View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8580_low_29 (Length: 315)

Name: NF8580_low_29
Description: NF8580
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8580_low_29
NF8580_low_29
[»] chr3 (65 HSPs)
chr3 (1-306)||(220484-220798)
chr3 (1-158)||(24560217-24560374)
chr3 (1-143)||(30200175-30200320)
chr3 (1-158)||(21773782-21773939)
chr3 (3-158)||(41110410-41110565)
chr3 (15-160)||(28582610-28582755)
chr3 (1-123)||(37102236-37102358)
chr3 (6-152)||(14897982-14898128)
chr3 (8-158)||(25655064-25655216)
chr3 (11-152)||(46204892-46205033)
chr3 (2-142)||(27542019-27542159)
chr3 (8-142)||(18654694-18654829)
chr3 (3-127)||(41040039-41040163)
chr3 (1-124)||(2387847-2387970)
chr3 (3-152)||(9312560-9312707)
chr3 (3-81)||(16275794-16275872)
chr3 (1-106)||(55327422-55327527)
chr3 (3-107)||(52473966-52474070)
chr3 (37-120)||(651769-651852)
chr3 (4-78)||(36568993-36569067)
chr3 (20-158)||(41414078-41414216)
chr3 (3-112)||(52185061-52185171)
chr3 (1-117)||(43005826-43005942)
chr3 (1-109)||(37807129-37807237)
chr3 (1-123)||(46556178-46556302)
chr3 (20-156)||(10943720-10943856)
chr3 (33-152)||(21090190-21090309)
chr3 (86-160)||(24253894-24253968)
chr3 (19-148)||(40463976-40464105)
chr3 (4-152)||(12790379-12790526)
chr3 (86-158)||(34641162-34641234)
chr3 (1-107)||(10748377-10748490)
chr3 (5-62)||(13082953-13083010)
chr3 (36-152)||(6803323-6803439)
chr3 (86-145)||(26135969-26136028)
chr3 (36-107)||(54574483-54574554)
chr3 (26-152)||(17474318-17474444)
chr3 (26-152)||(26135808-26135929)
chr3 (20-142)||(44412377-44412499)
chr3 (86-152)||(55428551-55428617)
chr3 (91-161)||(24560394-24560464)
chr3 (33-123)||(25179929-25180019)
chr3 (33-123)||(48683647-48683737)
chr3 (20-109)||(40858614-40858703)
chr3 (20-152)||(16884077-16884209)
chr3 (20-123)||(34641027-34641130)
chr3 (90-152)||(10943620-10943682)
chr3 (86-152)||(41110327-41110393)
chr3 (33-118)||(27197768-27197853)
chr3 (91-152)||(28581192-28581253)
chr3 (17-74)||(51819228-51819285)
chr3 (45-81)||(31684363-31684399)
chr3 (20-111)||(54996786-54996874)
chr3 (36-158)||(24253721-24253844)
chr3 (36-123)||(46978462-46978549)
chr3 (86-160)||(18654598-18654672)
chr3 (91-137)||(25654991-25655037)
chr3 (33-123)||(42699731-42699821)
chr3 (92-161)||(36568901-36568969)
chr3 (91-152)||(42772050-42772111)
chr3 (93-158)||(46205071-46205136)
chr3 (91-140)||(52474092-52474141)
chr3 (98-158)||(8432261-8432321)
chr3 (93-161)||(25499074-25499142)
chr3 (45-81)||(31894019-31894055)
[»] chr8 (63 HSPs)
chr8 (4-160)||(31543162-31543318)
chr8 (3-160)||(7503043-7503200)
chr8 (1-152)||(1281149-1281300)
chr8 (1-158)||(9718566-9718723)
chr8 (1-141)||(11575493-11575633)
chr8 (4-120)||(16652987-16653103)
chr8 (5-158)||(1026940-1027092)
chr8 (10-152)||(7979146-7979288)
chr8 (1-123)||(11785561-11785683)
chr8 (1-160)||(11033417-11033574)
chr8 (1-142)||(28083758-28083899)
chr8 (1-161)||(33922522-33922677)
chr8 (5-160)||(2248450-2248605)
chr8 (1-112)||(37032425-37032536)
chr8 (1-158)||(40990271-40990427)
chr8 (3-112)||(42650422-42650534)
chr8 (1-152)||(30479804-30479955)
chr8 (4-158)||(6315066-6315216)
chr8 (10-142)||(13404992-13405124)
chr8 (20-158)||(12022249-12022387)
chr8 (19-117)||(41103611-41103709)
chr8 (1-114)||(30664405-30664518)
chr8 (8-141)||(31738440-31738573)
chr8 (5-124)||(36308876-36308996)
chr8 (27-152)||(10028116-10028241)
chr8 (18-142)||(3726959-3727083)
chr8 (1-158)||(4247604-4247764)
chr8 (5-107)||(29358430-29358532)
chr8 (86-160)||(43732859-43732933)
chr8 (1-141)||(37923165-37923306)
chr8 (4-107)||(29691012-29691118)
chr8 (1-74)||(35694842-35694915)
chr8 (86-161)||(8815138-8815213)
chr8 (91-158)||(31543072-31543139)
chr8 (89-146)||(11033593-11033650)
chr8 (91-152)||(36309020-36309081)
chr8 (36-76)||(34633819-34633859)
chr8 (33-152)||(20472811-20472930)
chr8 (36-160)||(30365128-30365252)
chr8 (70-158)||(43732679-43732767)
chr8 (33-160)||(8671913-8672040)
chr8 (36-158)||(8815263-8815385)
chr8 (20-158)||(9933240-9933379)
chr8 (91-161)||(12022139-12022210)
chr8 (20-134)||(30581916-30582033)
chr8 (86-160)||(3726861-3726935)
chr8 (98-152)||(16024337-16024391)
chr8 (86-160)||(31738595-31738669)
chr8 (33-119)||(38198168-38198253)
chr8 (91-152)||(7394638-7394699)
chr8 (19-152)||(24243152-24243284)
chr8 (94-158)||(41103504-41103568)
chr8 (118-161)||(2481977-2482020)
chr8 (86-161)||(11785698-11785773)
chr8 (91-158)||(30365307-30365374)
chr8 (98-161)||(34196492-34196554)
chr8 (20-161)||(16024150-16024292)
chr8 (86-127)||(1281315-1281356)
chr8 (20-77)||(27487071-27487128)
chr8 (33-77)||(27483641-27483685)
chr8 (1-41)||(34634260-34634300)
chr8 (33-113)||(36166209-36166288)
chr8 (104-160)||(40632994-40633050)
[»] chr1 (51 HSPs)
chr1 (1-161)||(30010329-30010489)
chr1 (1-139)||(2859019-2859157)
chr1 (3-160)||(32951407-32951564)
chr1 (3-160)||(35349551-35349708)
chr1 (1-141)||(38509981-38510121)
chr1 (3-158)||(41498404-41498559)
chr1 (1-152)||(51597674-51597825)
chr1 (1-158)||(12234010-12234167)
chr1 (3-158)||(40095022-40095178)
chr1 (1-142)||(10391888-10392029)
chr1 (1-123)||(8529834-8529956)
chr1 (1-123)||(50744368-50744490)
chr1 (1-138)||(42230559-42230695)
chr1 (5-152)||(49946679-49946826)
chr1 (1-79)||(7444574-7444652)
chr1 (5-107)||(26940934-26941036)
chr1 (1-81)||(36285661-36285741)
chr1 (5-112)||(45585776-45585883)
chr1 (3-123)||(44210994-44211114)
chr1 (33-160)||(1085609-1085736)
chr1 (14-123)||(2470831-2470944)
chr1 (33-161)||(33643265-33643393)
chr1 (10-74)||(41676363-41676427)
chr1 (86-161)||(40094930-40095005)
chr1 (1-107)||(6563628-6563733)
chr1 (86-152)||(35512969-35513035)
chr1 (20-158)||(35927814-35927951)
chr1 (86-160)||(41498576-41498651)
chr1 (86-152)||(12234182-12234248)
chr1 (86-158)||(20607388-20607461)
chr1 (91-159)||(2858931-2858999)
chr1 (86-142)||(7444494-7444550)
chr1 (86-158)||(30010504-30010576)
chr1 (33-152)||(40709411-40709529)
chr1 (86-160)||(38509892-38509966)
chr1 (86-158)||(1085489-1085562)
chr1 (1-52)||(20576218-20576269)
chr1 (91-146)||(25268441-25268496)
chr1 (36-139)||(49832566-49832669)
chr1 (65-158)||(26324014-26324112)
chr1 (33-138)||(43553049-43553155)
chr1 (91-160)||(35927989-35928058)
chr1 (91-160)||(40709290-40709359)
chr1 (33-109)||(25268313-25268389)
chr1 (86-161)||(20576130-20576205)
chr1 (94-152)||(23536786-23536844)
chr1 (33-123)||(51303695-51303784)
chr1 (36-160)||(525221-525346)
chr1 (86-158)||(35349466-35349536)
chr1 (20-73)||(42742416-42742469)
chr1 (86-122)||(44210943-44210979)
[»] chr5 (69 HSPs)
chr5 (1-158)||(7544136-7544293)
chr5 (1-158)||(13634711-13634868)
chr5 (3-158)||(26414893-26415048)
chr5 (1-123)||(9856915-9857037)
chr5 (1-160)||(16938477-16938636)
chr5 (21-152)||(2550459-2550590)
chr5 (5-160)||(4373657-4373812)
chr5 (1-127)||(28279563-28279690)
chr5 (1-123)||(10072734-10072856)
chr5 (1-152)||(36363038-36363189)
chr5 (5-152)||(16501881-16502030)
chr5 (1-127)||(9798699-9798825)
chr5 (3-152)||(36392239-36392387)
chr5 (3-112)||(37551454-37551562)
chr5 (3-112)||(37606941-37607049)
chr5 (3-112)||(37654284-37654392)
chr5 (21-158)||(40815297-40815433)
chr5 (12-142)||(10476042-10476174)
chr5 (1-162)||(42681444-42681610)
chr5 (11-152)||(11756884-11757024)
chr5 (3-112)||(37779151-37779258)
chr5 (1-96)||(8502922-8503017)
chr5 (86-160)||(33744191-33744265)
chr5 (41-151)||(10650434-10650546)
chr5 (32-152)||(22022853-22022976)
chr5 (86-158)||(14245088-14245160)
chr5 (1-81)||(17024311-17024391)
chr5 (1-158)||(20146953-20147114)
chr5 (1-152)||(14681476-14681625)
chr5 (86-161)||(34980982-34981057)
chr5 (24-158)||(10204576-10204710)
chr5 (86-152)||(1657985-1658051)
chr5 (33-158)||(15986743-15986868)
chr5 (33-158)||(40305784-40305909)
chr5 (20-139)||(10043271-10043390)
chr5 (1-158)||(20513532-20513681)
chr5 (36-152)||(34980816-34980932)
chr5 (36-123)||(5688448-5688535)
chr5 (86-161)||(14245218-14245293)
chr5 (95-161)||(10204757-10204823)
chr5 (91-157)||(13634888-13634954)
chr5 (95-161)||(15986621-15986687)
chr5 (91-160)||(10476205-10476274)
chr5 (59-112)||(11419306-11419359)
chr5 (91-138)||(10043429-10043476)
chr5 (54-127)||(43407-43481)
chr5 (86-152)||(7544308-7544374)
chr5 (86-152)||(11436945-11437011)
chr5 (86-152)||(11757075-11757141)
chr5 (38-124)||(13298300-13298386)
chr5 (36-159)||(14684604-14684729)
chr5 (20-142)||(33744299-33744421)
chr5 (89-158)||(12035936-12036005)
chr5 (91-152)||(36363209-36363270)
chr5 (28-101)||(39966066-39966139)
chr5 (20-152)||(8551524-8551656)
chr5 (34-126)||(21580979-21581071)
chr5 (12-84)||(29002304-29002376)
chr5 (91-158)||(16938656-16938723)
chr5 (86-152)||(21581119-21581185)
chr5 (86-161)||(28279473-28279548)
chr5 (94-161)||(37551585-37551652)
chr5 (94-161)||(37654415-37654482)
chr5 (118-161)||(40305667-40305710)
chr5 (4-42)||(22023483-22023521)
chr5 (86-120)||(35176831-35176865)
chr5 (91-152)||(9798618-9798679)
chr5 (1-66)||(27110120-27110185)
chr5 (113-161)||(5688589-5688637)
[»] chr2 (69 HSPs)
chr2 (1-160)||(36347628-36347787)
chr2 (1-158)||(15224781-15224938)
chr2 (1-123)||(23748130-23748252)
chr2 (3-160)||(39732818-39732974)
chr2 (5-136)||(2241432-2241563)
chr2 (33-160)||(35736173-35736300)
chr2 (3-152)||(36566940-36567090)
chr2 (1-141)||(39821686-39821826)
chr2 (1-123)||(19566908-19567030)
chr2 (1-112)||(28262530-28262641)
chr2 (18-152)||(8426975-8427109)
chr2 (1-112)||(9631603-9631717)
chr2 (1-124)||(12541799-12541923)
chr2 (1-152)||(36046291-36046439)
chr2 (1-107)||(40022421-40022529)
chr2 (33-158)||(41778773-41778898)
chr2 (6-138)||(9427005-9427137)
chr2 (1-81)||(16565854-16565934)
chr2 (4-107)||(37739981-37740085)
chr2 (1-73)||(17379897-17379969)
chr2 (20-152)||(3094459-3094591)
chr2 (20-160)||(31795875-31796010)
chr2 (26-152)||(41841688-41841814)
chr2 (9-114)||(6721717-6721822)
chr2 (6-112)||(29525823-29525931)
chr2 (1-62)||(34209560-34209621)
chr2 (20-160)||(42296409-42296549)
chr2 (33-142)||(886934-887041)
chr2 (33-160)||(21662328-21662456)
chr2 (33-158)||(45257307-45257432)
chr2 (1-57)||(42316851-42316907)
chr2 (20-158)||(31061359-31061497)
chr2 (86-152)||(31795775-31795841)
chr2 (5-74)||(12751899-12751968)
chr2 (36-124)||(2381109-2381197)
chr2 (94-158)||(23748275-23748339)
chr2 (4-112)||(39354264-39354372)
chr2 (33-151)||(1270396-1270515)
chr2 (97-152)||(31061543-31061598)
chr2 (91-146)||(40022550-40022605)
chr2 (19-73)||(18811413-18811467)
chr2 (86-160)||(22356176-22356250)
chr2 (3-81)||(32503236-32503314)
chr2 (92-158)||(35736365-35736431)
chr2 (59-136)||(27926590-27926667)
chr2 (33-142)||(33265623-33265731)
chr2 (91-160)||(45257484-45257553)
chr2 (97-141)||(1052771-1052815)
chr2 (28-107)||(7681299-7681378)
chr2 (52-111)||(9591973-9592032)
chr2 (36-142)||(17333933-17334040)
chr2 (36-122)||(22356001-22356087)
chr2 (36-158)||(34187575-34187697)
chr2 (2-43)||(27926668-27926709)
chr2 (20-64)||(887210-887254)
chr2 (91-139)||(887287-887335)
chr2 (86-158)||(9631732-9631804)
chr2 (86-145)||(8426892-8426951)
chr2 (95-142)||(17331431-17331478)
chr2 (114-161)||(17379843-17379890)
chr2 (86-157)||(36046205-36046276)
chr2 (91-158)||(42813797-42813864)
chr2 (103-152)||(12541951-12541999)
chr2 (19-68)||(20545799-20545848)
chr2 (94-161)||(2380989-2381057)
chr2 (86-158)||(17380013-17380085)
chr2 (86-134)||(36566874-36566922)
chr2 (91-139)||(42296322-42296370)
chr2 (20-84)||(45098243-45098307)
[»] chr7 (65 HSPs)
chr7 (1-152)||(33655195-33655346)
chr7 (4-161)||(34228408-34228566)
chr7 (1-158)||(1051586-1051742)
chr7 (1-160)||(47390853-47391013)
chr7 (5-160)||(25887190-25887345)
chr7 (1-127)||(41497044-41497170)
chr7 (3-158)||(13771035-13771190)
chr7 (33-158)||(39855984-39856109)
chr7 (1-107)||(24970252-24970358)
chr7 (3-124)||(40196621-40196741)
chr7 (5-152)||(41008188-41008334)
chr7 (5-126)||(43230268-43230389)
chr7 (3-112)||(34235096-34235206)
chr7 (15-157)||(31571569-31571713)
chr7 (3-123)||(37417722-37417842)
chr7 (1-123)||(17852906-17853028)
chr7 (10-152)||(26365773-26365916)
chr7 (11-77)||(22163206-22163272)
chr7 (11-77)||(22221914-22221980)
chr7 (3-152)||(23029429-23029567)
chr7 (36-158)||(37925841-37925963)
chr7 (20-152)||(33519054-33519186)
chr7 (5-107)||(40572325-40572427)
chr7 (1-107)||(42306385-42306487)
chr7 (20-108)||(38378095-38378183)
chr7 (36-160)||(39646467-39646591)
chr7 (91-158)||(4833531-4833598)
chr7 (3-86)||(4833620-4833703)
chr7 (52-123)||(10315648-10315719)
chr7 (91-158)||(18231763-18231830)
chr7 (86-161)||(41496954-41497029)
chr7 (91-161)||(33519225-33519295)
chr7 (91-161)||(36267550-36267620)
chr7 (86-160)||(48881556-48881630)
chr7 (20-152)||(35421970-35422102)
chr7 (1-72)||(10315719-10315790)
chr7 (5-67)||(13425211-13425273)
chr7 (1-51)||(18231693-18231743)
chr7 (20-127)||(18063667-18063772)
chr7 (36-161)||(37620771-37620896)
chr7 (15-88)||(45940757-45940830)
chr7 (10-112)||(48152030-48152127)
chr7 (1-72)||(32872868-32872939)
chr7 (1-112)||(42087041-42087152)
chr7 (86-160)||(13770946-13771020)
chr7 (86-152)||(37620946-37621012)
chr7 (86-160)||(40196530-40196604)
chr7 (33-158)||(36267672-36267797)
chr7 (92-161)||(40282194-40282263)
chr7 (86-158)||(28074103-28074175)
chr7 (20-107)||(18795701-18795788)
chr7 (33-103)||(3215979-3216049)
chr7 (39-137)||(8122165-8122263)
chr7 (95-142)||(47229998-47230047)
chr7 (2-55)||(47229920-47229973)
chr7 (52-141)||(48013520-48013608)
chr7 (86-158)||(47391028-47391100)
chr7 (91-123)||(48094070-48094102)
chr7 (19-66)||(20393693-20393740)
chr7 (91-146)||(30592265-30592320)
chr7 (15-66)||(30891096-30891147)
chr7 (33-107)||(3143531-3143605)
chr7 (91-141)||(25887370-25887420)
chr7 (61-111)||(37561869-37561919)
chr7 (91-160)||(16833875-16833944)
[»] chr4 (68 HSPs)
chr4 (1-158)||(31348408-31348565)
chr4 (1-160)||(45741888-45742047)
chr4 (5-158)||(1968450-1968603)
chr4 (1-161)||(46007788-46007948)
chr4 (1-158)||(54935067-54935226)
chr4 (1-143)||(49735555-49735696)
chr4 (8-160)||(26166935-26167087)
chr4 (1-142)||(16400816-16400957)
chr4 (1-158)||(54320435-54320591)
chr4 (1-152)||(27735751-27735902)
chr4 (5-106)||(35248738-35248839)
chr4 (1-161)||(47433796-47433956)
chr4 (1-106)||(41174397-41174502)
chr4 (15-127)||(37711174-37711286)
chr4 (8-142)||(5730924-5731059)
chr4 (1-142)||(24565433-24565572)
chr4 (5-102)||(36151632-36151729)
chr4 (1-160)||(45132588-45132741)
chr4 (10-152)||(2247899-2248039)
chr4 (1-158)||(29798288-29798442)
chr4 (17-158)||(56135749-56135890)
chr4 (4-156)||(6891362-6891514)
chr4 (9-114)||(44784036-44784141)
chr4 (20-152)||(47846161-47846294)
chr4 (1-158)||(17938194-17938352)
chr4 (26-160)||(22920979-22921114)
chr4 (26-160)||(22970685-22970820)
chr4 (12-101)||(2917061-2917150)
chr4 (14-114)||(28332848-28332948)
chr4 (33-160)||(17182604-17182731)
chr4 (33-124)||(55510204-55510295)
chr4 (86-161)||(54935241-54935316)
chr4 (33-158)||(21695008-21695132)
chr4 (20-109)||(43961459-43961548)
chr4 (86-160)||(37711295-37711369)
chr4 (20-109)||(34995100-34995189)
chr4 (20-152)||(47846369-47846501)
chr4 (86-158)||(49735468-49735540)
chr4 (86-161)||(37761636-37761711)
chr4 (86-152)||(54576333-54576399)
chr4 (87-152)||(4437431-4437496)
chr4 (86-143)||(21694905-21694962)
chr4 (1-66)||(34110897-34110962)
chr4 (20-160)||(47694347-47694487)
chr4 (36-160)||(22186717-22186841)
chr4 (91-163)||(34995226-34995298)
chr4 (86-146)||(35248858-35248918)
chr4 (86-158)||(41174517-41174589)
chr4 (91-158)||(5825073-5825140)
chr4 (20-158)||(7977602-7977741)
chr4 (33-123)||(4437544-4437633)
chr4 (83-137)||(6938302-6938356)
chr4 (91-161)||(44145770-44145840)
chr4 (86-160)||(54320606-54320680)
chr4 (27-73)||(54494723-54494769)
chr4 (86-146)||(17938119-17938179)
chr4 (86-158)||(45742062-45742134)
chr4 (91-158)||(6938424-6938491)
chr4 (86-160)||(31348314-31348393)
chr4 (89-160)||(36151750-36151820)
chr4 (109-160)||(49735687-49735738)
chr4 (86-160)||(5730828-5730902)
chr4 (86-152)||(27735917-27735983)
chr4 (20-73)||(14539357-14539410)
chr4 (90-123)||(17182518-17182551)
chr4 (36-137)||(29993893-29993994)
chr4 (117-158)||(53260718-53260759)
chr4 (20-152)||(55080585-55080717)
[»] chr6 (54 HSPs)
chr6 (1-152)||(30487392-30487543)
chr6 (1-160)||(33235949-33236108)
chr6 (1-142)||(31849126-31849267)
chr6 (1-152)||(4097599-4097751)
chr6 (5-145)||(2892694-2892834)
chr6 (15-152)||(19278139-19278275)
chr6 (1-157)||(9719118-9719273)
chr6 (18-161)||(12811085-12811227)
chr6 (1-158)||(1390319-1390476)
chr6 (8-158)||(14515473-14515621)
chr6 (6-96)||(34176397-34176487)
chr6 (1-98)||(5585389-5585486)
chr6 (3-123)||(1300654-1300775)
chr6 (3-152)||(21606933-21607082)
chr6 (1-161)||(9721225-9721384)
chr6 (1-100)||(13583777-13583876)
chr6 (10-158)||(16738092-16738239)
chr6 (1-107)||(10348885-10348992)
chr6 (1-140)||(33041488-33041619)
chr6 (43-142)||(6034201-6034300)
chr6 (1-91)||(25741474-25741564)
chr6 (36-112)||(2893676-2893752)
chr6 (10-152)||(30850008-30850150)
chr6 (1-101)||(1395692-1395793)
chr6 (1-158)||(10818229-10818373)
chr6 (87-152)||(26318478-26318543)
chr6 (1-139)||(29490482-29490621)
chr6 (20-160)||(15353362-15353501)
chr6 (86-152)||(9719037-9719103)
chr6 (10-159)||(665937-666092)
chr6 (33-160)||(15323223-15323350)
chr6 (35-158)||(23090995-23091118)
chr6 (91-158)||(30487306-30487373)
chr6 (33-111)||(16509328-16509405)
chr6 (87-157)||(16737997-16738067)
chr6 (19-136)||(2892948-2893068)
chr6 (97-146)||(23091142-23091191)
chr6 (7-51)||(2900017-2900061)
chr6 (86-158)||(9721138-9721210)
chr6 (89-161)||(14515646-14515718)
chr6 (91-146)||(10293425-10293480)
chr6 (86-157)||(10818388-10818459)
chr6 (91-142)||(34176587-34176638)
chr6 (91-152)||(19278040-19278101)
chr6 (86-158)||(1300792-1300864)
chr6 (1-88)||(25747403-25747491)
chr6 (19-102)||(14548711-14548794)
chr6 (19-66)||(32926737-32926784)
chr6 (33-107)||(26318356-26318430)
chr6 (89-142)||(665856-665909)
chr6 (91-152)||(1390496-1390557)
chr6 (86-119)||(25468438-25468471)
chr6 (86-158)||(3841258-3841330)
chr6 (36-80)||(25468521-25468565)
[»] scaffold0067 (2 HSPs)
scaffold0067 (1-158)||(39274-39434)
scaffold0067 (86-160)||(39184-39259)
[»] scaffold0096 (1 HSPs)
scaffold0096 (4-160)||(6582-6737)
[»] scaffold0262 (2 HSPs)
scaffold0262 (3-121)||(16385-16503)
scaffold0262 (89-158)||(16296-16365)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-112)||(15996-16107)
[»] scaffold0026 (3 HSPs)
scaffold0026 (1-152)||(1178-1329)
scaffold0026 (33-142)||(1516-1626)
scaffold0026 (94-152)||(1403-1461)
[»] scaffold0294 (1 HSPs)
scaffold0294 (1-107)||(15314-15420)
[»] scaffold0341 (1 HSPs)
scaffold0341 (1-107)||(18821-18926)
[»] scaffold0119 (2 HSPs)
scaffold0119 (33-142)||(37399-37508)
scaffold0119 (33-151)||(30722-30841)
[»] scaffold0012 (2 HSPs)
scaffold0012 (86-152)||(184779-184845)
scaffold0012 (70-123)||(184636-184689)
[»] scaffold0007 (1 HSPs)
scaffold0007 (86-152)||(242388-242454)
[»] scaffold0198 (1 HSPs)
scaffold0198 (91-152)||(3153-3214)
[»] scaffold0240 (1 HSPs)
scaffold0240 (91-158)||(17717-17782)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-67)||(81498-81564)
[»] scaffold0783 (1 HSPs)
scaffold0783 (2-67)||(5998-6063)
[»] scaffold0027 (1 HSPs)
scaffold0027 (91-152)||(121991-122051)


Alignment Details
Target: chr3 (Bit Score: 203; Significance: 1e-111; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 306
Target Start/End: Original strand, 220484 - 220798
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  220484 tttaaaaagttaacatattaacataataaacaatcttataacacttcaatcatacttgatttattttagaaaaacatgttacatagtccgtaatttaaaa 220583  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaagcagtgtaattgaaggaattaggaattgagaaattggtta 200  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||   || |||| ||||||||||||||| | |||||||||||    
T  220584 aagaaaagtaaattctcccctcccttctcctcctaaaccctccatccaaacagaccctaaatggtataatcgaaggaattaggaatggtgaaattggtta 220683  T
Q  201 tggatgaattttcaaag---------taaagttgacggtcgctttagtacacataaaaccaaacttttagtcaacannnnnnnnaatgataaatgttgtg 291  Q
    |||||||||||||||||         ||||||||| ||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||    
T  220684 tggatgaattttcaaagtacatattttaaagttgaaggtcgctttagtacacataaaaccaaacttttagtcaacattttttttaatgataaatgttgtg 220783  T
Q  292 attatagattctctg 306  Q
    |||||||||||||||    
T  220784 attatagattctctg 220798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 24560374 - 24560217
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||    
T  24560374 tttaaaaagttaacatattaacatgataaacgatcatataatacttcaatcacatttaatttattttagaaaaacatgttacatagtccgtaatttaaaa 24560275  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    |||||||  ||| |||||||||||||| |||||||||||||  ||| ||||| |||||    
T  24560274 aagaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 24560217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 30200175 - 30200320
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaa---tcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataattta 97  Q
    ||||||||||| |||||||||||||||||||||   ||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  30200175 tttaaaaagtttacatattaacataataaacaacgatcatatagtactttaatcacacttgatttattttagaaaaacatgttatatagtccgtaattta 30200274  T
Q  98 aaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctcc 143  Q
    ||||||||||||||| ||| |||||||||| ||||||| |||||||    
T  30200275 aaaaagaaaagtaaacccttccctcccttcccctcctataccctcc 30200320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 21773939 - 21773782
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    ||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||| ||||||| ||    
T  21773939 tttaaaaagttaacatatttacatgataaacaatcatataattcttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttagaa 21773840  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    |||||||||| | ||| || ||||||| ||||||||||| || ||| ||||| |||||    
T  21773839 aagaaaagtatacccttccttcccttcccctcctaaaccttcaatccaaacataccct 21773782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 3 - 158
Target Start/End: Original strand, 41110410 - 41110565
Alignment:
Q  3 taaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaa 102  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||  |||||| |||||||||||     
T  41110410 taaaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttcgaaaaacatgttatctagtccgtaatttaaaaac 41110509  T
Q  103 gaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    |||||||||| | ||| |||||||| ||||  |||||||| ||| ||||| |||||    
T  41110510 gaaaagtaaaccttcctctcccttcccctcacaaaccctcaatccaaacacaccct 41110565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 15 - 160
Target Start/End: Original strand, 28582610 - 28582755
Alignment:
Q  15 atattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatc 114  Q
    ||||||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||||||| || |||| |||||||||||||||||||||| |    
T  28582610 atattaacataataaacgataatataatacttcaaccacacttgatttatcttagaaaaacatgttatatcgtccgtaatttaaaaaagaaaagtaaacc 28582709  T
Q  115 ctcccctcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    ||||||||||||| ||||||||| ||||  || ||||| |||||||    
T  28582710 ctcccctcccttcccctcctaaatcctcagtccaaacacaccctaa 28582755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 37102236 - 37102358
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttag-aaaaacatgttacatagtccataatttaaa 99  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||| |||||||||    
T  37102236 tttaaaaagttaacatattaacataataa-cgatcatataatacttcaaccacacttgatttattttagaaaaaacatgttatatagtccgtaatttaaa 37102334  T
Q  100 aaagaaaagtaaatcctcccctcc 123  Q
    ||||| ||||||| | ||||||||    
T  37102335 aaagataagtaaaccttcccctcc 37102358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 6 - 152
Target Start/End: Complemental strand, 14898128 - 14897982
Alignment:
Q  6 aaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaa 105  Q
    |||||||| |||||||||  |||||| ||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||  |||||||||||||||    
T  14898128 aaagttaatatattaacacgataaacgatcatataatacttcaatcacacttaatttattttagaaaaacatgtcatatagtctgtaatttaaaaaagaa 14898029  T
Q  106 aagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    |||||||   ||| |||||||| |||||||||| ||| ||| |||||    
T  14898028 aagtaaaatttcctctcccttcccctcctaaactctcaatccaaaca 14897982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 8 - 158
Target Start/End: Original strand, 25655064 - 25655216
Alignment:
Q  8 agttaacatattaacataataaacaatcatat--aatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaa 105  Q
    |||||||||||||| || |||||  |||||||  |||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||| |||    
T  25655064 agttaacatattaatatgataaatgatcatatataatacttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaa 25655163  T
Q  106 aagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    |  |||| ||||||||||||||||||| | ||||||| ||| ||||| |||||    
T  25655164 agttaaaccctcccctcccttctcctcttcaaccctcaatccaaacacaccct 25655216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 152
Target Start/End: Complemental strand, 46205033 - 46204892
Alignment:
Q  11 taacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagta 110  Q
    ||||||||||| ||  ||||  ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  46205033 taacatattaatatgttaaatgatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatagttcataatttaaaaaagaaaagta 46204934  T
Q  111 aatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    ||  ||| | || |||||||| |||||||||| ||| |||||    
T  46204933 aacactctcatctcttctcctgctaaaccctcgatccaaaca 46204892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 2 - 142
Target Start/End: Original strand, 27542019 - 27542159
Alignment:
Q  2 ttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaa 101  Q
    |||||||  |||||||||||||| |||||| |||||||||||||||||||||| || |||||||||||||||| |||||| ||||| |||||||||||||    
T  27542019 ttaaaaatctaacatattaacatgataaacgatcatataatacttcaatcacagttaatttattttagaaaaatatgttatatagttcataatttaaaaa 27542118  T
Q  102 agaaaagtaaatcctcccctcccttctcctcctaaaccctc 142  Q
    ||||||  |||  ||||||||||| | |||| |||||||||    
T  27542119 agaaaaacaaactctcccctccctgcccctcgtaaaccctc 27542159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 8 - 142
Target Start/End: Original strand, 18654694 - 18654829
Alignment:
Q  8 agttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataattt-aaaaaagaaa 106  Q
    ||||||||||||||||| |||||  |||||||||||||||||| |||||| |||||||||||| |||||||||| ||||||| |||||| ||||||| ||    
T  18654694 agttaacatattaacatgataaatgatcatataatacttcaattacacttaatttattttagagaaacatgttatatagtccgtaatttaaaaaaagtaa 18654793  T
Q  107 agtaaatcctcccctcccttctcctcctaaaccctc 142  Q
    |  |||  ||||||||||||| ||||||||||||||    
T  18654794 aacaaactctcccctcccttcccctcctaaaccctc 18654829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 41040039 - 41040163
Alignment:
Q  3 taaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaa 102  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||  ||||||||| |||| |||||||  || ||| ||||||||||      
T  41040039 taaaaagttaacatattaacatgataaacaatcatataatacttcaatcacgcttactttattttaaaaaatcatgttatctaatccgtaatttaaaagc 41040138  T
Q  103 gaaaagtaaatcctcccctcccttc 127  Q
    |||||||||| |||| |||||||||    
T  41040139 gaaaagtaaaccctctcctcccttc 41040163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 2387847 - 2387970
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    ||||| ||||||| ||| |||||| |||||| ||||||||||| || |||||||||| ||||||||||||||||||||||| |||| || | ||||| ||    
T  2387847 tttaataagttaaaataataacatgataaacgatcatataataatttaatcacacttaatttattttagaaaaacatgttatatagaccgtgatttagaa 2387946  T
Q  101 aagaaaagtaaatcctcccctccc 124  Q
    |||||||||||| |||||||||||    
T  2387947 aagaaaagtaaaccctcccctccc 2387970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 3 - 152
Target Start/End: Original strand, 9312560 - 9312707
Alignment:
Q  3 taaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatg---ttacatagtccataatttaaa 99  Q
    |||||||||||||||||||||| ||||||||||||||||||||  |||||||||| ||||||||||||||| ||||   ||| ||||||  |||||||||    
T  9312560 taaaaagttaacatattaacatgataaacaatcatataatactcaaatcacacttaatttattttagaaaatcatgatgttatatagtcggtaatttaaa 9312659  T
Q  100 aaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    ||||||||  ||| |||||||||||     ||||||||||||| ||| |||||    
T  9312660 aaagaaaatcaaaccctcccctccc-----ctcctaaaccctcaatccaaaca 9312707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 16275794 - 16275872
Alignment:
Q  3 taaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgtta 81  Q
    |||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  16275794 taaaaagttaacttattaacatgataaacaaccatataatacttcaatcacacttgatttattttagaaaaacatgtta 16275872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 55327527 - 55327422
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||||||||| | |||||||||||||||| | |||||||| ||||||||||| ||||||||||| |||||| |||||||  |||||| ||||||||||    
T  55327527 tttaaaaagttagcgtattaacataataaacgaacatataatgcttcaatcacatttgatttatttaagaaaagcatgttatgtagtccgtaatttaaaa 55327428  T
Q  101 aagaaa 106  Q
    ||||||    
T  55327427 aagaaa 55327422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 107
Target Start/End: Complemental strand, 52474070 - 52473966
Alignment:
Q  3 taaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaa 102  Q
    ||||||||||||||||||| || ||||||| |||||||||||||||||||||  | |||||||||| || ||||||||| ||| ||| ||||||||||||    
T  52474070 taaaaagttaacatattaatatgataaacagtcatataatacttcaatcacatgtaatttattttaaaataacatgttatataatccgtaatttaaaaaa 52473971  T
Q  103 gaaaa 107  Q
    |||||    
T  52473970 gaaaa 52473966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 651852 - 651769
Alignment:
Q  37 tataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccc 120  Q
    ||||||| || |||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||    
T  651852 tataatattttaatcacacttaatttattttagaaaaacatgttatatagtctataatttaaaaaagaaaagtaaaccctcccc 651769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 36568993 - 36569067
Alignment:
Q  4 aaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatg 78  Q
    ||||||||||||||||||||| |||||||||| ||||||| ||||||||||||| ||||||||||||||||||||    
T  36568993 aaaaagttaacatattaacatgataaacaatcgtataatagttcaatcacacttaatttattttagaaaaacatg 36569067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 20 - 158
Target Start/End: Complemental strand, 41414216 - 41414078
Alignment:
Q  20 aacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctccc 119  Q
    ||||| |||||  |||||||||||||||||  || |||||||||||||| |||||||| |||| | || |||||||||||||| |||||| |  ||||||    
T  41414216 aacatgataaatgatcatataatacttcaaaaacgcttgatttattttaaaaaaacattttaccttgttcataatttaaaaaataaaagtgagccctccc 41414117  T
Q  120 ctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    |||||||  |||||||||||||| ||| ||||| |||||    
T  41414116 ctccctttccctcctaaaccctcaatctaaacataccct 41414078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 52185171 - 52185061
Alignment:
Q  3 taaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttaga-aaaacatgttacatagtccataatttaaaaa 101  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| | | || |||||||||||| ||||||||||| ||| |   |||||||||||    
T  52185171 taaaaagttaacatattaacatgataaacaatcatataatacttcaattatatttaatttattttagaaaaaacatgttatataatttgtaatttaaaaa 52185072  T
Q  102 agaaaagtaaa 112  Q
     ||||||||||    
T  52185071 cgaaaagtaaa 52185061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 43005826 - 43005942
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    ||||||||||||||||||||| || |||||  |||||||||||||||||||| | |  |||||||||||||||| |||||| |||||    |||||||||    
T  43005826 tttaaaaagttaacatattaatatgataaaatatcatataatacttcaatcaaattaaatttattttagaaaaatatgttatatagtttggaatttaaaa 43005925  T
Q  101 aagaaaagtaaatcctc 117  Q
    ||||||| |||||||||    
T  43005926 aagaaaattaaatcctc 43005942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 37807237 - 37807129
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttga-tttattttagaaaaacatgttacatagtccataatttaaa 99  Q
    ||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||| | ||||||||  ||||| |||||| ||||| | || ||||||    
T  37807237 tttaaaaagttaatatattaacatgataaacgatcatataatacttcaatcacacttaattttattttttaaaaa-atgttatatagttcgtagtttaaa 37807139  T
Q  100 aaagaaaagt 109  Q
    ||||||||||    
T  37807138 aaagaaaagt 37807129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 46556302 - 46556178
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatata--atacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaa 98  Q
    ||||||||||||| |||||||||| | ||||  |||||||  ||||||||||||||||  ||||||||| ||||||||| ||| ||||||  ||||||||    
T  46556302 tttaaaaagttaagatattaacatgacaaacggtcatatataatacttcaatcacactcaatttattttggaaaaacatattatatagtctgtaatttaa 46556203  T
Q  99 aaaagaaaagtaaatcctcccctcc 123  Q
    ||||||||| ||||  |||||||||    
T  46556202 aaaagaaaattaaactctcccctcc 46556178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 156
Target Start/End: Original strand, 10943720 - 10943856
Alignment:
Q  20 aacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctccc 119  Q
    ||||||||||| ||| ||||||||||||||  |||||| |||||||||| |||||||| || ||| || | |||||||||||  |||||| || ||||||    
T  10943720 aacataataaataattatataatacttcaaaaacacttaatttattttaaaaaaacattttgcattgttcgtaatttaaaaattaaaagtgaaccctccc 10943819  T
Q  120 ctcccttctcctcctaaaccctccatcgaaacagacc 156  Q
    ||| |||  |||| ||||||||| ||| |||||||||    
T  10943820 ctctctttccctcataaaccctcaatccaaacagacc 10943856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 33 - 152
Target Start/End: Original strand, 21090190 - 21090309
Alignment:
Q  33 atcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctc 132  Q
    |||||||||||||||||  |||||| |||||||||| ||||| || |||||| || |||||||||||||| |||||| | ||||| |||||||||  |||    
T  21090190 atcatataatacttcaaaaacacttaatttattttaaaaaaatattttacattgttcataatttaaaaaataaaagtgagtcctctcctcccttcctctc 21090289  T
Q  133 ctaaaccctccatcgaaaca 152  Q
    ||||||| || ||| |||||    
T  21090290 ctaaaccatcaatccaaaca 21090309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 86 - 160
Target Start/End: Original strand, 24253894 - 24253968
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    |||| |||||||||||||||||||||||||| |||||||||| ||| |||||||||||||| ||||| |||||||    
T  24253894 gtccgtaatttaaaaaagaaaagtaaatccttccctcccttccccttctaaaccctccatccaaacacaccctaa 24253968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 40463976 - 40464105
Alignment:
Q  19 taacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcc 118  Q
    |||||| |||||||||||||||| | ||||||| ||||| |||||||||||||||| ||||||  ||| || | ||||| ||||||||||||||  ||||    
T  40463976 taacatgataaacaatcatataaaaattcaatctcacttaatttattttagaaaaatatgttatgtagcccttgatttagaaaagaaaagtaaactctcc 40464075  T
Q  119 cctcccttctcctcctaaaccctccatcga 148  Q
    ||||  |||  ||| ||||||||| |||||    
T  40464076 cctctattcctctcataaaccctcaatcga 40464105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 152
Target Start/End: Complemental strand, 12790526 - 12790379
Alignment:
Q  4 aaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaag 103  Q
    ||||| |||| ||| |||||| || ||  |||||||| |||||| || |||||| ||||||| ||||||||||||||| |||| | | ||| ||||||||    
T  12790526 aaaaaattaaaataataacatgatgaaagatcatatattacttcgattacacttaatttattatagaaaaacatgttatatagcctacaatataaaaaag 12790427  T
Q  104 aaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    ||||||||| ||||| ||| ||||  ||||||||||||| ||| |||||    
T  12790426 aaaagtaaa-cctcctctctcttcctctcctaaaccctcaatccaaaca 12790379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 86 - 158
Target Start/End: Original strand, 34641162 - 34641234
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    |||| |||||||||||||||||||||  |||||||||||||| |||||||||||||||||| ||||| |||||    
T  34641162 gtccgtaatttaaaaaagaaaagtaagccctcccctcccttcccctcctaaaccctccatccaaacacaccct 34641234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 10748377 - 10748490
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaat-------catataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataa 93  Q
    |||||||||||||||||||||||| |||||  ||       ||||||||||||  ||||||||| ||||||||||||||||||||||| ||| ||| |||    
T  10748377 tttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttttatcacacttaatttattttagaaaaacatgttatatactccgtaa 10748476  T
Q  94 tttaaaaaagaaaa 107  Q
    ||||||||| ||||    
T  10748477 tttaaaaaaaaaaa 10748490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 13082953 - 13083010
Alignment:
Q  5 aaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgattt 62  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||    
T  13082953 aaaagttaacatattaacataataaacgatcatataatacttcaattacacttcattt 13083010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 152
Target Start/End: Original strand, 6803323 - 6803439
Alignment:
Q  36 atataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctccta 135  Q
    |||||||| ||||||||||| | |||||||||| |||||| | || |||||||  ||||||||||||||||| ||||  ||| |||| |||| |||||||    
T  6803323 atataatagttcaatcacacataatttattttataaaaacttattgcatagtctgtaatttaaaaaagaaaattaaactctctcctctcttcccctccta 6803422  T
Q  136 aaccctccatcgaaaca 152  Q
    |||| || ||| |||||    
T  6803423 aaccttcaatccaaaca 6803439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 86 - 145
Target Start/End: Original strand, 26135969 - 26136028
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccat 145  Q
    |||| |||||||||||||||||||||| ||||| |||||||| |||||||||||||||||    
T  26135969 gtccgtaatttaaaaaagaaaagtaaaccctccactcccttcccctcctaaaccctccat 26136028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 54574483 - 54574554
Alignment:
Q  36 atataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaa 107  Q
    |||||||||||||||||| ||| ||||||||||||||||| ||||| ||||||  ||||| |||||||||||    
T  54574483 atataatacttcaatcacgcttaatttattttagaaaaacgtgttatatagtctgtaattaaaaaaagaaaa 54574554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 152
Target Start/End: Original strand, 17474318 - 17474444
Alignment:
Q  26 ataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctccct 125  Q
    ||||| ||||| ||||||||||||  |||||| |||||||||  ||||| || ||||||  | | |||||||||||| |||||| ||  |||||||||||    
T  17474318 ataaataatcaaataatacttcaaaaacacttaatttatttttaaaaaatattttacattattcgtaatttaaaaaataaaagttaactctcccctccct 17474417  T
Q  126 tctcctcctaaaccctccatcgaaaca 152  Q
    || |||||| ||||||| ||| |||||    
T  17474418 tcccctcctcaaccctcaatccaaaca 17474444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 152
Target Start/End: Complemental strand, 26135929 - 26135808
Alignment:
Q  26 ataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctccct 125  Q
    ||||| ||| ||||||||||||||  |||||| |||||||||  |||||||| |||||| || |||||||||||||| |||||| | |     |||||||    
T  26135929 ataaataattatataatacttcaaaaacacttaatttatttttaaaaaacattttacattgttcataatttaaaaaataaaagtgagt-----cctccct 26135835  T
Q  126 tctcctcctaaaccctccatcgaaaca 152  Q
    |||| |||||||||||| ||| |||||    
T  26135834 tctcttcctaaaccctcaatccaaaca 26135808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 142
Target Start/End: Complemental strand, 44412499 - 44412377
Alignment:
Q  20 aacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctccc 119  Q
    ||||| |||||  |||||||||||||||||  |||||| |||||||||| |||||  | |||||| || | |||||||||||  |||| | | |||||||    
T  44412499 aacatgataaatcatcatataatacttcaaaaacacttaatttattttaaaaaaatgttttacattgttcgtaatttaaaaataaaaaatgagtcctccc 44412400  T
Q  120 ctcccttctcctcctaaaccctc 142  Q
    ||| |||| ||||||||||||||    
T  44412399 ctctcttcccctcctaaaccctc 44412377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 152
Target Start/End: Original strand, 55428551 - 55428617
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    |||| ||||||||| |||||||||||||| |||||||||||| |||||||||||||| ||| |||||    
T  55428551 gtccgtaatttaaagaagaaaagtaaatcatcccctcccttcccctcctaaaccctcaatccaaaca 55428617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 91 - 161
Target Start/End: Original strand, 24560394 - 24560464
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaag 161  Q
    ||||||||||| ||||||||||  ||||| ||| ||| |||||||||||||||||| ||||| ||||||||    
T  24560394 taatttaaaaatgaaaagtaaactctcccatccgttcccctcctaaaccctccatccaaacacaccctaag 24560464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 33 - 123
Target Start/End: Complemental strand, 25180019 - 25179929
Alignment:
Q  33 atcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcc 123  Q
    ||||||||||| ||||||||||||| | ||||||   || ||||| ||| |  |||||||||||||||| ||||||||| |||||||||||    
T  25180019 atcatataatatttcaatcacacttaaattatttccaaagaacattttatagtgtccataatttaaaaatgaaaagtaagtcctcccctcc 25179929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 33 - 123
Target Start/End: Complemental strand, 48683737 - 48683647
Alignment:
Q  33 atcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcc 123  Q
    ||||||||||| |||||  |||||| |||||||||| |||||||| |||||| || | |||||||| ||| |||||| | |||||||||||    
T  48683737 atcatataatatttcaaaaacacttaatttattttaaaaaaacattttacattgttcgtaatttaagaaataaaagtgagtcctcccctcc 48683647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 40858703 - 40858614
Alignment:
Q  20 aacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagt 109  Q
    ||||| |||||  |||||||||||||||||  |||||  |||||||||| |||||||| |||||| || | |||||||||||| ||||||    
T  40858703 aacatgataaatgatcatataatacttcaaaaacactaaatttattttaaaaaaacattttacattgttcgtaatttaaaaaataaaagt 40858614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 152
Target Start/End: Original strand, 16884077 - 16884209
Alignment:
Q  20 aacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctccc 119  Q
    ||||| |||||  |||||||||||||||||  |||||| |||||||||| ||| |||| |||||| || | ||| |||||||| |||||| | || |  |    
T  16884077 aacatgataaatgatcatataatacttcaaaaacacttaatttattttaaaaagacattttacattgttcgtaacttaaaaaataaaagtgagtcttatc 16884176  T
Q  120 ctcccttctcctcctaaaccctccatcgaaaca 152  Q
     |||||||  ||||||||||||| ||| |||||    
T  16884177 atcccttcctctcctaaaccctcaatccaaaca 16884209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 34641130 - 34641027
Alignment:
Q  20 aacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctccc 119  Q
    ||||| |||||  |||||||||||||||||  |||||| |||||||||| |||| | | |||||| || | |||||||||||| |||||| |  ||||||    
T  34641130 aacatgataaatgatcatataatacttcaaaaacacttaatttattttaaaaaatccttttacattgttcgtaatttaaaaaataaaagtgagccctccc 34641031  T
Q  120 ctcc 123  Q
    ||||    
T  34641030 ctcc 34641027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 152
Target Start/End: Complemental strand, 10943682 - 10943620
Alignment:
Q  90 ataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    |||||||||||||||||| |||||| || ||||| ||| |||| ||||||||||||| |||||    
T  10943682 ataatttaaaaaagaaaattaaatcttctcctcctttcccctcttaaaccctccatccaaaca 10943620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 152
Target Start/End: Complemental strand, 41110393 - 41110327
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    |||| ||||||||||| |||||||||| | || ||||||||| ||||||||| |||||||| |||||    
T  41110393 gtccgtaatttaaaaatgaaaagtaaaccttctcctcccttcccctcctaaatcctccatccaaaca 41110327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 118
Target Start/End: Original strand, 27197768 - 27197853
Alignment:
Q  33 atcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcc 118  Q
    |||||||||||||| ||  | |||| |||||||||| ||||| ||||||||| || | |||||||||||| |||||| | ||||||    
T  27197768 atcatataatactttaaatatacttaatttattttaaaaaaatatgttacattgttcgtaatttaaaaaataaaagtgagtcctcc 27197853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 152
Target Start/End: Complemental strand, 28581253 - 28581192
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    ||||||||||| ||||| |||| ||||||||||||||  || |||||||||||||| |||||    
T  28581253 taatttaaaaatgaaaactaaaccctcccctcccttcctcttctaaaccctccatccaaaca 28581192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 51819228 - 51819285
Alignment:
Q  17 attaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaa 74  Q
    |||||||| |||||| ||| ||||||||||||||||||||  |||||||||| |||||    
T  51819228 attaacatgataaacgatcgtataatacttcaatcacactaaatttattttaaaaaaa 51819285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 31684399 - 31684363
Alignment:
Q  45 ttcaatcacacttgatttattttagaaaaacatgtta 81  Q
    ||||||||||||| |||||||||||||||||||||||    
T  31684399 ttcaatcacacttaatttattttagaaaaacatgtta 31684363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 111
Target Start/End: Original strand, 54996786 - 54996874
Alignment:
Q  20 aacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaa 111  Q
    ||||| |||||  ||||||||||||||||||||||||| ||| |||||| | |||||| ||  ||| ||  |||||||||||||||||||||    
T  54996786 aacatgataaatgatcatataatacttcaatcacacttcattcatttta-ataaacatttt--ataatctgtaatttaaaaaagaaaagtaa 54996874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 158
Target Start/End: Complemental strand, 24253844 - 24253721
Alignment:
Q  36 atataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccc-tcccttctcctcct 134  Q
    |||||| |||||||  |||||| |||||||||| ||||  || |||||| |  |||||||||||||  |||||| ||  |||||| ||||||  ||||||    
T  24253844 atataacacttcaaaaacacttaatttattttaaaaaattattttacattgctcataatttaaaaattaaaagtgaacactccccctccctttccctcct 24253745  T
Q  135 aaaccctccatcgaaacagaccct 158  Q
    |||||||| ||| ||||| |||||    
T  24253744 aaaccctcaatccaaacacaccct 24253721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 123
Target Start/End: Complemental strand, 46978549 - 46978462
Alignment:
Q  36 atataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcc 123  Q
    ||||||||||||||  ||| || |||||||||| |||||||| |||||  || | |||||||||||  |||||| || ||||||||||    
T  46978549 atataatacttcaaaaacatttaatttattttaaaaaaacattttacaccgttcgtaatttaaaaattaaaagtgaaccctcccctcc 46978462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 160
Target Start/End: Complemental strand, 18654672 - 18654598
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    |||| ||||||||||| ||||  |||| |||||| || |||  |||||||||||||||||| ||||| |||||||    
T  18654672 gtccgtaatttaaaaatgaaatctaaaccctcccatctctttccctcctaaaccctccatccaaacacaccctaa 18654598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 137
Target Start/End: Complemental strand, 25655037 - 25654991
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaa 137  Q
    |||| |||||| |||||||||| |||||||||||||| |||||||||    
T  25655037 taatataaaaatgaaaagtaaaccctcccctcccttcccctcctaaa 25654991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 123
Target Start/End: Original strand, 42699731 - 42699821
Alignment:
Q  33 atcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcc 123  Q
    |||||||||||||||||  |||||| |||||||||  ||||| || ||| || || | |||||||||||  |||||| | |||||||||||    
T  42699731 atcatataatacttcaaaaacacttaatttattttttaaaaatattttatattgttcgtaatttaaaaacaaaaagtgagtcctcccctcc 42699821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 36568969 - 36568901
Alignment:
Q  92 aatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaag 161  Q
    |||||||||| ||||| ||||  ||||||||| |||  ||||||||||||||||| ||||| ||||||||    
T  36568969 aatttaaaaatgaaaa-taaactctcccctccattccactcctaaaccctccatccaaacacaccctaag 36568901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 152
Target Start/End: Complemental strand, 42772111 - 42772050
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    |||||||||||| |||||| | ||||||||||||||| |||| |||||| || ||| |||||    
T  42772111 taatttaaaaaataaaagtgagtcctcccctcccttcccctcttaaaccttcaatccaaaca 42772050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 158
Target Start/End: Original strand, 46205071 - 46205136
Alignment:
Q  93 atttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    |||||||||  ||||||||||| | |||||| ||| ||||||||||||| |||| ||||| |||||    
T  46205071 atttaaaaattaaaagtaaatctttccctccattcccctcctaaacccttcatccaaacaaaccct 46205136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 140
Target Start/End: Original strand, 52474092 - 52474141
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccc 140  Q
    |||||||||||  ||||||||| ||||| |||||||| ||||||||||||    
T  52474092 taatttaaaaataaaaagtaaaccctcctctcccttcccctcctaaaccc 52474141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 8432321 - 8432261
Alignment:
Q  98 aaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    ||||| |||||||| |||||||||| |||| |||| ||||||||||||  ||||| |||||    
T  8432321 aaaaaaaaaagtaagtcctcccctctcttcccctcgtaaaccctccattcaaacacaccct 8432261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 25499074 - 25499142
Alignment:
Q  93 atttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaag 161  Q
    |||||||||||||||||||| ||| ||||| || | |||| ||||| ||||||| |||||  |||||||    
T  25499074 atttaaaaaagaaaagtaaacccttccctctctccccctcttaaactctccatccaaacaccccctaag 25499142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 31894019 - 31894055
Alignment:
Q  45 ttcaatcacacttgatttattttagaaaaacatgtta 81  Q
    |||||||||| || |||||||||||||||||||||||    
T  31894019 ttcaatcacatttaatttattttagaaaaacatgtta 31894055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 117; Significance: 1e-59; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 4 - 160
Target Start/End: Original strand, 31543162 - 31543318
Alignment:
Q  4 aaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaag 103  Q
    ||||||||||||||||||||| ||||||  |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||    
T  31543162 aaaaagttaacatattaacatcataaacggtcatataatacttcaatcacacttaatttattttagaaaaacatgttatatggtccataatttaaaaaag 31543261  T
Q  104 aaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    ||||||||| |||||||||||||| |||||||||||||| ||||||||| |||||||    
T  31543262 aaaagtaaaccctcccctcccttcccctcctaaaccctcaatcgaaacacaccctaa 31543318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 7503043 - 7503200
Alignment:
Q  3 taaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaa 102  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||| |||||||||||||||     
T  7503043 taaaaagttaacatattaacatgataaacaatcatataatactttaatcacacttaatttattttagaaaaacatgttatataatccataatttaaaaac 7503142  T
Q  103 gaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    |||||||||| ||||||||||| || ||||| ||| |||| ||| ||||| |||||||    
T  7503143 gaaaagtaaaccctcccctcccctcccctcccaaagcctcaatccaaacacaccctaa 7503200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 1281300 - 1281149
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||||||| || |||| ||||||||||    
T  1281300 tttaaaaagttaacatattaacataataaacgataatataatacttcaaccacacttgatttatcttagaaaaacatgttatatcgtccgtaatttaaaa 1281201  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    |||||||||||| |||| | ||||||| |||||||||||||| ||| |||||    
T  1281200 aagaaaagtaaaccctctcatcccttcccctcctaaaccctcaatccaaaca 1281149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 9718566 - 9718723
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||||| || ||  |||||||||||| |||||| ||||| ||||||||||||    
T  9718566 tttaaaaagttagcatattaacatgataaacaatcatataatacttcaatcacaattaatgaattttagaaaaatatgttatatagttcataatttaaaa 9718665  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    ||||||||||||   ||||||||||||||||||||||||||| ||| ||||| |||||    
T  9718666 aagaaaagtaaactttcccctcccttctcctcctaaaccctcaatccaaacacaccct 9718723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 11575493 - 11575633
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| |||||||||| ||||||||||||||||||||||| ||| |   ||||||||||    
T  11575493 tttaaaaagttaacatattaacatgataaacgatcatataatactttaatcacacttaatttattttagaaaaacatgttatataatttgtaatttaaaa 11575592  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaaccct 141  Q
    | |||||||||| |||||||||||||||| |||||||||||    
T  11575593 atgaaaagtaaaccctcccctcccttctcatcctaaaccct 11575633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 4 - 120
Target Start/End: Complemental strand, 16653103 - 16652987
Alignment:
Q  4 aaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaag 103  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||    
T  16653103 aaaaagttaacatattaacaaaataaacgatcatataatacttcaatcacacttgatttattttataaaaacatgttatatagtccgtaatttaaaaaag 16653004  T
Q  104 aaaagtaaatcctcccc 120  Q
    ||||||||| |||||||    
T  16653003 aaaagtaaaccctcccc 16652987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 5 - 158
Target Start/End: Original strand, 1026940 - 1027092
Alignment:
Q  5 aaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaaga 104  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||| |||| ||||||||||||||||||| ||| ||||||| ||||||||||||||    
T  1026940 aaaagttaacatattaacatgataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat-ttatatagtccgtaatttaaaaaaga 1027038  T
Q  105 aaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    ||||| || ||| |||||||||| | |||||||||||  ||| ||||| |||||    
T  1027039 aaagtgaacccttccctcccttcccttcctaaacccttaatccaaacacaccct 1027092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 10 - 152
Target Start/End: Complemental strand, 7979288 - 7979146
Alignment:
Q  10 ttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagt 109  Q
    ||||| ||||||||| ||||| |||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  7979288 ttaacttattaacatgataaataatcatataatacttcaattgcacttgatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaagt 7979189  T
Q  110 aaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    |||  |||| ||||||||  || |||||||||| ||| |||||    
T  7979188 aaactctcctctcccttcctcttctaaaccctcaatccaaaca 7979146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 11785683 - 11785561
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||||||||| ||||||||||| |||||||| ||||||||||||||||| || || || |||||||||||||||||||| ||||| ||||||||||||    
T  11785683 tttaaaaagttagcatattaacatgataaacaaacatataatacttcaatcgcaattaatgtattttagaaaaacatgttatatagttcataatttaaaa 11785584  T
Q  101 aagaaaagtaaatcctcccctcc 123  Q
    ||||||||||||  |||||||||    
T  11785583 aagaaaagtaaactctcccctcc 11785561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 11033574 - 11033417
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||||| ||||||||||||||| |||||| ||||||||||  ||||||||||| | |||||||||||||||||||| || ||||||| | ||||||||    
T  11033574 tttaaaaaattaacatattaacatgataaacgatcatataattattcaatcacacataatttattttagaaaaacatgatatatagtccgttatttaaaa 11033475  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    ||||||||||||  | |||||||||||  || |||||||||| ||| ||||| |||||||    
T  11033474 aagaaaagtaaa--cccccctcccttcctcttctaaaccctcaatccaaacacaccctaa 11033417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 28083899 - 28083758
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||| ||||||||| | ||||| |||||||||||||||||||| ||||||||||| |||||||||||| |||||||||| || |||  ||||||||||    
T  28083899 tttaaagagttaacatgtcaacatgataaacaatcatataatactccaatcacacttaatttattttagagaaacatgttatattgtctgtaatttaaaa 28083800  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaaccctc 142  Q
    |||||||  |||  ||| ||||||||| ||||||||||||||    
T  28083799 aagaaaaacaaaatctctcctcccttcccctcctaaaccctc 28083758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 33922677 - 33922522
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||||||||||||||||| ||| |||||||||||||| |||||||||||| |||  |||||||||| ||||| |||||| |||||||  |||||||||    
T  33922677 tttaaaaagttaacatattatcatgataaacaatcatatcatacttcaatcatactaaatttattttaaaaaaatatgttatatagtccggaatttaaaa 33922578  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaag 161  Q
    ||||||||||||     | |||||||| | |||||||||||| ||| ||||| ||||||||    
T  33922577 aagaaaagtaaa-----ctctcccttcccttcctaaaccctcaatccaaacataccctaag 33922522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 5 - 160
Target Start/End: Complemental strand, 2248605 - 2248450
Alignment:
Q  5 aaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaaga 104  Q
    |||||||||| |||||||||  |||||  |||||||||| | ||||||||||||||||||||||||||||||||||| |||  || |||||||||||||     
T  2248605 aaaagttaacttattaacatcgtaaacggtcatataatattccaatcacacttgatttattttagaaaaacatgttatataaaccgtaatttaaaaaagg 2248506  T
Q  105 aaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    ||| | ||  ||||||||||||| |||||||||| ||| ||| ||||| |||||||    
T  2248505 aaattgaactctcccctcccttcccctcctaaactctcaatccaaacacaccctaa 2248450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 37032536 - 37032425
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    ||||||||||||||||||||| || |||||| |||||||||||||| |||||||||| |||||||||| |||||||||||| ||||||  ||||||||||    
T  37032536 tttaaaaagttaacatattaagatgataaactatcatataatactttaatcacacttaatttattttaaaaaaacatgttatatagtctgtaatttaaaa 37032437  T
Q  101 aagaaaagtaaa 112  Q
    ||||||| ||||    
T  37032436 aagaaaaataaa 37032425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 40990271 - 40990427
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||| ||||||||||||||||| |||| | |||||||||||||||||||| |||| |||||||||| | |||||||||| ||||||| ||||||||||    
T  40990271 tttaaagagttaacatattaacatgataagcgatcatataatacttcaatcagacttaatttattttaaagaaacatgttatatagtccgtaatttaaaa 40990370  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    |||||||  |||  ||| |||||||||  ||||| ||||||| ||| ||||| |||||    
T  40990371 aagaaaaacaaactctctcctcccttcctctcct-aaccctcaatccaaacacaccct 40990427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 42650422 - 42650534
Alignment:
Q  3 taaaaagttaacatat--ta-acataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaa 99  Q
    ||||||||||||||||  || |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||| |||||||||    
T  42650422 taaaaagttaacatatgttatacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatattccgtaatttaaa 42650521  T
Q  100 aaagaaaagtaaa 112  Q
    || ||||||||||    
T  42650522 aacgaaaagtaaa 42650534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 30479804 - 30479955
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||||||||||||||||||  | |||||  || |||||||||||||||||||||||||||||||||||||||||||  | ||||||  || |||||||    
T  30479804 tttaaaaagttaacatattaaggtgataaatgataatataatacttcaatcacacttgatttattttagaaaaacatgacatatagtctgtagtttaaaa 30479903  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    ||||||| |||| ||||| |||| |||  ||| ||||||||| ||| |||||    
T  30479904 aagaaaactaaaccctccgctccattcctctcataaaccctcaatccaaaca 30479955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 158
Target Start/End: Complemental strand, 6315216 - 6315066
Alignment:
Q  4 aaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaag 103  Q
    ||||| ||||||||||||| | |||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||| ||||||     
T  6315216 aaaaaattaacatattaacttgataaacgatcgtataatacttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaattaaaaaaa- 6315118  T
Q  104 aaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
      | |||||| |  |||||| ||| |||||||||||||| ||| ||||| |||||    
T  6315117 --atgtaaattcctccctcc-ttcgcctcctaaaccctcaatccaaacacaccct 6315066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 142
Target Start/End: Complemental strand, 13405124 - 13404992
Alignment:
Q  10 ttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagt 109  Q
    ||||| ||||||||| |||||| ||||||||||| |||||| | |  | ||||||||||||||||||||||| ||||||  | |||||||||||||||||    
T  13405124 ttaacgtattaacatgataaacgatcatataataattcaattatatataatttattttagaaaaacatgttatatagtctgttatttaaaaaagaaaagt 13405025  T
Q  110 aaatcctcccctcccttctcctcctaaaccctc 142  Q
    || | ||||| ||||||| ||||||||||||||    
T  13405024 aatttctcccatcccttcccctcctaaaccctc 13404992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 158
Target Start/End: Original strand, 12022249 - 12022387
Alignment:
Q  20 aacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctccc 119  Q
    ||||| |||||  |||||||||||||||||  |||||| |||||||||| |||||||| |||||| |||| |||||||||||| |||||| |  ||||||    
T  12022249 aacatgataaatgatcatataatacttcaaaaacacttaatttattttaaaaaaacattttacattgtccgtaatttaaaaaataaaagtgagccctccc 12022348  T
Q  120 ctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    |||| ||| |||||||||||||| ||| ||||| |||||    
T  12022349 ctcctttcccctcctaaaccctcaatccaaacacaccct 12022387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 41103611 - 41103709
Alignment:
Q  19 taacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctc 117  Q
    |||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    |||||||||||||||||||||| ||||    
T  41103611 taacatgataaacgatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatagcttgtaatttaaaaaagaaaagtaaaccctc 41103709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 30664518 - 30664405
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    ||||||||||||||||||||| || ||||||  | |||||||||||||||||||||| ||||||||| ||||||||||||| | ||||   |||||||||    
T  30664518 tttaaaaagttaacatattaatatgataaacggttatataatacttcaatcacacttaatttatttttgaaaaacatgttataaagtctgcaatttaaaa 30664419  T
Q  101 aagaaaagtaaatc 114  Q
    ||||||| ||||||    
T  30664418 aagaaaaataaatc 30664405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 8 - 141
Target Start/End: Complemental strand, 31738573 - 31738440
Alignment:
Q  8 agttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaa 107  Q
    ||||||||||||||||| |||||  |||||||||||||||||| |||||| ||||||| |||| |||||||||| ||||||  |||||||||||| ||||    
T  31738573 agttaacatattaacatgataaatgatcatataatacttcaattacacttaatttattctagagaaacatgttatatagtctgtaatttaaaaaaaaaaa 31738474  T
Q  108 gtaaatcctcccctcccttctcctcctaaaccct 141  Q
      |||  ||||| || |||| |||||||||||||    
T  31738473 aaaaactctcccttctcttcccctcctaaaccct 31738440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 36308996 - 36308876
Alignment:
Q  5 aaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttatttta-gaaaaacatgttacatagtccataatttaaaaaag 103  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||  |||||||||||| ||||||  || ||||| ||||    
T  36308996 aaaagtaaacatattaacatgataaacaatcatataatacttcaatcacacttagtttattttataaaaaacatgttatatagtctctagtttaacaaag 36308897  T
Q  104 aaaagtaaatcctcccctccc 124  Q
    |||| | || |||||||||||    
T  36308896 aaaaatgaaccctcccctccc 36308876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 152
Target Start/End: Complemental strand, 10028241 - 10028116
Alignment:
Q  27 taaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctccctt 126  Q
    ||||| ||||||||| ||||||| ||||||| |||||||||| ||||| |||||| || |||| ||||||||||||||||||||||  ||| |||||  |    
T  10028241 taaacgatcatataagacttcaaccacacttaatttattttaaaaaaatatgttatatggtccgtaatttaaaaaagaaaagtaaaatctcacctcctat 10028142  T
Q  127 ctcctcctaaaccctccatcgaaaca 152  Q
    | |||||||||||||| ||| |||||    
T  10028141 cccctcctaaaccctcgatccaaaca 10028116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 18 - 142
Target Start/End: Original strand, 3726959 - 3727083
Alignment:
Q  18 ttaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctc 117  Q
    ||||||| ||||||  |||||||||| ||||||||  ||| ||||||||||||||||||||||| ||||||  |||| |||||||||||||||||  |||    
T  3726959 ttaacatgataaacggtcatataatatttcaatcatgcttaatttattttagaaaaacatgttatatagtctgtaatctaaaaaagaaaagtaaactctc 3727058  T
Q  118 ccctcccttctcctcctaaaccctc 142  Q
     ||||||||  ||||||||| ||||    
T  3727059 acctccctttccctcctaaatcctc 3727083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 4247604 - 4247764
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataattt-aaa 99  Q
    ||||| |||||||||||||| ||| |||||| |||||||||||||| ||||| |||| |||||||||| |||||||| |   ||| | |||||||| |||    
T  4247604 tttaagaagttaacatattagcatgataaacgatcatataatacttaaatcatacttaatttattttaaaaaaacatat--aataattcataatttaaaa 4247701  T
Q  100 aaagaaaagtaaatcctcc----cctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    ||||||||||||| |||||    ||||||||| ||||||||||| || ||| ||||| |||||    
T  4247702 aaagaaaagtaaaccctcctctacctcccttcccctcctaaaccttcaatccaaacacaccct 4247764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 107
Target Start/End: Original strand, 29358430 - 29358532
Alignment:
Q  5 aaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaaga 104  Q
    |||| ||||||||||||||| |||||| ||| ||||||||||||||||||||| ||||||| |||||||| |||||| ||| ||| || |||||||| ||    
T  29358430 aaaaattaacatattaacattataaacgatcctataatacttcaatcacacttaatttattctagaaaaatatgttatataatccgtagtttaaaaatga 29358529  T
Q  105 aaa 107  Q
    |||    
T  29358530 aaa 29358532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 86 - 160
Target Start/End: Original strand, 43732859 - 43732933
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    |||| |||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||| |||||||    
T  43732859 gtccgtaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctccatccaaacacaccctaa 43732933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 37923165 - 37923306
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||| |||||| |||||||||| |||||  ||||||||||| || |||| ||||| ||||||||||||||||||||||| ||||||  ||||||||||    
T  37923165 tttaaagagttaaaatattaacatgataaatgatcatataatattttaatcgcacttaatttattttagaaaaacatgttatatagtctgtaatttaaaa 37923264  T
Q  101 aagaaaagtaaatcctcccctcccttctc-ctcctaaaccct 141  Q
    |  || | |||| ||| || ||||||| | ||||||||||||    
T  37923265 ataaatattaaacccttccatcccttccctctcctaaaccct 37923306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 29691012 - 29691118
Alignment:
Q  4 aaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattt---tagaaaaacatgttacatagtccataatttaaaa 100  Q
    ||||||||||||||||||||| |||||| ||||||| ||||||||||||||||| | | ||||    | |||||||||||| ||||||| |||||||| |    
T  29691012 aaaaagttaacatattaacatgataaacgatcatatgatacttcaatcacacttaagtcatttaaaaaaaaaaacatgttaaatagtccgtaatttaata 29691111  T
Q  101 aagaaaa 107  Q
    |||||||    
T  29691112 aagaaaa 29691118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 35694842 - 35694915
Alignment:
Q  1 tttaaaaagttaacatattaac-ataataaacaatcatataatacttcaatcacacttgatttattttagaaaaa 74  Q
    |||||||||||||||||||||  ||||||| | |||||||||||||||||||||||||||||||||||| |||||    
T  35694842 tttaaaaagttaacatattaaatataataa-cgatcatataatacttcaatcacacttgatttattttaaaaaaa 35694915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 86 - 161
Target Start/End: Complemental strand, 8815213 - 8815138
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaag 161  Q
    |||| ||||||||||||||||||||| || || |||| |||| |||||||||||||||||| ||||| ||||||||    
T  8815213 gtccgtaatttaaaaaagaaaagtaagtcatcacctctcttcccctcctaaaccctccatccaaacacaccctaag 8815138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 91 - 158
Target Start/End: Complemental strand, 31543139 - 31543072
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    ||||||||||| |||||||||| |||||||||||||| |||| ||||||||||||| ||||| |||||    
T  31543139 taatttaaaaatgaaaagtaaaccctcccctcccttcccctcttaaaccctccatccaaacataccct 31543072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 89 - 146
Target Start/End: Original strand, 11033593 - 11033650
Alignment:
Q  89 cataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatc 146  Q
    ||||||||||||  |||||||||||| || ||||||||||||||||||||||||||||    
T  11033593 cataatttaaaattgaaaagtaaatcttctcctcccttctcctcctaaaccctccatc 11033650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 91 - 152
Target Start/End: Original strand, 36309020 - 36309081
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    ||||||||| | |||||||||| |||||||||||||| |||||||||||||||||| |||||    
T  36309020 taatttaaagatgaaaagtaaaccctcccctcccttcccctcctaaaccctccatccaaaca 36309081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 34633859 - 34633819
Alignment:
Q  36 atataatacttcaatcacacttgatttattttagaaaaaca 76  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  34633859 atataatacttcaatcacacttgatttattttagaaaaaca 34633819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 152
Target Start/End: Original strand, 20472811 - 20472930
Alignment:
Q  33 atcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctc 132  Q
    |||||||||||||||||  ||||||||||||||||  |||||||  |||||| || | |||||||||||| |||||| | |||| || ||||||  |||     
T  20472811 atcatataatacttcaaaaacacttgatttatttttaaaaaacaacttacattgttcgtaatttaaaaaataaaagtgagtccttccttccctttccctt 20472910  T
Q  133 ctaaaccctccatcgaaaca 152  Q
    ||||||| || ||| |||||    
T  20472911 ctaaaccttcaatccaaaca 20472930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 160
Target Start/End: Complemental strand, 30365252 - 30365128
Alignment:
Q  36 atataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctccta 135  Q
    |||||| |||||||  |||||| ||||||| || ||||| || |||  | || | |||||||||||  |||||| ||  ||||||||| |||||||||||    
T  30365252 atataacacttcaaaaacacttaatttattctaaaaaaatattttatgttgttcgtaatttaaaaattaaaagtgaactctcccctcctttctcctccta 30365153  T
Q  136 aaccctccatcgaaacagaccctaa 160  Q
    ||||||| ||| ||||| |||||||    
T  30365152 aaccctcaatccaaacacaccctaa 30365128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 70 - 158
Target Start/End: Complemental strand, 43732767 - 43732679
Alignment:
Q  70 aaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    |||||||| |||||| ||   |||||||||||| |||||| | |||||| |||||||| |||||||||||||| ||| ||||| |||||    
T  43732767 aaaaacattttacattgttagtaatttaaaaaataaaagtgagtcctcctctcccttcccctcctaaaccctcaatccaaacacaccct 43732679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 160
Target Start/End: Original strand, 8671913 - 8672040
Alignment:
Q  33 atcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctc 132  Q
    |||||||||||||||||  | |||| |||||||||| ||| |||| ||||||  |   |||||||||||| |||| ||| || |||||| ||||| |||     
T  8671913 atcatataatacttcaaaaatacttaatttattttaaaaatacattttacattatttgtaatttaaaaaataaaattaagtcatcccctaccttcccctt 8672012  T
Q  133 ctaaaccctccatcgaaacagaccctaa 160  Q
    ||||| |||| ||| ||||| |||||||    
T  8672013 ctaaatcctcaatccaaacacaccctaa 8672040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 158
Target Start/End: Original strand, 8815263 - 8815385
Alignment:
Q  36 atataatacttcaatcacacttga-tttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcct 134  Q
    ||||||||||||||  |||||| | ||||||| | |||||||| |||||  || | |||||||||||  |||||| || |||||||||||| | ||||||    
T  8815263 atataatacttcaaaaacactttaatttatttga-aaaaacattttacagtgttcgtaatttaaaaattaaaagtgaaccctcccctccctccccctcct 8815361  T
Q  135 aaaccctccatcgaaacagaccct 158  Q
    |||||||| ||| ||||| |||||    
T  8815362 aaaccctcaatccaaacacaccct 8815385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 158
Target Start/End: Complemental strand, 9933379 - 9933240
Alignment:
Q  20 aacataataaacaatcatataatacttcaatcacacttgatttatttt-agaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcc 118  Q
    ||||| |||||  ||||||||||| |||||  | |||| ||||||||| | ||||| || |||||| || | |||||||||| | |||||| ||| || |    
T  9933379 aacatgataaatgatcatataatatttcaaaaatacttaatttattttgaaaaaaatattttacattgttcgtaatttaaaatataaaagtgaattcttc 9933280  T
Q  119 cctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    ||||| ||||||||||||||| || ||| ||||| |||||    
T  9933279 cctcctttctcctcctaaaccttcaatccaaacacaccct 9933240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 161
Target Start/End: Complemental strand, 12022210 - 12022139
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcct-aaaccctccatcgaaacagaccctaag 161  Q
    |||||||||||||||||||||  |||||||||||||| ||| || ||||||||||||  |||| ||||||||    
T  12022210 taatttaaaaaagaaaagtaagccctcccctcccttccccttctcaaaccctccatcctaacacaccctaag 12022139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 30581916 - 30582033
Alignment:
Q  20 aacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagt------ccataatttaaaaaagaaaagtaaat 113  Q
    ||||| |||||  ||||||||||||||||||||||||| |||| |||||   |||||  ||| |||||      || |||||||||||||||||||||      
T  30581916 aacatgataaatgatcatataatacttcaatcacacttaatttgtttta---aaacacattatatagtgtccgtccgtaatttaaaaaagaaaagtaagc 30582012  T
Q  114 cctcccctcccttctcctcct 134  Q
    |||||||||||||| ||||||    
T  30582013 cctcccctcccttcccctcct 30582033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 160
Target Start/End: Complemental strand, 3726935 - 3726861
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    |||| ||||||||||| ||||| |||| | |||  ||||||| |||||||||||||||||| ||||| |||||||    
T  3726935 gtccgtaatttaaaaatgaaaaataaaccgtcctttcccttcccctcctaaaccctccatccaaacacaccctaa 3726861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 152
Target Start/End: Original strand, 16024337 - 16024391
Alignment:
Q  98 aaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    |||||||||||||||  ||||||||||||| ||||||||| |||||||| |||||    
T  16024337 aaaaagaaaagtaaactctcccctcccttcccctcctaaatcctccatccaaaca 16024391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 160
Target Start/End: Original strand, 31738595 - 31738669
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    |||| ||||||||||| ||||  |||| ||||||||  |||| |||||||||||||||||| ||||| |||||||    
T  31738595 gtccgtaatttaaaaatgaaatttaaaccctcccctttcttcccctcctaaaccctccatccaaacacaccctaa 31738669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 119
Target Start/End: Original strand, 38198168 - 38198253
Alignment:
Q  33 atcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctccc 119  Q
    ||||||||||||||||||||||||| ||| |||||| |||||||  ||| |  |||  ||||||||||| ||||||||| |||||||    
T  38198168 atcatataatacttcaatcacacttaattcatttta-aaaaacactttatagtgtctgtaatttaaaaatgaaaagtaagtcctccc 38198253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 152
Target Start/End: Original strand, 7394638 - 7394699
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    |||||||||||| |||||| || | |||||||||||| |||||||||||||| ||| |||||    
T  7394638 taatttaaaaaataaaagtgaaccatcccctcccttcccctcctaaaccctcaatccaaaca 7394699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 152
Target Start/End: Original strand, 24243152 - 24243284
Alignment:
Q  19 taacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcc 118  Q
    |||||| |||||  ||||||||||||||||||||||||| ||| |||| | ||||| || | | || |||  ||||||| ||||| |||||||  |||||    
T  24243152 taacatgataaatgatcatataatacttcaatcacacttaattaatttgaaaaaaagatctcatattgtctgtaatttagaaaaggaaagtaagccctcc 24243251  T
Q  119 cctcccttctcctcctaaaccctccatcgaaaca 152  Q
    ||||| ||| || | ||||||||| ||| |||||    
T  24243252 cctccattc-ccccttaaaccctcgatccaaaca 24243284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 158
Target Start/End: Complemental strand, 41103568 - 41103504
Alignment:
Q  94 tttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    |||||||| |||||  ||| ||||||||| |||| |||||||||||||||||| ||||| |||||    
T  41103568 tttaaaaacgaaaatcaaaccctcccctctcttcccctcctaaaccctccatccaaacacaccct 41103504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 161
Target Start/End: Original strand, 2481977 - 2482020
Alignment:
Q  118 ccctcccttctcctcctaaaccctccatcgaaacagaccctaag 161  Q
    |||||||||| |||||||||||||||||| ||||| ||||||||    
T  2481977 ccctcccttcccctcctaaaccctccatccaaacataccctaag 2482020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 161
Target Start/End: Original strand, 11785698 - 11785773
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaag 161  Q
    |||| ||||||||||| |||||  ||| |||||| || |||  |||||||||||||||||| ||||| ||||||||    
T  11785698 gtccgtaatttaaaaatgaaaatcaaaccctcccttctcttaccctcctaaaccctccatccaaacacaccctaag 11785773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 91 - 158
Target Start/End: Original strand, 30365307 - 30365374
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    |||||||||||||||||| ||  |||||||||||||  ||| ||||| |||||||| ||||| |||||    
T  30365307 taatttaaaaaagaaaaggaagccctcccctcccttacccttctaaatcctccatccaaacacaccct 30365374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 161
Target Start/End: Original strand, 34196492 - 34196554
Alignment:
Q  98 aaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaag 161  Q
    ||||||||||||||  ||||||| |||||| |||||||||||||||||| ||||  ||||||||    
T  34196492 aaaaagaaaagtaagccctcccc-cccttcccctcctaaaccctccatccaaacgcaccctaag 34196554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 16024292 - 16024150
Alignment:
Q  20 aacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaa-catgttacatagtccataatttaaaaaagaaaagtaaatcctcc 118  Q
    ||||| |||||  |||||||||||||||||  |||||| |||||||| | ||||| ||| ||| || || | |||||||||||  |||| | |   ||||    
T  16024292 aacatgataaatgatcatataatacttcaaaaacacttaatttatttaaaaaaaatcattttatattgttcgtaatttaaaaacaaaaactgagctctcc 16024193  T
Q  119 cctcccttctcctcctaaaccctccatcgaaacagaccctaag 161  Q
    ||||||||| | |||||||||||| ||| ||||| ||| ||||    
T  16024192 cctcccttcccttcctaaaccctcaatccaaacacaccataag 16024150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 1281315 - 1281356
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttc 127  Q
    |||| ||||||||||| ||||| |||||||||||||||||||    
T  1281315 gtccgtaatttaaaaatgaaaactaaatcctcccctcccttc 1281356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 27487128 - 27487071
Alignment:
Q  20 aacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacat 77  Q
    ||||| |||||  |||||||||||||||||| |||||| |||  ||||||||||||||    
T  27487128 aacatgataaatgatcatataatacttcaataacacttaattggttttagaaaaacat 27487071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 27483685 - 27483641
Alignment:
Q  33 atcatataatacttcaatcacacttgatttattttagaaaaacat 77  Q
    |||||||||||||||||| |||||| |||||||| | ||||||||    
T  27483685 atcatataatacttcaataacactttatttatttaaaaaaaacat 27483641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 34634300 - 34634260
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataa 41  Q
    ||||||||||||||||||||||||  |||||||| ||||||    
T  34634300 tttaaaaagttaacatattaacattgtaaacaataatataa 34634260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 113
Target Start/End: Original strand, 36166209 - 36166288
Alignment:
Q  33 atcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaat 113  Q
    ||||||||||| ||||||||||||||||| |||||  ||||| || ||| |  |||| ||||||| |||| ||||||||||    
T  36166209 atcatataatagttcaatcacacttgattgatttt-taaaaatattttataatgtccgtaatttataaaataaaagtaaat 36166288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 160
Target Start/End: Complemental strand, 40633050 - 40632994
Alignment:
Q  104 aaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    ||||||||  ||||| |||||||| |||||||||||||||||  ||||| |||||||    
T  40633050 aaaagtaagccctcctctcccttcccctcctaaaccctccattcaaacacaccctaa 40632994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 113; Significance: 3e-57; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 30010489 - 30010329
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||| ||||||||||||||||| |||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||| |||||||||     
T  30010489 tttaaatagttaacatattaacattataaacgatcatataatacttcaaccacacttaatttattttagaaaaacatgttatatagtccgtaatttaaac 30010390  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaag 161  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||| ||||| ||||||||    
T  30010389 aagaaaagtaaatcctcccctcccttcccctcctaaaccctcaatccaaacacaccctaag 30010329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 2859019 - 2859157
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    ||||||||||||||||| | |||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||| ||||||||||    
T  2859019 tttaaaaagttaacatacttacattataaacaatcatataatacttcaatcacacttaatttatttttgaaaaacatgttatatagtccgtaatttaaaa 2859118  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaacc 139  Q
    || ||||||||| |||||||||||||| |||||||||||    
T  2859119 aataaaagtaaaccctcccctcccttcccctcctaaacc 2859157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 32951407 - 32951564
Alignment:
Q  3 taaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaa 102  Q
    |||||||||||||||||||||| |||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||  ||||||| |||||||||||     
T  32951407 taaaaagttaacatattaacatgataaacgatcgtataatacttcaatcacacttaatttattttagaaaaacatgttctatagtccgtaatttaaaaac 32951506  T
Q  103 gaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    ||||||||||  |||||||||||||  ||||||||| ||| ||| ||||| |||||||    
T  32951507 gaaaagtaaactctcccctcccttcctctcctaaactctcaatccaaacacaccctaa 32951564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 35349551 - 35349708
Alignment:
Q  3 taaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaa 102  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| || |||  ||||||||||||||| |||||| ||||||| |||||||||||     
T  35349551 taaaaagttaacatattaacatgataaacaatcatataatacttcaataacccttagtttattttagaaaaaaatgttatatagtccgtaatttaaaaac 35349650  T
Q  103 gaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    |||||||||| |||||||||||||| |||| ||||||||  ||| ||||| |||||||    
T  35349651 gaaaagtaaaccctcccctcccttcccctcataaacccttaatccaaacacaccctaa 35349708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 38509981 - 38510121
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||||| ||||||| ||||||  |||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||    
T  38509981 tttaaaaaattaacatcttaacacgataaacgataatataatacttcaatcacacttgatttattttagaaaaacatgttatatagtccgtagtttaaaa 38510080  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaaccct 141  Q
    ||||||| |||| |||||||||||||| |||||||||||||    
T  38510081 aagaaaactaaaccctcccctcccttcccctcctaaaccct 38510121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 3 - 158
Target Start/End: Complemental strand, 41498559 - 41498404
Alignment:
Q  3 taaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaa 102  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||| | ||||  ||||||| ||||||| ||||| |||||||||||||     
T  41498559 taaaaagttaacatattaacatgataaacgatcatataatacttcaatcacacttaacttatcgtagaaaatcatgttaaatagttcataatttaaaaac 41498460  T
Q  103 gaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    |||||||||| ||||||||| |||| |||||||||||||| ||| ||||| |||||    
T  41498459 gaaaagtaaaccctcccctcacttcccctcctaaaccctcaatccaaacacaccct 41498404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 51597825 - 51597674
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||| | ||||||||    
T  51597825 tttaaaaagttaacatattaagatgataaacaatcatataatacttcaatcacacttaatttattttaaaaaaacatgttatatagtccgtgatttaaaa 51597726  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    ||||||||||||  |||||||||||||   || ||||||||| ||| |||||    
T  51597725 aagaaaagtaaactctcccctcccttcctttcataaaccctcaatccaaaca 51597674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 12234167 - 12234010
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||| ||||||| ||||||||||||||| |  ||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  12234167 tttataaagttagcatattaacataatatatgatcatattatacatcaatcacacttgatttattttagaaaaacatgttatatagtccgtaatttaaaa 12234068  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    ||||||| |||  ||| |||||||||| |||||||||||||| ||| ||||| |||||    
T  12234067 aagaaaattaagccctaccctcccttcccctcctaaaccctcaatccaaacacaccct 12234010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 3 - 158
Target Start/End: Original strand, 40095022 - 40095178
Alignment:
Q  3 taaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttag-aaaaacatgttacatagtccataatttaaaaa 101  Q
    ||||||||||||| |||||||| |||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||  |||||||||||    
T  40095022 taaaaagttaacaaattaacatgataaacgatcatataatacttcaatcacacttaatttattttagaaaaaacatgttatatagtctgtaatttaaaaa 40095121  T
Q  102 agaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
     |||||||||| ||| || |||||| |||| |||||||||| ||| ||||| |||||    
T  40095122 cgaaaagtaaacccttccttcccttttccttctaaaccctcaatccaaacacaccct 40095178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 10392029 - 10391888
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||| ||||||| || ||||||||||||||||||||| | ||||||| ||||||||||    
T  10392029 tttaaaaagttaacatattaacatgataaacggtcatataatactttaatcacaattaatttattttagaaaaacatgtaatatagtccgtaatttaaaa 10391930  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaaccctc 142  Q
    | |||||||||| |||||||||  ||| ||||||||| ||||    
T  10391929 atgaaaagtaaaccctcccctcgtttcccctcctaaaacctc 10391888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 8529956 - 8529834
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    ||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||| |||||||| | |||||||||||| |||||   ||||||||||    
T  8529956 tttaaaaagttaacatattaacatggtaaacgatcatataatacttcaatcacacttaatttatttaaaaaaaacatgttatatagtttgtaatttaaaa 8529857  T
Q  101 aagaaaagtaaatcctcccctcc 123  Q
    |||||||||||| ||||||||||    
T  8529856 aagaaaagtaaaccctcccctcc 8529834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 50744368 - 50744490
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||| |||| ||||| ||||||| ||||||||||    
T  50744368 tttaaagagttaacatattaacatgataaacgatcatataatacttcaatcacacttaatttattttagagaaacctgttatatagtccgtaatttaaaa 50744467  T
Q  101 aagaaaagtaaatcctcccctcc 123  Q
    |||||||  ||| ||||||||||    
T  50744468 aagaaaaacaaaccctcccctcc 50744490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 42230695 - 42230559
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||| ||| || ||||||| |||    
T  42230695 tttataaagttaaaatattaacataataaacaatcatataatacttcaatcacacttaatttatttttaaaaaacatgttaaataatcaataattttaaa 42230596  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaac 138  Q
    || |||||||||| |||||||| |||  ||||||||||    
T  42230595 aa-aaaagtaaattctcccctcactttccctcctaaac 42230559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 152
Target Start/End: Original strand, 49946679 - 49946826
Alignment:
Q  5 aaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaaga 104  Q
    |||||||||||||||||||| |||||  |||||||||||||||||||||| || |||||||||| |||||||||||| ||||||  |  |||||| ||||    
T  49946679 aaaagttaacatattaacatgataaattatcatataatacttcaatcacatttaatttattttaaaaaaacatgttatatagtctctggtttaaacaaga 49946778  T
Q  105 aaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    |||||||| |||| | ||||||| || ||||| ||||| ||| |||||    
T  49946779 aaagtaaaccctcacatcccttccccgcctaatccctcaatccaaaca 49946826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 7444652 - 7444574
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgt 79  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||    
T  7444652 tttaaaaagttaacatattaacataataaacgatcatataatacttcaatcacacttggtttaatttagaaaaacatgt 7444574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 5 - 107
Target Start/End: Original strand, 26940934 - 26941036
Alignment:
Q  5 aaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaaga 104  Q
    |||||||||| |||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||||| | | ||| || |||||||||||    
T  26940934 aaaagttaacttattaacatcgtaaacagtcatataatacttcaatcacacttgatttattttagaaaaacatgttatagaatccgtattttaaaaaaga 26941033  T
Q  105 aaa 107  Q
    |||    
T  26941034 aaa 26941036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 36285661 - 36285741
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgtta 81  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  36285661 tttaaaaagttaacatattaacatgataaacgatcatataatacttcaatcacacttgatatattttaaaaaaacatgtta 36285741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 5 - 112
Target Start/End: Original strand, 45585776 - 45585883
Alignment:
Q  5 aaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaaga 104  Q
    |||||||||||||||||||| |||||| |||||||| |||||| ||||||||| |||||||||| |||||||||||| ||||||| |||||| || | ||    
T  45585776 aaaagttaacatattaacatgataaacgatcatatagtacttcgatcacacttaatttattttaaaaaaacatgttatatagtccgtaattttaagagga 45585875  T
Q  105 aaagtaaa 112  Q
    ||||||||    
T  45585876 aaagtaaa 45585883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 123
Target Start/End: Original strand, 44210994 - 44211114
Alignment:
Q  3 taaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaa 102  Q
    |||||| |||| |||  ||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||| |||| |||| |  ||||||| ||||    
T  44210994 taaaaaattaaaataacaacatgataaacgatcatataatacttcaatcacacttaatttattttagaaaaacacgttatatagactgtaatttataaaa 44211093  T
Q  103 gaaaagtaaatcctcccctcc 123  Q
    |||| ||||||| ||||||||    
T  44211094 gaaatgtaaatcttcccctcc 44211114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 33 - 160
Target Start/End: Original strand, 1085609 - 1085736
Alignment:
Q  33 atcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctc 132  Q
    |||||||||||||||||  |||||| |||||||||| |||||||| |||||| || | |||||||||||| |||||| | || || ||||||||| ||||    
T  1085609 atcatataatacttcaaaaacacttaatttattttaaaaaaacattttacatggttcgtaatttaaaaaataaaagtgagtcatctcctcccttcccctc 1085708  T
Q  133 ctaaaccctccatcgaaacagaccctaa 160  Q
    |||||||||| ||| ||||| |||||||    
T  1085709 ctaaaccctctatccaaacacaccctaa 1085736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 123
Target Start/End: Original strand, 2470831 - 2470944
Alignment:
Q  14 catattaacataataaacaatcatataatacttc----aatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagt 109  Q
    ||||||||||| ||||||| ||||||||||||||    ||||||| ||  | |||||||||||||||||||| |||||  ||||||||||||||||||||    
T  2470831 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacatgttatatagttgataatttaaaaaagaaaagt 2470930  T
Q  110 aaatcctcccctcc 123  Q
    ||| | ||||||||    
T  2470931 aaaccttcccctcc 2470944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 161
Target Start/End: Complemental strand, 33643393 - 33643265
Alignment:
Q  33 atcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctc 132  Q
    |||||||||||||||||  |||||| |||||||||| |||||||| ||||||  | | |||||||||||| |||||| | || |||| ||||||| ||||    
T  33643393 atcatataatacttcaaaaacacttaatttattttaaaaaaacattttacatttttcgtaatttaaaaaataaaagtgagtcatcccttcccttcccctc 33643294  T
Q  133 ctaaaccctccatcgaaacagaccctaag 161  Q
    ||||||| || ||| ||||| ||||||||    
T  33643293 ctaaaccttcaatctaaacacaccctaag 33643265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 41676427 - 41676363
Alignment:
Q  10 ttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaa 74  Q
    ||||||||||||||| |||||| ||||||||||||| ||||||||||| ||||||||||||||||    
T  41676427 ttaacatattaacatgataaacgatcatataatactacaatcacacttaatttattttagaaaaa 41676363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 161
Target Start/End: Complemental strand, 40095005 - 40094930
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaag 161  Q
    |||| ||||||||||| |||||||||| |||||||| ||||| |||||||||||||||||| ||||| ||||||||    
T  40095005 gtccgtaatttaaaaatgaaaagtaaaccctccccttccttcccctcctaaaccctccatccaaacacaccctaag 40094930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 6563733 - 6563628
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    ||||| ||||||| |||||||||| ||||| | |||||||||| |||||| |||| | |||||||||||||| |||||||| ||||||  | ||||||||    
T  6563733 tttaagaagttaatatattaacatgataaaga-tcatataataattcaatgacacataatttattttagaaagacatgttatatagtctgtcatttaaaa 6563635  T
Q  101 aagaaaa 107  Q
    |||||||    
T  6563634 aagaaaa 6563628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 86 - 152
Target Start/End: Original strand, 35512969 - 35513035
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    ||||||||||||||||| ||||||||  |||||||||||||| |||||||||||||||||| |||||    
T  35512969 gtccataatttaaaaaataaaagtaagccctcccctcccttcccctcctaaaccctccatccaaaca 35513035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 20 - 158
Target Start/End: Complemental strand, 35927951 - 35927814
Alignment:
Q  20 aacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctccc 119  Q
    ||||| |||||  |||||||||||||||||  | |||| |||||||||||||||| || |||||| || |||||||||||||| ||| || |  ||||||    
T  35927951 aacatgataaatgatcatataatacttcaaaaatacttaatttattttagaaaaatat-ttacattgttcataatttaaaaaataaatgtgagccctccc 35927853  T
Q  120 ctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    |||| ||| ||||||||| |||| ||| ||||| |||||    
T  35927852 ctccattcccctcctaaaacctcaatccaaacacaccct 35927814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 86 - 160
Target Start/End: Original strand, 41498576 - 41498651
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctccctt-ctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    |||| ||||||||||| |||||||||||||||||||||||| | |||||||||| ||||||| ||||| |||||||    
T  41498576 gtccgtaatttaaaaatgaaaagtaaatcctcccctcccttacccctcctaaactctccatccaaacacaccctaa 41498651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 152
Target Start/End: Original strand, 12234182 - 12234248
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    |||| ||||||||||| ||||| |||| |||||||||||||| |||||||||||||||||| |||||    
T  12234182 gtccgtaatttaaaaatgaaaactaaaccctcccctcccttcccctcctaaaccctccatccaaaca 12234248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 86 - 158
Target Start/End: Original strand, 20607388 - 20607461
Alignment:
Q  86 gtccataatttaaaaaagaaa-agtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    |||||||||| |||||| ||| |||||| |||||||||||||| |||||||||||||||||| ||||| |||||    
T  20607388 gtccataattaaaaaaaaaaatagtaaaccctcccctcccttcccctcctaaaccctccatccaaacacaccct 20607461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 91 - 159
Target Start/End: Complemental strand, 2858999 - 2858931
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagacccta 159  Q
    ||||||| ||| |||||||||| |||||||||||||  |||||||||||||||||| ||||| ||||||    
T  2858999 taatttagaaatgaaaagtaaaccctcccctccctttccctcctaaaccctccatccaaacacacccta 2858931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 142
Target Start/End: Complemental strand, 7444550 - 7444494
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctc 142  Q
    |||| |||||||||||||||||||||| |||||| ||||||||||||| ||||||||    
T  7444550 gtccgtaatttaaaaaagaaaagtaaaccctcccttcccttctcctcccaaaccctc 7444494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 158
Target Start/End: Original strand, 30010504 - 30010576
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    |||| |||||| |||| |||||||||| |||||||||||||| ||| |||||||||||||| ||||| |||||    
T  30010504 gtccgtaatttcaaaatgaaaagtaaaccctcccctcccttccccttctaaaccctccatccaaacacaccct 30010576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 152
Target Start/End: Original strand, 40709411 - 40709529
Alignment:
Q  33 atcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctc 132  Q
    |||||||||||||||||  |||||| |||| ||||  |||||| | |||||| || |||||||||||||| ||||||  | |||||||||| ||| ||||    
T  40709411 atcatataatacttcaaaaacacttaatttctttttaaaaaaccttttacattgttcataatttaaaaaataaaagt-gaccctcccctccgttcccctc 40709509  T
Q  133 ctaaaccctccatcgaaaca 152  Q
    ||||| |||| ||| |||||    
T  40709510 ctaaatcctcaatccaaaca 40709529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 86 - 160
Target Start/End: Complemental strand, 38509966 - 38509892
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    |||| ||||||||||| ||||||| || ||||| |||||||| |||||||||||||| ||| ||||| |||||||    
T  38509966 gtccgtaatttaaaaatgaaaagtgaaccctcctctcccttcccctcctaaaccctctatccaaacacaccctaa 38509892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 158
Target Start/End: Complemental strand, 1085562 - 1085489
Alignment:
Q  86 gtccataatttaaaaaag-aaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    |||| ||||||||||||| |||||||| ||||||||||| | | |||||||||||||||||| ||||| |||||    
T  1085562 gtccgtaatttaaaaaaggaaaagtaagtcctcccctccatccccctcctaaaccctccatccaaacacaccct 1085489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 20576218 - 20576269
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatca 52  Q
    |||||| |||||| |||||||||| |||||| ||||||||||||||||||||    
T  20576218 tttaaagagttaatatattaacatgataaacgatcatataatacttcaatca 20576269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 146
Target Start/End: Original strand, 25268441 - 25268496
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatc 146  Q
    ||||||||||||| |||||||| ||||||||| |||| ||| ||||||||||||||    
T  25268441 taatttaaaaaaggaaagtaaaccctcccctcacttccccttctaaaccctccatc 25268496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 139
Target Start/End: Complemental strand, 49832669 - 49832566
Alignment:
Q  36 atataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctccta 135  Q
    ||||||||||||||||||||||  ||||||||  |||||||  ||| ||  ||  |||||||||||||||||||||   |||| ||| |||| |||||||    
T  49832669 atataatacttcaatcacacttattttatttttaaaaaacactttatattatctgtaatttaaaaaagaaaagtaagctctcctctcacttcccctccta 49832570  T
Q  136 aacc 139  Q
    ||||    
T  49832569 aacc 49832566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 158
Target Start/End: Complemental strand, 26324112 - 26324014
Alignment:
Q  65 tttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccc-----tcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    ||||||||||||||||| |||||   |||||||||||||||||  ||| |||||||     ||||||| |||||||||||||| ||| ||||| |||||    
T  26324112 tttagaaaaacatgttatatagttggtaatttaaaaaagaaaatcaaaccctcccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 26324014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 138
Target Start/End: Original strand, 43553049 - 43553155
Alignment:
Q  33 atcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccat-aatttaaaaaagaaaagtaaatcctcccctcccttctcct 131  Q
    ||||||||||| |||| | |||||| |||||||||||| ||||| |||| ||| ||| | |||||||||| ||||||||||| || || ||| |||  ||    
T  43553049 atcatataatatttcagtaacacttaatttattttagagaaacaagttatataatccgtaaatttaaaaatgaaaagtaaattctaccatcctttcctct 43553148  T
Q  132 cctaaac 138  Q
    |||||||    
T  43553149 cctaaac 43553155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 160
Target Start/End: Original strand, 35927989 - 35928058
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    |||||||||||||||||||||||| ||||  |||||| ||| |||| ||||| ||| ||||| |||||||    
T  35927989 taatttaaaaaagaaaagtaaatcatccctccccttccccttctaagccctcaatccaaacacaccctaa 35928058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 160
Target Start/End: Complemental strand, 40709359 - 40709290
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    ||||||||||||||||||||| |||||| |||||||| |||| |||||| |  ||| ||||| |||||||    
T  40709359 taatttaaaaaagaaaagtaagtcctcctctcccttcccctcttaaaccttaaatccaaacacaccctaa 40709290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 109
Target Start/End: Complemental strand, 25268389 - 25268313
Alignment:
Q  33 atcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagt 109  Q
    |||||||||||||||||  |||||| |||||||||| ||| |||| |||||| || || ||||||||| | ||||||    
T  25268389 atcatataatacttcaaaaacacttaatttattttaaaaatacattttacattgttcaaaatttaaaatataaaagt 25268313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 161
Target Start/End: Complemental strand, 20576205 - 20576130
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaag 161  Q
    |||| ||||||||||| ||||  ||||  ||||||||||||| |||||||||||||| ||| ||||| || |||||    
T  20576205 gtccgtaatttaaaaatgaaatctaaactctcccctcccttcccctcctaaaccctctatccaaacacactctaag 20576130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 23536844 - 23536786
Alignment:
Q  94 tttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    ||||||| |||||| ||||  ||||| ||||||||||||||||| |||||||| |||||    
T  23536844 tttaaaatagaaaattaaacactcccatcccttctcctcctaaatcctccatccaaaca 23536786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 123
Target Start/End: Original strand, 51303695 - 51303784
Alignment:
Q  33 atcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcc 123  Q
    ||||||||||| ||||||||||||| ||| | |||| |||||||| ||| |  || |||||||| ||||||||||| ||| ||||| ||||    
T  51303695 atcatataatagttcaatcacacttaattga-tttaaaaaaacattttatagtgttcataattttaaaaagaaaaggaaaccctccactcc 51303784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 160
Target Start/End: Original strand, 525221 - 525346
Alignment:
Q  36 atataatacttcaatcacacttgatttatttt-agaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcct 134  Q
    |||||||||||||| || |||| ||||||||| | |||||||| |||| | ||   |||||||||||  |||||| ||  || || ||||||| | ||||    
T  525221 atataatacttcaaacaaacttaatttattttaaaaaaaacattttacgttgtttgtaatttaaaaattaaaagtgaactcttccttcccttcccgtcct 525320  T
Q  135 aaaccctccatcgaaacagaccctaa 160  Q
    |||||||| ||| ||||| |||||||    
T  525321 aaaccctcaatccaaacacaccctaa 525346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 158
Target Start/End: Complemental strand, 35349536 - 35349466
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    |||| ||||||||||| |||||||||| ||||||  ||| || |||| ||||||||||||| ||||| |||||    
T  35349536 gtccgtaatttaaaaatgaaaagtaaaccctccc--cccctcccctcttaaaccctccatccaaacacaccct 35349466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 42742416 - 42742469
Alignment:
Q  20 aacataataaacaatcatataatacttcaatcacacttgatttattttagaaaa 73  Q
    ||||| ||||| | ||||||| |||||||||||||||| |||||||||| ||||    
T  42742416 aacatgataaatagtcatatagtacttcaatcacacttaatttattttaaaaaa 42742469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 122
Target Start/End: Complemental strand, 44210979 - 44210943
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctc 122  Q
    |||||||||||||||| |||||||||| |||||||||    
T  44210979 gtccataatttaaaaacgaaaagtaaaccctcccctc 44210943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 110; Significance: 2e-55; HSPs: 69)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 7544293 - 7544136
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  7544293 tttaaaaagttagcatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttatatagtccgtaatttaaaa 7544194  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    ||||||| | |  |||||||||||||| | |||||||||||| ||| ||||| |||||    
T  7544193 aagaaaatttagccctcccctcccttcccttcctaaaccctcaatccaaacacaccct 7544136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 13634868 - 13634711
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||||||||||||||||||||| |||||| ||||||||||| ||||||||||| | ||||||||||||||||||||||| ||||||| | ||||||||    
T  13634868 tttaaaaagttaacatattaacatgataaacgatcatataataattcaatcacacataatttattttagaaaaacatgttatatagtccgttatttaaaa 13634769  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    |||||||||||| |||||||||||||| |||||||||||||| ||| ||||| |||||    
T  13634768 aagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 13634711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 3 - 158
Target Start/End: Complemental strand, 26415048 - 26414893
Alignment:
Q  3 taaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaa 102  Q
    |||||||||||||||||||||| |||||| | ||||||||||||||||||||||| || |||||||||||||||||| | ||||||| |||||||||||     
T  26415048 taaaaagttaacatattaacatgataaacgaccatataatacttcaatcacacttaatatattttagaaaaacatgtcatatagtccgtaatttaaaaac 26414949  T
Q  103 gaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    |||||||||| ||||||||||||||||||||||||||||| ||| ||||| |||||    
T  26414948 gaaaagtaaaccctcccctcccttctcctcctaaaccctcaatccaaacacaccct 26414893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 9857037 - 9856915
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  9857037 tttaaaaagttaacatattaacataataaacgatcatataatacttcaatcacacttgatttattttagaaaaacatgttatatagtccttaatttaaaa 9856938  T
Q  101 aagaaaagtaaatcctcccctcc 123  Q
    ||||||| ||||  |||||||||    
T  9856937 aagaaaactaaactctcccctcc 9856915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 16938636 - 16938477
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||| ||||||||| ||||||| |||||  ||||||||||| ||||||||||||| |||||||||||| |||||||||| ||||||| ||| ||||||    
T  16938636 tttaaagagttaacatgttaacatgataaatgatcatataatatttcaatcacacttaatttattttagagaaacatgttatatagtccgtaacttaaaa 16938537  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    |||||||  ||| |||||||||||||| |||||||||||||| ||| ||||| |||||||    
T  16938536 aagaaaaacaaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 16938477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 21 - 152
Target Start/End: Original strand, 2550459 - 2550590
Alignment:
Q  21 acataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccc 120  Q
    |||| |||||||||||||||||||||||||||||| | ||||||| ||||||||||||||| |||||||  |  |||||||||||||||||| |||||||    
T  2550459 acatgataaacaatcatataatacttcaatcacacgtaatttattatagaaaaacatgttatatagtccgaatcttaaaaaagaaaagtaaaccctcccc 2550558  T
Q  121 tcccttctcctcctaaaccctccatcgaaaca 152  Q
    ||||||| |||||||||||||| ||| |||||    
T  2550559 tcccttcccctcctaaaccctcaatccaaaca 2550590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 5 - 160
Target Start/End: Original strand, 4373657 - 4373812
Alignment:
Q  5 aaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaaga 104  Q
    |||||||||||||||||||| |||||  ||||||||||| ||||||||||||| |||||||||  |||||| ||||| ||||||| ||||||||||||||    
T  4373657 aaaagttaacatattaacatgataaatgatcatataatatttcaatcacacttaatttatttttaaaaaacttgttatatagtccgtaatttaaaaaaga 4373756  T
Q  105 aaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    |||||||||||||| ||   ||| | |||||||||||| ||| ||||| |||||||    
T  4373757 aaagtaaatcctccactattttcccttcctaaaccctcaatccaaacacaccctaa 4373812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 28279563 - 28279690
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttag-aaaaacatgttacatagtccataatttaaa 99  Q
    |||||||||||||||||||||||| |||||  |||||||||||||||||||||||||  |||||||||| |||||||||||| ||| |||||||||||||    
T  28279563 tttaaaaagttaacatattaacatgataaatgatcatataatacttcaatcacacttagtttattttagaaaaaacatgttatatattccataatttaaa 28279662  T
Q  100 aaagaaaagtaaatcctcccctcccttc 127  Q
    || |||||||||| |||| |||||||||    
T  28279663 aaggaaaagtaaaccctctcctcccttc 28279690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 10072734 - 10072856
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||| |||| ||||||||||||||||||||||| |  |||  ||||||||||    
T  10072734 tttaaaaagttaacatattaacatgataaacgatcatataatacttcaatcatacttaatttattttagaaaaacatgttataccgtcggtaatttaaaa 10072833  T
Q  101 aagaaaagtaaatcctcccctcc 123  Q
    |||||||||||||| || |||||    
T  10072834 aagaaaagtaaatcttctcctcc 10072856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 36363189 - 36363038
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||| ||||||||||||||| ||| ||||||||| |||||| |||||||| |||||||||||||||||||||||||||||| ||||| | || ||||||     
T  36363189 tttagaaagttaacatattagcatgataaacaatgatataaaacttcaatgacacttgatttattttagaaaaacatgttatatagtacgtagtttaaac 36363090  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    ||||||| ||||  ||||||||| ||| ||| |||||||||| ||| |||||    
T  36363089 aagaaaattaaactctcccctccattccccttctaaaccctcaatccaaaca 36363038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 152
Target Start/End: Original strand, 16501881 - 16502030
Alignment:
Q  5 aaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttag-aaaaacatgttacatagtccataatttaaaaaag 103  Q
    ||||||||||||||||||||||||||  ||||||||| |||| |||||||||||||||||||||| ||||| ||| || ||||||| ||||||||||||     
T  16501881 aaaagttaacatattaacataataaatgatcatataaaactttaatcacacttgatttattttagaaaaaatatgatatatagtccgtaatttaaaaaat 16501980  T
Q  104 aaaagtaaatcct-cccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    |||||||| | || |||||| |||  |||||||||||||| ||| |||||    
T  16501981 aaaagtaatttctccccctctctttccctcctaaaccctcaatccaaaca 16502030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 9798699 - 9798825
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||||||| || || ||||||| | |||| |||||||||||||||||||||| || |||||||| |||||||||||||| ||| ||  |||||| |||    
T  9798699 tttaaaaagtcaatattttaacatgaaaaacgatcatataatacttcaatcacaattaatttatttaagaaaaacatgttatataatctgtaattttaaa 9798798  T
Q  101 aagaaaagtaaatcctcccctcccttc 127  Q
    |||||||||||||||| ||||||||||    
T  9798799 aagaaaagtaaatccttccctcccttc 9798825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 3 - 152
Target Start/End: Original strand, 36392239 - 36392387
Alignment:
Q  3 taaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaa 102  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||| || |||||||| |||| || ||| ||||||| |||||||||||     
T  36392239 taaaaagttaacatattaacatgataaacgatcatataatacttcaatcacacttaatctattttag-aaaatatattatatagtccgtaatttaaaaac 36392337  T
Q  103 gaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    ||||  ||||  | || ||| |||| |||||||||||||| ||| |||||    
T  36392338 gaaatataaacacaccgctctcttcccctcctaaaccctcaatccaaaca 36392387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 37551562 - 37551454
Alignment:
Q  3 taaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaa 102  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||| | |||||||||  |||||| | ||| |||||||||||||||||||     
T  37551562 taaaaagttaacatattaacatgataaacgatcatataatacttcaatcacacataatttatttttaaaaaac-ttttatatagtccataatttaaaaac 37551464  T
Q  103 gaaaagtaaa 112  Q
    ||||||||||    
T  37551463 gaaaagtaaa 37551454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 37607049 - 37606941
Alignment:
Q  3 taaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaa 102  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||  | |||||||||| |||||||| ||| ||||||| |||||||||||     
T  37607049 taaaaagttaacatattaacatgataaacgatcatataatacttcaatcacatataatttattttaaaaaaacat-ttatatagtccttaatttaaaaac 37606951  T
Q  103 gaaaagtaaa 112  Q
    ||||||||||    
T  37606950 gaaaagtaaa 37606941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 37654392 - 37654284
Alignment:
Q  3 taaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaa 102  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||| | |||||||||  |||||| | ||| |||||||||||||||||||     
T  37654392 taaaaagttaacatattaacatgataaacgatcatataatacttcaatcacacataatttatttttaaaaaac-ttttatatagtccataatttaaaaac 37654294  T
Q  103 gaaaagtaaa 112  Q
    ||||||||||    
T  37654293 gaaaagtaaa 37654284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 21 - 158
Target Start/End: Complemental strand, 40815433 - 40815297
Alignment:
Q  21 acataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccc 120  Q
    |||| ||||||||| |||||||| |||||||||||||  ||||||||| |||||||||||| ||||||  ||||||||||||||||||||||||||| |     
T  40815433 acatgataaacaattatataatatttcaatcacacttt-tttattttataaaaacatgttatatagtctgtaatttaaaaaagaaaagtaaatcctctct 40815335  T
Q  121 tcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    ||||||| ||||||||| | || ||| ||||| |||||    
T  40815334 tcccttcccctcctaaatcttcaatccaaacacaccct 40815297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 142
Target Start/End: Complemental strand, 10476174 - 10476042
Alignment:
Q  12 aacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgt-tacatagtccataa-tttaaaaaagaaaagt 109  Q
    |||||||||| || |||||| || |||||||||||||||||||||| ||||||||||||||||||||| || ||| ||  ||| ||||||||||||||||    
T  10476174 aacatattaagatgataaacgattatataatacttcaatcacacttaatttattttagaaaaacatgtatatataatctgtaattttaaaaaagaaaagt 10476075  T
Q  110 aaatcctcccctcccttctcctcctaaaccctc 142  Q
    ||| |||| | ||||||| ||||||||||||||    
T  10476074 aaaccctctcatcccttcccctcctaaaccctc 10476042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 42681610 - 42681444
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatt----- 95  Q
    |||||||| |||| ||| |||||| |||||  |||||||||||||| |||||||||  | ||||||||||||||||||||| ||||||| |||||         
T  42681610 tttaaaaaattaaaataataacatgataaatgatcatataatactttaatcacactaaaattattttagaaaaacatgttatatagtccgtaattaaaaa 42681511  T
Q  96 taaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaagc 162  Q
     |||||| |||||||||||||||||||| ||| |||| ||||||||| ||| ||||| ||| |||||    
T  42681510 aaaaaaaaaaaagtaaatcctcccctcctttcccctcttaaaccctcaatccaaacacaccttaagc 42681444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 11 - 152
Target Start/End: Complemental strand, 11757024 - 11756884
Alignment:
Q  11 taacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagta 110  Q
    |||||||||||||| |||||  |||||||||||||| |||||||||| |||||||||||| |||||||||| ||||| | |||||||||||| ||||  |    
T  11757024 taacatattaacatcataaatgatcatataatactttaatcacacttaatttattttagagaaacatgttatatagttcgtaatttaaaaaataaaaaca 11756925  T
Q  111 aatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    ||  ||||| |||| || |||||||||||||| ||| |||||    
T  11756924 aactctcccatccc-tcccctcctaaaccctcaatccaaaca 11756884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 37779258 - 37779151
Alignment:
Q  3 taaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaa 102  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||  | |||||||||| |||||||| ||| ||||||| |||||||||||     
T  37779258 taaaaagttaacatattaacatgataaacgatcatataatacttcaatcacatataatttattttaaaaaaacat-tta-atagtccttaatttaaaaac 37779161  T
Q  103 gaaaagtaaa 112  Q
    ||||||||||    
T  37779160 gaaaagtaaa 37779151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 8502922 - 8503017
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataattt 96  Q
    ||||||||||||||| ||||| || ||| ||||| | |||||||||||||||||||| ||||||||||||||| ||||||| ||||||| ||||||    
T  8502922 tttaaaaagttaacaaattaatatgatacacaattacataatacttcaatcacacttaatttattttagaaaagcatgttatatagtccgtaattt 8503017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 86 - 160
Target Start/End: Complemental strand, 33744265 - 33744191
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| ||||| |||||||    
T  33744265 gtccataatttaaaaaagaaaagtaaaccctcccctcccttctccgccttaaccctccatccaaacacaccctaa 33744191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 10650546 - 10650434
Alignment:
Q  41 atacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctccc--ttctcctcctaaac 138  Q
    ||||||||||||||||| ||||||||||||||||||| | | |  |||| |||||||||||  |||||||||||||||||||||  ||| |||||||||     
T  10650546 atacttcaatcacacttaatttattttagaaaaacatttcatagtgtccgtaatttaaaaataaaaagtaaatcctcccctcccttttcccctcctaaat 10650447  T
Q  139 cctccatcgaaac 151  Q
    |||||||| ||||    
T  10650446 cctccatccaaac 10650434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 32 - 152
Target Start/End: Complemental strand, 22022976 - 22022853
Alignment:
Q  32 aatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaa---aaaagaaaagtaaatcctcccctcccttct 128  Q
    |||| ||||||  ||||||||||||| |||||||||||||||| |||||| ||||||| ||||||||   |||| |||| ||||||||| ||||| |||     
T  22022976 aatcctataatctttcaatcacacttaatttattttagaaaaatatgttatatagtccgtaatttaaaaaaaaaaaaaactaaatcctctcctccattcc 22022877  T
Q  129 cctcctaaaccctccatcgaaaca 152  Q
    |||||||||||||| ||| |||||    
T  22022876 cctcctaaaccctcaatccaaaca 22022853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 86 - 158
Target Start/End: Complemental strand, 14245160 - 14245088
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||| |||||    
T  14245160 gtccgtaatttaaaaaagaaaagtaaatcctcccctcccttcccctcctaaaccctcaatccaaacacaccct 14245088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 17024311 - 17024391
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgtta 81  Q
    |||||||||||| ||||||||||| | |||| |||||||||||||||||||  |||| |||||||||||||||||||||||    
T  17024311 tttaaaaagttatcatattaacatgaaaaacgatcatataatacttcaatcgtacttaatttattttagaaaaacatgtta 17024391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 20146953 - 20147114
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatt----------tattttagaaaaacatgttacatagtcca 90  Q
    |||||||||||||||||||||||| |||| | ||||||||||| ||||||||||||| |||          |||||||||||||||||| | ||| |||     
T  20146953 tttaaaaagttaacatattaacatgataagcgatcatataatatttcaatcacacttaattacacttaatttattttagaaaaacatgt-atataatccg 20147051  T
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    ||||||||||| ||||||||||     |||||||||| |||||||||||||| ||| ||||| |||||    
T  20147052 taatttaaaaatgaaaagtaaa-----ccctcccttcccctcctaaaccctcaatccaaacacaccct 20147114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 14681625 - 14681476
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    ||||||||||||  |||||||||| ||||||| ||||||| | ||||||||||| || |||||||||| |||||||||||| ||| ||  ||||||||||    
T  14681625 tttaaaaagttat-atattaacatgataaacagtcatatattccttcaatcacatttaatttattttaaaaaaacatgttatataatctgtaatttaaaa 14681527  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    ||||||| | || ||  | || ||||| |||||||||||||| ||| |||||    
T  14681526 aagaaaatttaa-ccatcacttccttcccctcctaaaccctcaatccaaaca 14681476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 86 - 161
Target Start/End: Original strand, 34980982 - 34981057
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaag 161  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||  ||||| ||||||||    
T  34980982 gtccataatttaaaaaagaaaagtaagtcctcccctcccttcccctcttaaaccctccattaaaacacaccctaag 34981057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 158
Target Start/End: Complemental strand, 10204710 - 10204576
Alignment:
Q  24 taataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcc 123  Q
    |||||||  |||||||||||||||||  |||||| |||||||||| ||| |||| |||||| ||   |||||||||||| |||||| |  |||| |||||    
T  10204710 taataaatgatcatataatacttcaaaaacacttaatttattttaaaaagacattttacattgttggtaatttaaaaaataaaagtgagccctcacctcc 10204611  T
Q  124 cttctcctcctaaaccctccatcgaaacagaccct 158  Q
    |||| |||||||||||||| ||| ||||| |||||    
T  10204610 cttcccctcctaaaccctcgatccaaacacaccct 10204576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 86 - 152
Target Start/End: Original strand, 1657985 - 1658051
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    |||| ||||||||||| |||||||||| |||||||||||||| |||||||||||||||||| |||||    
T  1657985 gtccgtaatttaaaaatgaaaagtaaaccctcccctcccttcccctcctaaaccctccatccaaaca 1658051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 33 - 158
Target Start/End: Original strand, 15986743 - 15986868
Alignment:
Q  33 atcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctc 132  Q
    |||||||||||||| ||  |||||| |||||||||| ||| |||| |||||| || | |||||||||||| |||||| |  ||||| || ||||| ||||    
T  15986743 atcatataatactttaaaaacacttaatttattttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcctcttccttcccctc 15986842  T
Q  133 ctaaaccctccatcgaaacagaccct 158  Q
    |||||||||| ||| ||||| |||||    
T  15986843 ctaaaccctcaatccaaacacaccct 15986868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 33 - 158
Target Start/End: Original strand, 40305784 - 40305909
Alignment:
Q  33 atcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctc 132  Q
    |||||||| ||||||||  || ||| |||||||||  |||||||| |||||| |  | |||||||||||| |||| | | | ||||||||||||||||||    
T  40305784 atcatatagtacttcaaaaacccttaatttattttgaaaaaacattttacattggtcgtaatttaaaaaataaaaatgagttctcccctcccttctcctc 40305883  T
Q  133 ctaaaccctccatcgaaacagaccct 158  Q
    |||||||||| ||| ||||| |||||    
T  40305884 ctaaaccctcaatccaaacacaccct 40305909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 10043390 - 10043271
Alignment:
Q  20 aacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctccc 119  Q
    ||||| ||||| ||||||||||||||||||  |||||| |||| ||||| || || || |||||| || | |||||||||||| |||||| | || ||||    
T  10043390 aacattataaataatcatataatacttcaaaaacacttaatttcttttaaaacaatattttacattgttcgtaatttaaaaaataaaagtgagtcatccc 10043291  T
Q  120 ctcccttctcctcctaaacc 139  Q
    |||||||| |||| ||||||    
T  10043290 ctcccttcccctcataaacc 10043271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 20513532 - 20513681
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatat----aatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataattt 96  Q
    |||||||||||||||||||| ||| |||||| |||||||    |||||||||||||||||| |||||||||| |||||||            | ||||||    
T  20513532 tttaaaaagttaacatattatcatgataaacgatcatatatataatacttcaatcacacttaatttattttataaaaaca------------cgtaattt 20513619  T
Q  97 aaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    |||||||||||||||||||| || ||  ||| | |||||||||||| ||| ||||| |||||    
T  20513620 aaaaaagaaaagtaaatccttccttcttttcgcttcctaaaccctcaatccaaacacaccct 20513681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 152
Target Start/End: Complemental strand, 34980932 - 34980816
Alignment:
Q  36 atataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctccta 135  Q
    ||||||||||||||  |||||| |||||||||| ||||| || |||| | || | |||||||||||  |||||| || ||| |||||||||| |||||||    
T  34980932 atataatacttcaaaaacacttaatttattttaaaaaaatattttacgttgttcgtaatttaaaaattaaaagtgaacccttccctcccttcccctccta 34980833  T
Q  136 aaccctccatcgaaaca 152  Q
    |||| || ||| |||||    
T  34980832 aaccttcaatccaaaca 34980816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 123
Target Start/End: Complemental strand, 5688535 - 5688448
Alignment:
Q  36 atataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcc 123  Q
    ||||||||||||||  |||||| || ||||||| |||||||| |||||| || | |||||||||||| |||||| || ||||||||||    
T  5688535 atataatacttcaaaaacacttaatctattttaaaaaaacattttacattgttcgtaatttaaaaaataaaagtgaaccctcccctcc 5688448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 86 - 161
Target Start/End: Original strand, 14245218 - 14245293
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaag 161  Q
    |||| ||||||||||| |||||  ||| |||||||||||||| |||||||||||||| ||| ||||| ||||||||    
T  14245218 gtccgtaatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaag 14245293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 95 - 161
Target Start/End: Original strand, 10204757 - 10204823
Alignment:
Q  95 ttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaag 161  Q
    ||||||||||||||||| ||||||||||||||| |||||||||| |||  || ||||| ||||||||    
T  10204757 ttaaaaaagaaaagtaagtcctcccctcccttcccctcctaaactctctttccaaacacaccctaag 10204823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 91 - 157
Target Start/End: Original strand, 13634888 - 13634954
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccc 157  Q
    ||||||||||| |||||||||  |||||||||||||| |||||||||||||| ||| ||||| ||||    
T  13634888 taatttaaaaatgaaaagtaacccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 13634954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 95 - 161
Target Start/End: Complemental strand, 15986687 - 15986621
Alignment:
Q  95 ttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaag 161  Q
    ||||||||||||| ||| ||||||||||||||| ||||||||||||||  || ||||| ||||||||    
T  15986687 ttaaaaaagaaaattaagtcctcccctcccttcccctcctaaaccctctttccaaacacaccctaag 15986621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 160
Target Start/End: Original strand, 10476205 - 10476274
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    |||||||||||  | |||||||  ||||||||||||| |||||||||||||||||| ||||| |||||||    
T  10476205 taatttaaaaattataagtaaacactcccctcccttcccctcctaaaccctccatccaaacacaccctaa 10476274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 112
Target Start/End: Original strand, 11419306 - 11419359
Alignment:
Q  59 atttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaa 112  Q
    ||||||||||||||||||||||| |||  || ||||||||||||||||||||||    
T  11419306 atttattttagaaaaacatgttatataacccgtaatttaaaaaagaaaagtaaa 11419359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 10043429 - 10043476
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaac 138  Q
    ||||||||||||||||||| | |||||||||||||| |||||||||||    
T  10043429 taatttaaaaaagaaaagtgagtcctcccctcccttttcctcctaaac 10043476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 43481 - 43407
Alignment:
Q  54 acttgatttattttagaaaaa-catgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcccttc 127  Q
    |||| |||||||||| ||||| ||||||| ||| ||| |||||||||||||| ||||||||||||  ||||||||    
T  43481 acttaatttattttaaaaaaaacatgttatataatccctaatttaaaaaagagaagtaaatcctcatctcccttc 43407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 152
Target Start/End: Original strand, 7544308 - 7544374
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    |||| ||||||||||| |||||  ||| |||||||| ||||| |||||||||||||||||| |||||    
T  7544308 gtccgtaatttaaaaatgaaaaccaaaccctccccttccttcccctcctaaaccctccatccaaaca 7544374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 152
Target Start/End: Complemental strand, 11437011 - 11436945
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    |||| ||||||||||||| |||||||  ||||| |||||||| |||||||||||||| ||| |||||    
T  11437011 gtccgtaatttaaaaaaggaaagtaagccctcctctcccttcccctcctaaaccctcaatccaaaca 11436945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 152
Target Start/End: Original strand, 11757075 - 11757141
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    |||| ||||||||||| ||||  |||| |||||||||||||| |||| ||||||||||||| |||||    
T  11757075 gtccgtaatttaaaaatgaaatctaaaccctcccctcccttcccctcttaaaccctccatccaaaca 11757141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 124
Target Start/End: Complemental strand, 13298386 - 13298300
Alignment:
Q  38 ataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctccc 124  Q
    ||||||||| |||||||||| |||||| ||  |||||| | ||| || ||||  |||||||||||||||||||| | ||||||||||    
T  13298386 ataatacttaaatcacacttaatttatattgcaaaaacgttttatattgtccgcaatttaaaaaagaaaagtaagttctcccctccc 13298300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 159
Target Start/End: Original strand, 14684604 - 14684729
Alignment:
Q  36 atataatacttcaatcacacttgatttattttagaaaaa--catgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcc 133  Q
    |||||||| ||||||||||||| |||||||| | |||||  ||| ||| || | || ||||| |||||||||||||||  ||||| ||| || | |||||    
T  14684604 atataatatttcaatcacacttaatttatttaaaaaaaaaacattttatattgcccgtaattaaaaaaagaaaagtaagccctcctctctctgcccctcc 14684703  T
Q  134 taaaccctccatcgaaacagacccta 159  Q
    ||||||||  ||| ||||| ||||||    
T  14684704 taaaccctaaatccaaacacacccta 14684729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 142
Target Start/End: Original strand, 33744299 - 33744421
Alignment:
Q  20 aacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctccc 119  Q
    ||||| |||||  |||||||| | ||||||  |||||| |||||||||| |||||||| ||  || || | |||||||||| | |||||| |  ||||||    
T  33744299 aacatgataaatgatcatatatttcttcaaaaacacttaatttattttaaaaaaacattttgaattgttcgtaatttaaaatataaaagtgagccctccc 33744398  T
Q  120 ctcccttctcctcctaaaccctc 142  Q
    ||||||||  |||||||||||||    
T  33744399 ctcccttcatctcctaaaccctc 33744421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 12036005 - 12035936
Alignment:
Q  89 cataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    |||||||||||||||||||  || |||||| |||||||| ||||||||||| || ||| ||||| |||||    
T  12036005 cataatttaaaaaagaaaaacaagtcctcctctcccttcccctcctaaaccatctatccaaacacaccct 12035936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 152
Target Start/End: Original strand, 36363209 - 36363270
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    ||||||||||| ||||||| ||  ||| ||||||||| |||||||||||||||||| |||||    
T  36363209 taatttaaaaatgaaaagtgaactctctcctcccttcccctcctaaaccctccatccaaaca 36363270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 39966066 - 39966139
Alignment:
Q  28 aaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaa 101  Q
    |||||||||||||||| |||||||||  || |||||||| | ||||| |||||| ||| ||| |||||||||||    
T  39966066 aaacaatcatataataattcaatcacgtttaatttatttaaaaaaaatatgttatataatccgtaatttaaaaa 39966139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 152
Target Start/End: Original strand, 8551524 - 8551656
Alignment:
Q  20 aacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctccc 119  Q
    ||||| |||||  |||||||||||||| ||  |||||| |||||||||  ||| |||| |||||| |  | |||||||||||| |||||| |  || |||    
T  8551524 aacattataaatgatcatataatactttaaaaacacttaatttatttttaaaacacattttacattgctcgtaatttaaaaaataaaagtgagacccccc 8551623  T
Q  120 ctcccttctcctcctaaaccctccatcgaaaca 152  Q
    ||| |||| ||||||||||| || ||| |||||    
T  8551624 ctctcttcccctcctaaaccttcaatccaaaca 8551656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 126
Target Start/End: Complemental strand, 21581071 - 21580979
Alignment:
Q  34 tcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctccctt 126  Q
    |||||| |||||||||  |||||| |||||||||| ||||| || |||||| || | ||||||| |||| |||||| |  |||||||||||||    
T  21581071 tcatatgatacttcaaaaacacttaatttattttaaaaaaatattttacattgttcgtaatttagaaaataaaagtgacccctcccctccctt 21580979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 29002304 - 29002376
Alignment:
Q  12 aacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacat 84  Q
    ||||||||||||| |||||| ||||||||||||| |||||| | || |||||||||  |||||  ||||||||    
T  29002304 aacatattaacatgataaacgatcatataatactacaatcatatttaatttatttttaaaaaatttgttacat 29002376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 91 - 158
Target Start/End: Original strand, 16938656 - 16938723
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    ||||||||||| ||||  |||| |||||||||| |||  ||||||||||||||||| ||||| |||||    
T  16938656 taatttaaaaatgaaatctaaaccctcccctccattcctctcctaaaccctccatccaaacacaccct 16938723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 152
Target Start/End: Original strand, 21581119 - 21581185
Alignment:
Q  86 gtccataatttaaaaaa-gaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    ||||||||||||||||| ||||||| | ||  ||||||||||| |||||||||||||||||| |||||    
T  21581119 gtccataatttaaaaaaagaaaagttagtca-cccctcccttcccctcctaaaccctccatccaaaca 21581185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 161
Target Start/End: Complemental strand, 28279548 - 28279473
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaag 161  Q
    |||||||||||||||| |||||||||||  || || || ||| | ||| |||||||||||| ||||| ||||||||    
T  28279548 gtccataatttaaaaatgaaaagtaaattttcaccccctttcccatcccaaaccctccatccaaacacaccctaag 28279473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 161
Target Start/End: Original strand, 37551585 - 37551652
Alignment:
Q  94 tttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaag 161  Q
    |||||||| |||||||||| | ||| |||||||  |||| ||||||||||||| ||||| ||||||||    
T  37551585 tttaaaaatgaaaagtaaaccatcctctccctttccctcgtaaaccctccatccaaacacaccctaag 37551652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 161
Target Start/End: Original strand, 37654415 - 37654482
Alignment:
Q  94 tttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaag 161  Q
    |||||||| |||||||||| | ||| |||||||  |||| ||||||||||||| ||||| ||||||||    
T  37654415 tttaaaaatgaaaagtaaaccatcctctccctttccctcgtaaaccctccatccaaacacaccctaag 37654482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 161
Target Start/End: Complemental strand, 40305710 - 40305667
Alignment:
Q  118 ccctcccttctcctcctaaaccctccatcgaaacagaccctaag 161  Q
    |||||||||| |||||||||||||||||| ||||| ||||||||    
T  40305710 ccctcccttcccctcctaaaccctccatccaaacacaccctaag 40305667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 22023521 - 22023483
Alignment:
Q  4 aaaaagttaacatattaacataataaacaatcatataat 42  Q
    ||||||||||||||||||||| |||||| ||||||||||    
T  22023521 aaaaagttaacatattaacatgataaacgatcatataat 22023483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 120
Target Start/End: Original strand, 35176831 - 35176865
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccc 120  Q
    |||||||||||||||||||||||||||| ||||||    
T  35176831 gtccataatttaaaaaagaaaagtaaattctcccc 35176865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 152
Target Start/End: Complemental strand, 9798679 - 9798618
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    ||||||||||| ||||||||||  ||| | |||||| |||||||||| |||||||| |||||    
T  9798679 taatttaaaaatgaaaagtaaactctcacatcccttttcctcctaaatcctccatccaaaca 9798618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 27110185 - 27110120
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattt 66  Q
    |||||||| |||| | ||||| ||||||||  ||||||||||| || |||||||||| ||||||||    
T  27110185 tttaaaaatttaaaacattaatataataaatgatcatataatattttaatcacacttaatttattt 27110120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 5688589 - 5688637
Alignment:
Q  113 tcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaag 161  Q
    ||||||| ||||||| |||||||||||||| ||| ||||| ||||||||    
T  5688589 tcctcccttcccttcccctcctaaaccctcaatccaaacacaccctaag 5688637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 108; Significance: 3e-54; HSPs: 69)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 36347628 - 36347787
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||    
T  36347628 tttaaatagttaacatattaacatgataaacaattatataatacttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaa 36347727  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    ||||||||||||  ||||| ||||||| |||||||||||||| ||| ||||| |||||||    
T  36347728 aagaaaagtaaactctcccttcccttcccctcctaaaccctcaatccaaacacaccctaa 36347787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 15224781 - 15224938
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    ||||||||| |||||||||||||| |||||  ||||||||||||||||||||||||| ||||||| ||||||||||||||| |||| || ||||||||||    
T  15224781 tttaaaaagctaacatattaacatgataaatgatcatataatacttcaatcacacttaatttattctagaaaaacatgttatatagcccgtaatttaaaa 15224880  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    |||||||||||| | |||||||||||| |||||||||||||  ||| ||||| |||||    
T  15224881 aagaaaagtaaaccatcccctcccttcccctcctaaacccttgatccaaacacaccct 15224938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 23748252 - 23748130
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||||| ||||||||||||| ||||||| || |||||||    
T  23748252 tttaaaaagttaacatattaacatgataaacgataatataatacttcaatcacacttgatttatttttgaaaaacatgttatatagtccgtagtttaaaa 23748153  T
Q  101 aagaaaagtaaatcctcccctcc 123  Q
    ||||||| |||| ||||||||||    
T  23748152 aagaaaactaaaccctcccctcc 23748130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 39732818 - 39732974
Alignment:
Q  3 taaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaa 102  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||| |||| |||||||||||||||||||| || ||||||| |||||||||||     
T  39732818 taaaaagttaacatattaacatgataaacgatcatataatacttcaatcatacttaatttattttagaaaaacatg-tatatagtccgtaatttaaaaac 39732916  T
Q  103 gaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    |||||||||||| |||| | ||||| ||||  ||||| || ||| ||||| |||||||    
T  39732917 gaaaagtaaatcatccctttccttcccctctcaaaccttcaatccaaacacaccctaa 39732974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 5 - 136
Target Start/End: Complemental strand, 2241563 - 2241432
Alignment:
Q  5 aaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaaga 104  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||| | ||| ||||||| ||||||| || | |    
T  2241563 aaaatttaacatattaacatgataaacaatcatataatacttcaattacacttaatttattttagaaaaacgtattatatagtccgtaatttataataaa 2241464  T
Q  105 aaagtaaatcctcccctcccttctcctcctaa 136  Q
    ||||||||  ||||||||||||| ||||||||    
T  2241463 aaagtaaactctcccctcccttcccctcctaa 2241432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 33 - 160
Target Start/End: Complemental strand, 35736300 - 35736173
Alignment:
Q  33 atcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctc 132  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||  |||||| | ||||||||||||||| |||  |||||||||||||| ||||    
T  35736300 atcatataatacttcagtcacacttcatttattttagaaaaacatgttatctagtccgtgatttaaaaaagaaaattaacccctcccctcccttcccctc 35736201  T
Q  133 ctaaaccctccatcgaaacagaccctaa 160  Q
    |||||||||| ||| ||||| |||||||    
T  35736200 ctaaaccctcaatccaaacacaccctaa 35736173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 3 - 152
Target Start/End: Original strand, 36566940 - 36567090
Alignment:
Q  3 taaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaa 102  Q
    |||||||||||||||||||||| |||||  |||||||||||||||||||||| || ||||||| ||||||||||||||| ||| | |||||||||||||     
T  36566940 taaaaagttaacatattaacatgataaatgatcatataatacttcaatcacaattaatttattatagaaaaacatgttatataattcataatttaaaaac 36567039  T
Q  103 g-aaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    | ||||||||||| || ||||  ||| |||||||||||||| ||| |||||    
T  36567040 gaaaaagtaaatcatctcctctattcccctcctaaaccctcaatccaaaca 36567090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 39821826 - 39821686
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||| ||||||||||||||||| |||||  ||| |||||||||| |||| ||||| ||||||||||||||||||||||| | | ||||||||||||||    
T  39821826 tttaaagagttaacatattaacatgataaatgatcttataatacttaaatcgcacttaatttattttagaaaaacatgttatagaatccataatttaaaa 39821727  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaaccct 141  Q
    | |||||||||| |||||||||| ||  |||| ||||||||    
T  39821726 atgaaaagtaaaccctcccctccatttccctcttaaaccct 39821686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 19566908 - 19567030
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||||||||| |||||||| || ||||||  || ||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||    
T  19566908 tttaaaaagttagcatattaaaatgataaacggtcgtataatacttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaa 19567007  T
Q  101 aagaaaagtaaatcctcccctcc 123  Q
    ||  ||| |||| ||||||||||    
T  19567008 aatgaaattaaaccctcccctcc 19567030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 28262530 - 28262641
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    ||||||||||||| ||| |||||| |||||| ||||| ||||| ||||||||||  | ||||||||||||||||||||||| |||||| |||||||||||    
T  28262530 tttaaaaagttaatataataacatgataaacgatcatgtaatatttcaatcacatgtaatttattttagaaaaacatgttatatagtcaataatttaaaa 28262629  T
Q  101 aagaaaagtaaa 112  Q
    ||||||||||||    
T  28262630 aagaaaagtaaa 28262641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 18 - 152
Target Start/End: Original strand, 8426975 - 8427109
Alignment:
Q  18 ttaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctc 117  Q
    ||||||| |||||  ||||||||||||||||||| ||||| ||||||||||||||||||||||| || |||  || |||||||| ||||||||||  |||    
T  8426975 ttaacatgataaatgatcatataatacttcaatcgcacttaatttattttagaaaaacatgttatatcgtctgtactttaaaaatgaaaagtaaactctc 8427074  T
Q  118 ccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    |||||||||  |||||||||||||| ||| |||||    
T  8427075 ccctccctttccctcctaaaccctcaatccaaaca 8427109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 9631717 - 9631603
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattt---tagaaaaacatgttacatagtccataattta 97  Q
    |||||||||||||||||||||||| |||||| || ||||||||||||| |||||||||||||||||    | |||||||||||| |||||| ||| ||||    
T  9631717 tttaaaaagttaacatattaacatgataaacgataatataatacttcattcacacttgatttatttaaaaaaaaaaacatgttatatagtcgatagttta 9631618  T
Q  98 aaaaagaaaagtaaa 112  Q
    |||||||||||||||    
T  9631617 aaaaagaaaagtaaa 9631603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 12541923 - 12541799
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttaga-aaaacatgttacatagtccataatttaaa 99  Q
    ||||||||||||||| |||||||| |||||| |||||||| |||||||||| ||||| |||||||||||| |||| || ||| ||||||| |||||||||    
T  12541923 tttaaaaagttaacacattaacatgataaacgatcatatagtacttcaatcgcacttaatttattttagaaaaaatattttatatagtccgtaatttaaa 12541824  T
Q  100 aaagaaaagtaaatcctcccctccc 124  Q
    ||||||||||| |  ||||||||||    
T  12541823 aaagaaaagtagactctcccctccc 12541799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 36046291 - 36046439
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    ||||||||||||||||||||||||  ||||  |||| |||||||||||||  ||||  |||||||||| |||| ||||||| || |||| ||||||||||    
T  36046291 tttaaaaagttaacatattaacatgttaaatgatcacataatacttcaat--cactcaatttattttataaaagcatgttatatcgtccgtaatttaaaa 36046388  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    || ||||||||| |||||||||||||| |||| ||||||||| ||| |||||    
T  36046389 aacaaaagtaaa-cctcccctcccttcccctcataaaccctcaatccaaaca 36046439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 40022529 - 40022421
Alignment:
Q  1 tttaaaaagttaacatattaacataa--taaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaa 98  Q
    |||||||||| |||||||||  |||   ||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||| ||||||||||    
T  40022529 tttaaaaagtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacatgttatatagttcataatttaa 40022430  T
Q  99 aaaagaaaa 107  Q
    |||| ||||    
T  40022429 aaaaaaaaa 40022421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 33 - 158
Target Start/End: Complemental strand, 41778898 - 41778773
Alignment:
Q  33 atcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctc 132  Q
    ||||||||||||||||||||||||| |||||||||| |||||||| ||| |  ||||||||||||||  | ||||||||| |||||||||||||  |||     
T  41778898 atcatataatacttcaatcacacttaatttattttaaaaaaacattttatactgtccataatttaaagtacaaaagtaaaccctcccctccctttccctt 41778799  T
Q  133 ctaaaccctccatcgaaacagaccct 158  Q
    |||||||||| ||| ||||| |||||    
T  41778798 ctaaaccctcaatccaaacacaccct 41778773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 138
Target Start/End: Complemental strand, 9427137 - 9427005
Alignment:
Q  6 aaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaa 105  Q
    ||||||| ||||||| ||| |||||||| ||||||||||||||||||| | | ||||| ||| ||||||||||||| |||||   |||||||||||||||    
T  9427137 aaagttagcatattagcatgataaacaaacatataatacttcaatcacgcataatttagttttgaaaaacatgttatatagttggtaatttaaaaaagaa 9427038  T
Q  106 aagtaaatcctcccctcccttctcctcctaaac 138  Q
    ||  ||| |||| ||||||||| ||||||||||    
T  9427037 aatcaaaccctctcctcccttcccctcctaaac 9427005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 16565934 - 16565854
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgtta 81  Q
    |||||||||||||||||| || || |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  16565934 tttaaaaagttaacatataaatatgataaacgatcatataatacttcaatcacacttaatttattttagaaaaacatgtta 16565854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 37739981 - 37740085
Alignment:
Q  4 aaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttag-aaaaacatgttacatagtccataatttaaaaaa 102  Q
    |||||||||| |||||||||| |||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||| ||| ||   |||||||||||    
T  37739981 aaaaagttaagatattaacatgataaacgatcatataatacttcaatcacacttaatttattttagaaaaaacatgttatataatctggaatttaaaaaa 37740080  T
Q  103 gaaaa 107  Q
    |||||    
T  37740081 gaaaa 37740085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 17379969 - 17379897
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaa 73  Q
    |||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||    
T  17379969 tttaaaaagttagcatattaacatgataaacaatcatataatactccaatcacacttaatttattttagaaaa 17379897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 152
Target Start/End: Original strand, 3094459 - 3094591
Alignment:
Q  20 aacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctccc 119  Q
    ||||| ||||| ||||||||||||||||||  ||||   ||||||||||||||||||| |||||||||   |||||||||||| |||||| | || ||||    
T  3094459 aacatgataaataatcatataatacttcaaaaacacgaaatttattttagaaaaacattttacatagtttgtaatttaaaaaataaaagtgagtcttccc 3094558  T
Q  120 ctcccttctcctcctaaaccctccatcgaaaca 152  Q
    |||||||  | |||||||||||| ||| |||||    
T  3094559 ctccctttccttcctaaaccctcaatccaaaca 3094591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 160
Target Start/End: Original strand, 31795875 - 31796010
Alignment:
Q  20 aacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctccc 119  Q
    ||||| |||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||  || ||| | ||||| ||||||||| |||      ||    
T  31795875 aacatgataaacgatcatataatacttcaatcacacttaatttattttaaaaaaacatgttatttactccgtgatttagaaaagaaaattaa-----tcc 31795969  T
Q  120 ctcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    |||||||| ||||||||||| || ||| ||||| |||||||    
T  31795970 ctcccttcccctcctaaaccttcaatccaaacaaaccctaa 31796010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 152
Target Start/End: Complemental strand, 41841814 - 41841688
Alignment:
Q  26 ataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctccct 125  Q
    ||||| |||||||||||||| ||||||| ||| ||||||||||| |||| |||||| |||||   |||||||||||||||||  ||| |||||| |||||    
T  41841814 ataaaaaatcatataatactccaatcacccttaatttattttaggaaaatatgttatatagttggtaatttaaaaaagaaaatcaaaccctcccatccct 41841715  T
Q  126 tctcctcctaaaccctccatcgaaaca 152  Q
    |  ||||||||| |||| ||| |||||    
T  41841714 ttccctcctaaatcctcaatccaaaca 41841688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 114
Target Start/End: Original strand, 6721717 - 6721822
Alignment:
Q  9 gttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaag 108  Q
    ||||| || ||||||| |||||  || |||||||| |||||||||||||||||||||||||||||||||| || ||| ||| |  ||||||||||||||     
T  6721717 gttaatatcttaacatgataaatgataatataatatttcaatcacacttgatttattttagaaaaacatgctatatattccgtggtttaaaaaagaaaac 6721816  T
Q  109 taaatc 114  Q
    ||||||    
T  6721817 taaatc 6721822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 112
Target Start/End: Original strand, 29525823 - 29525931
Alignment:
Q  6 aaagttaacatattaacataataaaca--atcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaag 103  Q
    ||||||||||||||||||| ||||| |  || ||||||||||||||||||| || |||||||||| |||||||| ||| ||| ||| | |||||||||||    
T  29525823 aaagttaacatattaacatgataaaaagtattatataatacttcaatcacatttaatttattttaaaaaaacatattatatattccgtgatttaaaaaag 29525922  T
Q  104 aaaagtaaa 112  Q
    |||| ||||    
T  29525923 aaaaataaa 29525931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 34209621 - 34209560
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgattt 62  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||    
T  34209621 tttaaaaagttaacatattaacatgataaacaatcatataacacttcaatcacacttaattt 34209560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 160
Target Start/End: Original strand, 42296409 - 42296549
Alignment:
Q  20 aacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctccc 119  Q
    |||||||||||  ||||||||||| || ||  |||||| ||| |||||| ||||| || |||||| || | |||||||||||| |||||| || |||| |    
T  42296409 aacataataaatgatcatataataatttaaaaacacttaattcattttaaaaaaatattttacatcgttcgtaatttaaaaaataaaagtgaaccctctc 42296508  T
Q  120 ctcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    |||||||| |||||||| ||||| ||| ||||| |||||||    
T  42296509 ctcccttcccctcctaatccctcaatccaaacacaccctaa 42296549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 33 - 142
Target Start/End: Complemental strand, 887041 - 886934
Alignment:
Q  33 atcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctc 132  Q
    ||||||||||||||||||||||| | |||||||||| |||| ||| ||| || ||   |||||||||||||||||||||  |||||| | ||||| ||||    
T  887041 atcatataatacttcaatcacacataatttattttaaaaaagcattttatattgtg--taatttaaaaaagaaaagtaagccctcccttaccttcccctc 886944  T
Q  133 ctaaaccctc 142  Q
    ||||||||||    
T  886943 ctaaaccctc 886934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 33 - 160
Target Start/End: Original strand, 21662328 - 21662456
Alignment:
Q  33 atcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcc--cctcccttctcc 130  Q
    |||||||||||||||||||| |||| ||| |||||| |||||||| |||||  ||| ||| ||||||| ||||||||||  |||||  |||||| || ||    
T  21662328 atcatataatacttcaatcaaacttaattgatttta-aaaaacattttacagtgtctatactttaaaagagaaaagtaaggcctcccgcctcccctcccc 21662426  T
Q  131 tcctaaaccctccatcgaaacagaccctaa 160  Q
    ||| |||||||||||| ||||| |||||||    
T  21662427 tccaaaaccctccatccaaacataccctaa 21662456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 33 - 158
Target Start/End: Complemental strand, 45257432 - 45257307
Alignment:
Q  33 atcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctc 132  Q
    |||||||||||||||||  |||||| ||||||||||  ||||||| |||||| || | ||||||| |||| |||||| | ||||||| ||| ||| ||||    
T  45257432 atcatataatacttcaaaaacacttaatttattttaagaaaacattttacattgttcgtaatttataaaataaaagtgagtcctcccttcctttcccctc 45257333  T
Q  133 ctaaaccctccatcgaaacagaccct 158  Q
    |||||| ||| ||| ||||| |||||    
T  45257332 ctaaactctcaatccaaacacaccct 45257307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 42316851 - 42316907
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacactt 57  Q
    |||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||    
T  42316851 tttaaaaagttaacgtattaacatgataaacgatcatataatacttcaatcacactt 42316907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 158
Target Start/End: Complemental strand, 31061497 - 31061359
Alignment:
Q  20 aacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctccc 119  Q
    ||||| |||||  ||||||||||| |||||  |||||| |||||||||| ||| |||| |||||| || | |||||||||||| |||||| |  ||||||    
T  31061497 aacatgataaatgatcatataatatttcaaaaacacttaatttattttaaaaacacattttacattgttcgtaatttaaaaaataaaagtgagccctccc 31061398  T
Q  120 ctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
     ||| ||| ||||||||||| || ||| ||||| |||||    
T  31061397 atcctttcccctcctaaaccttcaatccaaacacaccct 31061359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 152
Target Start/End: Complemental strand, 31795841 - 31795775
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    |||| ||||||||||| ||||||||| ||||||||||||||| |||| ||||||||||||| |||||    
T  31795841 gtccgtaatttaaaaacgaaaagtaagtcctcccctcccttcacctcataaaccctccatccaaaca 31795775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 12751968 - 12751899
Alignment:
Q  5 aaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaa 74  Q
    |||| |||| ||| ||| ||||||||| ||||||||||||||||||||||||| | ||||||||||||||    
T  12751968 aaaaattaatataataatataataaacgatcatataatacttcaatcacacttaaattattttagaaaaa 12751899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 2381109 - 2381197
Alignment:
Q  36 atataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctccc 124  Q
    ||||||||||||||  |||||| |||||||||| |||||||| |||||| || | |||||||||||| |||||| ||  ||||||||||    
T  2381109 atataatacttcaaaaacacttaatttattttaaaaaaacattttacattgttcgtaatttaaaaaataaaagtgaactctcccctccc 2381197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 158
Target Start/End: Original strand, 23748275 - 23748339
Alignment:
Q  94 tttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    |||||||| ||||||| || |||||||||||||| |||||||||||||||||| ||||| |||||    
T  23748275 tttaaaaatgaaaagtgaaccctcccctcccttcccctcctaaaccctccatccaaacacaccct 23748339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 39354264 - 39354372
Alignment:
Q  4 aaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaag 103  Q
    ||||| |||| ||| ||||||||||| | ||||| ||||||||||||||||||   ||||||||||| |||||||||| |||     ||||||||||||     
T  39354264 aaaaaattaaaataataacataataatcgatcatgtaatacttcaatcacactaactttattttagataaacatgttatataacttgtaatttaaaaaaa 39354363  T
Q  104 aaaagtaaa 112  Q
    |||||||||    
T  39354364 aaaagtaaa 39354372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 151
Target Start/End: Original strand, 1270396 - 1270515
Alignment:
Q  33 atcatataatacttcaatcacacttgatttattttagaaaaa-catgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcccttctcct 131  Q
    ||||||||| |||||||  |||||| |||||||| | ||||| ||| |||||| || | |||||||||||| |||||| |  ||||||||||||| ||||    
T  1270396 atcatataacacttcaaaaacacttaatttatttaaaaaaaaacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttgtcct 1270495  T
Q  132 cctaaaccctccatcgaaac 151  Q
    |||||| |||| ||| ||||    
T  1270496 cctaaatcctcaatccaaac 1270515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 152
Target Start/End: Original strand, 31061543 - 31061598
Alignment:
Q  97 aaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||| ||| |||||    
T  31061543 aaaaaagaaaagtaaatcctcccctccattcccctcctaaaccctcaatccaaaca 31061598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 91 - 146
Target Start/End: Original strand, 40022550 - 40022605
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatc 146  Q
    ||||||||||| |||| ||||| ||||||||||||||||||| |||||||||||||    
T  40022550 taatttaaaaatgaaatgtaaaccctcccctcccttctcctcttaaaccctccatc 40022605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 18811467 - 18811413
Alignment:
Q  19 taacataataaacaatcatataatacttcaatcacacttgatttattttagaaaa 73  Q
    |||||| |||||||||||||||||| ||||||||||||| |||||||||| ||||    
T  18811467 taacatgataaacaatcatataatatttcaatcacacttaatttattttaaaaaa 18811413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 86 - 160
Target Start/End: Original strand, 22356176 - 22356250
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    |||| ||||||||||||||||| | || |||||||||||||| ||||||||| |||| ||| ||||| |||||||    
T  22356176 gtccgtaatttaaaaaagaaaaatgaaccctcccctcccttcccctcctaaatcctcaatccaaacacaccctaa 22356250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 32503314 - 32503236
Alignment:
Q  3 taaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgtta 81  Q
    ||||||||||| |||| || || ||||| |||||||||||| || ||||| |||| |||||||||||||||| ||||||    
T  32503314 taaaaagttaatatataaagatgataaataatcatataatattttaatcatacttaatttattttagaaaaatatgtta 32503236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 92 - 158
Target Start/End: Original strand, 35736365 - 35736431
Alignment:
Q  92 aatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    |||||||||| ||||||| |  |||||||||||||| |||||||||||||||||| ||||| |||||    
T  35736365 aatttaaaaacgaaaagtgagccctcccctcccttcacctcctaaaccctccatccaaacacaccct 35736431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 136
Target Start/End: Complemental strand, 27926667 - 27926590
Alignment:
Q  59 atttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaa 136  Q
    ||||||||||||||||||||||| | | ||||  ||||||||||||||| ||||  ||| |||||||||| |||||||    
T  27926667 atttattttagaaaaacatgttatacaatccagtatttaaaaaagaaaaataaacgctcacctcccttcttctcctaa 27926590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 142
Target Start/End: Complemental strand, 33265731 - 33265623
Alignment:
Q  33 atcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctc 132  Q
    |||||||||||||||||  |||||| |||||||||| |||||  | |||||| || | |||||||||||| |||| | | || || ||||||||| ||||    
T  33265731 atcatataatacttcaaaaacacttaatttatttta-aaaaatgttttacattgttcgtaatttaaaaaataaaaatgagtcatcgcctcccttcccctc 33265633  T
Q  133 ctaaaccctc 142  Q
    ||||||||||    
T  33265632 ctaaaccctc 33265623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 160
Target Start/End: Original strand, 45257484 - 45257553
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    |||||||||||||||||||||| | || ||||||||| | ||||||| |||||||| ||||| |||||||    
T  45257484 taatttaaaaaagaaaagtaaaccatctcctcccttcccatcctaaaacctccatccaaacacaccctaa 45257553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 1052815 - 1052771
Alignment:
Q  97 aaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccct 141  Q
    |||||||||||||||||| |||||||| |||||||||||||||||    
T  1052815 aaaaaagaaaagtaaatcttcccctccattctcctcctaaaccct 1052771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 107
Target Start/End: Complemental strand, 7681378 - 7681299
Alignment:
Q  28 aaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaa 107  Q
    |||| ||||||||||||||||||||||||| |||||||||| |||||  | ||| ||| ||| ||||| ||||| |||||    
T  7681378 aaacgatcatataatacttcaatcacacttaatttattttacaaaaaactattatataatccgtaattaaaaaatgaaaa 7681299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 111
Target Start/End: Original strand, 9591973 - 9592032
Alignment:
Q  52 acacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaa 111  Q
    |||||| || |||||||||||||||||||| ||||| | |||||||||||| ||||||||    
T  9591973 acacttaatatattttagaaaaacatgttatatagtgcgtaatttaaaaaaaaaaagtaa 9592032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 142
Target Start/End: Original strand, 17333933 - 17334040
Alignment:
Q  36 atataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaag-aaaagtaaatcctcccctcccttctcctcct 134  Q
    ||||||||||||||  |||||| |||||||||| ||| |||| |||||| ||   ||| ||||||||  |||||| | ||||||||| ||||| ||||||    
T  17333933 atataatacttcaaaaacacttaatttattttaaaaagacattttacattgtttgtaacttaaaaaaataaaagtgagtcctccccttccttcccctcct 17334032  T
Q  135 aaaccctc 142  Q
    ||||||||    
T  17334033 aaaccctc 17334040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 122
Target Start/End: Complemental strand, 22356087 - 22356001
Alignment:
Q  36 atataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctc 122  Q
    ||||||||||||||  |||||| || ||||||| |||||||| |||||| || | |||||||||||| |||| | |||| |||||||    
T  22356087 atataatacttcaaaaacacttaatctattttaaaaaaacattttacattgttcgtaatttaaaaaataaaaatgaatcatcccctc 22356001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 158
Target Start/End: Complemental strand, 34187697 - 34187575
Alignment:
Q  36 atataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctccta 135  Q
    ||||||||||||||  |||||| ||||||||||  ||||||| |||| | || | |||||||||||  |||||| || | |||||| |||||  ||||||    
T  34187697 atataatacttcaaaaacacttaatttattttaataaaacatcttacgttgttcgtaatttaaaaattaaaagtgaaccttccccttccttccactccta 34187598  T
Q  136 aaccctccatcgaaacagaccct 158  Q
    ||| ||| ||| ||||| |||||    
T  34187597 aactctcaatccaaacacaccct 34187575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 27926709 - 27926668
Alignment:
Q  2 ttaaaaagttaacatattaacataataaacaatcatataata 43  Q
    ||||||||||||||||||||||| |||||| |||||||||||    
T  27926709 ttaaaaagttaacatattaacatgataaacgatcatataata 27926668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 887254 - 887210
Alignment:
Q  20 aacataataaacaatcatataatacttcaatcacacttgatttat 64  Q
    ||||| |||||| ||||||||||||||||||||||| ||||||||    
T  887254 aacatgataaacgatcatataatacttcaatcacacatgatttat 887210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 887287 - 887335
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaacc 139  Q
    |||||||||||||||||||||   ||||||||||||| |||||||||||    
T  887287 taatttaaaaaagaaaagtaagcgctcccctcccttcccctcctaaacc 887335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 158
Target Start/End: Original strand, 9631732 - 9631804
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    |||| ||||||||||| ||||||| || ||||  |||||||  |||||||||||||||||| ||||| |||||    
T  9631732 gtccgtaatttaaaaacgaaaagttaaccctcttctccctttccctcctaaaccctccatccaaacacaccct 9631804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 145
Target Start/End: Complemental strand, 8426951 - 8426892
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccat 145  Q
    |||| |||||||||||  ||||||||| |||||| ||||||| |||||||||| ||||||    
T  8426951 gtccttaatttaaaaattaaaagtaaaccctcccttcccttcccctcctaaactctccat 8426892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 142
Target Start/End: Complemental strand, 17331478 - 17331431
Alignment:
Q  95 ttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctc 142  Q
    |||||||||||||||||| |||||||||| ||| |||||| |||||||    
T  17331478 ttaaaaaagaaaagtaaaccctcccctcctttcccctccttaaccctc 17331431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 17379890 - 17379843
Alignment:
Q  114 cctcccctcccttctcctcctaaaccctccatcgaaacagaccctaag 161  Q
    |||||||||||||| |||||||||||||| ||| ||||| ||||||||    
T  17379890 cctcccctcccttcccctcctaaaccctcaatccaaacacaccctaag 17379843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 157
Target Start/End: Complemental strand, 36046276 - 36046205
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccc 157  Q
    |||| ||||||||||| ||||| ||||  ||||||||  ||| |||||||||||||||||| ||||| ||||    
T  36046276 gtccgtaatttaaaaatgaaaaataaactctcccctcatttcccctcctaaaccctccatccaaacacaccc 36046205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 91 - 158
Target Start/End: Original strand, 42813797 - 42813864
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    ||||||||||||||||| |||  | ||||||| |||| ||||||||||||| |||| ||||| |||||    
T  42813797 taatttaaaaaagaaaaataagccatcccctctcttcccctcctaaacccttcatccaaacacaccct 42813864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 12541951 - 12541999
Alignment:
Q  103 gaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    |||||||||||| | ||||||||||| ||||||||||||||||| |||||    
T  12541951 gaaaagtaaatc-taccctcccttcttctcctaaaccctccatccaaaca 12541999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 20545848 - 20545799
Alignment:
Q  19 taacataataaacaatcatataatacttcaatcacacttgatttatttta 68  Q
    |||||| | ||| ||||||||||||||||||||||| || ||||||||||    
T  20545848 taacatgagaaataatcatataatacttcaatcacatttaatttatttta 20545799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 161
Target Start/End: Complemental strand, 2381057 - 2380989
Alignment:
Q  94 tttaaaaaagaaaagtaaatcctcccctccc-ttctcctcctaaaccctccatcgaaacagaccctaag 161  Q
    |||||||||||||| | | |||||||||||| ||| |||||||||||||| ||| ||||| | ||||||    
T  2381057 tttaaaaaagaaaaatgagtcctcccctccccttcccctcctaaaccctctatccaaacacatcctaag 2380989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 158
Target Start/End: Original strand, 17380013 - 17380085
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    |||| ||||||||||| |||||  ||| | ||||||| |||| |||||||||||||| ||| ||||| |||||    
T  17380013 gtccgtaatttaaaaatgaaaatcaaaccatcccctcacttcccctcctaaaccctcaatccaaacacaccct 17380085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 134
Target Start/End: Complemental strand, 36566922 - 36566874
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcct 134  Q
    |||| ||||||||||| ||||||||||||||| | ||||||| ||||||    
T  36566922 gtccgtaatttaaaaatgaaaagtaaatcctctcatcccttcccctcct 36566874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 42296370 - 42296322
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaacc 139  Q
    ||||||||||||||||||||| |||| | |||||||| |||| ||||||    
T  42296370 taatttaaaaaagaaaagtaagtccttcactcccttcccctcataaacc 42296322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 45098307 - 45098243
Alignment:
Q  20 aacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacat 84  Q
    ||||| |||||  |||||||||||||||||  |||||| |||||||||| ||| |||| ||||||    
T  45098307 aacatgataaatgatcatataatacttcaaaaacacttaatttattttaaaaatacattttacat 45098243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 104; Significance: 8e-52; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 33655195 - 33655346
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||||||||||||||||||||| |||||  ||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||    
T  33655195 tttaaaaagttaacatattaacatgataaatgatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatagcccataatttaaaa 33655294  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    |||||||||||| |||| |||| |||| |||||||||||||| ||| |||||    
T  33655295 aagaaaagtaaaccctcgcctctcttcccctcctaaaccctcaatccaaaca 33655346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 4 - 161
Target Start/End: Original strand, 34228408 - 34228566
Alignment:
Q  4 aaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatag-tccataatttaaaaaa 102  Q
    |||||||||||||||||| || |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||| |||||| ||||     
T  34228408 aaaaagttaacatattaatatgataagcaatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatagttccgtaattttaaaat 34228507  T
Q  103 gaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaag 161  Q
    ||||||||||||||||||||||||||||||||||||| || ||  ||||| ||||||||    
T  34228508 gaaaagtaaatcctcccctcccttctcctcctaaaccttcaattcaaacacaccctaag 34228566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 1051586 - 1051742
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||| |||||||||||||||||| |||| ||||| | ||||||||||    
T  1051586 tttaaaaagttaacatatta-catgataaacaatcatataatgcttcaatcacacttaatttattttagaaaaacaggttatatagttcgtaatttaaaa 1051684  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    ||||||| ||||||||| ||||||||| |||||||||||||| ||| ||||| |||||    
T  1051685 aagaaaaataaatcctctcctcccttcccctcctaaaccctcaatccaaacacaccct 1051742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 47391013 - 47390853
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaa-tcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaa 99  Q
    ||||||| |||||||||||||||| |||||||| ||||||||||||||||||||| || || |||||||||||||||||||| ||||| |||||||||||    
T  47391013 tttaaaatgttaacatattaacatgataaacaagtcatataatacttcaatcacaattaatgtattttagaaaaacatgttatatagttcataatttaaa 47390914  T
Q  100 aaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    ||||||||||||| ||||| |||||||| |||||||| ||||| ||| ||||| |||||||    
T  47390913 aaagaaaagtaaaccctccactcccttcccctcctaacccctcaatccaaacacaccctaa 47390853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 5 - 160
Target Start/End: Complemental strand, 25887345 - 25887190
Alignment:
Q  5 aaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaaga 104  Q
    ||||||||||||||||| || |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||| | ||||| ||||||    
T  25887345 aaaagttaacatattaatatgataaacaatcatataatactccaatcacacttaatttattttagaaaaacatgttatatagtccgtgatttataaaaga 25887246  T
Q  105 aaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    |||  |||||||||||||||||| |||| ||||||||| ||| ||||| |||||||    
T  25887245 aaaacaaatcctcccctcccttcccctcataaaccctcaatccaaacacaccctaa 25887190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 41497044 - 41497170
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||||| ||||||||||||||| |||||  |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||    
T  41497044 tttaaaaatttaacatattaacatgataaatgatcatataattcttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaa 41497143  T
Q  101 aagaaaagtaaatcctcccctcccttc 127  Q
    |||||||||||| ||||||||||||||    
T  41497144 aagaaaagtaaaccctcccctcccttc 41497170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 3 - 158
Target Start/End: Original strand, 13771035 - 13771190
Alignment:
Q  3 taaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaa 102  Q
    |||||||||||||||||||||| ||||||||| |||||| |||  |||||||||| |||||||||| |||||||||||| ||||||| |||||||||||     
T  13771035 taaaaagttaacatattaacatgataaacaatgatataacactcgaatcacacttaatttattttaaaaaaacatgttatatagtccgtaatttaaaaac 13771134  T
Q  103 gaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    ||||||||||  ||| ||||||||| |||||||||||||| ||| ||||| |||||    
T  13771135 gaaaagtaaactctcacctcccttcccctcctaaaccctcaatctaaacacaccct 13771190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 33 - 158
Target Start/End: Original strand, 39855984 - 39856109
Alignment:
Q  33 atcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctc 132  Q
    |||||||||||||| | |||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||| ||||    
T  39855984 atcatataatacttaagtcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaaccctcccctcccttcccctc 39856083  T
Q  133 ctaaaccctccatcgaaacagaccct 158  Q
    |||||||||| ||| ||||| |||||    
T  39856084 ctaaaccctcaatccaaacacaccct 39856109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 24970252 - 24970358
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||||||||||||||||||| | |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||    
T  24970252 tttaaaaagttaacatattaacttgataaacgatcatataatacttcaatcacacttaatttattttagaaaaacatgttatataatccataatttaaaa 24970351  T
Q  101 aagaaaa 107  Q
    |||||||    
T  24970352 aagaaaa 24970358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 124
Target Start/End: Original strand, 40196621 - 40196741
Alignment:
Q  3 taaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaa 102  Q
    |||||||||||||||| ||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||| |||||||||||     
T  40196621 taaaaagttaacatatcaacctgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatattccgtaatttaaaaac 40196720  T
Q  103 gaaaagtaaatcctcccctccc 124  Q
     ||||||||| |||||||||||    
T  40196721 aaaaagtaaa-cctcccctccc 40196741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 152
Target Start/End: Complemental strand, 41008334 - 41008188
Alignment:
Q  5 aaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaa-catgttacatagtccataatttaaaaaag 103  Q
    |||||||||||||||||||| ||||||||||||||||  |||||||||||||| |||||||||| ||||| ||||||| ||||||| |||||||||||||    
T  41008334 aaaagttaacatattaacatgataaacaatcatataa--cttcaatcacacttaatttattttaaaaaaaacatgttatatagtccgtaatttaaaaaag 41008237  T
Q  104 aaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    ||||  |||| ||||||||||||| ||||  |||||||| ||| |||||    
T  41008236 aaaaacaaattctcccctcccttcccctctcaaaccctcaatccaaaca 41008188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 43230389 - 43230268
Alignment:
Q  5 aaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaaga 104  Q
    |||||||||||||||||||| |||||| ||| |||||| |||||||| ||||| ||||||||||||||||||||||| ||| ||| ||||||||||||||    
T  43230389 aaaagttaacatattaacatgataaacgatcgtataattcttcaatcgcacttaatttattttagaaaaacatgttatataatccgtaatttaaaaaaga 43230290  T
Q  105 aaagtaaatcctcccctccctt 126  Q
    |||||||| |||||||| ||||    
T  43230289 aaagtaaaccctccccttcctt 43230268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 34235096 - 34235206
Alignment:
Q  3 taaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttag-aaaaacatgttacatagtccataatttaaaaa 101  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||| ||| |||||||||||    
T  34235096 taaaaagttaacatattaatatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaaacatgttatataatccgtaatttaaaaa 34235195  T
Q  102 agaaaagtaaa 112  Q
     ||||||||||    
T  34235196 tgaaaagtaaa 34235206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 15 - 157
Target Start/End: Original strand, 31571569 - 31571713
Alignment:
Q  15 atattaacataataaacaatcatataatacttcaatcacacttgat-ttattttagaaaaa-catgttacatagtccataatttaaaaaagaaaagtaaa 112  Q
    |||||||||| ||||||||| |||||||||||||||||||||| || || ||||| ||||| ||||||| || |||| ||||||||||||||||||||||    
T  31571569 atattaacatgataaacaattatataatacttcaatcacacttaatatttttttaaaaaaagcatgttatatggtccgtaatttaaaaaagaaaagtaaa 31571668  T
Q  113 tcctcccctcccttctcctcctaaaccctccatcgaaacagaccc 157  Q
      |||||||| |||| |||||||||||||| ||| ||||| ||||    
T  31571669 ctctcccctcgcttcccctcctaaaccctcaatccaaacacaccc 31571713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 3 - 123
Target Start/End: Original strand, 37417722 - 37417842
Alignment:
Q  3 taaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaa 102  Q
    ||||||||||||||||| |||| |||||| ||||||||||||||||||||||||| | ||| ||| ||||||||||||| ||||||| | |||||||||     
T  37417722 taaaaagttaacatattcacatgataaacgatcatataatacttcaatcacacttaacttaattttgaaaaacatgttatatagtccgttatttaaaaat 37417821  T
Q  103 gaaaagtaaatcctcccctcc 123  Q
    |||||||||| | ||||||||    
T  37417822 gaaaagtaaaccatcccctcc 37417842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 17853028 - 17852906
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    ||||||||| ||| |||  ||||| |||||| |||||||||||| |||||||||||| |||||||||||||||||||||||  || ||| ||||||||||    
T  17853028 tttaaaaagataaaataacaacatgataaacgatcatataatacctcaatcacacttaatttattttagaaaaacatgttatttaatccgtaatttaaaa 17852929  T
Q  101 aagaaaagtaaatcctcccctcc 123  Q
    |||||||||||  ||||||||||    
T  17852928 aagaaaagtaatccctcccctcc 17852906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 152
Target Start/End: Complemental strand, 26365916 - 26365773
Alignment:
Q  10 ttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagt 109  Q
    |||| ||| |||||| | |||||||||||||||||||||||||||| |  ||||||||||||||| |||||| |||||   |||| ||||||||||||||    
T  26365916 ttaaaataataacatgagaaacaatcatataatacttcaatcacacctagtttattttagaaaaatatgttatatagtttgtaatataaaaaagaaaagt 26365817  T
Q  110 aaatcctcccctccctt-ctcctcctaaaccctccatcgaaaca 152  Q
    |||  |||  ||||||| | |||||||||||||| ||| |||||    
T  26365816 aaactctcaactcccttccccctcctaaaccctcaatccaaaca 26365773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 22163206 - 22163272
Alignment:
Q  11 taacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacat 77  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  22163206 taacatattaacatgataaacgatcatataatacttcaatcacacttaatttattttagaaaaacat 22163272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 22221914 - 22221980
Alignment:
Q  11 taacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacat 77  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  22221914 taacatattaacatgataaacgatcatataatacttcaatcacacttaatttattttagaaaaacat 22221980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 152
Target Start/End: Original strand, 23029429 - 23029567
Alignment:
Q  3 taaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaa 102  Q
    ||||| |||||||||||||||| ||||||| | |||||||| ||||||  |      |||||||||||||||||||||| |||||| |||||||||||||    
T  23029429 taaaatgttaacatattaacatgataaacagttatataatatttcaatacc------tttattttagaaaaacatgttatatagtctataatttaaaaaa 23029522  T
Q  103 gaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    ||||||||||     ||||| |||| ||||||||||| || |||||||||    
T  23029523 gaaaagtaaa-----ccctctcttcacctcctaaaccttcaatcgaaaca 23029567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 158
Target Start/End: Complemental strand, 37925963 - 37925841
Alignment:
Q  36 atataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctccta 135  Q
    ||||||||||||||  |||||| || ||||| | |||||||| |||||| || | |||||||||||| |||||| || |||||||||||||| |||||||    
T  37925963 atataatacttcaaaaacacttaatctatttaaaaaaaacattttacattgttcgtaatttaaaaaataaaagtgaaccctcccctcccttcccctccta 37925864  T
Q  136 aaccctccatcgaaacagaccct 158  Q
    ||||||| ||| ||||| |||||    
T  37925863 aaccctcaatccaaacacaccct 37925841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 152
Target Start/End: Complemental strand, 33519186 - 33519054
Alignment:
Q  20 aacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctccc 119  Q
    ||||| |||||  |||||||||||||||||  |||||| |||||||| | |||||||| ||| || || | |||||||||||| |||||| |  ||||||    
T  33519186 aacatgataaatgatcatataatacttcaaaaacacttaatttatttcaaaaaaacattttatattgttcgtaatttaaaaaataaaagtgagccctccc 33519087  T
Q  120 ctcccttctcctcctaaaccctccatcgaaaca 152  Q
    |||||||| ||||||||| |||||||| |||||    
T  33519086 ctcccttcccctcctaaaacctccatccaaaca 33519054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 107
Target Start/End: Original strand, 40572325 - 40572427
Alignment:
Q  5 aaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaaga 104  Q
    |||||||||||||||||||| |||||   ||||||||||||| |||||| ||| |||||||||||| |||||| ||| ||||||| |||||| ||||| |    
T  40572325 aaaagttaacatattaacatgataaaaggtcatataatactttaatcacgcttaatttattttagagaaacatattatatagtccgtaattttaaaaata 40572424  T
Q  105 aaa 107  Q
    |||    
T  40572425 aaa 40572427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 42306487 - 42306385
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||||||||| ||||||||| | |||||||    ||||||||| ||||||| ||| |||||||||||||| |||||||| ||||||  ||||||||||    
T  42306487 tttaaaaagttagcatattaacctcataaaca----tataatactccaatcacgcttaatttattttagaaatacatgttatatagtcggtaatttaaaa 42306392  T
Q  101 aagaaaa 107  Q
    |||||||    
T  42306391 aagaaaa 42306385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 38378183 - 38378095
Alignment:
Q  20 aacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaag 108  Q
    |||||||||||| |||||||||||| ||||| ||| ||||||||||||  |||||||||||| ||||| | || |||||||||||||||    
T  38378183 aacataataaacgatcatataatacctcaattacaattgatttatttttaaaaaacatgttatatagttcgtagtttaaaaaagaaaag 38378095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 36 - 160
Target Start/End: Complemental strand, 39646591 - 39646467
Alignment:
Q  36 atataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctccta 135  Q
    ||||||||||||||  ||| || |||||||||| ||| | || |||||| || |||||||||||||| |||||| | |||||||||||||||  ||||||    
T  39646591 atataatacttcaaaaacagttaatttattttaaaaatatattttacattgttcataatttaaaaaataaaagtgattcctcccctcccttcctctccta 39646492  T
Q  136 aaccctccatcgaaacagaccctaa 160  Q
    |||| || ||| ||||| |||||||    
T  39646491 aaccgtcaatccaaacacaccctaa 39646467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 158
Target Start/End: Complemental strand, 4833598 - 4833531
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    ||||||||||| |||||||||| |||||||||||||| |||||||||||||||||| ||||| |||||    
T  4833598 taatttaaaaatgaaaagtaaaccctcccctcccttcccctcctaaaccctccatccaaacataccct 4833531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 4833620 - 4833703
Alignment:
Q  3 taaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatag 86  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||||||| || |||||||||| ||  |||||||| ||||    
T  4833620 taaaaagttaacctattaacatgataaacaatcatataatacttaaatcacatttaatttattttaaaattacatgttatatag 4833703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 52 - 123
Target Start/End: Complemental strand, 10315719 - 10315648
Alignment:
Q  52 acacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcc 123  Q
    ||||| ||||||||||||||||| |||||| ||||||   ||||||||||||||||||||||||||||||||    
T  10315719 acactggatttattttagaaaaatatgttatatagtctgaaatttaaaaaagaaaagtaaatcctcccctcc 10315648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 158
Target Start/End: Original strand, 18231763 - 18231830
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||| ||||| |||||    
T  18231763 taatttaaaaatgaaaagtaaatcctcccctcccttcccctcctaaacgctccatccaaacacaccct 18231830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 161
Target Start/End: Complemental strand, 41497029 - 41496954
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaag 161  Q
    |||| |||||||||||  ||||||||||| |||||||||||| |||||||||||||||||| ||||| ||||||||    
T  41497029 gtccgtaatttaaaaataaaaagtaaatcatcccctcccttcccctcctaaaccctccatccaaacacaccctaag 41496954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 91 - 161
Target Start/End: Original strand, 33519225 - 33519295
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaag 161  Q
    ||||||||| |||||||||||  |||||||||||||| |||||||||||||||||| ||||| ||||||||    
T  33519225 taatttaaagaagaaaagtaatccctcccctcccttcccctcctaaaccctccatccaaacacaccctaag 33519295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 91 - 161
Target Start/End: Complemental strand, 36267620 - 36267550
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaag 161  Q
    ||||||||||||||||| |||  |||||||||||||| |||||||||||||||||| ||||| ||||||||    
T  36267620 taatttaaaaaagaaaactaagccctcccctcccttcccctcctaaaccctccatccaaacacaccctaag 36267550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 86 - 160
Target Start/End: Complemental strand, 48881630 - 48881556
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    |||| |||||||||||||||||||||  | |||||||||||| |||||||||||||||||| ||||| |||||||    
T  48881630 gtccgtaatttaaaaaagaaaagtaagccatcccctcccttcccctcctaaaccctccatccaaacacaccctaa 48881556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 152
Target Start/End: Complemental strand, 35422102 - 35421970
Alignment:
Q  20 aacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctccc 119  Q
    ||||||||||| |||||||| |||||||||  |||||| |||||||||| |||||||| |||||| ||   |||||||||||| |||| ||| || ||      
T  35422102 aacataataaataatcatatgatacttcaaaaacacttaatttattttaaaaaaacattttacattgtttgtaatttaaaaaataaaaataagtcatctt 35422003  T
Q  120 ctcccttctcctcctaaaccctccatcgaaaca 152  Q
    |||||||| |||| |||| |||| ||| |||||    
T  35422002 ctcccttcacctcttaaatcctcaatccaaaca 35421970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 10315790 - 10315719
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaa 72  Q
    |||||||| ||||||||||||||  |||||| || ||||||||||||||||||||| | |||||||||||||    
T  10315790 tttaaaaatttaacatattaacaagataaacgattatataatacttcaatcacactgggtttattttagaaa 10315719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 13425211 - 13425273
Alignment:
Q  5 aaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttatttt 67  Q
    |||||| ||||||||||||| |||||||||||||| |||||||| |||||||| |||||||||    
T  13425211 aaaagtcaacatattaacatgataaacaatcatattatacttcattcacacttaatttatttt 13425273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 18231743 - 18231693
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatc 51  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  18231743 tttaaaaagttaacatattaacatgataaacgatcatataatacttcaatc 18231693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 127
Target Start/End: Original strand, 18063667 - 18063772
Alignment:
Q  20 aacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaa--agtaaatcctc 117  Q
    ||||| |||||  ||||||||||||||||||||||||| |||||||||| |||||    ||| ||  ||||||||||||||||||||  ||||| |||||    
T  18063667 aacatgataaatgatcatataatacttcaatcacacttaatttattttaaaaaaa----ttatattatccataatttaaaaaagaaaagagtaattcctc 18063762  T
Q  118 ccctcccttc 127  Q
    | ||||||||    
T  18063763 cactcccttc 18063772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 161
Target Start/End: Complemental strand, 37620896 - 37620771
Alignment:
Q  36 atataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctccta 135  Q
    ||||||||||||||  ||| || |||||||||| |||| ||| |||||| || |||||||| ||||  |||||| ||  ||||||||||||| ||||| |    
T  37620896 atataatacttcaaaaacatttaatttattttaaaaaatcattttacattgttcataatttgaaaataaaaagtgaactctcccctcccttcccctccca 37620797  T
Q  136 aaccctccatcgaaacagaccctaag 161  Q
    ||||||| ||| ||||| ||| ||||    
T  37620796 aaccctcaatccaaacacaccttaag 37620771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 45940757 - 45940830
Alignment:
Q  15 atattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtc 88  Q
    ||||||||||||||| | || ||||||||||||||| ||| || |||||||||||||||| |||||| ||||||    
T  45940757 atattaacataataagcgataatataatacttcaattacatttaatttattttagaaaaatatgttatatagtc 45940830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 112
Target Start/End: Complemental strand, 48152127 - 48152030
Alignment:
Q  10 ttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagt 109  Q
    |||| ||| ||||||||||||  ||||| ||||||||||||||||||  ||||||||||||||||||||||| |    || |||||||||||||||| ||    
T  48152127 ttaaaatactaacataataaatgatcat-taatacttcaatcacactaaatttattttagaaaaacatgttata----ccgtaatttaaaaaagaaaggt 48152033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 32872868 - 32872939
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaa 72  Q
    |||||||||||||||||||||||| ||||||| |||||| ||  |||||| | |||| ||||||||||||||    
T  32872868 tttaaaaagttaacatattaacatgataaacactcatatcatctttcaattaaacttaatttattttagaaa 32872939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 42087152 - 42087041
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||||||||| ||||||||| | | |||| || |||||||| |||||| |||||| |||||||||| || || |||||| ||| | | |||||| |||    
T  42087152 tttaaaaagttagcatattaacgtgacaaacgattatataataattcaattacacttaatttattttaaaataatatgttatataattcgtaattttaaa 42087053  T
Q  101 aagaaaagtaaa 112  Q
    ||||||| ||||    
T  42087052 aagaaaaataaa 42087041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 86 - 160
Target Start/End: Complemental strand, 13771020 - 13770946
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    |||| |||||||||||  | |||||||||||||||||||||| ||||||||| |||| ||| ||||| |||||||    
T  13771020 gtccgtaatttaaaaataataagtaaatcctcccctcccttcccctcctaaatcctcaatccaaacacaccctaa 13770946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 86 - 152
Target Start/End: Original strand, 37620946 - 37621012
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    ||||||||||||||||||||||| ||| |||||||||||||| | ||  |||||||||||| |||||    
T  37620946 gtccataatttaaaaaagaaaagcaaaccctcccctcccttcccttctcaaaccctccatccaaaca 37621012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 86 - 160
Target Start/End: Complemental strand, 40196604 - 40196530
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    |||| ||||| ||||| |||||||||| ||||| |||||||| ||||| |||||||||||| ||||| |||||||    
T  40196604 gtccgtaattcaaaaatgaaaagtaaaccctcctctcccttcccctcccaaaccctccatccaaacacaccctaa 40196530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 158
Target Start/End: Original strand, 36267672 - 36267797
Alignment:
Q  33 atcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctc 132  Q
    |||||||||||||||||  ||||||  | ||||||  |||||||| |||||| |    |||||||||||| |||| | |  |||||||||||||| ||||    
T  36267672 atcatataatacttcaaaaacacttactatattttgaaaaaacattttacattggttgtaatttaaaaaataaaaatgagccctcccctcccttcccctc 36267771  T
Q  133 ctaaaccctccatcgaaacagaccct 158  Q
    |||||||||| ||| ||||| |||||    
T  36267772 ctaaaccctcaatccaaacacaccct 36267797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 40282263 - 40282194
Alignment:
Q  92 aatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaag 161  Q
    ||||||||||||||||  ||| ||||| |||||||| |||||||||||||| ||| ||||| ||||||||    
T  40282263 aatttaaaaaagaaaatcaaaccctcctctcccttcccctcctaaaccctcaatccaaacataccctaag 40282194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 86 - 158
Target Start/End: Complemental strand, 28074175 - 28074103
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    |||| ||||||||||||||||||| | | ||||||||||||| ||||||||||| || ||| ||||| |||||    
T  28074175 gtccgtaatttaaaaaagaaaagtgagttctcccctcccttcccctcctaaaccttcaatccaaacacaccct 28074103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 18795701 - 18795788
Alignment:
Q  20 aacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaa 107  Q
    |||||||||||  ||| || |||| |||||| ||||||||||| ||||| |||||||| ||| || || | |||||||||||||||||    
T  18795701 aacataataaatgatcgtacaataattcaataacacttgatttgttttaaaaaaacattttatattgttcgtaatttaaaaaagaaaa 18795788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 103
Target Start/End: Original strand, 3215979 - 3216049
Alignment:
Q  33 atcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaag 103  Q
    ||||||||||||||||   | ||||||||||||||  |||||||| |||||| || |||||||||||||||    
T  3215979 atcatataatacttcataaatacttgatttattttgaaaaaacattttacattgttcataatttaaaaaag 3216049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 137
Target Start/End: Complemental strand, 8122263 - 8122165
Alignment:
Q  39 taatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaa 137  Q
    |||||||||||  ||| || |||||||||| || || || ||| || || | |||||||||||| |||||| | || ||||||||||||||||||||||    
T  8122263 taatacttcaaaaacaattaatttattttaaaacaatattttatatggttcgtaatttaaaaaataaaagtgagtcttcccctcccttctcctcctaaa 8122165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 142
Target Start/End: Original strand, 47229998 - 47230047
Alignment:
Q  95 ttaaaaaagaaa--agtaaatcctcccctcccttctcctcctaaaccctc 142  Q
    ||||||||||||  |||||||||||||||||||| |||||||||||||||    
T  47229998 ttaaaaaagaaagaagtaaatcctcccctcccttttcctcctaaaccctc 47230047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 47229920 - 47229973
Alignment:
Q  2 ttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacac 55  Q
    ||||||||  ||||||||||||| |||||||||||| ||||| |||||||||||    
T  47229920 ttaaaaagcgaacatattaacatgataaacaatcatgtaataattcaatcacac 47229973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 48013608 - 48013520
Alignment:
Q  52 acacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccct 141  Q
    |||||| |||||||||| |||||||| |||||| || | ||||||| |||| |||||  ||  ||||||||||||| |||||||||||||    
T  48013608 acacttaatttattttaaaaaaacattttacattgttcgtaattta-aaaataaaagcgaacgctcccctcccttcccctcctaaaccct 48013520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 158
Target Start/End: Original strand, 47391028 - 47391100
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    |||| ||||||||||| |||||  |||  ||||||||||||| |||| ||||||||||||| ||||| |||||    
T  47391028 gtccgtaatttaaaaatgaaaaccaaactctcccctcccttcccctcttaaaccctccatccaaacacaccct 47391100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 123
Target Start/End: Original strand, 48094070 - 48094102
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcc 123  Q
    |||||||||||||||||||||||||||||||||    
T  48094070 taatttaaaaaagaaaagtaaatcctcccctcc 48094102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 20393740 - 20393693
Alignment:
Q  19 taacataataaacaatcatataatacttcaatcacacttgatttattt 66  Q
    |||||| |||||  ||||||||||||||||||||||||| ||||||||    
T  20393740 taacattataaatgatcatataatacttcaatcacacttaatttattt 20393693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 91 - 146
Target Start/End: Complemental strand, 30592320 - 30592265
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatc 146  Q
    |||||||||||||||||||||  |||||| ||||||  ||||||||| ||||||||    
T  30592320 taatttaaaaaagaaaagtaagccctcccttccctttccctcctaaatcctccatc 30592265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 30891096 - 30891147
Alignment:
Q  15 atattaacataataaacaatcatataatacttcaatcacacttgatttattt 66  Q
    ||||||| ||||||||| || ||||||||||||||||||| || ||||||||    
T  30891096 atattaatataataaacgataatataatacttcaatcacatttaatttattt 30891147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 3143605 - 3143531
Alignment:
Q  33 atcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaa 107  Q
    |||||||||||||||||  | |||| |||||||||| ||||| || |||||| ||  ||||||||||||| ||||    
T  3143605 atcatataatacttcaaaaaaacttaatttattttataaaaatattttacattgtttataatttaaaaaaaaaaa 3143531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 141
Target Start/End: Original strand, 25887370 - 25887420
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccct 141  Q
    ||||||||||| |||| |||||  ||||||||||||| |||||||||||||    
T  25887370 taatttaaaaatgaaatgtaaactctcccctcccttcccctcctaaaccct 25887420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 111
Target Start/End: Complemental strand, 37561919 - 37561869
Alignment:
Q  61 ttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaa 111  Q
    |||||||| |||||||| ||||||  || ||||||||||||||||||||||    
T  37561919 ttattttaaaaaaacattttacattatctataatttaaaaaagaaaagtaa 37561869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 160
Target Start/End: Original strand, 16833875 - 16833944
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    |||||| |||||||||||||| ||||| ||| ||||| |||| |||| ||| |||| ||||| |||||||    
T  16833875 taattttaaaaagaaaagtaactcctctccttccttcccctcttaaatcctgcatccaaacacaccctaa 16833944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 1e-50; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 31348408 - 31348565
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    ||||||||| |||||||||||||| |||||||||||||||||| ||||||||||| | ||||||||||||||||||||||| ||||||| | ||||||||    
T  31348408 tttaaaaagctaacatattaacatgataaacaatcatataataattcaatcacacataatttattttagaaaaacatgttatatagtccgttatttaaaa 31348507  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    |||||||||||| |||||||||||||| |||||||||| ||| ||| ||||| |||||    
T  31348508 aagaaaagtaaaccctcccctcccttcccctcctaaactctcaatccaaacacaccct 31348565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 45742047 - 45741888
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||| || |||||||||||||||||| |||| ||||||| ||||||||||    
T  45742047 tttaaaaagttaacatattaacatgataaacgatcatataatacttcaatcacatttaatttattttagaaaaacaagttatatagtccgtaatttaaaa 45741948  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    || |||||||||||||| | | | ||| |||||||||||||| ||| ||||| |||||||    
T  45741947 aacaaaagtaaatcctcacattcattcccctcctaaaccctcaatccaaacacaccctaa 45741888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 5 - 158
Target Start/End: Original strand, 1968450 - 1968603
Alignment:
Q  5 aaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaaga 104  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||| ||||||||||| ||    
T  1968450 aaaagttaacatattaacatgataaacgatcatataatacttcaatcacacctgatttattttagaaaaacatattatatagtccgtaatttaaaaatga 1968549  T
Q  105 aaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    ||| ||||  || |||||||||| |||||||||||||| ||| ||||| |||||    
T  1968550 aaattaaactcttccctcccttcccctcctaaaccctcaatccaaacacaccct 1968603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 46007788 - 46007948
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||||||||||||||||||||| |||||  ||||||||||||||||||| ||||| |||||||||| ||||||| |||| ||||||   |||||||||    
T  46007788 tttaaaaagttaacatattaacatgataaatgatcatataatacttcaatctcacttaatttattttacaaaaacaagttatatagtctgcaatttaaaa 46007887  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaag 161  Q
    |||||||||||| |||||||||||||| |||||||||||||| ||| ||||| || |||||    
T  46007888 aagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacacactctaag 46007948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 54935226 - 54935067
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataa-tacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaa 99  Q
    |||||||||||| |||||||| || |||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||| | |||||||||    
T  54935226 tttaaaaagttatcatattaatatgataaacgatcatataaatacttcaatcacacttaatttattttagaaaaacatgttatatagttcgtaatttaaa 54935127  T
Q  100 aaagaaaagtaaatcct-cccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    ||||||||||||| ||| ||||||||||| |||||||||||||| ||| ||||| |||||    
T  54935126 aaagaaaagtaaaccctccccctcccttcccctcctaaaccctcaatccaaacacaccct 54935067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 49735555 - 49735696
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||||||||||| ||||||||| |||||| || |||||||| ||| ||||||||||||||||||||||||||||||||| ||||||| || |||||||    
T  49735555 tttaaaaagttaacctattaacatgataaacgataatataatatttctatcacacttgatttattttagaaaaacatgttatatagtccgtagtttaaaa 49735654  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaaccctcc 143  Q
    ||||||| |||| |||||||||||||| |||||||||||||||    
T  49735655 aagaaaactaaa-cctcccctcccttcccctcctaaaccctcc 49735696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 8 - 160
Target Start/End: Complemental strand, 26167087 - 26166935
Alignment:
Q  8 agttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaa 107  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||  |||||||||||||||||    
T  26167087 agttaacatattaacatgataaacgatcatataatacttcaatcacacttaatttattttagagaaacatgttatatagtctgtaatttaaaaaagaaaa 26166988  T
Q  108 gtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
      |||  ||||||||| ||| |||||||||||||| ||| ||||| |||||||    
T  26166987 acaaactctcccctccattcccctcctaaaccctcaatccaaacacaccctaa 26166935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 16400957 - 16400816
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||| | || ||||||||||||||||||||||  |||||   || | |||||    
T  16400957 tttaaaaagttaacatattaacatgataaacgatcatataatacttcaatcataattaatttattttagaaaaacatgttgtatagtttgtagtataaaa 16400858  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaaccctc 142  Q
    || |||||| ||||||||||||||||||||||||||||||||    
T  16400857 aataaaagtgaatcctcccctcccttctcctcctaaaccctc 16400816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 54320591 - 54320435
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||| || ||||||  ||||||||||    
T  54320591 tttaaaaagttagcatattaacatgataaacaatcatataatactccaatcacacttaatttattttagaaaaacatgatatatagtcggtaatttaaaa 54320492  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    |||||||  ||| ||| |||||||||  |||||||||||||| ||| ||||| |||||    
T  54320491 aagaaaatcaaaccct-ccctccctttccctcctaaaccctcaatccaaacacaccct 54320435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 27735902 - 27735751
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||| ||||| ||||||||||| |||||  ||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||| ||||||||||    
T  27735902 tttaaagagttagcatattaacatgataaatgatcatataatacttcaatcacacttaatttattttaaaaaaacatgttatatagtccgtaatttaaaa 27735803  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    | ||||| |||| |||| | ||||||| |||||||||||||| ||| |||||    
T  27735802 atgaaaattaaaccctctcttcccttcccctcctaaaccctcgatccaaaca 27735751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 106
Target Start/End: Complemental strand, 35248839 - 35248738
Alignment:
Q  5 aaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaaga 104  Q
    |||||||||| ||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||    
T  35248839 aaaagttaacgtattaacatgataaataatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaaaga 35248740  T
Q  105 aa 106  Q
    ||    
T  35248739 aa 35248738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 47433796 - 47433956
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgtta-catagtccataatttaaa 99  Q
    |||||||| |||| ||| ||||||| ||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||  ||||||  |||||||||    
T  47433796 tttaaaaaattaaaataataacata-taaacgatcatataatacttcaatcacacttaatttattttaaaaaaacatgttattatagtctgtaatttaaa 47433894  T
Q  100 aaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaag 161  Q
    ||||||||||||| ||||| |||||||| ||||||||||| || | | ||||| ||||||||    
T  47433895 aaagaaaagtaaaccctcctctcccttcccctcctaaaccgtcaacccaaacacaccctaag 47433956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 41174502 - 41174397
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||||||||| |||||||||||||||||  |||||||||||| ||||||||| ||||||||||||||||||||||| || ||||||| ||||||||||    
T  41174502 tttaaaaagttagcatattaacataataaatgatcatataatacatcaatcacatttgatttattttagaaaaacatgctatatagtccctaatttaaaa 41174403  T
Q  101 aagaaa 106  Q
    ||||||    
T  41174402 aagaaa 41174397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 37711286 - 37711174
Alignment:
Q  15 atattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatc 114  Q
    |||||||||| |||||  ||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||| |||||||||||||||||  ||| |    
T  37711286 atattaacatgataaatgatcatataatacttcaatcacacttaatttattttagagaaacatgttatatagtccgtaatttaaaaaagaaaaacaaacc 37711187  T
Q  115 ctcccctcccttc 127  Q
    |||||||||||||    
T  37711186 ctcccctcccttc 37711174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 8 - 142
Target Start/End: Original strand, 5730924 - 5731059
Alignment:
Q  8 agttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataattt-aaaaaagaaa 106  Q
    ||||||||||||||||| |||||  |||||||||||||||||| |||||| |||||||||||| |||||||||| ||||||| |||||| ||||||| ||    
T  5730924 agttaacatattaacatgataaatgatcatataatacttcaattacacttaatttattttagagaaacatgttatatagtccgtaatttaaaaaaagtaa 5731023  T
Q  107 agtaaatcctcccctcccttctcctcctaaaccctc 142  Q
    |  |||  ||||||||||||| ||||||||||||||    
T  5731024 aacaaactctcccctcccttcccctcctaaaccctc 5731059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 24565433 - 24565572
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||||||||||| ||||||| | |||||||| ||||||||||||||||||| ||    ||||| ||||||||||||||| |||| || ||||||||||    
T  24565433 tttaaaaagttaacttattaacgtgataaacaaacatataatacttcaatcacgct--cattattatagaaaaacatgttatatagcccgtaatttaaaa 24565530  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaaccctc 142  Q
    |||||| |||||| || |||||||||| ||||||||||||||    
T  24565531 aagaaatgtaaattcttccctcccttcccctcctaaaccctc 24565572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 36151729 - 36151632
Alignment:
Q  5 aaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaa 102  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||  ||||||| ||||    
T  36151729 aaaagttaacatattaacatgataaacgatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatagtctgtaatttataaaa 36151632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 45132588 - 45132741
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    ||||||||||||||||||||| || |||||| ||||||||||||||||||||||||| |||||||||      |||| ||| ||||||| ||||||||||    
T  45132588 tttaaaaagttaacatattaaaatgataaacgatcatataatacttcaatcacacttaatttatttt------acatattatatagtccgtaatttaaaa 45132681  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    |||||||||||| | || |||| |||| |||||||||| ||| ||  ||||| |||||||    
T  45132682 aagaaaagtaaaccatctcctctcttcccctcctaaactctcaattcaaacacaccctaa 45132741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 10 - 152
Target Start/End: Original strand, 2247899 - 2248039
Alignment:
Q  10 ttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagt 109  Q
    ||||| |||||| || ||||||||| |||||||||||||||||||| | |||| |||||||||||||||||| ||| ||  |||||||||||||||||||    
T  2247899 ttaacttattaatatgataaacaattatataatacttcaatcacacat-attttttttagaaaaacatgttatata-tctgtaatttaaaaaagaaaagt 2247996  T
Q  110 aaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    |||  ||||| || ||||||||||||||||||| ||| |||||    
T  2247997 aaactctcccttcacttctcctcctaaaccctcaatccaaaca 2248039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 29798442 - 29798288
Alignment:
Q  1 tttaaaaagttaacatattaa-cataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaa 99  Q
    |||||||| ||||||| |||| |||||||||| |||||||||||||||||||||||||||||||    |||||||||||||| ||||||  |||||||||    
T  29798442 tttaaaaaattaacatgttaaacataataaacgatcatataatacttcaatcacacttgattta----agaaaaacatgttatatagtctgtaatttaaa 29798347  T
Q  100 aaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    ||| |||||||||   ||| ||| |||| ||||||||||| || ||| ||||| |||||    
T  29798346 aaataaaagtaaactatcctctctcttcccctcctaaaccatcaatccaaacacaccct 29798288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 17 - 158
Target Start/End: Complemental strand, 56135890 - 56135749
Alignment:
Q  17 attaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcct 116  Q
    |||||||| |||||  |||||||||||||||||  |||||| |||||||||| |||||||| |||||| || | |||||||||||| |||| | || |||    
T  56135890 attaacatgataaatgatcatataatacttcaaaaacacttaatttattttaaaaaaacattttacattgttcgtaatttaaaaaataaaaatgaaccct 56135791  T
Q  117 cccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    ||||||||||| |||||||||||||| ||| ||||| |||||    
T  56135790 cccctcccttcccctcctaaaccctcaatccaaacacaccct 56135749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 156
Target Start/End: Complemental strand, 6891514 - 6891362
Alignment:
Q  4 aaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaag 103  Q
    ||||| |||| ||| |||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |   || ||||||||||    
T  6891514 aaaaaattaaaataataacattataaacgatcatataatacttcaatcacacttaatttattttagaaaaacatgttatataatttgtattttaaaaaag 6891415  T
Q  104 aaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagacc 156  Q
    |||| ||||   ||||||| |||| ||| |||||||||| ||  |||||||||    
T  6891414 aaaaataaactatcccctctcttccccttctaaaccctcaatttaaacagacc 6891362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 114
Target Start/End: Complemental strand, 44784141 - 44784036
Alignment:
Q  9 gttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaag 108  Q
    |||||||||||||| | |||||| ||||||||||||||||||||||||| ||||| ||||||||||| ||||| || ||   ||||||||||||||||||    
T  44784141 gttaacatattaaccttataaacgatcatataatacttcaatcacacttaatttactttagaaaaacctgttatatggtatgtaatttaaaaaagaaaag 44784042  T
Q  109 taaatc 114  Q
    ||||||    
T  44784041 taaatc 44784036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 20 - 152
Target Start/End: Original strand, 47846161 - 47846294
Alignment:
Q  20 aacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaa-catgttacatagtccataatttaaaaaagaaaagtaaatcctcc 118  Q
    ||||| ||||| ||||||||||||||||||  |||||| |||||||||| ||||| ||  |||||| || |||||||||||||| ||||||||| |||||    
T  47846161 aacatgataaataatcatataatacttcaaaaacacttaatttattttaaaaaaaacactttacattgttcataatttaaaaaataaaagtaaaccctcc 47846260  T
Q  119 cctcccttctcctcctaaaccctccatcgaaaca 152  Q
    | |||||||||||| ||||||||| ||| |||||    
T  47846261 catcccttctcctcttaaaccctcaatccaaaca 47846294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 17938194 - 17938352
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattt-tagaaaaacatgttacatagtccataatttaaa 99  Q
    |||||||| |||| ||| |||||| |||||| ||||||||||||||||||||||||| ||||||||  | ||||| |||||| |||||   |||||||||    
T  17938194 tttaaaaatttaaaataataacatgataaacgatcatataatacttcaatcacacttaatttatttaaaaaaaaatatgttatatagtttgtaatttaaa 17938293  T
Q  100 aaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    |||||||||||||  |||  |||||||| |||||||||  ||| ||| ||||| |||||    
T  17938294 aaagaaaagtaaactctcatctcccttcccctcctaaattctcaatccaaacataccct 17938352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 160
Target Start/End: Complemental strand, 22921114 - 22920979
Alignment:
Q  26 ataaacaatcatataatacttcaatcacactt-gatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctccc 124  Q
    |||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||  ||||   |||||||||||||||| |||||| |||| |||      
T  22921114 ataaacgatcatataatacttcaatcacactttgatttattctagaaaaacatgttatgtagtttgtaatttaaaaaagaaacgtaaattctcctctctt 22921015  T
Q  125 ttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    ||  ||||||||||| || ||| ||||| |||||||    
T  22921014 tttccctcctaaaccatcaatccaaacacaccctaa 22920979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 160
Target Start/End: Original strand, 22970685 - 22970820
Alignment:
Q  26 ataaacaatcatataatacttcaatcacactt-gatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctccc 124  Q
    |||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||  ||||   |||||||||||||||| |||||| |||| |||      
T  22970685 ataaacgatcatataatacttcaatcacactttgatttattctagaaaaacatgttatgtagtttgtaatttaaaaaagaaacgtaaattctcctctctt 22970784  T
Q  125 ttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    ||  ||||||||||| || ||| ||||| |||||||    
T  22970785 tttccctcctaaaccatcaatccaaacacaccctaa 22970820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 2917061 - 2917150
Alignment:
Q  12 aacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaa 101  Q
    ||||||||||||| |||||| |||||||||||||||||||||| |  ||||||||||||||| ||||||| |||||||  ||||||||||    
T  2917061 aacatattaacatgataaacgatcatataatacttcaatcacaataaatttattttagaaaatcatgttatatagtccggaatttaaaaa 2917150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 114
Target Start/End: Complemental strand, 28332948 - 28332848
Alignment:
Q  14 catattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaat 113  Q
    ||||||||| |  ||||| |||||||||||||||||||| |||| ||||| ||||||||||| ||||| |||||   |||||||||||||||||||||||    
T  28332948 catattaacctggtaaacgatcatataatacttcaatcatacttaatttactttagaaaaacctgttatatagtatgtaatttaaaaaagaaaagtaaat 28332849  T
Q  114 c 114  Q
    |    
T  28332848 c 28332848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 33 - 160
Target Start/End: Original strand, 17182604 - 17182731
Alignment:
Q  33 atcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctc 132  Q
    |||||||||||||||||  |||||| |||||||||| ||||| || |||| | || | |||||||||||| |||||||| ||||||| ||| ||| ||||    
T  17182604 atcatataatacttcaaaaacacttaatttattttaaaaaaatattttaccttgttcgtaatttaaaaaataaaagtaagtcctcccttcctttcccctc 17182703  T
Q  133 ctaaaccctccatcgaaacagaccctaa 160  Q
     ||||||||| ||| ||||| |||||||    
T  17182704 ataaaccctcaatccaaacacaccctaa 17182731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 33 - 124
Target Start/End: Complemental strand, 55510295 - 55510204
Alignment:
Q  33 atcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctccc 124  Q
    |||||||||||||||| |||||||| |||||||||| |||||||| |||||| |||  ||| ||||||| ||||||||| ||||||||||||    
T  55510295 atcatataatacttcagtcacacttaatttattttaaaaaaacattttacattgtctttaaattaaaaatgaaaagtaagtcctcccctccc 55510204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 161
Target Start/End: Original strand, 54935241 - 54935316
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaag 161  Q
    |||| ||||||||||| ||||| |||| |||||||||||||| |||||||||||||||||| ||||| ||||||||    
T  54935241 gtccgtaatttaaaaatgaaaaataaaccctcccctcccttcccctcctaaaccctccatccaaacacaccctaag 54935316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 33 - 158
Target Start/End: Original strand, 21695008 - 21695132
Alignment:
Q  33 atcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctc 132  Q
    ||||||||||||||||||||||||| |||||||  | ||||| |  ||| || ||||||||||||||| ||||||||||| ||||| || ||||| ||||    
T  21695008 atcatataatacttcaatcacacttaatttattaaa-aaaaataaattatattgtccataatttaaaatagaaaagtaaaccctccgcttccttcccctc 21695106  T
Q  133 ctaaaccctccatcgaaacagaccct 158  Q
     ||||||| | ||| ||||| |||||    
T  21695107 ataaacccccaatccaaacacaccct 21695132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 43961548 - 43961459
Alignment:
Q  20 aacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagt 109  Q
    ||||| |||||  |||||||||||||||||  |||||| |||||||||| |||||||| |||||| || |||||||||||||| ||||||    
T  43961548 aacatgataaatgatcatataatacttcaaaaacacttaatttattttaaaaaaacattttacattgttcataatttaaaaaataaaagt 43961459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 160
Target Start/End: Original strand, 37711295 - 37711369
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    |||| ||||||||||| ||||  |||| |||||||||||||| |||||||||||||||||| ||||| |||||||    
T  37711295 gtccgtaatttaaaaatgaaatctaaaccctcccctcccttcccctcctaaaccctccatccaaacacaccctaa 37711369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 34995189 - 34995100
Alignment:
Q  20 aacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagt 109  Q
    ||||| ||||| |||| |||||||||||||  |||||| ||||||||||||||||||| | |||| || | |||||||||||| ||||||    
T  34995189 aacatgataaataatcttataatacttcaaaaacacttaatttattttagaaaaacatttcacattgttcgtaatttaaaaaataaaagt 34995100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 152
Target Start/End: Original strand, 47846369 - 47846501
Alignment:
Q  20 aacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaa-catgttacatagtccataatttaaaaaagaaaagtaaatcctcc 118  Q
    ||||| ||||| ||||||||||||||||||  | |||| |||||||| | ||||| ||  |||||| || |||||||||||||| ||||||||| | |||    
T  47846369 aacatgataaataatcatataatacttcaaa-atacttaatttatttaaaaaaaaacactttacattgttcataatttaaaaaataaaagtaaaccttcc 47846467  T
Q  119 cctcccttctcctcctaaaccctccatcgaaaca 152  Q
      |||||||||||| ||||||||| ||| |||||    
T  47846468 tttcccttctcctcttaaaccctcaatccaaaca 47846501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 158
Target Start/End: Complemental strand, 49735540 - 49735468
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    |||| ||||||||||| ||||||| || |||||||||||||| |||||||||||||| ||| ||||| |||||    
T  49735540 gtccgtaatttaaaaatgaaaagtgaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 49735468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 86 - 161
Target Start/End: Original strand, 37761636 - 37761711
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaag 161  Q
    ||||||||||||||||||||||| ||  |||||||||||||| |||  |||| |||||||| ||||| ||||||||    
T  37761636 gtccataatttaaaaaagaaaaggaagccctcccctcccttccccttttaaatcctccatccaaacacaccctaag 37761711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 86 - 152
Target Start/End: Complemental strand, 54576399 - 54576333
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    |||| |||| ||||||||||||||||  |||||||||||||| ||| |||||||||||||| |||||    
T  54576399 gtccgtaatctaaaaaagaaaagtaagccctcccctcccttccccttctaaaccctccatccaaaca 54576333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 152
Target Start/End: Complemental strand, 4437496 - 4437431
Alignment:
Q  87 tccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    ||||||||||||||||||||| ||| || |||||||||||  | |||||||||||||||| |||||    
T  4437496 tccataatttaaaaaagaaaaataagtcatcccctccctttccatcctaaaccctccatccaaaca 4437431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 143
Target Start/End: Complemental strand, 21694962 - 21694905
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctcc 143  Q
    |||| |||||||||||||||||||||  |||||| ||||||| |||||||||||||||    
T  21694962 gtccgtaatttaaaaaagaaaagtaagccctcccgtcccttcccctcctaaaccctcc 21694905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 34110962 - 34110897
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattt 66  Q
    |||||||||||||||||||||||| |||||| ||||||||||| || || |||||||  |||||||    
T  34110962 tttaaaaagttaacatattaacatgataaacgatcatataatattttaagcacacttactttattt 34110897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 160
Target Start/End: Complemental strand, 47694487 - 47694347
Alignment:
Q  20 aacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaag-aaaagtaaatcctcc 118  Q
    ||||| |||||  ||||||||||||||||| | ||||||||| ||||||| ||| ||| | | |  |||| |||||||||| || ||||||||  |||||    
T  47694487 aacatgataaatgatcatataatacttcaaccgcacttgattgattttag-aaagcatttcatagtgtccgtaatttaaaagagaaaaagtaagccctcc 47694389  T
Q  119 cctcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    |||||||||  |||| ||| |||||||| ||||| |||||||    
T  47694388 cctcccttccgctccaaaatcctccatccaaacataccctaa 47694347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 160
Target Start/End: Complemental strand, 22186841 - 22186717
Alignment:
Q  36 atataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctccta 135  Q
    ||||||||||||||  |||||| |||||||||| |||||||| |||| | ||   |||||||||||  |||||| ||  || |||||||||| | |||||    
T  22186841 atataatacttcaaaaacactttatttattttaaaaaaacattttacgttgtttgtaatttaaaaattaaaagtgaactctgccctcccttcccttccta 22186742  T
Q  136 aaccctccatcgaaacagaccctaa 160  Q
    ||||||| ||| ||| | |||||||    
T  22186741 aaccctcaatccaaatacaccctaa 22186717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 91 - 163
Target Start/End: Original strand, 34995226 - 34995298
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaagca 163  Q
    ||||||||||||||||||||| || | ||||| |||| | |||||||||||| ||| ||||| ||||||||||    
T  34995226 taatttaaaaaagaaaagtaagtcttaccctcacttcccttcctaaaccctcaatctaaacacaccctaagca 34995298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 35248858 - 35248918
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatc 146  Q
    |||||||||||||||  |||||||||| |||||||||||| |  |||||||||||||||||    
T  35248858 gtccataatttaaaattgaaaagtaaaccctcccctccctacctctcctaaaccctccatc 35248918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 86 - 158
Target Start/End: Original strand, 41174517 - 41174589
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    |||| ||| ||||||| ||||| |||| | |||||||||||| |||||||||||||||||| ||||| |||||    
T  41174517 gtccctaaattaaaaatgaaaactaaaccatcccctcccttcccctcctaaaccctccatccaaacacaccct 41174589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 158
Target Start/End: Original strand, 5825073 - 5825140
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    ||||| ||||||||||||||||||||| || | ||||  ||||||||||||||||| ||||| |||||    
T  5825073 taattcaaaaaagaaaagtaaatcctctccccacttcctctcctaaaccctccatccaaacacaccct 5825140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 158
Target Start/End: Original strand, 7977602 - 7977741
Alignment:
Q  20 aacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaa-catgttacatagtccataatttaaaaaagaaaagtaaatcctcc 118  Q
    ||||| |||||  |||||||||||||||||  ||| || ||||| |||| ||||| ||| ||||||  | | |||||||||||| |||| | || |||||    
T  7977602 aacatgataaatgatcatataatacttcaaaaacaattaatttactttaaaaaaaacattttacattcttcgtaatttaaaaaataaaattgaaccctcc 7977701  T
Q  119 cctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    ||||| ||| |||| ||||||||| ||| ||||| |||||    
T  7977702 cctcctttcccctcataaaccctcaatccaaacacaccct 7977741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 123
Target Start/End: Original strand, 4437544 - 4437633
Alignment:
Q  33 atcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcc 123  Q
    |||||||||||||||||  ||||||||||||||||  |||||||| |||||| ||   |||||||||||| |||| | || ||||||||||    
T  4437544 atcatataatacttcaaaaacacttgatttatttt-taaaaacattttacattgtttttaatttaaaaaataaaaatgaaccctcccctcc 4437633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 6938356 - 6938302
Alignment:
Q  83 atagtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaa 137  Q
    ||||||| ||||||||||| ||||| ||||||||| ||||||||| |||||||||    
T  6938356 atagtccgtaatttaaaaaggaaaaataaatcctctcctcccttcccctcctaaa 6938302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 161
Target Start/End: Complemental strand, 44145840 - 44145770
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaag 161  Q
    |||||||||||| |||||| | ||||||||||||||| ||||||||||| |  ||| ||||| ||||||||    
T  44145840 taatttaaaaaataaaagtgagtcctcccctcccttcccctcctaaaccttgaatccaaacacaccctaag 44145770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 160
Target Start/End: Original strand, 54320606 - 54320680
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    |||| |||||||||||  ||||  ||| |||||||||||||| |||||||||||||| ||| ||||| |||||||    
T  54320606 gtccgtaatttaaaaattaaaatcaaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 54320680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 54494769 - 54494723
Alignment:
Q  27 taaacaatcatataatacttcaatcacacttgatttattttagaaaa 73  Q
    ||||||||||||||||||||||||||||||| | |||||||| ||||    
T  54494769 taaacaatcatataatacttcaatcacacttaacttattttaaaaaa 54494723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 146
Target Start/End: Complemental strand, 17938179 - 17938119
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatc 146  Q
    |||||||||||||||| ||||| ||||  || |||||| ||| ||||||||||||||||||    
T  17938179 gtccataatttaaaaacgaaaattaaactcttccctccattcccctcctaaaccctccatc 17938119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 158
Target Start/End: Original strand, 45742062 - 45742134
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    |||| ||||||||||| ||||||||||  ||||||||||||  || |||||||||| |||| ||||| |||||    
T  45742062 gtccgtaatttaaaaatgaaaagtaaactctcccctccctttcccgcctaaacccttcatccaaacacaccct 45742134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 91 - 158
Target Start/End: Original strand, 6938424 - 6938491
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    ||||||||||| ||||||| || |||||||||| ||| |||| |||||| |||||| ||||| |||||    
T  6938424 taatttaaaaatgaaaagtgaaccctcccctccattcccctcataaaccttccatccaaacacaccct 6938491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 160
Target Start/End: Complemental strand, 31348393 - 31348314
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctc-----ctaaaccctccatcgaaacagaccctaa 160  Q
    |||| ||||||||||| |||||||||| ||| |||||||||| ||||     |||||||||||||| ||||| |||||||    
T  31348393 gtccgtaatttaaaaatgaaaagtaaacccttccctcccttcccctcataaactaaaccctccatccaaacacaccctaa 31348314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 160
Target Start/End: Original strand, 36151750 - 36151820
Alignment:
Q  89 cataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    ||||||||||||| ||||||||||| || || | ||||| ||||||||| |||||||| ||||| |||||||    
T  36151750 cataatttaaaaatgaaaagtaaattctacctttccttc-cctcctaaatcctccatctaaacacaccctaa 36151820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 109 - 160
Target Start/End: Original strand, 49735687 - 49735738
Alignment:
Q  109 taaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    |||| |||||||||||||| |||||||||||||| ||| ||||| |||||||    
T  49735687 taaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 49735738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 160
Target Start/End: Complemental strand, 5730902 - 5730828
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    |||| ||||||||||| ||||  |||| |||||| || |||  |||||||||||||||||| ||||| |||||||    
T  5730902 gtccgtaatttaaaaatgaaatctaaaccctcccatctctttccctcctaaaccctccatccaaacacaccctaa 5730828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 152
Target Start/End: Original strand, 27735917 - 27735983
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    |||| ||||||||||| ||||| | || |||  ||||||||| |||||||||||||||||| |||||    
T  27735917 gtccgtaatttaaaaatgaaaaatgaaccctatcctcccttcccctcctaaaccctccatccaaaca 27735983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 14539410 - 14539357
Alignment:
Q  20 aacataataaacaatcatataatacttcaatcacacttgatttattttagaaaa 73  Q
    |||||||||||  |||||||||||||||||  |||||| |||||||||| ||||    
T  14539410 aacataataaatgatcatataatacttcaaaaacacttaatttattttaaaaaa 14539357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 123
Target Start/End: Complemental strand, 17182551 - 17182518
Alignment:
Q  90 ataatttaaaaaagaaaagtaaatcctcccctcc 123  Q
    ||||||||||||||||||||||||| ||||||||    
T  17182551 ataatttaaaaaagaaaagtaaatcttcccctcc 17182518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 137
Target Start/End: Original strand, 29993893 - 29993994
Alignment:
Q  36 atataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctccta 135  Q
    ||||||||||||||  | |||| || ||||||| |||||| | |||||| || | |||||||||||  |||||| || |||||||||| ||  |||||||    
T  29993893 atataatacttcaaaaatacttaatctattttaaaaaaactttttacattgttcgtaatttaaaaagtaaaagtgaaccctcccctccatttccctccta 29993992  T
Q  136 aa 137  Q
    ||    
T  29993993 aa 29993994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 158
Target Start/End: Complemental strand, 53260759 - 53260718
Alignment:
Q  117 cccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    ||||||||||| |||||||||||||||||| ||||| |||||    
T  53260759 cccctcccttcccctcctaaaccctccatccaaacacaccct 53260718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 152
Target Start/End: Complemental strand, 55080717 - 55080585
Alignment:
Q  20 aacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctccc 119  Q
    ||||| |||||  |||||| ||||||||||  |||||| | |||||||  |||||||| |||||| || | ||||||| |||| |||| | || | || |    
T  55080717 aacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgttcgtaatttacaaaataaaaatgaaccatctc 55080618  T
Q  120 ctcccttctcctcctaaaccctccatcgaaaca 152  Q
    ||| ||||  ||||||||||||| ||| |||||    
T  55080617 ctctcttcctctcctaaaccctcaatccaaaca 55080585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 100; Significance: 2e-49; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 30487392 - 30487543
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||| || |||||||    
T  30487392 tttaaaaagtcaacatattaacatgataaacaataatataatacttcaatcacacttgatttattttataaaaacatgttatatagtccgtagtttaaaa 30487491  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    || |||| |||| ||||| |||||||| |||||||||||||| |||||||||    
T  30487492 aataaaactaaaccctccactcccttcccctcctaaaccctcaatcgaaaca 30487543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 33236108 - 33235949
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||  ||| ||||||||||||||||||||||| ||||||| ||||||||||    
T  33236108 tttaaaaagttaacatattaacatgataaacaatcatataattcttcaatcagtcttaatttattttagaaaaacatgttatatagtccgtaatttaaaa 33236009  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    ||||||||||||   ||| ||||||||||| |||||| |||| ||| ||| | |||||||    
T  33236008 aagaaaagtaaactttccactcccttctccacctaaatcctcaatccaaatacaccctaa 33235949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 31849267 - 31849126
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||||| ||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||  || |||||||    
T  31849267 tttaaaaaattaacatattaacgtgataaacaataatataatacttcaatcacacttgatttattttagaaaaatatgttatatagtctgtagtttaaaa 31849168  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaaccctc 142  Q
    ||||||| |||| |||||||||||||| |||| |||||||||    
T  31849167 aagaaaactaaaccctcccctcccttcccctcttaaaccctc 31849126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 4097599 - 4097751
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttag-aaaaacatgttacatagtccataatttaaa 99  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||| | ||||| |||||| || |||| |||||||||    
T  4097599 tttaaaaagttaacatattaacatgataaacgatcatataatacttcaatcacacttaatttattttggaaaaaaaatgttatattgtccgtaatttaaa 4097698  T
Q  100 aaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    |||||||||| || ||| |||||||||| |||| ||||||||| ||| |||||    
T  4097699 aaagaaaagtgaacccttccctcccttcccctcttaaaccctcaatccaaaca 4097751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 5 - 145
Target Start/End: Original strand, 2892694 - 2892834
Alignment:
Q  5 aaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaaga 104  Q
    |||| |||| ||| |||||| |||||||||||||||||| ||||||||||||  ||||||||||||||||| ||||| ||||||| || |||||||||||    
T  2892694 aaaaattaaaataataacatgataaacaatcatataatatttcaatcacactaaatttattttagaaaaacgtgttatatagtccgtagtttaaaaaaga 2892793  T
Q  105 aaagtaaatcctcccctcccttctcctcctaaaccctccat 145  Q
    ||||||||| ||||||||||||| ||| | |||||||||||    
T  2892794 aaagtaaattctcccctcccttcgccttccaaaccctccat 2892834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 15 - 152
Target Start/End: Original strand, 19278139 - 19278275
Alignment:
Q  15 atattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatc 114  Q
    |||||||||| |||||| ||||||| |||||||||||| |||  ||||||||||||||||||||||| ||||||| ||||||||||||||||| |||| |    
T  19278139 atattaacatgataaacgatcatatgatacttcaatcagactaaatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaa-taaacc 19278237  T
Q  115 ctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    ||||||||||||| |||||||||| ||| ||| |||||    
T  19278238 ctcccctcccttcccctcctaaactctcaatccaaaca 19278275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 9719118 - 9719273
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||||||||||||||||||  | |||||||||||||||||||||||||||||||  ||||| |||| |||| ||||||| |||||||  |||||||||    
T  9719118 tttaaaaagttaacatattaatttgataaacaatcatataatacttcaatcacactaaatttaattta-aaaagcatgttatatagtccggaatttaaaa 9719216  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccc 157  Q
    ||||||| |||| || |||||| |||| |||| ||||||||| ||| ||||| ||||    
T  9719217 aagaaaattaaacccacccctctcttcccctcataaaccctcaatccaaacacaccc 9719273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 18 - 161
Target Start/End: Original strand, 12811085 - 12811227
Alignment:
Q  18 ttaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctc 117  Q
    ||||||| ||||||||||||||  |||||||||||||||| ||||||||||||||||||| ||| ||||||  ||||||||| |||||||||||  ||||    
T  12811085 ttaacatgataaacaatcatatc-tacttcaatcacacttaatttattttagaaaaacatattatatagtctctaatttaaagaagaaaagtaatccctc 12811183  T
Q  118 ccctcccttctcctcctaaaccctccatcgaaacagaccctaag 161  Q
    ||||| |||| | |||||||||||| ||| ||||| ||||||||    
T  12811184 ccctctcttcccatcctaaaccctcaatccaaacacaccctaag 12811227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 1390476 - 1390319
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaa-aaacatgttacatagtccataatttaaa 99  Q
    |||||||||||||||||||||||| |||||  |||| |||||| |||||||| |||| ||||||||||||| |||||||||||||||||| |||||| ||    
T  1390476 tttaaaaagttaacatattaacatgataaatgatca-ataatatttcaatcaaacttaatttattttagaataaacatgttacatagtccgtaattttaa 1390378  T
Q  100 aaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    |||||||| ||||| ||| |  | |||| |||| ||||||||||||| ||||| |||||    
T  1390377 aaagaaaattaaattctctctgctcttcccctcataaaccctccatccaaacacaccct 1390319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 8 - 158
Target Start/End: Complemental strand, 14515621 - 14515473
Alignment:
Q  8 agttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaa 107  Q
    ||||||||||| ||||| |||||  || ||||||||||||| |||||||| |||||||||||| ||||||  ||  |||||| |||||||||||||||||    
T  14515621 agttaacatatgaacatgataaatgataatataatacttcattcacacttaatttattttagagaaacat--tatctagtccgtaatttaaaaaagaaaa 14515524  T
Q  108 gtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
      ||| |||||||||||||| |||||||||||||| ||| ||||| |||||    
T  14515523 acaaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 14515473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 6 - 96
Target Start/End: Complemental strand, 34176487 - 34176397
Alignment:
Q  6 aaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataattt 96  Q
    |||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||| ||| ||| ||||||    
T  34176487 aaagttaacatattaacataataaacgatcgtataatactgcaatcacacttgatttattttagaaaaacatgttatataatccgtaattt 34176397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 5585389 - 5585486
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaa 98  Q
    ||||||||| ||||||||||||||||||||| || ||| |||| ||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||    
T  5585389 tttaaaaaggtaacatattaacataataaacgattatacaatatttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaa 5585486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 3 - 123
Target Start/End: Complemental strand, 1300775 - 1300654
Alignment:
Q  3 taaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttat-tttagaaaaacatgttacatagtccataatttaaaaa 101  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||| || | ||||| |||||| ||| ||| |||||||||||    
T  1300775 taaaaagttaacatattaacctgataaacaatcatataatacttcaatcacacttaatttatcttgaaaaaaatatgttatataatccgtaatttaaaaa 1300676  T
Q  102 agaaaagtaaatcctcccctcc 123  Q
       |||||||| ||||||||||    
T  1300675 cataaagtaaaccctcccctcc 1300654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 3 - 152
Target Start/End: Original strand, 21606933 - 21607082
Alignment:
Q  3 taaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaa 102  Q
    |||||||||||||||||||||| |||||| ||| |||||||||||| |||||||| ||||||||||||||||||| | | |||||   |||||||||||     
T  21606933 taaaaagttaacatattaacatgataaacgatcgtataatacttcagtcacactttatttattttagaaaaacatataatatagtttgtaatttaaaaac 21607032  T
Q  103 gaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    |||| |||||   ||  ||| |||| |||||||||||||| ||| |||||    
T  21607033 gaaatgtaaacattcatctctcttcccctcctaaaccctcaatccaaaca 21607082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 9721225 - 9721384
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||||||||||||||||||  | |||||||||||||||||||||||||||||||   |||| |||| |||||||||||| || ||||  |||||||||    
T  9721225 tttaaaaagttaacatattaatttgataaacaatcatataatacttcaatcacactaactttaattta-aaaaacatgttatatggtccggaatttaaaa 9721323  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaag 161  Q
    ||||||| |||| || |||||| |||  | || ||||||||| ||  ||||| ||||||||    
T  9721324 aagaaaattaaacccacccctctcttaccttcataaaccctcaattcaaacacaccctaag 9721384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 13583876 - 13583777
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||||| ||||||| |||||||||||||  ||||||||||| ||||||||||||| ||||||||||||||||||||||| ||| ||  ||||||||||    
T  13583876 tttaaaaaattaacatgttaacataataaatgatcatataatatttcaatcacacttaatttattttagaaaaacatgttatataatctgtaatttaaaa 13583777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 10 - 158
Target Start/End: Original strand, 16738092 - 16738239
Alignment:
Q  10 ttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagt 109  Q
    |||| ||| |||||| ||| || |||||||||||||| ||| ||||||  |||||||||||||||||| ||| ||| ||  |||||||||||||||||||    
T  16738092 ttaaaataataacatgatatacgatcatataatacttaaataacacttactttattttagaaaaacattttatataatctgtaatttaaaaaagaaaagt 16738191  T
Q  110 aaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    |||  ||||||| ||||| | |||||||||||| ||| ||||| |||||    
T  16738192 aaactctcccct-ccttcccatcctaaaccctcaatccaaacaaaccct 16738239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 10348885 - 10348992
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttatttt-agaaaaacatgttacatagtccataatttaaa 99  Q
    ||||||||||||||||||||| |  |||||| || |||||||||||||||| ||||||| ||||||| | |||||||||||| ||||||| |||||||||    
T  10348885 tttaaaaagttaacatattaatacgataaacgataatataatacttcaatcgcacttgaattattttaaaaaaaacatgttatatagtccgtaatttaaa 10348984  T
Q  100 aaagaaaa 107  Q
    ||| ||||    
T  10348985 aaaaaaaa 10348992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 33041619 - 33041488
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||||||||||||||||||||| |||||        ||| ||||||||||||||| |||||||||| |||||||  ||| |||||| |||||||||||    
T  33041619 tttaaaaagttaacatattaacatgataaa--------taacacttcaatcacacttaatttattttaaaaaaacacattatatagtctataatttaaaa 33041528  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaaccc 140  Q
    | ||||| ||||| ||||||||| |||  |||||||||||    
T  33041527 atgaaaaataaattctcccctcctttcctctcctaaaccc 33041488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 43 - 142
Target Start/End: Original strand, 6034201 - 6034300
Alignment:
Q  43 acttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctc 142  Q
    ||||||||||||||| ||||||||||||||||||||||| | ||||   ||||||||||||||||||||||||||   ||||||  ||||| ||||||||    
T  6034201 acttcaatcacacttaatttattttagaaaaacatgttatacagtctgcaatttaaaaaagaaaagtaaatcctcttttccctttccctccgaaaccctc 6034300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 25741564 - 25741474
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccat 91  Q
    ||||||||||||||||| ||| || |||||| ||||||||| |||||| |||| ||| |||||||||| |||||||||||| |||||||||    
T  25741564 tttaaaaagttaacataataatatgataaacgatcatataaaacttcagtcacgcttaatttattttaaaaaaacatgttatatagtccat 25741474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 2893752 - 2893676
Alignment:
Q  36 atataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaa 112  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||| ||||||  || |||||||| ||||||||||    
T  2893752 atataatacatcaatcacacttaatttattttagaaaaacatgttatatagtctgtagtttaaaaacgaaaagtaaa 2893676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 10 - 152
Target Start/End: Original strand, 30850008 - 30850150
Alignment:
Q  10 ttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagt 109  Q
    |||| ||| |||||| |||||| |||||||||||||||||| | |||  |||| ||||| |||||||| ||| ||| | |||||||||||| | ||||||    
T  30850008 ttaaaataataacatgataaacgatcatataatacttcaattatactaaatttgttttaaaaaaacatattatataattcataatttaaaataaaaaagt 30850107  T
Q  110 aaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    |||  ||||| || |||  |||||||||||||| ||| |||||    
T  30850108 aaactctcccttctctttccctcctaaaccctcaatccaaaca 30850150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 1395793 - 1395692
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttatttta-gaaaaacatgttacatagtccataatttaaa 99  Q
    |||||||| ||||||||||| ||| |||||  ||||| || || ||||||||||||| ||||||||||  |||||||||||||||||||| ||||| |||    
T  1395793 tttaaaaaattaacatattagcatgataaatgatcatgtattatttcaatcacacttaatttattttataaaaaacatgttacatagtccgtaattaaaa 1395694  T
Q  100 aa 101  Q
    ||    
T  1395693 aa 1395692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 10818373 - 10818229
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    |||||||  ||||||||||||||| |||||  |||||||||||||||||||||| ||             ||||||||||| || |||| ||||||||||    
T  10818373 tttaaaatattaacatattaacatgataaatgatcatataatacttcaatcacattt-------------aaaacatgttatattgtccgtaatttaaaa 10818287  T
Q  101 aagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    ||||||| ||||   |||||||||||| |||||||||||||| ||| ||||| |||||    
T  10818286 aagaaaaataaacaatcccctcccttcccctcctaaaccctcaatccaaacacaccct 10818229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 26318478 - 26318543
Alignment:
Q  87 tccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    |||||||||||||||||||||||||||| |||||||||||  |||||||||| ||||||| |||||    
T  26318478 tccataatttaaaaaagaaaagtaaatcttcccctccctttccctcctaaactctccatccaaaca 26318543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 29490482 - 29490621
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatt--tattttagaaaaacatgttacatagtccataatttaa 98  Q
    |||||||||||||| ||||||||  |||||  |||||||||||||| |||||| ||| |||  | ||||| |||||||||||| || || | ||||||||    
T  29490482 tttaaaaagttaacgtattaacaagataaaatatcatataatacttaaatcacgcttaattgattttttaaaaaaacatgttagattgt-cgtaatttaa 29490580  T
Q  99 aaaagaaaagtaaatcctcccctcccttctcctcctaaacc 139  Q
    |||| |||| ||||| |||| |||| ||| |||||||||||    
T  29490581 aaaataaaaataaattctcctctcctttcccctcctaaacc 29490621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 160
Target Start/End: Complemental strand, 15353501 - 15353362
Alignment:
Q  20 aacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctccc 119  Q
    ||||| |||||  |||||||||||| ||||  |||||| |||||||| | |||||||| |||||| || | |||||||||||| |||||| |   ||| |    
T  15353501 aacattataaatgatcatataatacatcaaaaacactt-atttatttcaaaaaaacattttacattgttcgtaatttaaaaaataaaagtgagcgctctc 15353403  T
Q  120 ctcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    |||||||| |||||||||||||| ||| ||||| |||||||    
T  15353402 ctcccttcccctcctaaaccctcaatccaaacacaccctaa 15353362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 152
Target Start/End: Complemental strand, 9719103 - 9719037
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    |||| ||||||||||| ||||| ||||||||||||||||||| |||||||||||||| ||| |||||    
T  9719103 gtccgtaatttaaaaatgaaaaataaatcctcccctcccttcccctcctaaaccctcaatccaaaca 9719037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 159
Target Start/End: Original strand, 665937 - 666092
Alignment:
Q  10 ttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttaga------aaaacatgttacatagtccataatttaaaaaag 103  Q
    ||||||||||||||| |||||  || |||||||||||||| ||||||| |||| |||||        ||||||||||  ||||||  || ||||||||||    
T  665937 ttaacatattaacatgataaatgatgatataatacttcaaccacacttaattttttttattttttataaaacatgttgtatagtctgtagtttaaaaaag 666036  T
Q  104 aaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagacccta 159  Q
    |||| ||||  |||| || |||||||||| ||||||| ||||| ||||| ||||||    
T  666037 aaaaataaactctcctcttccttctcctcgtaaaccccccatccaaacatacccta 666092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 160
Target Start/End: Complemental strand, 15323350 - 15323223
Alignment:
Q  33 atcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctc 132  Q
    |||||||||||| |||   |||||| |||||||||| ||| | || |||||| || | |||||||||||| |||||| |   ||| ||||||||| ||||    
T  15323350 atcatataatacatcagaaacacttaatttattttaaaaatatattttacattgttcgtaatttaaaaaataaaagtgagcgctctcctcccttcccctc 15323251  T
Q  133 ctaaaccctccatcgaaacagaccctaa 160  Q
    |||||||||| ||| ||||| |||||||    
T  15323250 ctaaaccctcaatccaaacacaccctaa 15323223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 158
Target Start/End: Complemental strand, 23091118 - 23090995
Alignment:
Q  35 catataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcct 134  Q
    |||||||||||||||  |||||| ||||| |||| ||| |||| ||| || || | |||||||||| | |||||| |  |||||||||||||| ||||||    
T  23091118 catataatacttcaaaaacacttaatttagtttaaaaatacattttagattgttcgtaatttaaaagataaaagtgagccctcccctcccttcccctcct 23091019  T
Q  135 aaaccctccatcgaaacagaccct 158  Q
    ||||| || ||| ||||| |||||    
T  23091018 aaaccttcaatccaaacacaccct 23090995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 91 - 158
Target Start/End: Complemental strand, 30487373 - 30487306
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    |||||||| || ||||||| || |||||||||||||| |||||||||||||||||| ||||| |||||    
T  30487373 taatttaacaatgaaaagtgaaccctcccctcccttcccctcctaaaccctccatccaaacacaccct 30487306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 33 - 111
Target Start/End: Complemental strand, 16509405 - 16509328
Alignment:
Q  33 atcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaa 111  Q
    |||||||||||||||||||||||||||||||||||  |||||||| ||| |  |||  ||||| |||||||||||||||    
T  16509405 atcatataatacttcaatcacacttgatttatttt-taaaaacattttatagtgtctttaattcaaaaaagaaaagtaa 16509328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 87 - 157
Target Start/End: Complemental strand, 16738067 - 16737997
Alignment:
Q  87 tccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccc 157  Q
    ||||||||||||||| |||||||||||| ||||||| ||||  ||| ||||||||||||| ||||| ||||    
T  16738067 tccataatttaaaaacgaaaagtaaatcttcccctctcttcctctcttaaaccctccatccaaacacaccc 16737997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 136
Target Start/End: Original strand, 2892948 - 2893068
Alignment:
Q  19 taacataataaacaatcatataatacttcaatcacac--ttgatttattttagaaaa-acatgttacatagtccataatttaaaaaagaaaagtaaatcc 115  Q
    |||||| |||||| |||||||||||||||||||||||  |  |||||||| | |||| | || ||| ||||| | |||||||||||||||||||||| ||    
T  2892948 taacatgataaacgatcatataatacttcaatcacactataaatttatttaaaaaaatatattttatatagttcgtaatttaaaaaagaaaagtaaaccc 2893047  T
Q  116 tcccctcccttctcctcctaa 136  Q
    ||| || | ||||| ||||||    
T  2893048 tcctcttctttctcatcctaa 2893068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 146
Target Start/End: Original strand, 23091142 - 23091191
Alignment:
Q  97 aaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatc 146  Q
    |||||||||||||||  |||||||||||||| ||||||||||||||||||    
T  23091142 aaaaaagaaaagtaagccctcccctcccttcccctcctaaaccctccatc 23091191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 2900061 - 2900017
Alignment:
Q  7 aagttaacatattaacataataaacaatcatataatacttcaatc 51  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||    
T  2900061 aagttaacatattaacatgataaacaatcatataatacatcaatc 2900017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 86 - 158
Target Start/End: Complemental strand, 9721210 - 9721138
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    |||| ||||||||||| ||||| |||| |||||||||||||| ||||||||||| || ||| ||||| |||||    
T  9721210 gtccgtaatttaaaaatgaaaaataaaccctcccctcccttcccctcctaaaccttcaatccaaacacaccct 9721138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 14515646 - 14515718
Alignment:
Q  89 cataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaag 161  Q
    ||||||||||||| ||||  |||| |||||| | ||||| |||||||||||||||||| ||||| ||||||||    
T  14515646 cataatttaaaaatgaaatctaaaccctccctttccttcccctcctaaaccctccatccaaacacaccctaag 14515718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 146
Target Start/End: Original strand, 10293425 - 10293480
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatc 146  Q
    |||||| ||||||||||||||   ||||||||||||||||||||||||||| ||||    
T  10293425 taatttgaaaaagaaaagtaagctctcccctcccttctcctcctaaacccttcatc 10293480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 157
Target Start/End: Original strand, 10818388 - 10818459
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccc 157  Q
    |||| ||||||||||| |||||||||| |||||||||||| | |||||||||| ||| ||| ||||| ||||    
T  10818388 gtccgtaatttaaaaatgaaaagtaaaccctcccctccctacccctcctaaactctcaatccaaacacaccc 10818459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 142
Target Start/End: Complemental strand, 34176638 - 34176587
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctc 142  Q
    ||||||||||||||||||||| || ||||||||| || ||||||||||||||    
T  34176638 taatttaaaaaagaaaagtaagtcttcccctcccatcccctcctaaaccctc 34176587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 152
Target Start/End: Complemental strand, 19278101 - 19278040
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    ||||||||||| ||||||||||  ||| ||| ||||| |||||||||||||||||| |||||    
T  19278101 taatttaaaaatgaaaagtaaactctctccttccttcccctcctaaaccctccatccaaaca 19278040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 158
Target Start/End: Original strand, 1300792 - 1300864
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    |||| ||||||||||| |||||||||| |||||||||| |||  || | |||||||||||| ||||| |||||    
T  1300792 gtccgtaatttaaaaatgaaaagtaaaccctcccctccattcatcttccaaaccctccatccaaacacaccct 1300864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 25747491 - 25747403
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttatttt-agaaaaacatgttacatagtc 88  Q
    ||||||||||||| ||| |||||| |||||| ||||||||| |||||| ||||  || ||| ||||| | |||||||||||| ||||||    
T  25747491 tttaaaaagttaatataataacatgataaacgatcatataaaacttcagtcacgtttaattgattttaaaaaaaacatgttatatagtc 25747403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 14548711 - 14548794
Alignment:
Q  19 taacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaa 102  Q
    |||||| |||||  ||||||||||  |||||||||| || |||||||||| || ||||| ||| || |||| ||||||||||||    
T  14548711 taacattataaatgatcatataatggttcaatcacagttaatttattttaaaataacattttatattgtccgtaatttaaaaaa 14548794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 32926784 - 32926737
Alignment:
Q  19 taacataataaacaatcatataatacttcaatcacacttgatttattt 66  Q
    |||||| |||||  ||||||||||||||||||||||||| ||||||||    
T  32926784 taacatgataaatgatcatataatacttcaatcacacttaatttattt 32926737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 26318430 - 26318356
Alignment:
Q  33 atcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaa 107  Q
    |||||||||||||||||  |||||| |||||||||| |||||||| ||| ||  | | |||||||||||| ||||    
T  26318430 atcatataatacttcaaaaacacttaatttattttaaaaaaacattttatatttttcgtaatttaaaaaataaaa 26318356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 142
Target Start/End: Complemental strand, 665909 - 665856
Alignment:
Q  89 cataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctc 142  Q
    ||||||||||||| ||||| | || ||||||||| |||| ||||||||||||||    
T  665909 cataatttaaaaatgaaaaatgaaccctcccctcacttcccctcctaaaccctc 665856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 152
Target Start/End: Original strand, 1390496 - 1390557
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    ||||||||||| |||||||||| || | ||||| ||| ||||||||||||| |||| |||||    
T  1390496 taatttaaaaatgaaaagtaaaacccctcctccattcccctcctaaacccttcatccaaaca 1390557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 119
Target Start/End: Complemental strand, 25468471 - 25468438
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctccc 119  Q
    ||||||||||||||||||||||||||| ||||||    
T  25468471 gtccataatttaaaaaagaaaagtaaaacctccc 25468438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 158
Target Start/End: Original strand, 3841258 - 3841330
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    |||| ||||||||||||||||||||| || |||  |  |||| ||||||||||||| |||| ||||| |||||    
T  3841258 gtccgtaatttaaaaaagaaaagtaagtcttccattttcttcccctcctaaacccttcatccaaacacaccct 3841330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 25468521 - 25468565
Alignment:
Q  36 atataatacttcaatcacacttgatttattttagaaaaacatgtt 80  Q
    ||||||||||||||  |||||| |||||||||| |||||||||||    
T  25468521 atataatacttcaaaaacacttaatttattttaaaaaaacatgtt 25468565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 99; Significance: 7e-49; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 39274 - 39434
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttc---aatcacacttgatttattttagaaaaacatgttacatagtccataattta 97  Q
    |||||||||||||||||||||||| |||||  |||||||||||||||   |||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  39274 tttaaaaagttaacatattaacatgataaatgatcatataatacttcttcaatcacacttaatttattttagaaaaacatgttacatagtccgtaattta 39373  T
Q  98 aaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    ||||||||||||||| |||||||||||||  ||| |||||||||| ||| ||||| |||||    
T  39374 aaaaagaaaagtaaaccctcccctccctttcccttctaaaccctcaatccaaacacaccct 39434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 160
Target Start/End: Complemental strand, 39259 - 39184
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccc-tcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    |||| ||||||||||| |||||||||| ||||||| ||  ||| |||||||||||||||||| ||||| |||||||    
T  39259 gtccgtaatttaaaaatgaaaagtaaaccctccccctcatttcccctcctaaaccctccatccaaacacaccctaa 39184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 4 - 160
Target Start/End: Complemental strand, 6737 - 6582
Alignment:
Q  4 aaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaag 103  Q
    ||||| |||| ||||||||||| ||||| ||||||||||||||||||||||||  ||||||||||||| |||| |||| ||||||  |||||||||||||    
T  6737 aaaaaattaaaatattaacata-taaacgatcatataatacttcaatcacactaaatttattttagaataacaagttatatagtctgtaatttaaaaaag 6639  T
Q  104 aaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccctaa 160  Q
    ||||||||| |||||||||||||||||||||||| | || ||| ||||| |||||||    
T  6638 aaaagtaaaccctcccctcccttctcctcctaaaacttcaatccaaacacaccctaa 6582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 79; Significance: 6e-37; HSPs: 2)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 16385 - 16503
Alignment:
Q  3 taaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaa 102  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||| | | |||||||     
T  16385 taaaacgttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttagacaaacatgttatatagtccgtgagttaaaaac 16484  T
Q  103 gaaaagtaaatcctcccct 121  Q
    |||||||||| ||||||||    
T  16485 gaaaagtaaaccctcccct 16503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 16365 - 16296
Alignment:
Q  89 cataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    ||||||||||||| |||||||||| |||||||||| ||  |||||||||||||||||| ||||| |||||    
T  16365 cataatttaaaaatgaaaagtaaaccctcccctccttttccctcctaaaccctccatccaaacaaaccct 16296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 16107 - 15996
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    ||||||||||||||||||||| || | ||||||| ||| |||||||||||||||| | |||| ||||| |||||||||||| ||||||  ||||||||||    
T  16107 tttaaaaagttaacatattaatatgaaaaacaattataaaatacttcaatcacacataattttttttaaaaaaacatgttatatagtctgtaatttaaaa 16008  T
Q  101 aagaaaagtaaa 112  Q
    ||||||||||||    
T  16007 aagaaaagtaaa 15996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 62; Significance: 9e-27; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 1329 - 1178
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatata----atacttcaatcacacttgatttattttagaaaaacatgttacatagtccataattt 96  Q
    |||||||||||||||||||  ||| |||||| ||||||||    |||||||| ||| |||| ||||    ||||| ||||||||||||||||| ||||||    
T  1329 tttaaaaagttaacatattgtcatgataaacgatcatatatataatacttcagtcatacttaattt----tagaataacatgttacatagtccgtaattt 1234  T
Q  97 aaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    ||||||||||||||||  |||||||| |||| |||||||||||||| ||| |||||    
T  1233 aaaaaagaaaagtaaactctcccctctcttcccctcctaaaccctcaatccaaaca 1178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 142
Target Start/End: Original strand, 1516 - 1626
Alignment:
Q  33 atcatataatacttcaatcacacttgatttatttta-gaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcccttctcct 131  Q
    |||||||||||||| ||  | |||| |||||||| | ||||||||| |||||| || | |||||||||||| |||||| |  |||||||||| |||  ||    
T  1516 atcatataatacttaaaaaatacttaatttatttaaagaaaaacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctccattcctct 1615  T
Q  132 cctaaaccctc 142  Q
    |||||||||||    
T  1616 cctaaaccctc 1626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 1461 - 1403
Alignment:
Q  94 tttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    |||||||||||||||||| ||||| | ||| ||||| |||||||||||| ||| |||||    
T  1461 tttaaaaaagaaaagtaagtcctctcatcctttctcttcctaaaccctcaatccaaaca 1403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 15420 - 15314
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    ||||||| || ||||||||||| | |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||  || ||| || |||||||    
T  15420 tttaaaaggtcaacatattaacgtgataaacaatcatataatacttcaaccacacttaatttattttagaaaaacatgttatgtaatccgtagtttaaaa 15321  T
Q  101 aagaaaa 107  Q
    || ||||    
T  15320 aaaaaaa 15314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 18926 - 18821
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaa 100  Q
    ||||| ||||||| |||||||||| ||||| | |||||||||| |||||| |||| | |||||||||||||| |||||||| ||||||  | ||||||||    
T  18926 tttaagaagttaatatattaacatgataaaga-tcatataataattcaatgacacataatttattttagaaagacatgttatatagtctgtcatttaaaa 18828  T
Q  101 aagaaaa 107  Q
    |||||||    
T  18827 aagaaaa 18821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 33 - 142
Target Start/End: Complemental strand, 37508 - 37399
Alignment:
Q  33 atcatataatacttcaatcacacttgatttattttagaaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctc 132  Q
    ||||||||| |||||||  ||||||||||||||||| |||||||| |||||| || | |||||||||||| |||||| |  |||||||| ||||  ||||    
T  37508 atcatataacacttcaaaaacacttgatttattttaaaaaaacattttacattgttcgtaatttaaaaaataaaagtgagccctccccttccttgccctc 37409  T
Q  133 ctaaaccctc 142  Q
    ||||| ||||    
T  37408 ctaaatcctc 37399  T

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Target: scaffold0119; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 151
Target Start/End: Complemental strand, 30841 - 30722
Alignment:
Q  33 atcatataatacttcaatcacacttgatttattttagaaaaa-catgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcccttctcct 131  Q
    ||||||||| |||||||  |||||| |||||||| | ||||| ||| |||||| || | |||||||||||| |||||| |  ||||||||||||| ||||    
T  30841 atcatataacacttcaaaaacacttaatttatttaaaaaaaaacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttgtcct 30742  T
Q  132 cctaaaccctccatcgaaac 151  Q
    |||||| |||| ||| ||||    
T  30741 cctaaatcctcaatccaaac 30722  T

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Target: scaffold0012 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 152
Target Start/End: Original strand, 184779 - 184845
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    |||||||||||||||||||| |||||| |||||| ||||||  |||||||||||||||||| |||||    
T  184779 gtccataatttaaaaaagaatagtaaaccctcccttccctttccctcctaaaccctccatccaaaca 184845  T

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Target: scaffold0012; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 184689 - 184636
Alignment:
Q  70 aaaaacatgttacatagtccataatttaaaaaagaaaagtaaatcctcccctcc 123  Q
    |||||||| ||| ||||| |||||||||||||| |||||| || ||||||||||    
T  184689 aaaaacattttatatagttcataatttaaaaaataaaagtgaaccctcccctcc 184636  T

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Target: scaffold0007 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 86 - 152
Target Start/End: Original strand, 242388 - 242454
Alignment:
Q  86 gtccataatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    |||| |||||||||||||||||||||| |||||||||||||| |||  |||||| |||||| |||||    
T  242388 gtccgtaatttaaaaaagaaaagtaaaccctcccctcccttccccttataaaccatccatccaaaca 242454  T

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Target: scaffold0198 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 152
Target Start/End: Complemental strand, 3214 - 3153
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    ||||||||||||||||||||||  ||||||||||||| |||||||||| ||| ||| |||||    
T  3214 taatttaaaaaagaaaagtaaactctcccctcccttcccctcctaaactctcaatccaaaca 3153  T

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Target: scaffold0240 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 91 - 158
Target Start/End: Original strand, 17717 - 17782
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaacagaccct 158  Q
    |||||||||||||||||||||| ||  ||||||||||  ||||||||||||||||| ||||| |||||    
T  17717 taatttaaaaaagaaaagtaaaccc--ccctcccttccactcctaaaccctccatccaaacacaccct 17782  T

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Target: scaffold0006 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 81498 - 81564
Alignment:
Q  1 tttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttatttt 67  Q
    |||||||| || | ||| |||||| |||||  |||||||||||||||||||| ||||||||||||||    
T  81498 tttaaaaaattgaaataataacatgataaatgatcatataatacttcaatcatacttgatttatttt 81564  T

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Target: scaffold0783 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0783
Description:

Target: scaffold0783; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 5998 - 6063
Alignment:
Q  2 ttaaaaagttaacatattaacataataaacaatcatataatacttcaatcacacttgatttatttt 67  Q
    ||||||| || | ||| |||||| |||||  |||||||||||||| ||||| ||||||||||||||    
T  5998 ttaaaaaattgaaataataacatgataaatgatcatataatacttgaatcatacttgatttatttt 6063  T

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Target: scaffold0027 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 152
Target Start/End: Complemental strand, 122051 - 121991
Alignment:
Q  91 taatttaaaaaagaaaagtaaatcctcccctcccttctcctcctaaaccctccatcgaaaca 152  Q
    |||||| ||||||||||| ||||||||||||| | ||| ||||||||||||| ||| |||||    
T  122051 taattttaaaaagaaaagcaaatcctcccctctc-tcttctcctaaaccctcaatccaaaca 121991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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