View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8580_high_46 (Length: 214)
Name: NF8580_high_46
Description: NF8580
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8580_high_46 |
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Alignment Details
Target: chr7 (Bit Score: 164; Significance: 8e-88; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 22199999 - 22199800
Alignment:
| Q |
1 |
gaacatataaatacattatacagtagttacttgaatatttgaacactgacaaccaaataattatatgacaattttggtgagttatagttatgtcattgta |
100 |
Q |
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||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |
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| T |
22199999 |
gaacatataaacacattatacagtaattacttaaatatttgaacactgacaaccaaataattttatgacatttttggtgagttatagttatgtcattgta |
22199900 |
T |
|
| Q |
101 |
caaatacaaacaaggacagtgtgaagtcttttgcaatgaaagattgaatacacccttttcaccaatgtcatgtctcatggctccttccattggacccttt |
200 |
Q |
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|||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
22199899 |
caaatacaaacaagtacagtgtgatgtcttttgcaatgaaagattgaatacaaccttttcaccaatgtcatgtgtcatggctccttccattggacccttt |
22199800 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 22237822 - 22238021
Alignment:
| Q |
1 |
gaacatataaatacattatacagtagttacttgaatatttgaacactgacaaccaaataattatatgacaattttggtgagttatagttatgtcattgta |
100 |
Q |
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||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |
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| T |
22237822 |
gaacatataaacacattatacagtaattacttaaatatttgaacactgacaaccaaataattttatgacatttttggtgagttatagttatgtcattgta |
22237921 |
T |
|
| Q |
101 |
caaatacaaacaaggacagtgtgaagtcttttgcaatgaaagattgaatacacccttttcaccaatgtcatgtctcatggctccttccattggacccttt |
200 |
Q |
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|||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
22237922 |
caaatacaaacaagtacagtgtgatgtcttttgcaatgaaagattgaatacaaccttttcaccaatgtcatgtgtcatggctccttccattggacccttt |
22238021 |
T |
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