View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8579_high_3 (Length: 327)
Name: NF8579_high_3
Description: NF8579
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8579_high_3 |
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Alignment Details
Target: chr8 (Bit Score: 311; Significance: 1e-175; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 1 - 322
Target Start/End: Complemental strand, 14461136 - 14460814
Alignment:
| Q |
1 |
gtttgagagaaaactgaatattctgaaaatgataaaactgaatctacctctgccacagcaatctatttatcaatgcaaagtctagttcaacaaactaagg |
100 |
Q |
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| T |
14461136 |
gtttgagagaaaactgaatattctgaaaatgataaaactgaatctacctctgccacagcaatctatttatcaatgcaaagtctagttcaacaaactaagg |
14461037 |
T |
|
| Q |
101 |
ctgtctcaactgctcaagagaaagttatctgacagctgtaaaatagctggca-taaccgcaataccagttggcacaaactaacaacggcaaatagagtag |
199 |
Q |
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| T |
14461036 |
ctgtctcaactgctcaagagaaagttatctgacagctgtaaaatagctggcagtaaccgcaataccagttggcacaaactaacaacggcaaatagagtag |
14460937 |
T |
|
| Q |
200 |
tgcagtgaataaaaattagtgcacctattacagagaaaatgccttctcttacagccagtaagatcaaacacaatggattaagaaggttgtatccttcttg |
299 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14460936 |
tgcagtgaataaaaattagtgcacctattacagagaaaatgccttctcttacagccagtaagatcaaacacaatggattaagaaggttgtatccttcttg |
14460837 |
T |
|
| Q |
300 |
tatcaaaatctaatgatgtccat |
322 |
Q |
| |
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|||||||||||||||| |||||| |
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| T |
14460836 |
tatcaaaatctaatgaagtccat |
14460814 |
T |
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