686 taggaccaaaagtcaaatgattaatatttg 33347715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 46849928 - 46849957
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  46849928 taggaccaaaagtcaaatgattaatatttg 46849957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 48380953 - 48380982
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  48380953 taggaccaaaagtcaaatgattaatatttg 48380982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 49002990 - 49002961
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  49002990 taggaccaaaagtcaaatgattaatatttg 49002961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 49989909 - 49989880
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  49989909 taggaccaaaagtcaaatgattaatatttg 49989880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 630 - 658
Target Start/End: Complemental strand, 46364685 - 46364657
Alignment:
Q  630 gaccaaaagtcaaatgattaatatttgta 658  Q
    |||||||||||||||||||||||||||||    
T  46364685 gaccaaaagtcaaatgattaatatttgta 46364657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 630 - 658
Target Start/End: Original strand, 49990069 - 49990097
Alignment:
Q  630 gaccaaaagtcaaatgattaatatttgta 658  Q
    |||||||||||||||||||||||||||||    
T  49990069 gaccaaaagtcaaatgattaatatttgta 49990097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.000000001; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 318
Target Start/End: Original strand, 1465743 - 1465868
Alignment:
Q  193 ttatcttacacatgcatccaatgatactttgctatgttaattaatgaatatgaaaacacataagttatcatattaattaattgatgtatcatcacatcat 292  Q
    |||| ||||||||||||||||||||   |||  | || ||||||| ||||||||||||||  |||| ||||||| || || ||||||   | ||||||||    
T  1465743 ttattttacacatgcatccaatgatgtgttgtcacgtcaattaataaatatgaaaacacacgagttgtcatattgatcaaatgatgtggaaacacatcat 1465842  T
Q  293 agaatgcatgtgtaaagtaatcgtac 318  Q
     | ||||||||||||| |||| ||||    
T  1465843 tggatgcatgtgtaaaataattgtac 1465868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 231 - 272
Target Start/End: Original strand, 15756263 - 15756304
Alignment:
Q  231 aattaatgaatatgaaaacacataagttatcatattaattaa 272  Q
    |||||||||||||||||||||||||||| ||||||| |||||    
T  15756263 aattaatgaatatgaaaacacataagttctcatattcattaa 15756304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 1150051 - 1150022
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  1150051 taggaccaaaagtcaaatgattaatatttg 1150022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 1150207 - 1150236
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  1150207 taggaccaaaagtcaaatgattaatatttg 1150236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 1465891 - 1465838
Alignment:
Q  164 tttaattagtatcctatatcattgtacgattatcttacacatgcatccaatgat 217  Q
    |||||||||||| ||  |||| ||||| ||||| ||||||||||||||||||||    
T  1465891 tttaattagtatactcgatcagtgtacaattattttacacatgcatccaatgat 1465838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 8089723 - 8089752
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  8089723 taggaccaaaagtcaaatgattaatatttg 8089752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 16367077 - 16367048
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  16367077 taggaccaaaagtcaaatgattaatatttg 16367048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 16367233 - 16367262
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  16367233 taggaccaaaagtcaaatgattaatatttg 16367262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 19607031 - 19607002
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  19607031 taggaccaaaagtcaaatgattaatatttg 19607002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 32519425 - 32519454
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  32519425 taggaccaaaagtcaaatgattaatatttg 32519454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 45663778 - 45663807
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  45663778 taggaccaaaagtcaaatgattaatatttg 45663807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 628 - 656
Target Start/End: Original strand, 22731803 - 22731831
Alignment:
Q  628 aggaccaaaagtcaaatgattaatatttg 656  Q
    |||||||||||||||||||||||||||||    
T  22731803 aggaccaaaagtcaaatgattaatatttg 22731831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 231 - 279
Target Start/End: Complemental strand, 27671378 - 27671330
Alignment:
Q  231 aattaatgaatatgaaaacacataagttatcatattaattaattgatgt 279  Q
    ||||||||||||||||| ||||| |||||| ||||| ||||||| ||||    
T  27671378 aattaatgaatatgaaagcacatgagttattatattcattaatttatgt 27671330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 32; Significance: 0.00000002; HSPs: 2)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 658
Target Start/End: Original strand, 10932 - 10963
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttgta 658  Q
    ||||||||||||||||||||||||||||||||    
T  10932 taggaccaaaagtcaaatgattaatatttgta 10963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 10776 - 10747
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  10776 taggaccaaaagtcaaatgattaatatttg 10747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 32; Significance: 0.00000002; HSPs: 2)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 658
Target Start/End: Original strand, 14163 - 14194
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttgta 658  Q
    ||||||||||||||||||||||||||||||||    
T  14163 taggaccaaaagtcaaatgattaatatttgta 14194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 14007 - 13978
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  14007 taggaccaaaagtcaaatgattaatatttg 13978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1493
Description:

Target: scaffold1493; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 863 - 892
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  863 taggaccaaaagtcaaatgattaatatttg 892  T

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Target: scaffold0206 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 656
Target Start/End: Complemental strand, 10439 - 10410
Alignment:
Q  627 taggaccaaaagtcaaatgattaatatttg 656  Q
    ||||||||||||||||||||||||||||||    
T  10439 taggaccaaaagtcaaatgattaatatttg 10410  T

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Target: scaffold0022 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 630 - 658
Target Start/End: Original strand, 120473 - 120501
Alignment:
Q  630 gaccaaaagtcaaatgattaatatttgta 658  Q
    |||||||||||||||||||||||||||||    
T  120473 gaccaaaagtcaaatgattaatatttgta 120501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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