View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8580_low_36 (Length: 281)

Name: NF8580_low_36
Description: NF8580
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8580_low_36
NF8580_low_36
[»] chr4 (51 HSPs)
chr4 (1-280)||(1985860-1986150)
chr4 (5-171)||(34844758-34844927)
chr4 (1-171)||(40058852-40059025)
chr4 (1-171)||(27528795-27528968)
chr4 (5-170)||(52983647-52983815)
chr4 (1-169)||(20077986-20078157)
chr4 (1-171)||(46714416-46714590)
chr4 (1-171)||(19660532-19660705)
chr4 (1-171)||(32986221-32986394)
chr4 (1-174)||(33696276-33696452)
chr4 (1-174)||(35229192-35229368)
chr4 (1-171)||(5609202-5609375)
chr4 (1-174)||(20566373-20566550)
chr4 (1-123)||(33992650-33992773)
chr4 (1-157)||(49287882-49288039)
chr4 (1-171)||(44343538-44343711)
chr4 (1-171)||(45787704-45787876)
chr4 (1-156)||(54127358-54127515)
chr4 (5-134)||(32942398-32942528)
chr4 (1-174)||(25852238-25852415)
chr4 (26-171)||(34723848-34723996)
chr4 (1-171)||(51535637-51535818)
chr4 (1-171)||(7391965-7392136)
chr4 (30-157)||(32990488-32990617)
chr4 (1-174)||(35674746-35674914)
chr4 (1-171)||(12500059-12500231)
chr4 (1-171)||(36131510-36131683)
chr4 (56-174)||(12824480-12824600)
chr4 (28-157)||(9517656-9517787)
chr4 (9-154)||(13584272-13584419)
chr4 (1-83)||(22625160-22625243)
chr4 (5-83)||(43719155-43719234)
chr4 (51-170)||(13550283-13550404)
chr4 (1-125)||(13873343-13873468)
chr4 (97-174)||(4064981-4065060)
chr4 (88-170)||(25969504-25969586)
chr4 (112-173)||(52494624-52494687)
chr4 (56-134)||(53787096-53787175)
chr4 (1-154)||(55961772-55961915)
chr4 (88-171)||(4912038-4912123)
chr4 (1-129)||(18875561-18875689)
chr4 (1-80)||(2351037-2351117)
chr4 (56-129)||(22488072-22488145)
chr4 (106-171)||(9978509-9978576)
chr4 (110-171)||(23131436-23131499)
chr4 (106-171)||(13017843-13017909)
chr4 (106-174)||(33289184-33289254)
chr4 (112-171)||(23639760-23639821)
chr4 (112-171)||(23645418-23645479)
chr4 (1-45)||(12710203-12710247)
chr4 (139-174)||(24672302-24672338)
[»] chr3 (61 HSPs)
chr3 (1-171)||(25289715-25289887)
chr3 (1-174)||(35492935-35493111)
chr3 (1-174)||(39041849-39042025)
chr3 (1-174)||(49258259-49258435)
chr3 (1-171)||(30257648-30257821)
chr3 (1-171)||(30807153-30807326)
chr3 (1-171)||(53424177-53424349)
chr3 (5-174)||(18176884-18177056)
chr3 (1-174)||(21362967-21363143)
chr3 (1-171)||(40133449-40133622)
chr3 (1-171)||(45529755-45529927)
chr3 (1-171)||(53233911-53234083)
chr3 (1-171)||(8456150-8456323)
chr3 (1-171)||(10083819-10083992)
chr3 (1-171)||(26174137-26174310)
chr3 (1-171)||(46576372-46576545)
chr3 (1-170)||(25379785-25379957)
chr3 (1-174)||(52821633-52821808)
chr3 (17-171)||(8097279-8097436)
chr3 (1-171)||(10190742-10190915)
chr3 (5-171)||(15566500-15566668)
chr3 (1-133)||(26108316-26108449)
chr3 (1-171)||(34492575-34492748)
chr3 (1-171)||(40940849-40941022)
chr3 (1-171)||(48977412-48977585)
chr3 (1-154)||(29915288-29915442)
chr3 (1-154)||(29964441-29964595)
chr3 (4-174)||(31537835-31538008)
chr3 (1-171)||(45272416-45272589)
chr3 (1-171)||(32151448-32151621)
chr3 (3-171)||(52455649-52455820)
chr3 (1-171)||(25344058-25344230)
chr3 (6-174)||(1692863-1693033)
chr3 (1-174)||(7485528-7485698)
chr3 (25-174)||(24407309-24407461)
chr3 (88-174)||(33398465-33398553)
chr3 (22-171)||(2511297-2511449)
chr3 (5-174)||(4462661-4462832)
chr3 (88-170)||(48104989-48105073)
chr3 (1-174)||(53288710-53288885)
chr3 (88-171)||(1178284-1178367)
chr3 (70-171)||(24165715-24165817)
chr3 (5-126)||(49167084-49167209)
chr3 (5-134)||(7470255-7470384)
chr3 (9-134)||(51532821-51532947)
chr3 (31-171)||(48972714-48972854)
chr3 (91-174)||(54475796-54475881)
chr3 (1-45)||(9853640-9853684)
chr3 (106-171)||(53848434-53848501)
chr3 (4-73)||(19857078-19857148)
chr3 (107-174)||(25017620-25017688)
chr3 (1-171)||(8958035-8958209)
chr3 (5-82)||(14343379-14343457)
chr3 (5-129)||(26158846-26158964)
chr3 (105-173)||(50731235-50731305)
chr3 (105-173)||(50781549-50781619)
chr3 (88-157)||(55371309-55371379)
chr3 (88-171)||(33698706-33698791)
chr3 (1-46)||(38732990-38733035)
chr3 (112-174)||(4048086-4048150)
chr3 (1-80)||(55287827-55287907)
[»] chr1 (48 HSPs)
chr1 (1-170)||(17935793-17935965)
chr1 (1-171)||(9500355-9500528)
chr1 (1-174)||(24674417-24674593)
chr1 (1-171)||(4621237-4621410)
chr1 (1-171)||(15059402-15059575)
chr1 (1-174)||(24122047-24122223)
chr1 (1-171)||(7766727-7766900)
chr1 (1-134)||(8077671-8077805)
chr1 (1-153)||(8779755-8779909)
chr1 (5-166)||(18646881-18647045)
chr1 (1-171)||(7578433-7578606)
chr1 (1-171)||(27454864-27455039)
chr1 (1-174)||(36155885-36156061)
chr1 (1-170)||(37351454-37351634)
chr1 (1-129)||(46607834-46607963)
chr1 (1-126)||(21726753-21726879)
chr1 (1-171)||(7197247-7197419)
chr1 (1-134)||(30677200-30677334)
chr1 (1-170)||(34778366-34778535)
chr1 (25-171)||(8254752-8254901)
chr1 (1-129)||(33905554-33905683)
chr1 (1-171)||(45859043-45859216)
chr1 (1-171)||(23734140-23734314)
chr1 (1-171)||(23741332-23741506)
chr1 (1-167)||(1378922-1379090)
chr1 (1-152)||(2272368-2272521)
chr1 (1-80)||(46113495-46113575)
chr1 (5-134)||(18533763-18533893)
chr1 (88-171)||(22909983-22910068)
chr1 (1-134)||(23232300-23232438)
chr1 (92-171)||(48699875-48699956)
chr1 (88-174)||(26513145-26513232)
chr1 (1-129)||(32729569-32729697)
chr1 (1-45)||(29057466-29057510)
chr1 (5-83)||(7946872-7946951)
chr1 (89-170)||(36921513-36921596)
chr1 (3-45)||(20487319-20487361)
chr1 (56-174)||(45331618-45331739)
chr1 (1-45)||(25237118-25237162)
chr1 (1-83)||(168225-168308)
chr1 (112-173)||(23041658-23041721)
chr1 (75-129)||(36965295-36965347)
chr1 (97-174)||(47091742-47091821)
chr1 (106-174)||(35138118-35138188)
chr1 (4-45)||(1818761-1818802)
chr1 (1-129)||(32930773-32930902)
chr1 (28-83)||(1486469-1486524)
chr1 (1-45)||(14258556-14258600)
[»] scaffold0070 (1 HSPs)
scaffold0070 (4-171)||(40352-40521)
[»] chr7 (52 HSPs)
chr7 (1-171)||(22119916-22120089)
chr7 (1-171)||(40542910-40543083)
chr7 (1-171)||(7275305-7275478)
chr7 (1-171)||(2751299-2751472)
chr7 (1-171)||(21835179-21835352)
chr7 (5-174)||(17196947-17197119)
chr7 (1-171)||(2103083-2103254)
chr7 (1-171)||(7175862-7176035)
chr7 (1-171)||(11997877-11998050)
chr7 (1-174)||(18044135-18044311)
chr7 (1-171)||(21217833-21218006)
chr7 (1-171)||(27312180-27312353)
chr7 (1-170)||(19421259-19421431)
chr7 (1-171)||(22703514-22703687)
chr7 (1-171)||(23012508-23012681)
chr7 (1-171)||(42913513-42913686)
chr7 (1-171)||(10091216-10091388)
chr7 (15-171)||(654705-654863)
chr7 (1-157)||(17212081-17212239)
chr7 (4-174)||(27009390-27009564)
chr7 (25-171)||(29861722-29861871)
chr7 (28-174)||(41907511-41907659)
chr7 (1-171)||(31197619-31197791)
chr7 (1-171)||(2344327-2344500)
chr7 (13-171)||(16374034-16374195)
chr7 (1-171)||(31273942-31274114)
chr7 (56-174)||(3851841-3851961)
chr7 (5-174)||(36772300-36772471)
chr7 (1-174)||(39145649-39145825)
chr7 (49-171)||(23092173-23092297)
chr7 (5-171)||(28089848-28090020)
chr7 (1-171)||(28646997-28647170)
chr7 (1-101)||(13332495-13332596)
chr7 (88-170)||(22638404-22638488)
chr7 (5-174)||(27704034-27704205)
chr7 (13-174)||(28950911-28951075)
chr7 (9-154)||(9718005-9718152)
chr7 (1-43)||(25333447-25333489)
chr7 (51-170)||(9683905-9684026)
chr7 (1-46)||(23854424-23854469)
chr7 (1-167)||(43785303-43785472)
chr7 (1-45)||(7799961-7800005)
chr7 (87-171)||(31712902-31712988)
chr7 (1-45)||(22299877-22299921)
chr7 (1-170)||(32849619-32849791)
chr7 (86-174)||(25333517-25333606)
chr7 (1-45)||(14199795-14199839)
chr7 (1-80)||(42814892-42814972)
chr7 (51-134)||(21373789-21373872)
chr7 (68-134)||(22643381-22643447)
chr7 (1-45)||(21370625-21370669)
chr7 (1-37)||(31713032-31713068)
[»] chr8 (43 HSPs)
chr8 (1-171)||(4718673-4718846)
chr8 (1-171)||(34237655-34237828)
chr8 (1-174)||(21603258-21603434)
chr8 (1-170)||(28193502-28193674)
chr8 (1-174)||(20469945-20470120)
chr8 (1-171)||(20305936-20306109)
chr8 (1-171)||(21092569-21092742)
chr8 (1-171)||(39349284-39349457)
chr8 (1-171)||(2618214-2618387)
chr8 (1-171)||(3734623-3734796)
chr8 (5-171)||(8765526-8765695)
chr8 (1-170)||(15259407-15259579)
chr8 (1-171)||(14632982-14633155)
chr8 (1-171)||(32879307-32879480)
chr8 (1-171)||(42328033-42328205)
chr8 (1-171)||(19471637-19471811)
chr8 (1-171)||(19542561-19542735)
chr8 (1-171)||(19589961-19590135)
chr8 (1-172)||(42643117-42643291)
chr8 (1-171)||(4698723-4698896)
chr8 (28-174)||(6953005-6953153)
chr8 (1-157)||(27746350-27746508)
chr8 (1-174)||(264397-264572)
chr8 (1-174)||(651349-651524)
chr8 (1-174)||(837084-837259)
chr8 (1-153)||(21667578-21667731)
chr8 (1-174)||(2166727-2166900)
chr8 (88-171)||(2639411-2639496)
chr8 (1-171)||(18532135-18532299)
chr8 (88-171)||(10292170-10292255)
chr8 (1-129)||(28088314-28088443)
chr8 (4-171)||(34610687-34610857)
chr8 (1-156)||(24018410-24018568)
chr8 (5-153)||(28964065-28964214)
chr8 (88-174)||(18128629-18128717)
chr8 (31-174)||(25248407-25248550)
chr8 (64-171)||(9047279-9047387)
chr8 (89-170)||(7557952-7558034)
chr8 (28-129)||(24999289-24999391)
chr8 (49-134)||(36848789-36848873)
chr8 (1-75)||(7558041-7558116)
chr8 (68-153)||(1219445-1219531)
chr8 (1-43)||(8042682-8042724)
[»] chr6 (30 HSPs)
chr6 (1-171)||(11448895-11449068)
chr6 (1-171)||(654146-654319)
chr6 (1-171)||(5360071-5360244)
chr6 (1-171)||(15360098-15360271)
chr6 (1-171)||(21982321-21982493)
chr6 (1-171)||(34147370-34147543)
chr6 (1-171)||(34159986-34160159)
chr6 (1-170)||(9238999-9239171)
chr6 (9-174)||(9690635-9690803)
chr6 (1-171)||(3222636-3222807)
chr6 (1-171)||(21148511-21148683)
chr6 (2-171)||(1344960-1345132)
chr6 (1-171)||(9843962-9844135)
chr6 (3-171)||(14212918-14213079)
chr6 (17-150)||(12390465-12390600)
chr6 (4-171)||(17081054-17081224)
chr6 (1-171)||(11007189-11007362)
chr6 (1-171)||(11840925-11841097)
chr6 (5-171)||(28672095-28672264)
chr6 (1-84)||(33718547-33718631)
chr6 (1-103)||(12591661-12591764)
chr6 (4-82)||(13753267-13753346)
chr6 (89-174)||(15730492-15730579)
chr6 (1-174)||(9208276-9208452)
chr6 (1-45)||(22576091-22576135)
chr6 (1-71)||(17706409-17706480)
chr6 (1-46)||(28968170-28968215)
chr6 (56-136)||(31039100-31039179)
chr6 (112-157)||(27866218-27866264)
chr6 (88-171)||(14504082-14504167)
[»] chr2 (46 HSPs)
chr2 (1-171)||(44946053-44946226)
chr2 (3-171)||(15037985-15038156)
chr2 (1-174)||(17324790-17324964)
chr2 (1-174)||(11941207-11941383)
chr2 (1-171)||(33827573-33827746)
chr2 (1-174)||(30466827-30467003)
chr2 (8-171)||(35171831-35171997)
chr2 (5-174)||(19849861-19850032)
chr2 (1-171)||(34516414-34516581)
chr2 (1-153)||(44976172-44976327)
chr2 (48-171)||(28668945-28669070)
chr2 (12-171)||(36390569-36390730)
chr2 (1-150)||(10582014-10582163)
chr2 (5-134)||(5394045-5394175)
chr2 (1-129)||(4567481-4567610)
chr2 (1-117)||(27290612-27290729)
chr2 (1-174)||(25293190-25293359)
chr2 (1-157)||(36242327-36242485)
chr2 (1-171)||(43374330-43374498)
chr2 (5-171)||(19054053-19054223)
chr2 (1-171)||(24196028-24196199)
chr2 (5-156)||(1191541-1191694)
chr2 (5-171)||(8258925-8259094)
chr2 (1-134)||(41314016-41314149)
chr2 (1-122)||(45271408-45271530)
chr2 (5-171)||(13266518-13266686)
chr2 (56-174)||(714122-714242)
chr2 (1-174)||(41329867-41330042)
chr2 (106-171)||(18692090-18692157)
chr2 (1-75)||(18976524-18976598)
chr2 (96-174)||(44929843-44929923)
chr2 (23-171)||(2140486-2140634)
chr2 (28-134)||(3943791-3943898)
chr2 (1-79)||(32845115-32845194)
chr2 (107-171)||(18976455-18976521)
chr2 (88-157)||(45132399-45132469)
chr2 (9-125)||(23787056-23787173)
chr2 (88-171)||(27269344-27269429)
chr2 (1-45)||(4852582-4852626)
chr2 (6-129)||(5608078-5608202)
chr2 (5-45)||(6714410-6714450)
chr2 (88-171)||(6714295-6714380)
chr2 (112-171)||(39957894-39957955)
chr2 (88-156)||(44610151-44610220)
chr2 (94-153)||(32845194-32845254)
chr2 (1-45)||(40997479-40997523)
[»] chr5 (52 HSPs)
chr5 (1-174)||(6014277-6014453)
chr5 (1-171)||(19456211-19456382)
chr5 (1-171)||(33709503-33709674)
chr5 (1-171)||(8484661-8484834)
chr5 (1-171)||(32059440-32059613)
chr5 (1-171)||(15641106-15641278)
chr5 (1-174)||(11926498-11926675)
chr5 (1-171)||(18207231-18207404)
chr5 (1-171)||(27498731-27498904)
chr5 (1-171)||(38684232-38684404)
chr5 (1-174)||(13038452-13038627)
chr5 (1-174)||(34310166-34310342)
chr5 (1-171)||(30485852-30486025)
chr5 (1-157)||(13108465-13108622)
chr5 (1-171)||(4603801-4603974)
chr5 (1-171)||(31287946-31288119)
chr5 (4-171)||(21236362-21236532)
chr5 (1-171)||(7085626-7085799)
chr5 (1-128)||(25586956-25587085)
chr5 (1-174)||(27487551-27487728)
chr5 (6-166)||(11464913-11465075)
chr5 (1-157)||(42193509-42193665)
chr5 (4-157)||(10399800-10399956)
chr5 (1-174)||(23270519-23270695)
chr5 (51-171)||(35425088-35425210)
chr5 (5-171)||(37495075-37495251)
chr5 (5-171)||(10869565-10869734)
chr5 (1-171)||(12398448-12398621)
chr5 (1-83)||(38631051-38631134)
chr5 (1-157)||(5049161-5049318)
chr5 (1-157)||(36954842-36955000)
chr5 (1-129)||(15931083-15931211)
chr5 (1-129)||(15971166-15971295)
chr5 (95-174)||(22693054-22693135)
chr5 (1-154)||(26009282-26009437)
chr5 (1-174)||(19145409-19145584)
chr5 (56-174)||(9659308-9659428)
chr5 (1-45)||(22392725-22392769)
chr5 (1-174)||(34049846-34050011)
chr5 (1-174)||(25750610-25750784)
chr5 (88-171)||(22392800-22392885)
chr5 (88-171)||(41351104-41351188)
chr5 (5-45)||(1827659-1827699)
chr5 (88-174)||(36895537-36895625)
chr5 (105-171)||(38630979-38631047)
chr5 (1-44)||(5067325-5067368)
chr5 (1-83)||(7151353-7151436)
chr5 (94-174)||(13659242-13659324)
chr5 (88-171)||(8821096-8821181)
chr5 (49-129)||(31206315-31206396)
chr5 (93-125)||(12647829-12647861)
chr5 (88-132)||(23290708-23290752)
[»] scaffold0576 (1 HSPs)
scaffold0576 (1-171)||(5082-5255)
[»] scaffold0217 (1 HSPs)
scaffold0217 (1-174)||(7306-7482)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-171)||(161833-162006)
[»] scaffold0623 (1 HSPs)
scaffold0623 (1-171)||(1057-1229)
[»] scaffold0366 (2 HSPs)
scaffold0366 (1-171)||(9300-9472)
scaffold0366 (1-154)||(12019-12173)
[»] scaffold0459 (1 HSPs)
scaffold0459 (1-171)||(10695-10866)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-174)||(97363-97539)
[»] scaffold0051 (1 HSPs)
scaffold0051 (1-171)||(52871-53044)
[»] scaffold0717 (1 HSPs)
scaffold0717 (5-129)||(2-127)
[»] scaffold0068 (1 HSPs)
scaffold0068 (1-171)||(41645-41817)
[»] scaffold0102 (1 HSPs)
scaffold0102 (16-171)||(39131-39289)
[»] scaffold0328 (1 HSPs)
scaffold0328 (2-157)||(15016-15172)
[»] scaffold0157 (1 HSPs)
scaffold0157 (1-171)||(20246-20418)
[»] scaffold0049 (1 HSPs)
scaffold0049 (1-174)||(66786-66954)
[»] scaffold0016 (1 HSPs)
scaffold0016 (31-171)||(32342-32484)
[»] scaffold1175 (1 HSPs)
scaffold1175 (68-174)||(2423-2531)
[»] scaffold0199 (2 HSPs)
scaffold0199 (1-44)||(8537-8580)
scaffold0199 (112-171)||(8451-8512)
[»] scaffold0460 (1 HSPs)
scaffold0460 (3-45)||(8308-8350)
[»] scaffold0240 (1 HSPs)
scaffold0240 (1-44)||(12884-12927)


Alignment Details
Target: chr4 (Bit Score: 202; Significance: 1e-110; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 280
Target Start/End: Original strand, 1985860 - 1986150
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattct-tttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1985860 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttggtgcgaatttcgatgggctaagtccatacagagtaaactctggctttaa 1985959  T
Q  100 acggagcccccacaagtgggcggtgggattagtccatcgaattagtcgattcttggatggataccgagtttta-aagacaccaataatgaactttatttt 198  Q
    |||||||||||||||||||||||||| ||| ||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  1985960 acggagcccccacaagtgggcggtggaattggtctatcggattagtcgattcttggatggataccgagttttataagacaccaataatgaactttatttt 1986059  T
Q  199 gtcg-gtgtgtagaaataatttgcttacgtttaattcatttaggt--------atgaaaatttaaagacatgttctccaaataaacccttg 280  Q
    |||| |||||||||||||||||||||| |||||||||||||||||        ||||||||||||||||||||| ||||||||||||||||    
T  1986060 gtcgtgtgtgtagaaataatttgcttatgtttaattcatttaggtatgtattcatgaaaatttaaagacatgttttccaaataaacccttg 1986150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 5 - 171
Target Start/End: Complemental strand, 34844927 - 34844758
Alignment:
Q  5 gatcttggagtttgcttctccagaggtctcaggttcgattct-tttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacgg 103  Q
    |||||||||||||||| ||||||||||||||||||||||||| | |||||| ||||||| ||| ||||||||||||||||    ||||||||||||||||    
T  34844927 gatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacgg 34844828  T
Q  104 agcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
     |||||| |||||||||||||||||| || || ||| |||||||||||||||||| ||||||||||||||    
T  34844827 ggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 34844758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 40059025 - 40058852
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattct-tttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||| | |||||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  40059025 ttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 40058926  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| |||||| |||||||||||||||||| || || ||| |||||||||||||||||| ||||||||||||||    
T  40058925 acggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 40058852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 27528968 - 27528795
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | | |||||| ||||||| ||| ||||||||||||||||    |||||||||||     
T  27528968 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttat 27528869  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| |||||| ||||||||||||| |||| || || ||| |||||||||||||||||| ||||||||||||||    
T  27528868 acggggcccccgcaagtgggcggtgagattggtcccctcggattagtcgattcttggatcggataccgagtttt 27528795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 5 - 170
Target Start/End: Original strand, 52983647 - 52983815
Alignment:
Q  5 gatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacgg 103  Q
    |||||||||||||||| ||||||||||||||||||||||| | | |||||| ||||||  ||| ||||||||||||||||    ||||||||||||||||    
T  52983647 gatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcagtgggctaagtccatacagagcttgctctggctttaaacgg 52983746  T
Q  104 agcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagttt 170  Q
     |||||| |||||||||||||||||| || || ||| |||||||||||||||||| |||||||||||||    
T  52983747 ggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 52983815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 20078157 - 20077986
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| |||||||||||||||||| |||||    |||||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  20078157 ttgggatcttggagtttgctcctccagaggtctcaggtttgattcccactggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 20078058  T
Q  100 acggagcccccacaagtgggcggtgggattag-tccatcgaattagtcgattcttggat-ggataccgagtt 169  Q
    |||| ||||||  ||||||||||||||||||| ||| ||| |||||||||||||||||| ||||||||||||    
T  20078057 acggggcccccgtaagtgggcggtgggattagttccctcggattagtcgattcttggatcggataccgagtt 20077986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 46714416 - 46714590
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt--cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggcttta 98  Q
    |||||||||||||||||||| |||||||||||||||||||||||  | |||||||| ||||||| ||| ||||||||||||||||    | || ||||||    
T  46714416 ttgggatcttggagtttgctcctccagaggtctcaggttcgatttccctttggtgccaatttcggtgggctaagtccatacagagcttgcccttgcttta 46714515  T
Q  99 aacggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    ||||| |||||| |||||||||||||||||| || || ||| ||||||| ||||||| || ||||||||||||||    
T  46714516 aacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcaattcttgaatcggataccgagtttt 46714590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 19660705 - 19660532
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattct-tttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| |||||||||||||||||| |||||| | || ||| ||||||| |||  |||||||||||||||    ||||||||||||    
T  19660705 ttgggatcttggagtttgctcctccagaggtctcaggtttgattctctctgatgcaaatttcggtgggataagtccatacagagcttgctctggctttaa 19660606  T
Q  100 acggagcccccacaagtgggcggtgggatt-agtccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    || | |||||| |||||||||||||||||| |  || ||| |||||||||||||||||| ||||||||||||||    
T  19660605 acagggcccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggatcggataccgagtttt 19660532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 32986221 - 32986394
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||| ||| | | |||||| ||||||| ||| ||||||||||||||||    ||||| ||||||    
T  32986221 ttgggatcttggagtttgctcctccagaggtctcaggttcaattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctgactttaa 32986320  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    | || |||||| |||||||||||||||||| || || ||| | |||||||||||||||| ||||||||||||||    
T  32986321 atggggcccccgcaagtgggcggtgggattggtcccctcggaatagtcgattcttggatcggataccgagtttt 32986394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 33696452 - 33696276
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||| ||| | | |||||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  33696452 ttgggatcttggagtttgctcctccagaggtctcaggttcaattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 33696353  T
Q  100 acggagcccccacaagtgggcggtgggattagtcc-atcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    | || |||||| ||||||||||||| |||| ||||  ||| ||||||| |||||||||| ||||| |||||||||||    
T  33696352 atggggcccccgcaagtgggcggtgagattggtcctctcggattagtcaattcttggatcggatatcgagttttaaa 33696276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 35229192 - 35229368
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaa 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||   ||| ||||||| ||| ||||||||||||| ||    ||||| |||||||    
T  35229192 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccttctatgccaatttcggtgggctaagtccatacatagcttgctctgactttaaa 35229291  T
Q  101 c-ggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    | ||  |||||||||||| ||||||||||| || || |||||||||||||||||||||| ||||||||| |||||||    
T  35229292 cgggtccccccacaagtgagcggtgggattggtcccctcgaattagtcgattcttggatcggataccgaattttaaa 35229368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 5609375 - 5609202
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattct-tttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    ||||||||||||||||||||  | ||| |||||||||||||||||| | |||||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  5609375 ttgggatcttggagtttgctcattcagtggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 5609276  T
Q  100 acggagcccccacaagtgggcggtgggatt-agtccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    | || |||||| ||||||| |||||||||| |  || ||| |||||||||||||||||| ||||||||||||||    
T  5609275 atggggcccccgcaagtggacggtgggattgatcccctcggattagtcgattcttggatcggataccgagtttt 5609202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 20566373 - 20566550
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtc-tcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggcttta 98  Q
    |||||||||||||||||||| ||||||||||  |||||||||||||  | |||||| ||||||| ||| | ||||||||||||||    |||||||||||    
T  20566373 ttgggatcttggagtttgctcctccagaggtgatcaggttcgattccctctggtgccaatttcggtgggcaaagtccatacagagcttgctctggcttta 20566472  T
Q  99 aacggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    |||||||||||| |||||||||| ||||||| || || ||  |||||||||||||||||| ||||| |||||||||||    
T  20566473 aacggagcccccgcaagtgggcgctgggattggtcccctcagattagtcgattcttggatcggatatcgagttttaaa 20566550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 33992650 - 33992773
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattct-tttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| |||||||||||| |||||||||||| | |||||| ||||||| ||| ||||||||||||| ||    ||||||||||||    
T  33992650 ttgggatcttggagtttgctcctccagaggtcttaggttcgattctctctggtgccaatttcggtgggctaagtccatacatagcttgctctggctttaa 33992749  T
Q  100 acggagcccccacaagtgggcggt 123  Q
    |||| |||||| ||||||||||||    
T  33992750 acggggcccccgcaagtgggcggt 33992773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 49287882 - 49288039
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattct-tttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| | |||||| ||||||| ||| ||||||||||||| | |   || |||||||||    
T  49287882 ttgggatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacaaaatttgctatggctttaa 49287981  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat 157  Q
    |||| || ||| |||||||||| || |||| || || ||| ||||||||||||||||||    
T  49287982 acgg-gctcccgcaagtgggcgctgagattggtcccctcggattagtcgattcttggat 49288039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 44343538 - 44343711
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| | ||| ||| |||| |||||||||  | |||||| ||||| | ||| ||||||||||||||||    ||||| ||||||    
T  44343538 ttgggatcttggagtttgctcccccaaaggactcaagttcgattccctctggtgctaattttggtgggctaagtccatacagagcttgctctgactttaa 44343637  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| || ||| |||||||||||||||||| || || ||||||||||||||||||| || ||||||||||||||    
T  44343638 acggggctcccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttgaatcggataccgagtttt 44343711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 45787876 - 45787704
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||| |||||||| |||||| |||||||| |||||||||||||||  | || ||| ||||||  ||| ||||||||||||||||    ||||||||||||    
T  45787876 ttggaatcttgga-tttgctcctccagagatctcaggttcgattccctctgatgccaatttcagtgggctaagtccatacagagcttgctctggctttaa 45787778  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    || | |||||| ||||||| |||||||||| || || |||||||||||||||||||||| ||||||||||||||    
T  45787777 acagggcccccgcaagtggacggtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 45787704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 54127515 - 54127358
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||| ||||||||||||| ||||  | | |||| ||||||| ||| ||||||| ||||||||    ||||||||||||    
T  54127515 ttgggatcttggagtttgctcctccaaaggtctcaggttcaattccctcttgtgccaatttcggtgggctaagtctatacagagcttgctctggctttaa 54127416  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttgga 156  Q
    |||| |||||| |||||||||||||||||| || || ||| |||||||| ||||||||    
T  54127415 acggggcccccgcaagtgggcggtgggattggtcccctcggattagtcggttcttgga 54127358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 5 - 134
Target Start/End: Original strand, 32942398 - 32942528
Alignment:
Q  5 gatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacgg 103  Q
    ||||||||||||| || |||||||||| | |||||||||||| | || ||| ||||||| ||| ||||||||||||||||   |||||||||||||||||    
T  32942398 gatcttggagtttactcctccagaggtttaaggttcgattctctctgatgccaatttcggtgggctaagtccatacagagcttactctggctttaaacgg 32942497  T
Q  104 agcccccacaagtgggcggtgggattagtcc 134  Q
      ||||||||||||| |||||||||| ||||    
T  32942498 cccccccacaagtggacggtgggattggtcc 32942528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 25852238 - 25852415
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggcttt-a 98  Q
    |||||||||||||||||||| ||||| ||||||||||||||||| | | |||||| ||||||| ||| ||||||||||||||||    |||||||||| |    
T  25852238 ttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 25852337  T
Q  99 aacggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttgga-tggataccgagttttaaa 174  Q
    |||||  ||| | |||||||||  ||||||| || || ||| |||||||| ||||||||  |||||||||||||||||    
T  25852338 aacgggaccctcgcaagtgggcaatgggattggtcccctcggattagtcggttcttggaccggataccgagttttaaa 25852415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 26 - 171
Target Start/End: Original strand, 34723848 - 34723996
Alignment:
Q  26 agaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacggagcccccacaagtgggcggtg 124  Q
    ||||| ||||||||||||||  | |||||| ||||||| ||| ||||||||||||| ||    |||||||||||||||| |||||| |||||||| ||||    
T  34723848 agaggcctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacaaagcttgctctggctttaaacggggcccccgcaagtgggtggtg 34723947  T
Q  125 ggattagtcc-atcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    ||||| ||||  ||| |||||||||||||||||| ||||||||||||||    
T  34723948 ggattggtcctctcggattagtcgattcttggatcggataccgagtttt 34723996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 51535637 - 51535818
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaa----gtccatacagagta---aactctg 92  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||  | |||||| ||||| | ||| ||||    ||||||||||||     | |||||    
T  51535637 ttgggatcttggagtttgctcctccacaggtctcaggttcgattccctctggtgccaattttggtgggctaattaagtccatacagagcttgcagctctg 51535736  T
Q  93 gctttaaacggagccccca-caagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    ||||||||||| ||||||| |||||||||||||||||| || || |||||||||||||||||| ||| ||||||||| ||||    
T  51535737 gctttaaacggggcccccagcaagtgggcggtgggattggtcccctcgaattagtcgattcttagatcggataccgaatttt 51535818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 7392136 - 7391965
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||| ||||||||||||||||| | | |||||| ||||||| |||  ||||||||||||||||   ||||||||||||    
T  7392136 ttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctatggtgccaatttcggtgg-ttaagtccatacagagtttgctctggctttaa 7392038  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttgga-tggataccgagtttt 171  Q
    | ||  ||||||  ||||||||||||||||  | || ||| |||||||| ||||| || |||||||||||||||    
T  7392037 atgggaccccca-tagtgggcggtgggattgttcccctcggattagtcggttcttcgattggataccgagtttt 7391965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 30 - 157
Target Start/End: Original strand, 32990488 - 32990617
Alignment:
Q  30 gtctcaggttcgattct-tttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacggagcccccacaagtgggcggtgggat 128  Q
    ||||||||||||||||  ||| |||| ||||||| ||| ||||||||||||||||    |||||||||||||||| |||||| |||||||||||||||||    
T  32990488 gtctcaggttcgattccctttagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggat 32990587  T
Q  129 tagt-ccatcgaattagtcgattcttggat 157  Q
    | || || ||| | ||||||||||||||||    
T  32990588 tggtcccctcggactagtcgattcttggat 32990617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 35674914 - 35674746
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    ||||||||||||||||||||  |||| ||||| ||||||||||| | | ||| || ||||||| ||| ||||||||||||||||    ||||| ||||||    
T  35674914 ttgggatcttggagtttgctcttccaaaggtcacaggttcgattccctctggagccaatttcggtgggctaagtccatacagagcttgctctgcctttaa 35674815  T
Q  100 acggagcccccacaagtgggcggtgggattagtccatcgaattagtcgattcttggatggataccgagttttaaa 174  Q
    |||| |||||| |||||||||||| ||||       ||| |||||||||||||||   |||||||||||||||||    
T  35674814 acggggcccccgcaagtgggcggttggat------ctcggattagtcgattcttgatcggataccgagttttaaa 35674746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 12500231 - 12500059
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| || || |||||||||||| |||| | | |||||| |||||| |||| ||||||||||||| ||    ||||||||||||    
T  12500231 ttgggatcttggagtttgctccttcaaaggtctcaggtttgattccctctggtgccaatttcaatgggctaagtccatacatagcttgctctggctttaa 12500132  T
Q  100 acggagcccccacaagtgggcggtgggattagtccatcgaattagtcgattcttgga-tggataccgagtttt 171  Q
    ||||  ||||| ||||||||||||   |||  ||  ||| ||||||| |||||||||  ||||||||||||||    
T  12500131 acgggacccccgcaagtgggcggtaaaattgatctctcggattagtcaattcttggaccggataccgagtttt 12500059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 36131683 - 36131510
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    ||||||| |||||||| | | ||||||| ||||||||||||||| | | |||||| ||||||| ||| ||||||||||||||||    || || ||||||    
T  36131683 ttgggattttggagttcgttcctccagatgtctcaggttcgattccctatggtgccaatttcggtggcctaagtccatacagagcttgctatgactttaa 36131584  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    ||||  |||||  ||||||||||||||||| || || ||| ||||||||||| || |||  |||||||||||||    
T  36131583 acgggacccccgtaagtgggcggtgggattggtcccctcggattagtcgattattagatcagataccgagtttt 36131510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 174
Target Start/End: Original strand, 12824480 - 12824600
Alignment:
Q  56 aatttcgatggactaagtccatacagagtaaactctggctttaaacggagcccccacaagtgggcggtgggattagtc-catcgaattagtcgattcttg 154  Q
    ||||| ||||| |||||| |||| |||||   |||| |||||||| ||||| ||  ||||||| |||||||||| ||| |||||||||||||||||||||    
T  12824480 aattttgatgggctaagttcatatagagtttgctctagctttaaatggagctcctgcaagtggacggtgggattggtctcatcgaattagtcgattcttg 12824579  T
Q  155 gat-ggataccgagttttaaa 174  Q
    ||| |||||| ||||||||||    
T  12824580 gatcggatacggagttttaaa 12824600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 157
Target Start/End: Complemental strand, 9517787 - 9517656
Alignment:
Q  28 aggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacggagcccccacaagtgggcggtggg 126  Q
    ||||||||||||||||||| | |||||| ||||||  ||| ||||||||||||||||    ||||| |||||||||| |||||| || ||||| |||| |    
T  9517787 aggtctcaggttcgattctctctggtgccaatttcagtgggctaagtccatacagagcttgctctgactttaaacggggcccccgcaggtgggtggtgag 9517688  T
Q  127 attagt-ccatcgaattagtcgattcttggat 157  Q
    ||| || || ||| ||||||||||||||||||    
T  9517687 attggtcccctcggattagtcgattcttggat 9517656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 13584419 - 13584272
Alignment:
Q  9 ttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacggagcc 107  Q
    |||||||||||| ||||| | |||||| |||||||||  | |||||  ||||||||||| ||||||||||| ||||    |||||||||||||||| |||    
T  13584419 ttggagtttgctcctccaaaagtctcaagttcgattccctctggtgtcaatttcgatgggctaagtccatagagagcttgctctggctttaaacggggcc 13584320  T
Q  108 cccacaagtgggcggtgggattagtc-catcgaattagtcgattcttg 154  Q
    | ||||| || ||||||| ||| ||| | |||||||||||| ||||||    
T  13584319 ctcacaaatgagcggtggaattggtctcctcgaattagtcggttcttg 13584272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 22625243 - 22625160
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagag 83  Q
    ||||||||||||||||| || ||||||||||||||||||||||| | | ||| || ||||||| ||| ||||||||||||||||    
T  22625243 ttgggatcttggagtttactcctccagaggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatacagag 22625160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 43719234 - 43719155
Alignment:
Q  5 gatcttggagtttgcttctccagaggtctcaggttcgattct-tttggtgcgaatttcgatggactaagtccatacagag 83  Q
    |||||||||||||||| |||||||||| |||||||||||||| | | |||| ||||||| ||| ||||||||||||||||    
T  43719234 gatcttggagtttgctcctccagaggtttcaggttcgattctctctagtgctaatttcggtgggctaagtccatacagag 43719155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 51 - 170
Target Start/End: Original strand, 13550283 - 13550404
Alignment:
Q  51 gtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgat 149  Q
    |||| ||||||| ||| |||||||||||| |||   ||||||||||||||||| | ||||||||||||||||| ||||  || || ||| |||| |||||    
T  13550283 gtgccaatttcggtgggctaagtccataccgagcttactctggctttaaacggggtccccacaagtgggcggtaggataggtcccctcggattaatcgat 13550382  T
Q  150 tcttggatgga-taccgagttt 170  Q
    |||||||| || ||||||||||    
T  13550383 tcttggatcgattaccgagttt 13550404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 13873468 - 13873343
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| || || ||||||||||||||||| | | |||||| ||||||| | | |||||| ||||||||||   |||| |||| ||    
T  13873468 ttgggatcttggagtttgctccttcaaaggtctcaggttcgattccctctggtgccaatttcggtaggctaagttcatacagagtttgctctagcttcaa 13873369  T
Q  100 acggagcccccacaagtgggcggtgg 125  Q
    || | |||||| |||||||| |||||    
T  13873368 acagggcccccgcaagtgggtggtgg 13873343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 174
Target Start/End: Original strand, 4064981 - 4065060
Alignment:
Q  97 taaacggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    ||||||||||||||||||||||||||||||||| || || ||| ||||||||||| |||||| ||||| ||| |||||||    
T  4064981 taaacggagcccccacaagtgggcggtgggattggtcccctcggattagtcgatttttggatcggatatcgaattttaaa 4065060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 170
Target Start/End: Complemental strand, 25969586 - 25969504
Alignment:
Q  88 ctctggctttaaacggagcccccacaagtgggcggtgggattagtccatcgaattagtcgattcttggat-ggataccgagttt 170  Q
    |||||||||||||||| ||||||  ||||| ||||||||||| |||| ||||||||||||||||||| || |||||| ||||||    
T  25969586 ctctggctttaaacgg-gcccccgtaagtgagcggtgggattggtccctcgaattagtcgattcttgaatcggatactgagttt 25969504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 173
Target Start/End: Original strand, 52494624 - 52494687
Alignment:
Q  112 caagtgggcggtgggattagtcca-tcgaattagtcgattcttggat-ggataccgagttttaa 173  Q
    |||||||||||||||||| ||||  |||||||||||||||||||||| ||||||||||||||||    
T  52494624 caagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagttttaa 52494687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 134
Target Start/End: Complemental strand, 53787175 - 53787096
Alignment:
Q  56 aatttcgatggactaagtccatacagag-taaactctggctttaaacggagcccccacaagtgggcggtgggattagtcc 134  Q
    ||||||| ||| |||||||||| | ||| ||  ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  53787175 aatttcggtgggctaagtccatgcggagctatgctctggctttaaacggagcccccgcaaatgggcggtgggattagtcc 53787096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 55961915 - 55961772
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaa 100  Q
    |||||||||||||||||||| ||||||||||||          || | |||||| ||||||| ||| ||||||||||||||||    ||||| |||||||    
T  55961915 ttgggatcttggagtttgctcctccagaggtct----------tcctctggtgccaatttcggtgggctaagtccatacagagcttgctctgactttaaa 55961826  T
Q  101 cggagcccccacaagtgggcggtgggattag-tccatcgaattagtcgattcttg 154  Q
    ||| ||||| ||||||||||||||||||| | ||| ||| |||| ||||||||||    
T  55961825 cggggcccc-acaagtgggcggtgggattggttccttcggattaatcgattcttg 55961772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 171
Target Start/End: Original strand, 4912038 - 4912123
Alignment:
Q  88 ctctggctttaaacggagcccccacaagtgggcggtgggatt-agtccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    ||||||||||||||||||||||| |||||||| |||| |||| |  ||  |||||||||||||||||||||  |||||||||||||    
T  4912038 ctctggctttaaacggagcccccgcaagtgggtggtgtgattgatccccccgaattagtcgattcttggatcagataccgagtttt 4912123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 18875689 - 18875561
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    ||||||| || ||||||| |||| || || |||||||||||||||  | || ||  ||||||| ||| ||||||||||||||||    ||||||||||||    
T  18875689 ttgggattttagagtttgtttcttcaaagatctcaggttcgattccctctgatgtcaatttcggtgggctaagtccatacagagcttgctctggctttaa 18875590  T
Q  100 acggagcccccacaagtgggcggtgggatt 129  Q
    |||| |||||||||||||||  ||||||||    
T  18875589 acgg-gcccccacaagtgggtagtgggatt 18875561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 2351037 - 2351117
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccataca 80  Q
    |||| |||||| |||||||| ||||||||||||||||||||||| | | |||||| ||||||| | |||||| ||||||||    
T  2351037 ttggaatcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtcgactaaatccataca 2351117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 22488145 - 22488072
Alignment:
Q  56 aatttcgatggactaagtccatacagagtaaactctggctttaaacggagcccccacaagtgggcggtgggatt 129  Q
    ||||||| ||||||||||||||| ||||     ||||||||||||||| |||||| ||| ||||||||||||||    
T  22488145 aatttcggtggactaagtccatatagagcttgttctggctttaaacggggcccccgcaaatgggcggtgggatt 22488072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 171
Target Start/End: Complemental strand, 9978576 - 9978509
Alignment:
Q  106 cccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    ||||| |||||||||||||||||| || |||||| |||||| ||||||| ||| ||||||||||||||    
T  9978576 cccccgcaagtgggcggtgggattggtcccatcggattagttgattcttagatcggataccgagtttt 9978509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 171
Target Start/End: Complemental strand, 23131499 - 23131436
Alignment:
Q  110 cacaagtgggcggtgggattagtcca-tcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||||||||||||| ||||| ||||  |||||||||||||||||| ||| ||||||||||||||    
T  23131499 cacaagtgggcggtaggattggtcccctcgaattagtcgattcttcgatcggataccgagtttt 23131436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 171
Target Start/End: Original strand, 13017843 - 13017909
Alignment:
Q  106 cccccacaagtgggcggtgggattagtcca-tcgaattagtcgattcttggatggataccgagtttt 171  Q
    ||||| ||||||||| |||||||| ||||| ||| |||||||| | ||||||| |||||||||||||    
T  13017843 cccccgcaagtgggcagtgggattggtccactcggattagtcggtccttggatcgataccgagtttt 13017909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 33289184 - 33289254
Alignment:
Q  106 cccccacaagtgggcggtgggattagtcca-tcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    |||| |||||||| ||||| |||||||||  ||| |||||||||||||||||| |||||||| ||||||||    
T  33289184 cccctacaagtggacggtgagattagtcccctcggattagtcgattcttggatcggataccgggttttaaa 33289254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 171
Target Start/End: Original strand, 23639760 - 23639821
Alignment:
Q  112 caagtgggcggtgggattagtcca-tcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    ||||||| |||||||||| ||||  ||| |||||||||||||||||| ||||||||||||||    
T  23639760 caagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 23639821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 171
Target Start/End: Original strand, 23645418 - 23645479
Alignment:
Q  112 caagtgggcggtgggattagtcca-tcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    ||||||| |||||||||| ||||  ||| |||||||||||||||||| ||||||||||||||    
T  23645418 caagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 23645479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 12710203 - 12710247
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattc 45  Q
    ||||||||||||||| ||||||||   ||||||||||||||||||    
T  12710203 ttgggatcttggagtatgcttctcttaaggtctcaggttcgattc 12710247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 174
Target Start/End: Complemental strand, 24672338 - 24672302
Alignment:
Q  139 aattagtcgattcttggat-ggataccgagttttaaa 174  Q
    ||||||||||||||||||| |||||||||||||||||    
T  24672338 aattagtcgattcttggatcggataccgagttttaaa 24672302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 97; Significance: 1e-47; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 25289887 - 25289715
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||||  | | |||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  25289887 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 25289788  T
Q  100 acggagcccccacaagtgggcggtgggattagtccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| |||||| |||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||    
T  25289787 acggggcccccgcaagtgggcggtgggattggtccctcgaattagtcgattcttggatcggataccgagtttt 25289715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 35492935 - 35493111
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | | |||||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  35492935 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 35493034  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttgga-tggataccgagttttaaa 174  Q
    |||| |||||| |||||||||||||||||| || || ||| ||||||||||||||||| || |||||||||||||||    
T  35493035 acggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggattgaataccgagttttaaa 35493111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 39042025 - 39041849
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattct-tttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| |||||||||||||| |||||||||| | |||||| ||||||| ||| |||||||||| |||||    ||||||||||||    
T  39042025 ttgggatcttggagtttgctcctccagaggtctcaagttcgattctctctggtgccaatttcggtgggctaagtccatgcagagcttgctctggctttaa 39041926  T
Q  100 acggagcccccacaagtgggcggtgggattagtcca-tcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    |||| |||||| |||||||| ||||||||| ||||| ||| |||||||||||||||||| |||||||||||||||||    
T  39041925 acggggcccccgcaagtgggtggtgggattggtccactcggattagtcgattcttggatcggataccgagttttaaa 39041849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 49258435 - 49258259
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||  | | |||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  49258435 ttgggatcttgcagtttgctcctccagaggtctcaggttcgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 49258336  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    |||| ||||||||||||||||||||||||| || || ||| |||||||||||||||||| |||||||||||||||||    
T  49258335 acggggcccccacaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttaaa 49258259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 30257648 - 30257821
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||| ||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||    ||||||||||||    
T  30257648 ttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctttggtgccaatttcgatggactaagtccatacagagcttgctctggctttaa 30257747  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    | || |||||| |||||||||||||| ||| || || ||| |||||||||||||||||| ||||||||| ||||    
T  30257748 atggggcccccgcaagtgggcggtggcattggtcccctcggattagtcgattcttggatcggataccgaatttt 30257821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 30807326 - 30807153
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | | |||||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  30807326 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 30807227  T
Q  100 acggag-cccccacaagtgggcggtgggattagtccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| | ||||| |||||||||||| ||||| |||| ||| |||||||||||||||||| ||||||||||||||    
T  30807226 acggggccccccgcaagtgggcggtaggattggtccctcggattagtcgattcttggatcggataccgagtttt 30807153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 53424349 - 53424177
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | |||||||| ||||||| ||| |||||||||||||||||   || |||||||||    
T  53424349 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttggtgccaatttcggtgggctaagtccatacagagtttgctatggctttaa 53424250  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| |||||| |||||| ||||||||||| || || ||| |||||||||||||||||| ||||||||||||||    
T  53424249 acgg-gcccccgcaagtgagcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 53424177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 174
Target Start/End: Complemental strand, 18177056 - 18176884
Alignment:
Q  5 gatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacgg 103  Q
    ||||||||||||||||  ||||||||| |||||||||||||  | |||||| ||||||| ||||||||||||||||||||    ||||||||||||||||    
T  18177056 gatcttggagtttgctcttccagaggtatcaggttcgattccctctggtgccaatttcggtggactaagtccatacagagcttgctctggctttaaacgg 18176957  T
Q  104 agcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
     |||||| |||||||||||||||||| || |||||| |||||||||||||||||| |||||| ||||||||||    
T  18176956 ggcccccgcaagtgggcggtgggattggtcccatcggattagtcgattcttggatcggatacagagttttaaa 18176884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 21362967 - 21363143
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | | |||||  ||||||| | | ||||||||||||||||    ||||||||||||    
T  21362967 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgtcaatttcggtaggctaagtccatacagagcttgctctggctttaa 21363066  T
Q  100 acggagcccccacaagtgggcggtgggattag-tccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    ||||||||||| |||||||||||||||||| | ||| ||| |||| ||||||||||||| |||||||||||||||||    
T  21363067 acggagcccccgcaagtgggcggtgggattggttccctcggattaatcgattcttggatcggataccgagttttaaa 21363143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 40133622 - 40133449
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    ||||||| |||||||||||| ||||| ||||||||||||||||||  | |||||  ||||||| ||| ||||||||||||||||    ||||||||||||    
T  40133622 ttgggattttggagtttgctcctccaaaggtctcaggttcgattccctctggtgtcaatttcggtgggctaagtccatacagagcttgctctggctttaa 40133523  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| |||||| |||||||||||||||||| || || |||||||||||||||||||||| ||||||||||||||    
T  40133522 acggggcccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 40133449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 45529927 - 45529755
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | | ||| || ||||||||||| ||||||||||||||||    ||||||||||||    
T  45529927 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcgatgggctaagtccatacagagcttgctctggctttaa 45529828  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggatggataccgagtttt 171  Q
    ||||  ||||| |||||||||||||||||| || || ||| |||||||||||||||   ||||||||||||||    
T  45529827 acgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgatcggataccgagtttt 45529755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 53234083 - 53233911
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattct-tttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||| | |||||| ||||||| ||| ||||||||||||||||    |||||||| |||    
T  53234083 ttgggatcttggagtttgctcctccagaagtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctctaa 53233984  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggatggataccgagtttt 171  Q
    |||| |||||| |||||||||||||||||| || || ||| |||||||||||||||   ||||||||||||||    
T  53233983 acggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgatcggataccgagtttt 53233911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 8456323 - 8456150
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||| ||||||||| ||||||||||||||||||||||| | | |||||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  8456323 ttgggatcttcgagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 8456224  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| |||||| ||||||||| |||||||| || || ||| ||||||||||||||| || ||||||||||||||    
T  8456223 acggggcccccgcaagtgggcagtgggattggtcccctcggattagtcgattcttgaatcggataccgagtttt 8456150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 10083992 - 10083819
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||| |||||||| |||||  | | |||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  10083992 ttgggatcttggagtttgctcctccagagggctcaggtttgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 10083893  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| |||||||||||||| |||||||||| || || ||| |||||||||||||||||| ||||||||||||||    
T  10083892 acggggcccccacaagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 10083819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 26174137 - 26174310
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcga-ttcttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||| | |||||| ||||||| |||  |||||||||||||||    ||||||||||||    
T  26174137 ttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctggtgccaatttcggtgggttaagtccatacagagcttgctctggctttaa 26174236  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |  | |||||| |||||||||||||||||| || || ||| |||||||||||||||||| ||||||||||||||    
T  26174237 atagggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 26174310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 46576372 - 46576545
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | | |||||| ||||||  ||| ||||||||||||||||    ||||||||||||    
T  46576372 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcagtgggctaagtccatacagagcttgctctggctttaa 46576471  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| |||||| |||||||||||| ||||| || || | | |||||||||||||||||| ||||||||||||||    
T  46576472 acggggcccccgcaagtgggcggtcggattggtccccttggattagtcgattcttggatcggataccgagtttt 46576545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 25379785 - 25379957
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||| | |||| |||||||  || ||||||||||||||||    ||||||||||||    
T  25379785 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccttctagtgccaatttcggagggctaagtccatacagagcttgctctggctttaa 25379884  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagttt 170  Q
    |||| |||||| |||| ||||||||||||| || || ||| |||||||||||||||||| |||||| ||||||    
T  25379885 acggggcccccgcaagcgggcggtgggattggtcccctcggattagtcgattcttggatcggatactgagttt 25379957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 52821808 - 52821633
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | | |||||| ||||||| ||  ||||||||||||||||    ||||||||||||    
T  52821808 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgagctaagtccatacagagcttgctctggctttaa 52821709  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    |||| | ||||  ||||||||||||||||| || || ||| |||||||||||||||||| |||||||||||||||||    
T  52821708 acgg-ggccccgtaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttaaa 52821633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 171
Target Start/End: Complemental strand, 8097436 - 8097279
Alignment:
Q  17 tgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacggagcccccacaag 115  Q
    |||| ||||||||| ||||||||||||||  | | |||| ||||||||||| |||||||||||||||| |  |||||||||||||||| |||||| ||||    
T  8097436 tgctcctccagaggcctcaggttcgattccctcttgtgctaatttcgatgggctaagtccatacagagcatgctctggctttaaacggggcccccgcaag 8097337  T
Q  116 tgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||||||||||||| || || ||| |||||||||||||||||| ||||||||||||||    
T  8097336 tgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 8097279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 10190915 - 10190742
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||| |||||||| |||| | | | |||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  10190915 ttgggatcttggagtttgctcctccagagggctcaggtttgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 10190816  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| |||||| ||||||| |||||||||| || || ||| |||||||||||||||||| ||||||||||||||    
T  10190815 acggggcccccgcaagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 10190742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 171
Target Start/End: Complemental strand, 15566668 - 15566500
Alignment:
Q  5 gatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacgg 103  Q
    |||||||||||||||| ||||||||||||||||||||||| | | | |||| ||||||| ||| ||||||||||||||||    ||||||||||||||||    
T  15566668 gatcttggagtttgctcctccagaggtctcaggttcgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacgg 15566569  T
Q  104 agcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
     |||||| |||||||||||||||||| || || ||  |||||||||||||||||| ||||||||||||||    
T  15566568 -gcccccgcaagtgggcggtgggattggtcccctcagattagtcgattcttggatcggataccgagtttt 15566500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 26108316 - 26108449
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | | |||||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  26108316 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 26108415  T
Q  100 acggagcccccacaagtgggcggtgggattagtc 133  Q
    |||| |||||| ||||||||| ||||||||||||    
T  26108416 acggggcccccgcaagtgggctgtgggattagtc 26108449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 34492748 - 34492575
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| |||||||||||||| |||||||||  | || ||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  34492748 ttgggatcttggagtttgctcctccagaggtctcatgttcgattccctctgctgccaatttcgttgggctaagtccatacagagcttgctctggctttaa 34492649  T
Q  100 acggagcccccacaagtgggcggtgggattagtcca-tcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| |||||| |||||||||||||||||| ||||| ||  |||||| |||||||||||  |||||||||||||    
T  34492648 acggggcccccgcaagtgggcggtgggattggtccattcagattagttgattcttggatctgataccgagtttt 34492575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 40940849 - 40941022
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | | |||||| ||||||| ||||||||||||||||||||    ||||| ||||||    
T  40940849 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtggactaagtccatacagagcttgctctgactttaa 40940948  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| ||||||||||||||| ||| ||||| || || |||||||| || ||||||| ||  |||||||||||||    
T  40940949 acggggcccccacaagtgggtggtaggattggtcccctcgaattactcaattcttgaatcagataccgagtttt 40941022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 48977412 - 48977585
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||| ||||||||||||||||| ||| |||||| ||||||| |||  |||||||||||||||    ||||||||||||    
T  48977412 ttgggatcttggagtttgctcctccaaaggtctcaggttcgattccttctggtgccaatttcggtgggttaagtccatacagagcttgctctggctttaa 48977511  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| |||||  |||||||||||||||||| || || ||| |||||||| | ||||||| ||||||||||||||    
T  48977512 acggggcccctgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagtttt 48977585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 29915442 - 29915288
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcga-ttcttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||| |||||| | ||||| ||| |||||| |||||||||    | ||||||||||    
T  29915442 ttgggatcttggagtttgctcctccagaggtctcaggttcgatttcttctggtgccattttcggtgggctaagtacatacagagcttgccctggctttaa 29915343  T
Q  100 acggagcccccacaagtgggcggtgggatt-agtccatcgaattagtcgattcttg 154  Q
    |||| |||||| |||||||||||||||||| |  ||||||||||||||||||||||    
T  29915342 acgg-gcccccgcaagtgggcggtgggattgatcccatcgaattagtcgattcttg 29915288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 29964595 - 29964441
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcga-ttcttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||| |||||| | ||||| ||| |||||| |||||||||    | ||||||||||    
T  29964595 ttgggatcttggagtttgctcctccagaggtctcaggttcgatttcttctggtgccattttcggtgggctaagtacatacagagcttgccctggctttaa 29964496  T
Q  100 acggagcccccacaagtgggcggtgggatt-agtccatcgaattagtcgattcttg 154  Q
    |||| |||||| |||||||||||||||||| |  ||||||||||||||||||||||    
T  29964495 acgg-gcccccgcaagtgggcggtgggattgatcccatcgaattagtcgattcttg 29964441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 31538008 - 31537835
Alignment:
Q  4 ggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacg 102  Q
    ||||||||||||||||| |||||||||||||| ||| |||||  | |||||| ||||| | ||| ||||||| ||||||||   ||||||||||||||||    
T  31538008 ggatcttggagtttgctcctccagaggtctcatgtttgattccctctggtgccaattttggtgggctaagtctatacagagcttactctggctttaaacg 31537909  T
Q  103 gagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    |||||||  ||||||||||||| |||| || || ||||||||||| |||||||||| ||||| |||||||||||    
T  31537908 gagcccctgcaagtgggcggtgagattggtcccctcgaattagtcaattcttggatcggatatcgagttttaaa 31537835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 45272589 - 45272416
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||| ||||||| ||||||||  | |||||| ||||||| ||| |||||||||||| |||    ||||||||||||    
T  45272589 ttgggatcttggagtttgctcctccagatgtctcagtttcgattccctctggtgccaatttcggtgggctaagtccatacggagcttgctctggctttaa 45272490  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| |||||| |||||||||||||||||| || || ||| |||||| || |||||||| ||||||||||||||    
T  45272489 acggggcccccgcaagtgggcggtgggattggtcccctcggattagttgactcttggatcggataccgagtttt 45272416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 32151448 - 32151621
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||| |||| |||  ||||||||| | | |||| ||||||| ||| |||||  |||||||||    ||||||||||||    
T  32151448 ttgggatcttggagtttgctcctccaaaggtttcaaattcgattctctctagtgccaatttcggtgggctaagctcatacagagcttgctctggctttaa 32151547  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| |||||| ||||||||||||| |||| || || |||||||||||||||||||||| ||||||||||||||    
T  32151548 acggggcccccgcaagtgggcggtgagattggtcccctcgaattagtcgattcttggatcggataccgagtttt 32151621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 171
Target Start/End: Complemental strand, 52455820 - 52455649
Alignment:
Q  3 gggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaac 101  Q
    |||||||||||||||||| ||||||||||||||||||||||| | | |||||| ||||| ||||| ||||||| | ||||||    ||||| ||||||||    
T  52455820 gggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaattttgatgggctaagtctacacagagcttgctctgactttaaac 52455721  T
Q  102 ggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttgga-tggataccgagtttt 171  Q
    || |||||| ||||||   ||||||||| || || ||| ||||||||||||||||| |||||||||||||||    
T  52455720 ggggcccccgcaagtgactggtgggattggtcccctcggattagtcgattcttggattggataccgagtttt 52455649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 25344230 - 25344058
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattct-tttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||| ||||||||| |||||||| ||||||||| |||||  |||||||  |||||   ||| |||||||||||||||||   ||||||||||||    
T  25344230 ttgggatcttcgagtttgctcctccagagatctcaggtttgattccctttggtgtcaatttttgtggtctaagtccatacagagtttgctctggctttaa 25344131  T
Q  100 acggagcccccacaagtgggcggtgggattagtccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| |||||| | |||||||| ||||||| || | ||| |||||||||||||| ||| | ||||||||||||    
T  25344130 acggggcccccgctagtgggcgatgggattggttcctcggattagtcgattcttagatcgaataccgagtttt 25344058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 174
Target Start/End: Original strand, 1692863 - 1693033
Alignment:
Q  6 atcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacgga 104  Q
    ||||||||||||||| ||||||||||||||||||||||| | ||| |||  ||||||| ||||||||||| |||||||     ||||||||||| || |     
T  1692863 atcttggagtttgctcctccagaggtctcaggttcgattccatttagtgtcaatttcggtggactaagtctatacagaacttgctctggctttagacag- 1692961  T
Q  105 gcccccacaagtgggcggtgggattag-tccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    |||||| |||||||||||||||||| |  || ||  ||||||||||||||| || |||||||||||||||||    
T  1692962 gcccccgcaagtgggcggtgggatttgccccctcagattagtcgattcttgaatcggataccgagttttaaa 1693033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 7485698 - 7485528
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||  | || ||| ||||||| ||| |||||| ||||  |  | |  |||||||||||    
T  7485698 ttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctgatgccaatttcggtgggctaagttcata--gcttga--tctggctttaa 7485603  T
Q  100 acggagcccccacaagtgggcggtgggattagtccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    || | |||||  ||||||| |||||||||| |||| ||| |||||||||||||||||| |||||||||||||||||    
T  7485602 acag-gcccctgcaagtggccggtgggattggtccctcggattagtcgattcttggatcggataccgagttttaaa 7485528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 174
Target Start/End: Original strand, 24407309 - 24407461
Alignment:
Q  25 cagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacggagcccccacaagtgggcggt 123  Q
    |||||||||||| ||||||||| | |||||| ||||||| |||  |||||  ||||||| |   ||||| |||||||||| |||  | ||||||||||||    
T  24407309 cagaggtctcagattcgattctctctggtgctaatttcggtgggttaagtatatacagaatttgctctgactttaaacggggccatcgcaagtgggcggt 24407408  T
Q  124 gggattagt-ccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    |||||| || || ||| |||||||||||||||||| |||||||||||||||||    
T  24407409 gggattggtcccctcggattagtcgattcttggatcggataccgagttttaaa 24407461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 88 - 174
Target Start/End: Complemental strand, 33398553 - 33398465
Alignment:
Q  88 ctctggctttaaacggagcccccacaagtgggcggtgggattag-tccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    |||| ||||||||||| |||||| |||||||||||||||||| | ||| |||||||||||||||||||||| ||||||||| |||||||    
T  33398553 ctctagctttaaacggggcccccgcaagtgggcggtgggattggttccctcgaattagtcgattcttggatcggataccgaattttaaa 33398465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 171
Target Start/End: Complemental strand, 2511449 - 2511297
Alignment:
Q  22 ctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacggagcccccacaagtgggc 120  Q
    ||||| ||||||||||||||||||  | |||||| ||||||| ||| |||||| |||||||||    ||||| ||||||||||  || || |||||||||    
T  2511449 ctccataggtctcaggttcgattccctctggtgccaatttcggtgggctaagttcatacagagctcgctctgactttaaacgggacctccgcaagtgggc 2511350  T
Q  121 ggtgggattagtc-catcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    ||||||||| ||| | |||||||||| |||||||| || ||||||| ||||||    
T  2511349 ggtgggattggtctcctcgaattagtagattcttgaatcggataccaagtttt 2511297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 174
Target Start/End: Original strand, 4462661 - 4462832
Alignment:
Q  5 gatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacgg 103  Q
    |||||||||||||||| || || | |||||| |||||||||  | |||  | ||||||||||| |||||| |||||||||   ||||| |||||||||||    
T  4462661 gatcttggagtttgctacttcaaaagtctcatgttcgattccctctggcaccaatttcgatgggctaagttcatacagagcttactctagctttaaacgg 4462760  T
Q  104 agcccccacaagtgggcggtgggattagtcca-tcgaattagtcgattcttgga-tggataccgagttttaaa 174  Q
     | |||| ||||||| ||||||||||  |||| ||| ||||||  ||||||||| ||||||||||||||||||    
T  4462761 -ggccccgcaagtggacggtgggattgatccactcggattagtttattcttggattggataccgagttttaaa 4462832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 170
Target Start/End: Original strand, 48104989 - 48105073
Alignment:
Q  88 ctctggctttaaacggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagttt 170  Q
    |||||||||||||| | |||||||||||||||||||| |||| || || ||| |||||||||||||||||| |||||||||||||    
T  48104989 ctctggctttaaacagggcccccacaagtgggcggtgagattggtcccttcggattagtcgattcttggatcggataccgagttt 48105073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 53288885 - 53288710
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    ||||||| || ||||||||| ||||| |||||||||| |||||||  | |||||| ||||||| ||||||||||||||||| ||    || |||||||||    
T  53288885 ttgggatattagagtttgctcctccaaaggtctcaggctcgattccctctggtgccaatttcggtggactaagtccatacaaagcttgctttggctttaa 53288786  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    |||| | |||| |||  || ||||| ||||||| || ||||||||||||||| |||||| || |||| |||||||||    
T  53288785 acgg-ggccccgcaaacggacggtgagattagtcccctcgaattagtcgattattggatcggttaccaagttttaaa 53288710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 88 - 171
Target Start/End: Original strand, 1178284 - 1178367
Alignment:
Q  88 ctctggctttaaacggagcccccacaagtgggcggtgggattagtccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    ||||||||||||| || ||||| ||| ||||||||||||||| |||| ||| ||||||||| |||||||| ||||||||||||||    
T  1178284 ctctggctttaaatggggcccc-acacgtgggcggtgggattggtccctcggattagtcgaatcttggatcggataccgagtttt 1178367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 171
Target Start/End: Complemental strand, 24165817 - 24165715
Alignment:
Q  70 aagtccatacagagtaaactctggctttaaacggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgag 167  Q
    ||||||||||||||    |||||||||||||||| |||||  ||||||||||||||||||  | || ||| |||||||||||||||||| ||||||||||    
T  24165817 aagtccatacagagcttgctctggctttaaacggggccccg-caagtgggcggtgggattgttcccctcggattagtcgattcttggatcggataccgag 24165719  T
Q  168 tttt 171  Q
    ||||    
T  24165718 tttt 24165715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 49167084 - 49167209
Alignment:
Q  5 gatcttggagtttgcttctccagaggtctcaggttcgattct-tttggtgcgaatttcgatggactaagtccatacagag---taaactctggctttaaa 100  Q
    |||||||||||||||| ||||| || | |||||||||||||| | |||||  ||||||| ||||||||||||||||| ||   |   |||||||||||||    
T  49167084 gatcttggagtttgctcctccaaagatatcaggttcgattctctctggtgtcaatttcggtggactaagtccatacatagcgttttgctctggctttaaa 49167183  T
Q  101 cggagcccccacaagtgggcggtggg 126  Q
    |||  ||||| |||||||| ||||||    
T  49167184 cgggacccccgcaagtgggtggtggg 49167209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 134
Target Start/End: Complemental strand, 7470384 - 7470255
Alignment:
Q  5 gatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacgg 103  Q
    |||||||||||||||| ||||| ||||||||||||||||| | | |  ||| ||||||| ||| |||||| |||||||||    ||||||||||||||||    
T  7470384 gatcttggagtttgctcctccaaaggtctcaggttcgattccctctaatgccaatttcggtgggctaagttcatacagagcttgctctggctttaaacgg 7470285  T
Q  104 agcccccacaagtgggcggtgggattagtcc 134  Q
     | |||  ||||||||| |||||||| ||||    
T  7470284 -ggccctgcaagtgggcagtgggattggtcc 7470255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 51532821 - 51532947
Alignment:
Q  9 ttggagtttgcttctccagaggtctcaggttcgattct-tttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacggagcc 107  Q
    |||||||||||||||||| |||||||| |||||||||| | |  ||| ||||||| ||| ||||||||||||||||    ||||  ||||||| ||  ||    
T  51532821 ttggagtttgcttctccaaaggtctcatgttcgattctctctaatgccaatttcggtgggctaagtccatacagagcttgctctaactttaaatgggacc 51532920  T
Q  108 cccacaagtgggcggtgggattagtcc 134  Q
    ||| ||||||| |||||||||| ||||    
T  51532921 cccgcaagtggacggtgggattggtcc 51532947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 171
Target Start/End: Complemental strand, 48972854 - 48972714
Alignment:
Q  31 tctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacggagcccccacaagtgggcggtgggatt 129  Q
    |||||||||||||||  | |||||| |||||||||||  ||||| |||| |||||   ||||| ||||||||||| |||   |||||||| ||||  |||    
T  48972854 tctcaggttcgattccctctggtgccaatttcgatgggttaagttcatatagagtttgctctgactttaaacggatccc---caagtggggggtgaaatt 48972758  T
Q  130 agtcca-tcgaattagtcgattcttggat-ggataccgagtttt 171  Q
     ||||| ||||||||||||||||||| || ||||||||||||||    
T  48972757 ggtccattcgaattagtcgattcttgaatcggataccgagtttt 48972714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 174
Target Start/End: Original strand, 54475796 - 54475881
Alignment:
Q  91 tggctttaaacggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    ||||||||||||| ||| || |||||||||||||||||| || || | | ||||||||||||||||||  ||||||||||||||||    
T  54475796 tggctttaaacggggccaccgcaagtgggcggtgggattggtccccttggattagtcgattcttggatcagataccgagttttaaa 54475881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 9853640 - 9853684
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattc 45  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||    
T  9853640 ttgggatcttggagtttgctcctccaaaggtctcaggttcgattc 9853684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 171
Target Start/End: Complemental strand, 53848501 - 53848434
Alignment:
Q  106 cccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    ||||| |||||||||||||||||| || || ||| |||||||||||||||||| ||||||||||||||    
T  53848501 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 53848434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 19857078 - 19857148
Alignment:
Q  4 ggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagt 73  Q
    ||||||||||||||||| ||||||| ||||||||||||||| | |||||||  ||||||| ||| ||||||    
T  19857078 ggatcttggagtttgctcctccagatgtctcaggttcgattccctttggtgtcaatttcggtgggctaagt 19857148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 174
Target Start/End: Original strand, 25017620 - 25017688
Alignment:
Q  107 ccccacaagtgggcggtgggattagtccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    |||| |||||||||||||||||| || | | | |||||||||||||||||| | |||||||||||||||    
T  25017620 ccccgcaagtgggcggtgggattggttccttggattagtcgattcttggatcgaataccgagttttaaa 25017688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 8958209 - 8958035
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    ||||||||||||||| |||| || || |||||| | |||||||| | | |||||  ||||| | ||| ||||||||||||| ||    |||| |||||||    
T  8958209 ttgggatcttggagtctgctccttcaaaggtcttatgttcgatttcctctggtgtcaattttggtgggctaagtccatacaaagcttgctctagctttaa 8958110  T
Q  100 ac-ggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |  || |||||| |||||||||||||||||| || || ||  |||| |||||||||||||  |||||||||||||    
T  8958109 aatggggcccccgcaagtgggcggtgggattggtcccctctgattaatcgattcttggatcagataccgagtttt 8958035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 14343457 - 14343379
Alignment:
Q  5 gatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacaga 82  Q
    |||||||||||||||| ||||||| ||||||| ||||||| | | ||  || |||||| |||| |||||||||||||||    
T  14343457 gatcttggagtttgctcctccagatgtctcagattcgatttcatctgacgccaatttcaatgggctaagtccatacaga 14343379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 129
Target Start/End: Original strand, 26158846 - 26158964
Alignment:
Q  5 gatcttggagtttgcttctccagaggtctcaggttcgattct-tttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacgg 103  Q
    ||||||||||| |||| |||   ||||||||||||  ||||  |||||||| ||||||| |||  |||||||||||||      |||||||||  |||||    
T  26158846 gatcttggagtgtgctcctctcaaggtctcaggtttcattccctttggtgccaatttcggtggg-taagtccatacag------ctctggcttagaacgg 26158938  T
Q  104 agcccccacaagtgggcggtgggatt 129  Q
    ||||||| ||||||||||||||||||    
T  26158939 agcccccgcaagtgggcggtgggatt 26158964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 173
Target Start/End: Complemental strand, 50731305 - 50731235
Alignment:
Q  105 gcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagttttaa 173  Q
    |||| |||||||||||||||||||| || || ||  |||||||||| ||||||| ||||||||||||||||    
T  50731305 gcccacacaagtgggcggtgggattggtcccctcagattagtcgatccttggatcggataccgagttttaa 50731235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 173
Target Start/End: Original strand, 50781549 - 50781619
Alignment:
Q  105 gcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagttttaa 173  Q
    |||| |||||||||||||||||||| || || ||  |||||||||| ||||||| ||||||||||||||||    
T  50781549 gcccacacaagtgggcggtgggattggtcccctcagattagtcgatccttggatcggataccgagttttaa 50781619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 157
Target Start/End: Complemental strand, 55371379 - 55371309
Alignment:
Q  88 ctctggctttaaacggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat 157  Q
    ||||||||| |||||| |||| | |||||||||||||||||| || || ||| |||||||||| |||||||    
T  55371379 ctctggcttaaaacggggccctcgcaagtgggcggtgggattggtcccctcggattagtcgatccttggat 55371309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 171
Target Start/End: Complemental strand, 33698791 - 33698706
Alignment:
Q  88 ctctggctttaaacggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||||||||||||||| || ||| ||| |||| ||||||||| || || || |||||||||||||| |||| |||| |||||||||    
T  33698791 ctctggctttaaacggggctcccgcaaatgggtggtgggattggtcccctcaaattagtcgattctcggatcggatgccgagtttt 33698706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 38732990 - 38733035
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattct 46  Q
    |||| ||||||||||||| | ||||||||||||||||| |||||||    
T  38732990 ttggaatcttggagtttgttcctccagaggtctcaggtccgattct 38733035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 4048086 - 4048150
Alignment:
Q  112 caagtgggcggtgggattagtcca-tcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    ||||||| |||||||||| ||||  ||| |||||| ||||||||||| |||||||||||||||||    
T  4048086 caagtggacggtgggattggtcccctcggattagttgattcttggatcggataccgagttttaaa 4048150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 55287827 - 55287907
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccataca 80  Q
    |||| ||||| ||||||||| || ||||||| |||||||||||| | | |||||| ||||| ||||| ||| |||||||||    
T  55287827 ttggaatcttagagtttgctccttcagaggtttcaggttcgattccctctggtgccaattttgatgggctaggtccataca 55287907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 2e-45; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 17935793 - 17935965
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| |||||||||||||||||||||||| || | |||| ||||||| ||| |||||||||||||||||   ||||||||||||    
T  17935793 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccttctagtgccaatttcggtgggctaagtccatacagagtttgctctggctttaa 17935892  T
Q  100 acggagcccccacaagtgggcggtgggattagtcca-tcgaattagtcgattcttggat-ggataccgagttt 170  Q
    |||| |||||| |||||||||| ||||||| ||||| ||| |||||||||||||||||| |||||||||||||    
T  17935893 acggggcccccgcaagtgggcgatgggattggtccactcggattagtcgattcttggatcggataccgagttt 17935965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 9500528 - 9500355
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| || |||||||||||||||||||||| | |||||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  9500528 ttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 9500429  T
Q  100 acggagcccccacaagtgggcggtgggattagtc-catcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    ||||||||||||||||||||||||| |||| ||| | ||| |||||||||||||||||| ||||| ||||||||    
T  9500428 acggagcccccacaagtgggcggtgagattggtctcttcggattagtcgattcttggatcggatatcgagtttt 9500355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 24674417 - 24674593
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | | |||||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  24674417 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 24674516  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    |||| |||||| |||||||||||||||||| || || ||| |||||||||||||||||| ||||||||| |||||||    
T  24674517 acggggcccccgcaagtgggcggtgggattggtcccctcgtattagtcgattcttggatcggataccgaattttaaa 24674593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 4621410 - 4621237
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | | |||||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  4621410 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 4621311  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| | |||| |||||||||||||||||| || || ||| |||||||||||||||||| ||||||||||||||    
T  4621310 acggggtccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 4621237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 15059575 - 15059402
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattct-tttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||| | |||||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  15059575 ttggaatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 15059476  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| | |||| ||||||||||||| |||| || || |||||||||||||||||||||| ||||||||||||||    
T  15059475 acggggtccccgcaagtgggcggtgagattggtcccctcgaattagtcgattcttggatcggataccgagtttt 15059402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 24122047 - 24122223
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||| ||||||| ||||||||||||||||||||||| | | |||||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  24122047 ttgggatcttggggtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 24122146  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    |||| || ||| |||||||||||||||||| || || ||| |||||||||||||||||| |||||||||||||||||    
T  24122147 acggggctcccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttaaa 24122223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 7766900 - 7766727
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | | |||||| ||||||| ||| ||||||||||||||||    ||||| ||||||    
T  7766900 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggctaagtccatacagagcttgctctgactttaa 7766801  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| |||||| |||||||||||||||||| || || ||| ||||||||||||||| || ||||| ||||||||    
T  7766800 acggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggatatcgagtttt 7766727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 8077671 - 8077805
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattct-tttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| | |||||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  8077671 ttgggatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 8077770  T
Q  100 acggagcccccacaagtgggcggtgggattagtcc 134  Q
    || | |||||| |||||||||||||||||| ||||    
T  8077771 acagggcccccgcaagtgggcggtgggattggtcc 8077805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 8779909 - 8779755
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcga-ttcttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||| | |||  ||||||| ||| ||||||||||||| ||   ||||| |||||||    
T  8779909 ttgggatcttggagtttgcttctccagaggtctcagcttcgatttcttctagtgtcaatttcggtgggctaagtccatacacagcttactctagctttaa 8779810  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattctt 153  Q
    |||| |||||||||||| |||||||||||| || || ||| ||||||||||||||    
T  8779809 acggggcccccacaagtaggcggtgggattggtcccctcggattagtcgattctt 8779755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 5 - 166
Target Start/End: Original strand, 18646881 - 18647045
Alignment:
Q  5 gatcttggagtttgcttctccagaggtctcaggttcgattct-tttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacgg 103  Q
    |||||| ||||||||||||||||||||||||||||||||||| | |||||| ||||||| ||| ||||||| ||||| |||   ||||||||||||||||    
T  18646881 gatctttgagtttgcttctccagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagtctatacaaagtttgctctggctttaaacgg 18646980  T
Q  104 agcccccacaagtgggcggtgggatt-agtccatcgaattagtcgattcttggat-ggataccga 166  Q
    ||||||   |||||||||||| |||| |  || ||||||||||||||||||| || |||||||||    
T  18646981 agcccctgtaagtgggcggtgagattgatcccctcgaattagtcgattcttgaatcggataccga 18647045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 7578433 - 7578606
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||| | ||||||||||||||||||||||| | | |||||| ||||||| ||| ||||||||||||| ||    ||||| ||||||    
T  7578433 ttgggatcttggagtttgttcctccagaggtctcaggttcgattccctatggtgccaatttcggtgggctaagtccatacaaagcttgctctgactttaa 7578532  T
Q  100 acggagcccccacaagtgggcggtgggattag-tccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| |||| | |||||||| ||||||||| | ||| ||| |||||| |||| |||||| ||||||||||||||    
T  7578533 acggggccctcgcaagtgggtggtgggattggttccctcggattagttgatttttggatcggataccgagtttt 7578606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 27455039 - 27454864
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattc-ttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||||  | || ||| ||||||| ||  ||||||||||||||||    ||||||||||||    
T  27455039 ttgggatcttggagtttgctcctccagaggtctcaggttcgattcactctgatgccaatttcggtgagctaagtccatacagagcttgctctggctttaa 27454940  T
Q  100 acgg--agcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    ||||    ||||| || ||||||||||||||| || || ||| |||||||||||||||||| ||||||| ||||||    
T  27454939 acgggccccccccgcatgtgggcggtgggattggtcccctcggattagtcgattcttggatcggatacctagtttt 27454864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 36156061 - 36155885
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| |||||||||| |||||||||||| | | |||||| ||||||| ||| | |||||||| |||||    || | | |||||    
T  36156061 ttgggatcttggagtttgctcctccagaggtgtcaggttcgattccctctggtgccaatttcggtgggccaagtccatgcagagcttgctttagttttaa 36155962  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    || | |||||| || ||||||||||||||| || || || ||||||||||||||||||| |||||||||||||||||    
T  36155961 acagggcccccgcaggtgggcggtgggattggtcccttcaaattagtcgattcttggatcggataccgagttttaaa 36155885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 37351634 - 37351454
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacaga---------gtaaactc 90  Q
    |||||||||||||||||||| ||||| | ||||||||||||||| ||| || ||| ||||||| ||| |||||||||||||||         | || |||    
T  37351634 ttgggatcttggagtttgctcctccaaatgtctcaggttcgattccttctgatgccaatttcggtgggctaagtccatacagagcttgctctggaagctc 37351535  T
Q  91 tggctttaaacggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagttt 170  Q
    ||||||||||||| ||||||||||||||||||||||||| || || ||| |||||||| | ||||||| |||||||||||||    
T  37351534 tggctttaaacgg-gcccccacaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttt 37351454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 46607834 - 46607963
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||| ||||||||||||||||| | | |||||| ||||||| ||| ||||||||||||||||    ||||| ||||||    
T  46607834 ttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctgactttaa 46607933  T
Q  100 acggagcccccacaagtgggcggtgggatt 129  Q
    | ||  ||||| ||||||||||||||||||    
T  46607934 aaggcccccccgcaagtgggcggtgggatt 46607963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 21726753 - 21726879
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    ||||| ||||| |||||||| ||||||||||||||||||||||| | |||||||| |||||||||||  |||||||||| ||||     ||| |||||||    
T  21726753 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctttggtgccaatttcgatgggttaagtccatatagagcttgttctagctttaa 21726852  T
Q  100 acggagcccccacaagtgggcggtggg 126  Q
    ||||  |||||||||||||||||||||    
T  21726853 acgggtcccccacaagtgggcggtggg 21726879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 7197419 - 7197247
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | | || ||| ||||||| |||  |||||| |||||||     ||||||||||||    
T  7197419 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctgatgccaatttcggtgg-gtaagtcaatacagaccttgctctggctttaa 7197321  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||  |||||  ||||||||||||| |||| || || ||| |||||||||||| ||||| ||||||||||||||    
T  7197320 acgaggcccctgcaagtgggcggtgagattggtcccctcggattagtcgattcatggatcggataccgagtttt 7197247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 30677200 - 30677334
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    ||||||||| |||||||||| ||||| |||||||||||| |||| | | |||||| ||||||| ||| ||||||||||||||||    || |||||||||    
T  30677200 ttgggatctaggagtttgctcctccaaaggtctcaggtttgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctttggctttaa 30677299  T
Q  100 acggagcccccacaagtgggcggtgggattagtcc 134  Q
    | ||  ||||| |||||||||||||||||| ||||    
T  30677300 atgggacccccgcaagtgggcggtgggattggtcc 30677334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 34778366 - 34778535
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| |||||||||||||||||| |||||  | |||| | ||||| | |||  |   ||||||||||||   || |||||||||    
T  34778366 ttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtaccaattttggtgggtt---tccatacagagtttgctttggctttaa 34778462  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagttt 170  Q
    |||| |||||| ||||||| |||||||||| || || | | |||||||||||||||||| |||||||||||||    
T  34778463 acggggcccccgcaagtggacggtgggattggtccccttggattagtcgattcttggatcggataccgagttt 34778535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 171
Target Start/End: Complemental strand, 8254901 - 8254752
Alignment:
Q  25 cagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacggagcccccacaagtgggcggt 123  Q
    |||||||||||||||||||| | | |||||  ||||||| ||| |||||| ||||||||     |||||||||||||||| |||||| ||||||||||||    
T  8254901 cagaggtctcaggttcgattatctctggtgtcaatttcggtgggctaagttcatacagaacttgctctggctttaaacggggcccccgcaagtgggcggt 8254802  T
Q  124 gggatt-agtccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||||| |  || | ||||||||||||||||| || ||||||||||||||    
T  8254801 gggattgatccccttgaattagtcgattcttgaatcggataccgagtttt 8254752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 33905683 - 33905554
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | | ||||   ||||||| |||  ||||||||||||||||    |||||||||||    
T  33905683 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtatcaatttcggtgggttaagtccatacagagtttgttctggctttaa 33905584  T
Q  100 acggagcccccacaagtgggcggtgggatt 129  Q
    |||| ||| ||  |||||| ||||||||||    
T  33905583 acggggcctccgtaagtggacggtgggatt 33905554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 45859216 - 45859043
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||| ||||||||||||||||||| | | |||||| ||||||| ||| |||||||||||||  |    |||| |||||||    
T  45859216 ttgggatcttggagtttgctcctctagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacatcgcttgctcttgctttaa 45859117  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    || | |||||| |||||||| ||| ||||| || || ||| |||||| |||| |||||| ||||||||| ||||    
T  45859116 acagggcccccgcaagtgggtggtaggattggtcccctcggattagttgattattggatcggataccgaatttt 45859043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 23734140 - 23734314
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||| || |||||| ||||||||||||||||||||||| | | || ||| ||||||| ||| |||||||||||||||||   || || ||||||    
T  23734140 ttgggatcttagaatttgctcctccagaggtctcaggttcgattccctctgatgccaatttcggtgggctaagtccatacagagtttgctatgcctttaa 23734239  T
Q  100 acggag-cccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| | ||||| |||||||||||||  ||| || || ||  ||||||||||||||| || ||||||| ||||||    
T  23734240 acggggccccccgcaagtgggcggtgaaattggtcccctcagattagtcgattcttgaatcggataccaagtttt 23734314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 23741332 - 23741506
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||| || |||||| ||||||||||||||||||||||| | | || ||| ||||||| ||| |||||||||||||||||   || || ||||||    
T  23741332 ttgggatcttagaatttgctcctccagaggtctcaggttcgattccctctgatgccaatttcggtgggctaagtccatacagagtttgctatgcctttaa 23741431  T
Q  100 acggag-cccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| | ||||| |||||||||||||  ||| || || ||  ||||||||||||||| || ||||||| ||||||    
T  23741432 acggggccccccgcaagtgggcggtgaaattggtcccctcagattagtcgattcttgaatcggataccaagtttt 23741506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 1378922 - 1379090
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcga-ttcttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||| | |||||| |||||| ||| | |||||  ||||||| ||| |||||||||||||||     ||||||||||||    
T  1378922 ttgggatcttggagtttgctcctccaaaagtctcatgttcgatttcctctggtgtcaatttcggtgggctaagtccatacagaacttgctctggctttaa 1379021  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgag 167  Q
    |||| |||||| ||||||| ||||| |||| || || ||  |||||||||||||| ||| ||||||||||    
T  1379022 acgg-gcccccgcaagtggacggtgagattggtcccctcagattagtcgattcttagatcggataccgag 1379090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 2272368 - 2272521
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||| ||||||||| || ||||||||||||||| |||| | | || ||| ||||||| ||| |||||| |||||| |||   ||||| ||||||    
T  2272368 ttgggatcttagagtttgctcctacagaggtctcaggtttgattccctctgatgccaatttcgctgggctaagttcatacaaagtttgctctgactttaa 2272467  T
Q  100 acggagcccccacaagtgggcggtgggatt-agtccatcgaattagtcgattct 152  Q
    |||| ||||| ||||| ||||||| ||||| |  |||||| |||||||||||||    
T  2272468 acggggcccctacaagggggcggtaggattgatcccatcggattagtcgattct 2272521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 46113575 - 46113495
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccataca 80  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | | |||| | ||||||| ||| |||||||||||||    
T  46113575 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtaccaatttcggtgggctaagtccataca 46113495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 134
Target Start/End: Complemental strand, 18533893 - 18533763
Alignment:
Q  5 gatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacgg 103  Q
    |||||| ||||||||| |||||||||| |||| || |||||| | | |||| ||||||||||||||||||||||| ||||     |||| ||||||||||    
T  18533893 gatcttagagtttgctcctccagaggtatcagatttgattctctctagtgccaatttcgatggactaagtccatatagagcttgttctgactttaaacgg 18533794  T
Q  104 agcccccacaagtgggcggtgggattagtcc 134  Q
     |||||  ||||||||| |||||||| ||||    
T  18533793 ggcccctgcaagtgggccgtgggattggtcc 18533763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 88 - 171
Target Start/End: Original strand, 22909983 - 22910068
Alignment:
Q  88 ctctggctttaaacggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    ||||| ||||||||||||||||| |||||||||||||||||| || || ||| |||||||||| ||| ||| ||||||||||||||    
T  22909983 ctctgactttaaacggagcccccgcaagtgggcggtgggatttgtcccctcggattagtcgatacttcgatcggataccgagtttt 22910068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 23232438 - 23232300
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacaga----gtaaactctggct 95  Q
    ||||||||||| ||||||||  ||||||||| |||||||||||| | | ||| || ||||||| ||| |||||||||||||||    | || ||||||||    
T  23232438 ttgggatcttgaagtttgctcttccagaggtttcaggttcgattccctctggcgccaatttcggtgggctaagtccatacagagcttgcaagctctggct 23232339  T
Q  96 ttaaacggagcccccacaagtgggcggtgggattagtcc 134  Q
    ||||| ||  ||||| |||||||| ||||||||| ||||    
T  23232338 ttaaatgggacccccgcaagtgggtggtgggattggtcc 23232300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 48699875 - 48699956
Alignment:
Q  92 ggctttaaacggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    ||||||||||||||||||| ||||||||||||||||||  | || ||| |||||||||||||||||| ||||| ||||||||    
T  48699875 ggctttaaacggagcccccgcaagtgggcggtgggattgttcccttcggattagtcgattcttggatcggatatcgagtttt 48699956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 88 - 174
Target Start/End: Complemental strand, 26513232 - 26513145
Alignment:
Q  88 ctctggctttaaacggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    ||||| |||||||||| ||||||||||||||||||||||| | || || ||| |||||||||||||||||| | |||||||||||||||    
T  26513232 ctctgactttaaacgg-gcccccacaagtgggcggtgggaatggtcccctcggattagtcgattcttggatcgaataccgagttttaaa 26513145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 32729569 - 32729697
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||| ||||||||| |||   | ||||||||||||||||  | |||||| ||||||| ||| | ||||||||||||||    ||||||||||||    
T  32729569 ttgggatcttcgagtttgctcctctcaaagtctcaggttcgattccctatggtgccaatttcggtgggc-aagtccatacagagcttgctctggctttaa 32729667  T
Q  100 acggagcccccacaagtgggcggtgggatt 129  Q
    | || | |||| ||||||||||||||||||    
T  32729668 atggggtccccgcaagtgggcggtgggatt 32729697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 29057510 - 29057466
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattc 45  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||    
T  29057510 ttgggatcttggagtttgctgctccaaaggtctcaggttcgattc 29057466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 7946872 - 7946951
Alignment:
Q  5 gatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagag 83  Q
    ||||||| |||||||| |||||||||||||| |||||||| | | |||||| ||||||| ||| ||||||| ||||||||    
T  7946872 gatcttgaagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttcggtgggctaagtctatacagag 7946951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 170
Target Start/End: Complemental strand, 36921596 - 36921513
Alignment:
Q  89 tctggctttaaacgg-agcccccacaagtgggcggtgggattagtccatcgaattagtcgattcttggat-ggataccgagttt 170  Q
    |||||||||||| || | ||||| ||||||| ||||||||||||||| || |||||||||||| ||| || |||||||||||||    
T  36921596 tctggctttaaatgggaccccccgcaagtggacggtgggattagtccctcaaattagtcgattattgaatcggataccgagttt 36921513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 20487361 - 20487319
Alignment:
Q  3 gggatcttggagtttgcttctccagaggtctcaggttcgattc 45  Q
    |||||||||||||||||| |||||||||||||| |||||||||    
T  20487361 gggatcttggagtttgctcctccagaggtctcaagttcgattc 20487319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 174
Target Start/End: Complemental strand, 45331739 - 45331618
Alignment:
Q  56 aatttcgatggactaagtccatacagagtaaactctggctttaaacggagc-ccccacaagtgggcggtgggattagt-ccatcgaattagtcgattctt 153  Q
    ||||||| ||| ||||||||||||||||    || ||||||||||||| || |||| ||||||| ||||||||||| | || ||  |||| |||||||||    
T  45331739 aatttcggtgggctaagtccatacagagcttgctttggctttaaacggggctccccgcaagtggacggtgggattaatcccctcagattaatcgattctt 45331640  T
Q  154 ggat-ggataccgagttttaaa 174  Q
    | || |||||||||||||||||    
T  45331639 gaatcggataccgagttttaaa 45331618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 25237162 - 25237118
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattc 45  Q
    ||||||||||||||||||||||||   ||||||||||||||||||    
T  25237162 ttgggatcttggagtttgcttctctcaaggtctcaggttcgattc 25237118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 168225 - 168308
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagag 83  Q
    |||||||||| |||||||||  | || ||||||||||||||||| | | |||||| ||||||| ||| |||||| |||||||||    
T  168225 ttgggatcttagagtttgctctttcaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagttcatacagag 168308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 173
Target Start/End: Original strand, 23041658 - 23041721
Alignment:
Q  112 caagtgggcggtgggattagtcca-tcgaattagtcgattcttggat-ggataccgagttttaa 173  Q
    ||||||| | |||||||| ||||  |||||||||||||||||||||| ||||||||||||||||    
T  23041658 caagtggacagtgggattggtcccctcgaattagtcgattcttggatcggataccgagttttaa 23041721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 36965295 - 36965347
Alignment:
Q  75 catacagagtaaactctggctttaaacggagcccccacaagtgggcggtgggatt 129  Q
    ||||||||| |||||||||||||||||  || |||| ||||||||||||||||||    
T  36965295 catacagagcaaactctggctttaaac--agaccccgcaagtgggcggtgggatt 36965347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 174
Target Start/End: Original strand, 47091742 - 47091821
Alignment:
Q  97 taaacggagcccccacaagtgggcggtgggattagtcca-tcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    |||||||||||||| |||||||| ||||||||| ||||| |||| |||||  |||||||||| ||||| ||| |||||||    
T  47091742 taaacggagcccccgcaagtggggggtgggattggtccattcgatttagtaaattcttggatcggatatcgaattttaaa 47091821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 35138118 - 35138188
Alignment:
Q  106 cccccacaagtgggcggtgggatt-agtccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    ||||| |||||||||||||||||| | ||| ||| |||||||| | ||||||| |||||||||||||||||    
T  35138118 cccccgcaagtgggcggtgggattgattccctcggattagtcggtccttggatcggataccgagttttaaa 35138188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 1818761 - 1818802
Alignment:
Q  4 ggatcttggagtttgcttctccagaggtctcaggttcgattc 45  Q
    |||||||||||||||||  ||||||||| |||||||||||||    
T  1818761 ggatcttggagtttgctcttccagaggtttcaggttcgattc 1818802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 32930773 - 32930902
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcga-ttcttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||| |||||||||||| || || ||||||||||| |||||| ||| | ||||||  |||| | ||| |||||||||| |||||    ||||||||||||    
T  32930773 ttggaatcttggagtttactccttcagaggtctcaagttcgatttcctctggtgcccattttggtgggctaagtccatgcagagcttgctctggctttaa 32930872  T
Q  100 acggagcccccacaagtgggcggtgggatt 129  Q
    |||| | |||  |||||||  |||||||||    
T  32930873 acggggtccctgcaagtggatggtgggatt 32930902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 1486469 - 1486524
Alignment:
Q  28 aggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagag 83  Q
    ||||||||||||||||| | |||||||| |||||||||||  |||||||||||||||    
T  1486469 aggtctcaggttcgattccctttggtgccaatttcgatgg-gtaagtccatacagag 1486524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 14258600 - 14258556
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattc 45  Q
    |||||||||||||||||| | ||||||| ||||| ||||||||||    
T  14258600 ttgggatcttggagtttgttcctccagatgtctctggttcgattc 14258556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 4 - 171
Target Start/End: Original strand, 40352 - 40521
Alignment:
Q  4 ggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacg 102  Q
    ||||||||||||||||| || |||||||||||||||||||||  | |||||| ||||||| ||| ||||||||||||||||    |||||||||||||||    
T  40352 ggatcttggagtttgctccttcagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacg 40451  T
Q  103 gagcccccacaagtgggcggtgggattagtccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    | |||||| |||||||||||||||||| |||| ||| |||||||||||||||||| ||||||||||||||    
T  40452 gggcccccgcaagtgggcggtgggattggtccctcggattagtcgattcttggatcggataccgagtttt 40521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 2e-43; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 22119916 - 22120089
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | | |||||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  22119916 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 22120015  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| |||||| |||||||||||||||||| || || ||| |||||||||||||||||| ||||||||||||||    
T  22120016 acggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 22120089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 40543083 - 40542910
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | | |||||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  40543083 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 40542984  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| |||||| |||||||||||||||||| || || ||| |||||||||||||||||| ||||||||||||||    
T  40542983 acggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 40542910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 7275305 - 7275478
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | | |||||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  7275305 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 7275404  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    || | |||||| |||||||||||||||||| || || ||| |||||||||||||||||| ||||||||||||||    
T  7275405 acagggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 7275478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 2751299 - 2751472
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||| ||||||||||||||||| | | |||||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  2751299 ttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 2751398  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| |||||| ||| |||||||||||||| || || ||| |||||||||||||||||| ||||||||||||||    
T  2751399 acggggcccccgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 2751472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 21835179 - 21835352
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| |||||||| |||||||||||||| | | |||||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  21835179 ttgggatcttggagtttgctcctccagagatctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 21835278  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| |||||| |||||||||||||||||| || || ||| |||||||||||||||||| ||||| ||||||||    
T  21835279 acggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatatcgagtttt 21835352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 5 - 174
Target Start/End: Complemental strand, 17197119 - 17196947
Alignment:
Q  5 gatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacgg 103  Q
    |||||||||||||||| ||||| |||||||| |||||||||  | |||||| ||||||| ||  ||||||||||||||||    ||||||||||||||||    
T  17197119 gatcttggagtttgctcctccataggtctcaagttcgattccctctggtgccaatttcggtgagctaagtccatacagagcttgctctggctttaaacgg 17197020  T
Q  104 agcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
     |||||| |||||||||||||||||| || || |||||||||||||||||||||| |||||||||||||||||    
T  17197019 ggcccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagttttaaa 17196947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 2103083 - 2103254
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||||  | ||| || ||||||| ||| ||||||||||||||||    ||||||||||||    
T  2103083 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaa 2103182  T
Q  100 acggagcccccacaagtgggcggtgggattagtccatcgaattagtcgattcttggatggataccgagtttt 171  Q
    | || |||||| |||||||||||||||||| |||| ||| |||||||||||| ||   ||||||||||||||    
T  2103183 atggggcccccgcaagtgggcggtgggattggtccctcggattagtcgattcatgatcggataccgagtttt 2103254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 7176035 - 7175862
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | | |||||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  7176035 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 7175936  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    || |  ||||| |||||||||||||||||| || || ||| |||||||||||||||||| |||||| |||||||    
T  7175935 acaggacccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatactgagtttt 7175862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 11997877 - 11998050
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||| ||||||||||||||||||| | | |||||| ||||||| | | ||||||||||||| ||    ||||||||||||    
T  11997877 ttgggatcttggagtttgctcctctagaggtctcaggttcgattccctctggtgccaatttcggttggctaagtccatacatagcttgctctggctttaa 11997976  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    || | |||||| |||||||||||||||||| || || |||||||||||||||||||||| ||||||||||||||    
T  11997977 actgggcccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 11998050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 18044135 - 18044311
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||| ||||||||||| | | | |||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  18044135 ttgggatcttggagtttgctcctccagaggtcccaggttcgattccctcttgtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 18044234  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    |||| ||||||||||||||| ||||| ||| || || ||  |||||||||||||||||| |||||||||||||||||    
T  18044235 acggggcccccacaagtgggtggtggaattggtcccctcagattagtcgattcttggatcggataccgagttttaaa 18044311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 21218006 - 21217833
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | | || ||| ||||||| ||| ||||||||||||||||    |||| |||||||    
T  21218006 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctgatgccaatttcggtgggctaagtccatacagagcttgctctagctttaa 21217907  T
Q  100 acggagcccccacaagtgggcggtgggatt-agtccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    ||||  |||||||||||||||||||||||| |  || ||| |||||| ||||||||||| ||||||||||||||    
T  21217906 acgggccccccacaagtgggcggtgggattgatcccctcggattagttgattcttggatcggataccgagtttt 21217833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 27312180 - 27312353
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||| |||||| |||||||||||||  | | |||| ||||||||||  | ||||||||||||||  | ||||| ||||||    
T  27312180 ttgggatcttggagtttgctcctctagaggtttcaggttcgattccctctagtgccaatttcgatgtgccaagtccatacagagctacctctgactttaa 27312279  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    ||||||||||| |||||||||||||||||| || || ||  |||||||||||||||||| ||||||||||||||    
T  27312280 acggagcccccgcaagtgggcggtgggattggtcccctcagattagtcgattcttggatcggataccgagtttt 27312353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 19421259 - 19421431
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcga-ttcttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||| ||||||||||||||||| ||||| |||||  ||||||||||| ||||||||||||||||    ||||| ||||||    
T  19421259 ttgggatcttggagtttgctcctctagaggtctcaggttcgatttcttctggtgtcaatttcgatgggctaagtccatacagagcttgctctgactttaa 19421358  T
Q  100 acggagcccccacaagtgggcggtgggattagtc-catcgaattagtcgattcttggat-ggataccgagttt 170  Q
    | || || |||||||||||||||||||||| ||| | ||| ||||||||||||||| ||  ||||||||||||    
T  19421359 atggggcgcccacaagtgggcggtgggattggtctcctcggattagtcgattcttgaatcagataccgagttt 19421431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 22703514 - 22703687
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | | |||||  ||||||| ||| ||||||||||||| ||    ||||||||||||    
T  22703514 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgtcaatttcggtgggctaagtccatacaaagcttgctctggctttaa 22703613  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    ||||  ||||| |||||||||||||||||| || || ||| |||||||||||||| ||| ||||||| ||||||    
T  22703614 acgggacccccgcaagtgggcggtgggattggtcccctcggattagtcgattctttgatcggatacccagtttt 22703687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 23012681 - 23012508
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    ||||||||||||||||||||||||||||||||| ||||| |||| | | | |||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  23012681 ttgggatcttggagtttgcttctccagaggtcttaggtttgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 23012582  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    | || ||||||||||||||||||||||||| || || ||| ||||||| |||| | ||| ||||||||||||||    
T  23012581 atggggcccccacaagtgggcggtgggattggtcccctcgtattagtcaattcattgatcggataccgagtttt 23012508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 42913686 - 42913513
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcga-ttcttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||| ||||||||||||||||| ||| | |||||| |||||||||||  ||||||||||| ||     ||||||||||||    
T  42913686 ttgggatcttggagtttgctcctctagaggtctcaggttcgatttcatatggtgccaatttcgatgggataagtccatacggaacttgctctggctttaa 42913587  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| |||||| ||||||| |||||||||| || || ||| |||||| ||||||| ||| ||||||||||||||    
T  42913586 acggggcccccgcaagtggacggtgggattggtcccctcggattagttgattcttagatcggataccgagtttt 42913513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 10091216 - 10091388
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | | ||| || ||||||| ||| ||||||||||||||||    ||||||||||||    
T  10091216 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaa 10091315  T
Q  100 acggagcccccacaagtgggcggtgggatt-agtccatcgaattagtcgattcttggatggataccgagtttt 171  Q
    | || | |||| |||||||||||||||||| |  || ||| |||||||||||||||    |||||||||||||    
T  10091316 atggggtccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttgatccgataccgagtttt 10091388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 15 - 171
Target Start/End: Complemental strand, 654863 - 654705
Alignment:
Q  15 tttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacggagcccccaca 113  Q
    |||||| ||||| ||||||||||||||||||  | |||||| ||||||| ||| ||||||||||||||||    |||||||||||||||| |||||| ||    
T  654863 tttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacgg-gcccccgca 654765  T
Q  114 agtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||||||||||||||| || || ||| |||||||| ||||||||| ||||||||||||||    
T  654764 agtgggcggtgggattggtcccctcggattagtcggttcttggatcggataccgagtttt 654705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 17212081 - 17212239
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattct-tttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||| | |||||| ||||||| ||| ||||||||||||||||    ||||||||| ||    
T  17212081 ttgggatcttggagtttgctcctccagaggtctcaggttcaattctctctggtgccaatttcggtgggctaagtccatacagagattgctctggcttaaa 17212180  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat 157  Q
    ||||  ||||  |||||| | ||||||||| || || ||| ||||||||||||||||||    
T  17212181 acgggacccctgcaagtgagtggtgggattggtcccctcggattagtcgattcttggat 17212239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 27009390 - 27009564
Alignment:
Q  4 ggatcttggagtttgcttctccagaggtctcaggttcgat-tcttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacg 102  Q
    |||||||||||||||||  |||||||||||||||||||||  | | |||||| ||||||| ||| ||||||||||||||||    ||||| |||||||||    
T  27009390 ggatcttggagtttgctcatccagaggtctcaggttcgatcccctctggtgccaatttcggtgggctaagtccatacagagcttgctctgactttaaacg 27009489  T
Q  103 gagcccccac-aagtgggcggtgggattagt-ccatcgaattagtcgattcttgga-tggataccgagttttaaa 174  Q
    | |||||  | |||||| |||||||||| || || || |||||||||||||||||| ||||||||||||||||||    
T  27009490 gggcccctgcaaagtggacggtgggattggtcccctcaaattagtcgattcttggattggataccgagttttaaa 27009564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 25 - 171
Target Start/End: Original strand, 29861722 - 29861871
Alignment:
Q  25 cagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacggagcccccacaagtgggcggt 123  Q
    |||||||||||||||||||||  | |||||| ||||||| ||| |||||||||||||||     |||||||||||||||| |||||| ||||||||||||    
T  29861722 cagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagaacttgctctggctttaaacggggcccccgcaagtgggcggt 29861821  T
Q  124 gggatt-agtccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||||| |  || |||||||||||||||||| ||| ||||||||||||||    
T  29861822 gggattgatcccctcgaattagtcgattcttagatcggataccgagtttt 29861871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 28 - 174
Target Start/End: Complemental strand, 41907659 - 41907511
Alignment:
Q  28 aggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacggagcccccacaagtgggcggtggg 126  Q
    ||||||||||||||||||| | |||||| ||||||  ||| ||||||||||||||||    |||||||||||||||  |||||| |||||||| ||||||    
T  41907659 aggtctcaggttcgattctctctggtgccaatttcagtgggctaagtccatacagaggttgctctggctttaaacgtggcccccgcaagtgggtggtggg 41907560  T
Q  127 attagtccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    ||| ||||  |  |||||||||||||||||| |||||||||||||||||    
T  41907559 attggtcccccagattagtcgattcttggatcggataccgagttttaaa 41907511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 31197619 - 31197791
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaa 100  Q
    ||||||||||||||||||||  |||||| |||||||||| ||||| ||  |||  ||||||| |||| ||||||||||||||     |||| ||||||||    
T  31197619 ttgggatcttggagtttgctcatccagatgtctcaggtttgattcattatgtgtcaatttcggtggattaagtccatacagatcttgctcttgctttaaa 31197718  T
Q  101 cggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    ||| |||||| ||||||| |||||||||| || || ||  |||||||||||||||||| ||||| ||||||||    
T  31197719 cggggcccccgcaagtggtcggtgggattggtcccctcagattagtcgattcttggatcggatatcgagtttt 31197791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 2344327 - 2344500
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||| || |||||| ||||||| ||| |||||| ||||| | ||| ||||||||||||||||     | |||||||||    
T  2344327 ttgggatcttggagtttgctcctccaaagctctcagattcgattccttctggtgccaattttggtgggctaagtccatacagagctttttttggctttaa 2344426  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    ||||  ||||| |||||| ||||||||||| || || ||| |||||||| | ||||||| ||||||||||||||    
T  2344427 acgggacccccgcaagtgagcggtgggattggtcccctcggattagtcggtccttggatcggataccgagtttt 2344500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 16374034 - 16374195
Alignment:
Q  13 agtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacggagccccca 111  Q
    |||||||| ||||||||||||||| ||||||| | | |||||| ||||||| |||  |||||||||||||| |   || |||||||||||||  |||||     
T  16374034 agtttgctcctccagaggtctcagattcgattccctctggtgccaatttcggtgggttaagtccatacagaatttgctatggctttaaacgggacccccg 16374133  T
Q  112 caagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    ||| ||| |||||||||| || || ||| |||||||||||||||||| ||||||||||||||    
T  16374134 caaatggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 16374195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 31273942 - 31274114
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| |||||||| ||||| |||||||| | | ||| || |||||||  || ||||||||||||||||    ||||||||||||    
T  31273942 ttgggatcttggagtttgctcctccagagctctcaagttcgattccctctggagctaatttcggcgggctaagtccatacagagcttgctctggctttaa 31274041  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttgga-tggataccgagtttt 171  Q
    |||| | | || ||||||||| ||| |||| || || |||||||||||||||||||||  ||||||||||||||    
T  31274042 acgg-ggctccgcaagtgggcagtgagattggtcccctcgaattagtcgattcttggaccggataccgagtttt 31274114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 56 - 174
Target Start/End: Original strand, 3851841 - 3851961
Alignment:
Q  56 aatttcgatggactaagtccatacagagtaaactctggctttaaacggagcccccacaagtgggcggtgggatt-agtccatcgaattagtcgattcttg 154  Q
    ||||||| ||| ||||||||||| ||||    |||||||||||||||| |||||| |||||||||||||||||| |  || ||| |||||||||||||||    
T  3851841 aatttcggtgggctaagtccatatagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttg 3851940  T
Q  155 gat-ggataccgagttttaaa 174  Q
    ||| |||||||||||||||||    
T  3851941 gatcggataccgagttttaaa 3851961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 5 - 174
Target Start/End: Complemental strand, 36772471 - 36772300
Alignment:
Q  5 gatcttggagtttgcttctccagaggtctcaggttcgattcttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacgga 104  Q
    |||||||||||||||| ||| |||||||||||||| ||||       ||| ||||||| ||| |||||| |||||||||    ||||||||||||||||     
T  36772471 gatcttggagtttgctcctctagaggtctcaggtttgatttcccctatgccaatttcggtgggctaagttcatacagagcttgctctggctttaaacggg 36772372  T
Q  105 gcccccacaagtgggcggtgggattagtcc-atcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    ||||||   |||||||||||| ||||||||  ||| |||||||||||||| ||| |||||||||||||||||    
T  36772371 gcccccgggagtgggcggtggaattagtcctctcggattagtcgattctttgatcggataccgagttttaaa 36772300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 39145825 - 39145649
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccat-acagagtaaactctggcttta 98  Q
    |||||||||||||||||||| ||||||| ||||  ||||||||| | | |||||| ||||||| ||| ||||||| || ||||||    |||||||||||    
T  39145825 ttgggatcttggagtttgctcctccagatgtcttcggttcgattccctgtggtgccaatttcggtgggctaagtcaataacagagcttgctctggcttta 39145726  T
Q  99 aacggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    ||||| |||||  ||||||| |||||||||| || || ||||||||||||||||||| ||  |||||| |||||||||    
T  39145725 aacgg-gcccctgcaagtggacggtgggattggtcccctcgaattagtcgattcttgaatcagataccaagttttaaa 39145649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 49 - 171
Target Start/End: Original strand, 23092173 - 23092297
Alignment:
Q  49 tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcg 147  Q
    |||||| ||||||| ||| ||||||||||||||||    |||||||||||||||| |||||| ||| ||| |||||||||| || || ||| ||||||||    
T  23092173 tggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaaatggacggtgggattggtcccctcggattagtcg 23092272  T
Q  148 attcttggat-ggataccgagtttt 171  Q
    |||| ||||| ||||||||||||||    
T  23092273 attcatggatcggataccgagtttt 23092297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 171
Target Start/End: Original strand, 28089848 - 28090020
Alignment:
Q  5 gatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaact----ctggctttaa 99  Q
    |||||||||||||||| ||||||| |||||||||||||| |  | |||||  ||||||| ||| ||||||||||||| ||| | ||    ||||||||||    
T  28089848 gatcttggagtttgctcctccagatgtctcaggttcgataccctctggtgtcaatttcggtgggctaagtccatacaaagtgagcttgctctggctttaa 28089947  T
Q  100 acggagcccccacaagtgggcggtgggattagtcca-tcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    | || |||||| |||||||||| || |||| ||||  ||| |||||||||||||||||| ||||||||||||||    
T  28089948 atgg-gcccccgcaagtgggcgatgagattggtcccctcggattagtcgattcttggatcggataccgagtttt 28090020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 28646997 - 28647170
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaa-ctctggcttta 98  Q
    ||||||||||||||| ||||||||   ||||||||||||||||||  | |||||| ||||||| ||| | ||||| |||||||||    |||||||||      
T  28646997 ttgggatcttggagtgtgcttctctcaaggtctcaggttcgattccctctggtgccaatttcggtgggc-aagtcaatacagagttttgctctggcttat 28647095  T
Q  99 aacggagcccccacaagtgggcggtgggattag-tccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    ||||| ||||||||||||||||||||||||| | ||| |||||||||||  | ||||||| ||||| ||||||||    
T  28647096 aacggggcccccacaagtgggcggtgggattggttccctcgaattagtctgtccttggatcggatatcgagtttt 28647170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 13332596 - 13332495
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| |||| |||||||||||| ||||| | | ||| || ||||||| ||| ||||||||||||||||   |||||||||||||    
T  13332596 ttgggatcttggagtttgctcctcctgaggtctcaggtacgattccctctggagccaatttcggtgggctaagtccatacagagcttactctggctttaa 13332497  T
Q  100 ac 101  Q
    ||    
T  13332496 ac 13332495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 170
Target Start/End: Original strand, 22638404 - 22638488
Alignment:
Q  88 ctctggctttaaacggagcccccacaagtgggcggtgggattagtc-catcgaattagtcgattcttggat-ggataccgagttt 170  Q
    |||||||||||||||| ||| || ||||||||||||||||||  || | |||||||||||||||||||||| |||||||||||||    
T  22638404 ctctggctttaaacggggcctccgcaagtgggcggtgggattgatctcctcgaattagtcgattcttggatcggataccgagttt 22638488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 174
Target Start/End: Original strand, 27704034 - 27704205
Alignment:
Q  5 gatcttggagtttgcttctccagaggtctcaggttcga-ttcttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacgg 103  Q
    ||||||| |||||||| || |||||||||||||||||| ||| |||||||| ||||||| ||| ||||||||||| ||||    || |||||||||| ||    
T  27704034 gatcttgaagtttgctcctacagaggtctcaggttcgatttcctttggtgccaatttcggtgggctaagtccatagagagcttgctttggctttaaatgg 27704133  T
Q  104 agcccccacaagtgggcggtgggatt-agtccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    | ||||| |||||||| |||| |||| |  || ||  ||||||||||||||| ||  ||||||||||||||||    
T  27704134 a-cccccgcaagtgggtggtgtgattgatcccctcagattagtcgattcttgaatcagataccgagttttaaa 27704205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 174
Target Start/End: Original strand, 28950911 - 28951075
Alignment:
Q  13 agtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacggagccccca 111  Q
    |||||||| || |||||||||||||||||| ||  | |||||| ||||||| ||| |||||| |||| ||||    ||||||||||||||||  ||| |     
T  28950911 agtttgctccttcagaggtctcaggttcgactccctctggtgccaatttcggtgggctaagttcatatagagcttgctctggctttaaacgggtccctcg 28951010  T
Q  112 caagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    ||||| |||||||||||| || || ||||| ||| | |||||||||| |||||||||||||||||    
T  28951011 caagtcggcggtgggattggtcccctcgaactagacaattcttggatcggataccgagttttaaa 28951075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 9718152 - 9718005
Alignment:
Q  9 ttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacggagcc 107  Q
    |||||||||||| ||||| | |||||| |||||||||  | |||||  ||||||||||| ||||||||||| ||||    |||||||||||||||| |||    
T  9718152 ttggagtttgctcctccaaaagtctcaagttcgattccctctggtgtcaatttcgatgggctaagtccatagagagcttgctctggctttaaacggggcc 9718053  T
Q  108 cccacaagtgggcggtgggattagtc-catcgaattagtcgattcttg 154  Q
    | ||||| || ||||||| ||| ||| | |||||||||||| ||||||    
T  9718052 ctcacaaatgagcggtggaattggtctcctcgaattagtcggttcttg 9718005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 25333447 - 25333489
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgat 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  25333447 ttgggatcttggagtttgcttctccagaggtctcaggttcgat 25333489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 51 - 170
Target Start/End: Original strand, 9683905 - 9684026
Alignment:
Q  51 gtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgat 149  Q
    |||| ||||||| ||| |||||||||||| |||   ||||||||||||||||| | ||||||||||||||||| ||||  || || ||| |||| |||||    
T  9683905 gtgccaatttcggtgggctaagtccataccgagcttactctggctttaaacggggtccccacaagtgggcggtaggataggtcccctcggattaatcgat 9684004  T
Q  150 tcttggatgga-taccgagttt 170  Q
    |||||||| || ||||||||||    
T  9684005 tcttggatcgattaccgagttt 9684026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 23854424 - 23854469
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattct 46  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  23854424 ttgggatcttggagtttgctcctccagaggtctcaggttcgattct 23854469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 43785472 - 43785303
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||| ||| ||||| ||||| |||||||| |||||||||    | |||| ||||||  ||||||||||||||||||||   ||||||| |||||    
T  43785472 ttgggatctttgagattgctcctccaaaggtctcaagttcgattcccacttgtgctaatttcagtggactaagtccatacagagcttactctggttttaa 43785373  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgag 167  Q
    |||| ||| || ||||||| ||||| |||| || || | | ||||||||||| |||||| ||||||||||    
T  43785372 acggggcctccgcaagtggacggtgagattggtccccttggattagtcgatttttggatcggataccgag 43785303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 7800005 - 7799961
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattc 45  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  7800005 ttgggatcttggagtttgctcctccagaggtctcaggttcgattc 7799961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 171
Target Start/End: Complemental strand, 31712988 - 31712902
Alignment:
Q  87 actctggctttaaacggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    ||||||||||||| |||  ||| | |||||||||||||||||| || || ||| |||||||||||||||||| ||||||||||||||    
T  31712988 actctggctttaagcgggaccctcgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 31712902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 22299877 - 22299921
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattc 45  Q
    |||||||||||||||||||| |||||||||||||| |||||||||    
T  22299877 ttgggatcttggagtttgctcctccagaggtctcaagttcgattc 22299921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 32849619 - 32849791
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||| |||| |||| | | | ||   ||||| | ||| ||||||||| || |||    ||||||||||||    
T  32849619 ttgggatcttggagtttgctcctccagaggtctcgggtttgattccctctagtctcaattttggtgggctaagtccacactgagcttgctctggctttaa 32849718  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagttt 170  Q
    | ||  | |||| |||||||| |||||||| || || ||  |||||||||||||||||| |||||||||||||    
T  32849719 atgggactcccataagtgggcagtgggattggtcccctcagattagtcgattcttggatcggataccgagttt 32849791  T

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Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 174
Target Start/End: Original strand, 25333517 - 25333606
Alignment:
Q  86 aactctggctttaaacggagcccccacaagtgggcggtgggattagtcca-tcgaattagtcgattcttggatggataccgagttttaaa 174  Q
    ||||||| |||||||| |  ||||| ||||||||| |||||||| ||||  ||| |||||||||||||||||| |  |||||||||||||    
T  25333517 aactctgactttaaacaggccccccgcaagtgggcagtgggattggtcccctcggattagtcgattcttggatcggaaccgagttttaaa 25333606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 14199839 - 14199795
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattc 45  Q
    |||| |||||||||||| || ||||||||||||||||||||||||    
T  14199839 ttggaatcttggagtttcctcctccagaggtctcaggttcgattc 14199795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 42814892 - 42814972
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccataca 80  Q
    |||||||||||||||||||| |||  || ||||||||||||||| | | |||||  ||||||| ||| |||||||||||||    
T  42814892 ttgggatcttggagtttgctcctcttgaagtctcaggttcgattccctctggtgtcaatttcggtgggctaagtccataca 42814972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 134
Target Start/End: Original strand, 21373789 - 21373872
Alignment:
Q  51 gtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacggagcccccacaagtgggcggtgggattagtcc 134  Q
    |||| ||||||| ||| ||||||| ||||||||    |||||||||||||||| |||||| ||||||| ||||| |||| ||||    
T  21373789 gtgccaatttcggtgggctaagtctatacagagcttgctctggctttaaacggggcccccgcaagtggacggtgagattggtcc 21373872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 22643447 - 22643381
Alignment:
Q  68 ctaagtccatacagagtaaactctggctttaaacggagcccccacaagtgggcggtgggattagtcc 134  Q
    ||||||||||||||||    ||||| ||||||||||||||| | ||||||| ||||| |||||||||    
T  22643447 ctaagtccatacagagcttgctctgactttaaacggagccctcgcaagtggccggtgtgattagtcc 22643381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 21370625 - 21370669
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattc 45  Q
    ||||||||||||||||| || || |||| ||||||||||||||||    
T  21370625 ttgggatcttggagtttactccttcagatgtctcaggttcgattc 21370669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 31713068 - 31713032
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcagg 37  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  31713068 ttgggatcttggagtttgctcctcgagaggtctcagg 31713032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 4e-41; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 4718673 - 4718846
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| || |||||||||||||||||||| | | |||||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  4718673 ttgggatcttggagtttgctccttcagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 4718772  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| |||||| |||||||||||||||||| || || ||| |||||||||||||||||| ||||||||||||||    
T  4718773 acggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 4718846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 34237828 - 34237655
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | | |||||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  34237828 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 34237729  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| |||||| |||||| ||||||||||| || || ||| |||||||||||||||||| ||||||||||||||    
T  34237728 acggggcccccgcaagtgagcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 34237655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 21603258 - 21603434
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||| ||||||||| ||||||||||||||||||||||| | | |||||| ||||||| ||| ||||| ||||||||||    ||||||||||||    
T  21603258 ttgggatcttagagtttgctcctccagaggtctcaggttcgattccctatggtgccaatttcggtgggctaagcccatacagagcttgctctggctttaa 21603357  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    |||| |||||| |||||||||||||||||| || || ||| |||||||||||||||||| |||||||||||||||||    
T  21603358 acggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttaaa 21603434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 28193502 - 28193674
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | | |||||| ||||||| |||  |||||||||||||||    ||||||||||||    
T  28193502 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggttaagtccatacagagcttgctctggctttaa 28193601  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagttt 170  Q
    |||| ||||| ||||||||||||||||||| || || ||| |||||||||||||||||| |||||||||||||    
T  28193602 acggggcccctacaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 28193674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 20469945 - 20470120
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||||  | | | || ||||| ||||| ||||||||||||||||    ||||||||||||    
T  20469945 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctagagccaatttagatgggctaagtccatacagagcttgctctggctttaa 20470044  T
Q  100 acggagcccccacaagtgggcggtgggattagtccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    || |||||||| |||||||||||||||||| || | ||| ||||||||||| |||||| |||||||||||||||||    
T  20470045 acagagcccccgcaagtgggcggtgggattggttcctcggattagtcgatttttggatcggataccgagttttaaa 20470120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 20305936 - 20306109
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||| ||||||||| ||||| ||||||||| |||||||| || |||||| ||||||||||| ||||||||||||||||    ||||||||||||    
T  20305936 ttgggatcttagagtttgctcctccaaaggtctcagtttcgattccttctggtgccaatttcgatgggctaagtccatacagagcttgctctggctttaa 20306035  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    ||||  ||||| |||||||||||||||||| || || |||||||||||||| ||||||| ||||||||||||||    
T  20306036 acgggacccccgcaagtgggcggtgggattggtcccctcgaattagtcgatccttggatcggataccgagtttt 20306109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 21092569 - 21092742
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||| ||||||||| ||||| ||||||||| |||||||| || |||||| ||||||||||| ||||||||||||||||    ||||||||||||    
T  21092569 ttgggatcttagagtttgctcctccaaaggtctcagtttcgattccttctggtgccaatttcgatgggctaagtccatacagagcttgctctggctttaa 21092668  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    ||||  ||||| |||||||||||||||||| || || |||||||||||||| ||||||| ||||||||||||||    
T  21092669 acgggacccccgcaagtgggcggtgggattggtcccctcgaattagtcgatccttggatcggataccgagtttt 21092742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 39349284 - 39349457
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | | |||||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  39349284 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 39349383  T
Q  100 acggagcccccacaagtgggcggtgggatt-agtccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| |||||| |||||||||||||||||| |  || ||| |||||||||||||||||| ||||||| ||||||    
T  39349384 acggggcccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggatcggataccaagtttt 39349457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 2618214 - 2618387
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||  ||||||||||  | |||||| ||||||  ||| ||||||||||||||||    ||||||||||||    
T  2618214 ttgggatcttggagtttgctcctccagaggtcttgggttcgattccctctggtgccaatttcagtgggctaagtccatacagagcttgctctggctttaa 2618313  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    ||||||||||| |||||||||||||||||| || || ||| |||||||||||||||||| |||| |||||||||    
T  2618314 acggagcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggattccgagtttt 2618387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 3734796 - 3734623
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||| ||||||||||||||||| | | |||||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  3734796 ttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 3734697  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| |||||| ||| ||||| |||||||| || || ||| |||||||||||||||||| ||||||||||||||    
T  3734696 acggggcccccgcaaatgggcagtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 3734623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 171
Target Start/End: Complemental strand, 8765695 - 8765526
Alignment:
Q  5 gatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacgg 103  Q
    |||||||||||||||| | |||||| |||||||||||||||  | |||||| ||||||||||| ||||||||||||||||    ||||||||||||||||    
T  8765695 gatcttggagtttgctcccccagagatctcaggttcgattccctctggtgccaatttcgatgggctaagtccatacagagcttgctctggctttaaacgg 8765596  T
Q  104 agcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
     || ||| |||||||||||||||||| || || ||| |||||||||||||||||| ||||||||||||||    
T  8765595 ggctcccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 8765526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 15259579 - 15259407
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    ||||||||||||| |||||| ||||||||||||||||||||||| | | |||||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  15259579 ttgggatcttggattttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 15259480  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagttt 170  Q
    |||| |||||| |||||||||||||  ||| || || |||||||||||||||||||||| |||| ||||||||    
T  15259479 acggggcccccgcaagtgggcggtgtaattggtcccctcgaattagtcgattcttggatcggatgccgagttt 15259407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 14632982 - 14633155
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | | |||||| ||||||| ||| ||||||| ||||||||    |||||||||| |    
T  14632982 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtctatacagagcttgctctggctttga 14633081  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||||||  ||||||||||||||||||||| || || | | |||||||||||||||||| ||||||| ||||||    
T  14633082 acggagcgtccacaagtgggcggtgggattggtccccttggattagtcgattcttggatcggataccaagtttt 14633155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 32879307 - 32879480
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||| ||||||| | ||||||||||||||||||||||| | | |||||| ||||||| ||| |||||| |||||||||    ||||| | ||||    
T  32879307 ttgggatcttcgagtttggtcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagttcatacagagcttgctctgacattaa 32879406  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttgga-tggataccgagtttt 171  Q
    |||| ||||||||||||||||||||||||| || || ||| ||||||||||||||||| |||||||||||||||    
T  32879407 acggggcccccacaagtgggcggtgggattggtcccctcggattagtcgattcttggattggataccgagtttt 32879480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 42328033 - 42328205
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    ||||||||||||||||| || |||||||||| ||||||| |||||  | || ||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  42328033 ttgggatcttggagttt-ctcctccagaggtgtcaggtttgattccctctgttgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 42328131  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| |||||||||||||| || ||||||| || || |||||||||||||||||||||| ||||||||||||||    
T  42328132 acggggcccccacaagtggacgatgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 42328205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 19471637 - 19471811
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| |||||||||||||||||| |||| | | |||||| ||||| | ||  ||||||||||||||||    ||||||||||||    
T  19471637 ttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtgccaattttggtgagctaagtccatacagagcttgctctggctttaa 19471736  T
Q  100 acggag-cccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| | ||||| |||||||||| ||||||| || || |||||||||||||| ||||||| ||||||||||||||    
T  19471737 acggggccccccgcaagtgggcgatgggattggtcccctcgaattagtcgatacttggatcggataccgagtttt 19471811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 19542561 - 19542735
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| |||||||||||||||||| |||| | | |||||| ||||| | ||  ||||||||||||||||    ||||||||||||    
T  19542561 ttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtgccaattttggtgagctaagtccatacagagcttgctctggctttaa 19542660  T
Q  100 acggag-cccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| | ||||| |||||||||| ||||||| || || |||||||||||||| ||||||| ||||||||||||||    
T  19542661 acggggccccccgcaagtgggcgatgggattggtcccctcgaattagtcgatacttggatcggataccgagtttt 19542735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 19590135 - 19589961
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| |||||||||||||||||| |||| | | |||||| ||||| | ||  ||||||||||||||||    ||||||||||||    
T  19590135 ttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtgccaattttggtgagctaagtccatacagagcttgctctggctttaa 19590036  T
Q  100 acggag-cccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| | ||||| |||||||||| ||||||| || || |||||||||||||| ||||||| ||||||||||||||    
T  19590035 acggggccccccgcaagtgggcgatgggattggtcccctcgaattagtcgatacttggatcggataccgagtttt 19589961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 42643291 - 42643117
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||| ||||||| | | | |||| ||||||| ||| ||||||||||||||||    ||||| ||| ||    
T  42643291 ttgggatcttggagtttgctcctccagaggtctcagattcgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctgtcttgaa 42643192  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttta 172  Q
    |||| | |||| |||||||||||||||||| || || ||| |||||| ||||||||||| |||||||||||||||    
T  42643191 acgggggccccgcaagtgggcggtgggattggtcccctcgcattagttgattcttggatcggataccgagtttta 42643117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 4698896 - 4698723
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| || |||||||||||||||||||||  | |||||  ||||||| ||| ||||||||||  |||     ||||||||||||    
T  4698896 ttgggatcttggagtttgctccttcagaggtctcaggttcgattccctctggtgtcaatttcggtgggctaagtccatgaagaacttgctctggctttaa 4698797  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttgga-tggataccgagtttt 171  Q
    ||||||||||| |||||| ||||||||||| || || ||| |||||||||||| |||| |||||||||||||||    
T  4698796 acggagcccccgcaagtgagcggtgggattggtcccctcggattagtcgattcatggattggataccgagtttt 4698723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 28 - 174
Target Start/End: Complemental strand, 6953153 - 6953005
Alignment:
Q  28 aggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacggagcccccacaagtgggcggtggg 126  Q
    ||||||||||||||||||  | |||||| ||||||| ||| ||||||||||||||||    |||||||||||||| | |||||| ||||| |||||||||    
T  6953153 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacagggcccccgcaagttggcggtggg 6953054  T
Q  127 attagtccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    ||| |||| ||| |||||||||||||||||| | |||||||||||||||    
T  6953053 attggtccctcggattagtcgattcttggatcgaataccgagttttaaa 6953005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 27746508 - 27746350
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||| ||||||||||||||||| | |||||||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  27746508 ttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctttggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 27746409  T
Q  100 acggagcccccacaagt-gggcggtgggattagt-ccatcgaattagtcgattcttggat 157  Q
    | || | |||||||||| ||||| ||| |||||| || ||| ||||||||||||||||||    
T  27746408 aagg-ggccccacaagtggggcgatggaattagtcccctcggattagtcgattcttggat 27746350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 264572 - 264397
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||| ||||||||| |||||||| |||||||||||||| | | | |||| ||||||| ||| ||||||| ||||| ||    ||||||||||||    
T  264572 ttgggatcttcgagtttgctcctccagagatctcaggttcgattccctctagtgccaatttcggtgggctaagtctatacatagcttgctctggctttaa 264473  T
Q  100 acggagcccccacaagtgggcggtgggatt-agtccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    |||| |||||||||| ||||||||| |||| |  || |||||||||||||||||||||| ||||||||| |||||||    
T  264472 acgg-gcccccacaaatgggcggtgagattgatcccctcgaattagtcgattcttggatcggataccgaattttaaa 264397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 651349 - 651524
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||| ||||||||| |||||||| |||||||||||||| | | | |||| ||||||| ||| ||||||| ||||| ||    ||||||||||||    
T  651349 ttgggatcttcgagtttgctcctccagagatctcaggttcgattccctctagtgccaatttcggtgggctaagtctatacatagcttgctctggctttaa 651448  T
Q  100 acggagcccccacaagtgggcggtgggatt-agtccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    |||| |||||||||| ||||||||| |||| |  || |||||||||||||||||||||| ||||||||| |||||||    
T  651449 acgg-gcccccacaaatgggcggtgagattgatcccctcgaattagtcgattcttggatcggataccgaattttaaa 651524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 837084 - 837259
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||| ||||||||| |||||||| |||||||||||||| | | | |||| ||||||| ||| ||||||| ||||| ||    ||||||||||||    
T  837084 ttgggatcttcgagtttgctcctccagagatctcaggttcgattccctctagtgccaatttcggtgggctaagtctatacatagcttgctctggctttaa 837183  T
Q  100 acggagcccccacaagtgggcggtgggatt-agtccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    |||| |||||||||| ||||||||| |||| |  || |||||||||||||||||||||| ||||||||| |||||||    
T  837184 acgg-gcccccacaaatgggcggtgagattgatcccctcgaattagtcgattcttggatcggataccgaattttaaa 837259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 21667578 - 21667731
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||| ||||||||| ||||| ||||| || | |||||||||||| | |||||||| ||||||| ||| ||||||||||||||||    ||||| ||||||    
T  21667578 ttggaatcttggaggttgctcctccaaagatttcaggttcgatttcctttggtgctaatttcggtgggctaagtccatacagagcttgctctgcctttaa 21667677  T
Q  100 acggagcccccacaagtgggcggtgggattagtccatcgaattagtcgattctt 153  Q
    |||||||  || |||||||||||||| ||| |||| ||  ||||||||||||||    
T  21667678 acggagcatccgcaagtgggcggtggaattggtccctcagattagtcgattctt 21667731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 2166727 - 2166900
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaa 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||   | |||| ||||||  | | ||||||||||||||||    |||||||||||||    
T  2166727 ttgggatcttggagtttgcttctccaaaggtctcaggttcgattc-cctcgtgccaatttcagtaggctaagtccatacagagcttgctctggctttaaa 2166825  T
Q  101 cggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttgga-tggataccgagttttaaa 174  Q
       || |||| |||||||||||||||||| || || ||  ||||||||||| || || ||||||||||||||||||    
T  2166826 -taagaccccgcaagtgggcggtgggattggtcccctcagattagtcgattttttgattggataccgagttttaaa 2166900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 88 - 171
Target Start/End: Complemental strand, 2639496 - 2639411
Alignment:
Q  88 ctctggctttaaacggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||||||||||||||| |||||| |||||||||||||||||| || || ||| |||||||||||||||||| ||||||||||||||    
T  2639496 ctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 2639411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 18532135 - 18532299
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | |  | ||  ||||||| ||| |||||||||||||||     |||||| |||||    
T  18532135 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctcagatgtcaatttcggtgggctaagtccatacagaacttgctctggatttaa 18532234  T
Q  100 acggagcccccacaagtgggcggtgggattagtccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| |||||  ||||||||||||| ||||        | |||||||||||||||||| ||||||||||||||    
T  18532235 acggggcccctgcaagtgggcggtgagatt--------ggattagtcgattcttggatcggataccgagtttt 18532299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 88 - 171
Target Start/End: Original strand, 10292170 - 10292255
Alignment:
Q  88 ctctggctttaaacggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||||||||||||||| ||||||||||||||||||||||||| || || ||| |||||| ||||||||||| | ||||||||||||    
T  10292170 ctctggctttaaacggggcccccacaagtgggcggtgggattggtcccttcggattagttgattcttggatcgaataccgagtttt 10292255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 28088314 - 28088443
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||| |  |||||||||||||| ||||||| | |||||||  ||||||| |||  |||||||||||||||    ||||| ||||||    
T  28088314 ttgggatcttggagtttgttcatccagaggtctcagattcgattccctttggtgtcaatttcggtgggttaagtccatacagagcttgctctgactttaa 28088413  T
Q  100 acggagcccccacaagtgggcggtgggatt 129  Q
    | || ||| || ||||||||||||||||||    
T  28088414 atggggcctccgcaagtgggcggtgggatt 28088443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 171
Target Start/End: Complemental strand, 34610857 - 34610687
Alignment:
Q  4 ggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacg 102  Q
    |||| |||||||||| |  |||||| |||| |||||||||||  | || ||| ||||||| ||| ||||||| ||||||||    |||||||||||||||    
T  34610857 ggattttggagtttgttcatccagatgtctgaggttcgattccctctgatgccaatttcggtggtctaagtctatacagagcttgctctggctttaaacg 34610758  T
Q  103 gagcccc-cacaagtgggcggtgggattagtcca-tcgaattagtcgattcttggat-ggataccgagtttt 171  Q
     |||||| | |||||||||||| | ||| ||||  |||||||||||||||||||||| ||||||||||||||    
T  34610757 -agcccctcgcaagtgggcggtagaattggtcccctcgaattagtcgattcttggatcggataccgagtttt 34610687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 24018410 - 24018568
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcga-ttcttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||| |||||| |||||||| ||| | |  ||  ||||||  ||| ||||||||||||||||    ||||||||||||    
T  24018410 ttgggatcttggagtttgctcctccaaaggtctgaggttcgatttcctctaatgtcaatttcagtgggctaagtccatacagagcttgctctggctttaa 24018509  T
Q  100 acggagc-ccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttgga 156  Q
    ||||  | |||||||||||||||||| |||| || || | |||||||||| ||||||||    
T  24018510 acgggcctccccacaagtgggcggtgagattggtccccttgaattagtcggttcttgga 24018568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 153
Target Start/End: Original strand, 28964065 - 28964214
Alignment:
Q  5 gatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacgg 103  Q
    |||||| ||||||||| |||   |||| ||| |||||||||  | |||||| ||||||| ||| |||||||||||| |||  |  |||||||||||||||    
T  28964065 gatcttagagtttgctcctcttaaggtttcatgttcgattccatctggtgccaatttcggtgggctaagtccatacggagctatgtctggctttaaacgg 28964164  T
Q  104 agcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattctt 153  Q
     |||||| ||||||||| |||||||| || || ||||||||||||||||||    
T  28964165 ggcccccgcaagtgggc-gtgggattggtcccctcgaattagtcgattctt 28964214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 88 - 174
Target Start/End: Original strand, 18128629 - 18128717
Alignment:
Q  88 ctctggctttaaacggagcccccacaagtgggcggtgggattagtcc-atcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    |||||||||||||||| |||||| |||||||||||||||||| ||||  ||  |||||||| ||||||||| | |||||||||||||||    
T  18128629 ctctggctttaaacggggcccccgcaagtgggcggtgggattggtcctctcagattagtcggttcttggatcgaataccgagttttaaa 18128717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 174
Target Start/End: Original strand, 25248407 - 25248550
Alignment:
Q  31 tctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacggagcccccacaagtgggcggtgggatt 129  Q
    |||||||||||||||  | |||||  ||||||| | | ||||||| |||||||||   |||||||||||||||| |||| | ||||||||||||||||||    
T  25248407 tctcaggttcgattccctctggtgtcaatttcggtaggctaagtc-atacagagtttgctctggctttaaacgg-gccctcgcaagtgggcggtgggatt 25248504  T
Q  130 agt-ccatcgaattagtcgattcttggatggataccgagttttaaa 174  Q
     || || ||| ||||||||||| |||   |||||||||||||||||    
T  25248505 ggtcccctcggattagtcgatttttgatcggataccgagttttaaa 25248550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 171
Target Start/End: Complemental strand, 9047387 - 9047279
Alignment:
Q  64 tggactaagtccatacagagtaaactctggctttaaacggagcccccacaagtgggcggtgggattagtccatcgaattagtcgattcttggat-ggata 162  Q
    ||||||||||||||||| ||   |||||| ||||||||||| ||||| || |||| | |||| ||| |||| | |||||||||| ||||||||| |||||    
T  9047387 tggactaagtccatacaaagcttactctgactttaaacggaacccccgcatgtggacagtggaattggtcccttgaattagtcggttcttggatcggata 9047288  T
Q  163 ccgagtttt 171  Q
    |||| ||||    
T  9047287 ccgaatttt 9047279  T

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Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 170
Target Start/End: Complemental strand, 7558034 - 7557952
Alignment:
Q  89 tctggctttaaacggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagttt 170  Q
    |||||||||||||||| ||||| ||||||| |||||||||| || || ||||||||||||||| ||| || |||||||||||||    
T  7558034 tctggctttaaacgga-cccccgcaagtggacggtgggattggtcccctcgaattagtcgatttttgcatcggataccgagttt 7557952  T

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Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 129
Target Start/End: Original strand, 24999289 - 24999391
Alignment:
Q  28 aggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacggagcccccacaagtgggcggtggg 126  Q
    |||||| |||||||||||  | || ||| ||||| ||||| |||||| |||| ||||    |||||||||||||||| |||||| |||||||||||||||    
T  24999289 aggtcttaggttcgattccctctgatgccaattttgatgggctaagttcatatagagcttgctctggctttaaacggggcccccgcaagtgggcggtggg 24999388  T
Q  127 att 129  Q
    |||    
T  24999389 att 24999391  T

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Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 134
Target Start/End: Complemental strand, 36848873 - 36848789
Alignment:
Q  49 tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacggagcccccacaagtgggcggtgggattagtcc 134  Q
    |||||| ||||||| ||| |||||||||||| ||||   ||| ||||||||| | || | ||||||||||||||||||||||||||    
T  36848873 tggtgccaatttcggtgggctaagtccatacggagtttgctcgggctttaaatg-aggcaccacaagtgggcggtgggattagtcc 36848789  T

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Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 7558116 - 7558041
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcga-ttcttttggtgcgaatttcgatggactaagtcc 75  Q
    |||||||||||||||||||| ||||||| ||||||| ||||| ||| | |||||| ||||| | ||| ||||||||    
T  7558116 ttgggatcttggagtttgctcctccagaagtctcagattcgatttcctctggtgccaattttggtgggctaagtcc 7558041  T

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Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 153
Target Start/End: Original strand, 1219445 - 1219531
Alignment:
Q  68 ctaagtccatacagagtaaactctggctttaaacggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattctt 153  Q
    ||||||||||||||| |    ||||||||||||||| ||||||| ||||||||||| ||||  || || ||| ||||||||||||||    
T  1219445 ctaagtccatacagaatttgttctggctttaaacggggcccccataagtgggcggtaggatcggtcccttcggattagtcgattctt 1219531  T

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Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 8042682 - 8042724
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgat 43  Q
    |||||||||||||||||||| ||||| | ||||||||||||||    
T  8042682 ttgggatcttggagtttgctcctccaaaagtctcaggttcgat 8042724  T

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Target: chr6 (Bit Score: 86; Significance: 4e-41; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 11448895 - 11449068
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattct-tttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| | |||||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  11448895 ttgggatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 11448994  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| |||||| |||||||||||||||||| || || ||| ||||||||||||||| || ||||| ||||||||    
T  11448995 acggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggatatcgagtttt 11449068  T

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Target: chr6; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 654319 - 654146
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | | |||||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  654319 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 654220  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| || ||| |||||||||||||||||| || || ||| ||||||||||| |||||| ||||||||||||||    
T  654219 acggggctcccgcaagtgggcggtgggattggtcccctcggattagtcgattattggatcggataccgagtttt 654146  T

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Target: chr6; HSP #3
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 5360244 - 5360071
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||||||| ||||||||||||||||||||  | |  ||| ||||||| ||| ||||||||||||||||    ||||| ||||||    
T  5360244 ttgggatcttggagtttgcttctcaagaggtctcaggttcgattccctctaatgccaatttcggtgggctaagtccatacagagcttgctctgactttaa 5360145  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    ||||| |||||||||||||||||||||||| || || |||||||||||||||||| ||| ||||||||||||||    
T  5360144 acggaacccccacaagtgggcggtgggattggtcccctcgaattagtcgattcttagatcggataccgagtttt 5360071  T

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Target: chr6; HSP #4
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 15360271 - 15360098
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||| ||||||||||||||||| | | |||||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  15360271 ttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 15360172  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| |||||| ||| |||||||||||||| || || ||| |||||||||||||||||| ||||||||||||||    
T  15360171 acggggcccccgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 15360098  T

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Target: chr6; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 21982493 - 21982321
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    ||||||||||| |||||||| |||||||||||| |||||||||||    |||||| ||||||  ||| ||||||||||||||||    ||||||||||||    
T  21982493 ttgggatcttgaagtttgctcctccagaggtctgaggttcgattcccgatggtgccaatttcagtgggctaagtccatacagagcttgctctggctttaa 21982394  T
Q  100 acggagcccccacaagtgggcggtgggattagtccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| |||||| |||||||||||||||||| |||| ||| |||||||||||||||||| ||||||||||||||    
T  21982393 acggggcccccgcaagtgggcggtgggattggtccctcggattagtcgattcttggatcggataccgagtttt 21982321  T

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Target: chr6; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 34147370 - 34147543
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    ||||||||||||||||||||  |||||| ||||||||||||||| | | |||||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  34147370 ttgggatcttggagtttgctcttccagaagtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 34147469  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    ||||  ||||| |||||||||||||||||| || || ||| |||||||||||||||||| ||||||||||||||    
T  34147470 acgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 34147543  T

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Target: chr6; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 34159986 - 34160159
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    ||||||||||||||||||||  |||||| ||||||||||||||| | | |||||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  34159986 ttgggatcttggagtttgctcttccagaagtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 34160085  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    ||||  ||||| |||||||||||||||||| || || ||| |||||||||||||||||| ||||||||||||||    
T  34160086 acgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 34160159  T

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Target: chr6; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 9238999 - 9239171
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | | |||||| ||||||| |||  |||||||||| ||||    || |||||||||    
T  9238999 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggttaagtccatatagagcttgctttggctttaa 9239098  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagttt 170  Q
    | || |||||| |||||||||||||||||| || || ||| |||||||||||||||||| |||||||||||||    
T  9239099 atggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 9239171  T

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Target: chr6; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 9 - 174
Target Start/End: Complemental strand, 9690803 - 9690635
Alignment:
Q  9 ttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacggagcc 107  Q
    ||||||||||||  ||||||||||| |||||||||| ||| | |||  ||||||| ||| ||||||||||||||||    |||||||||||||||| |||    
T  9690803 ttggagtttgctcttccagaggtcttaggttcgatttcttctagtgtcaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcc 9690704  T
Q  108 cccacaagtgggcggtgggattagtcc-atcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    | ||||||||| |||||||||| ||||  ||| |||||||||||||||||| |||||||||||||||||    
T  9690703 ctcacaagtggacggtgggattggtcctctcggattagtcgattcttggatcggataccgagttttaaa 9690635  T

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Target: chr6; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 3222807 - 3222636
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    ||||||||||| |||||||| ||| ||||||||||||||||||||  | |||||| ||||||| ||| ||||||||||||||||    ||||| ||||||    
T  3222807 ttgggatcttgcagtttgctcctc-agaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctgtctttaa 3222709  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| | |||| |||||||||||||||||| || || ||| |||||||||||||||||| ||||||||||||||    
T  3222708 acgg-ggccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 3222636  T

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Target: chr6; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 21148683 - 21148511
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    ||||||||||||||||||||| | ||||||||||| |||||||| | | | |||| ||||||||||| ||||||||||||||||    ||||| ||||||    
T  21148683 ttgggatcttggagtttgctttttcagaggtctcaagttcgattccctctagtgccaatttcgatgggctaagtccatacagagcttgctctgactttaa 21148584  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| | |||| |||||||||||||||||| || || ||| ||||||||||||||| || ||||||||||||||    
T  21148583 acgg-ggccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggataccgagtttt 21148511  T

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Target: chr6; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 171
Target Start/End: Original strand, 1344960 - 1345132
Alignment:
Q  2 tgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaa 100  Q
    ||||||||||||||||| | ||||||||||||||||||||||| | | |||||| ||||||  ||| ||||||||||||| ||    |||||||||||||    
T  1344960 tgggatcttggagtttgttcctccagaggtctcaggttcgattccctctggtgccaatttcagtgggctaagtccatacaaagcttgctctggctttaaa 1345059  T
Q  101 cggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||  ||||| ||||||| |||||||||| || || | | |||||||||||||||||| ||||||||||||||    
T  1345060 cgggccccccgcaagtggacggtgggattggtccccttggattagtcgattcttggatcggataccgagtttt 1345132  T

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Target: chr6; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 9843962 - 9844135
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcga-ttcttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||| ||||||||||||||||| ||| | |||||  ||||| | |||  |||||||||||||||     |||||||||||    
T  9843962 ttgggatcttggagtttgctcctctagaggtctcaggttcgacttcctctggtgtcaattttggtgggttaagtccatacagagcttgttctggctttaa 9844061  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| |||||| ||||||||||||| |||| || || ||| |||||||||||||||||| ||||| ||||||||    
T  9844062 acggggccccctcaagtgggcggtgagattggtcccttcggattagtcgattcttggatcggatatcgagtttt 9844135  T

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Target: chr6; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 171
Target Start/End: Original strand, 14212918 - 14213079
Alignment:
Q  3 gggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaac 101  Q
    |||||||||||||||||| ||||||||||||||||||||||| | | |||||| ||||| ||||| ||||||||||| |||          |||||||||    
T  14212918 gggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaattttgatgggctaagtccatataga----------gctttaaac 14213007  T
Q  102 ggagcccccacaagtgggcggtgggattagtcca-tcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    || | |||| |||||||| ||||||||| ||||| ||| |||||||||||||||||| ||||||||||||||    
T  14213008 gggggccccgcaagtgggtggtgggattggtccactcggattagtcgattcttggatcggataccgagtttt 14213079  T

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Target: chr6; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 150
Target Start/End: Original strand, 12390465 - 12390600
Alignment:
Q  17 tgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacggagcccccacaag 115  Q
    |||| ||||||||||||||||||||||||  | |||||| ||||||| ||| ||||||||||||||||    |||||||||||||| | |||||| ||||    
T  12390465 tgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacagggcccccgcaag 12390564  T
Q  116 tgggcggtgggattagt-ccatcgaattagtcgatt 150  Q
    |||||||||||||| || || ||| |||||||||||    
T  12390565 tgggcggtgggattggtcccctcggattagtcgatt 12390600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 171
Target Start/End: Complemental strand, 17081224 - 17081054
Alignment:
Q  4 ggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacg 102  Q
    ||||||||||||||||| ||||||| |||||| ||| |||||  | |||||  ||||||| ||| ||||||||||||||||    ||||| ||||||| |    
T  17081224 ggatcttggagtttgctcctccagatgtctcaagtttgattccctctggtgtcaatttcggtgggctaagtccatacagagcttgctctgactttaaatg 17081125  T
Q  103 gagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    | |||||| |||||||||||||||||| || || |||||| ||| | ||||||||| | ||||||||||||    
T  17081124 gggcccccgcaagtgggcggtgggattggtcccctcgaataagttgtttcttggatcgaataccgagtttt 17081054  T

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Target: chr6; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 11007189 - 11007362
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattc-ttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||  | || |   ||||||| ||| ||||||||||||| ||    |||| |||||||    
T  11007189 ttgggatcttggagtttgctcctccaaaggtctcaggttcgattcactctgctctcaatttcggtgggctaagtccatacaaagcttgctctagctttaa 11007288  T
Q  100 acggagcccccacaagtgggcggtgggattag-tccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
     ||| |||||| |||||||||||||||||| |  || ||| |||||||||||||| ||| ||||||| ||||||    
T  11007289 gcggggcccccgcaagtgggcggtgggattggccccctcggattagtcgattctttgatcggatacctagtttt 11007362  T

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Target: chr6; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 11840925 - 11841097
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    ||||||| || || |||||| |||||||||||||||| |||||| | | |||||| ||||||| |||  |||||||||||| ||    || ||| |||||    
T  11840925 ttgggatattagaatttgctcctccagaggtctcaggctcgattccctctggtgccaatttcggtgggttaagtccatacaaagcttgctttggttttaa 11841024  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| | ||||| |||||| ||||||||||||| || ||||||||||||||| |||||| ||||||||||||||    
T  11841025 acgg-ggccccataagtggacggtgggattagtcccctcgaattagtcgattattggatcggataccgagtttt 11841097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 171
Target Start/End: Original strand, 28672095 - 28672264
Alignment:
Q  5 gatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacgg 103  Q
    |||||||||||||||| ||| |||||||| |||||||||||  | |||||  ||||| | ||| ||||||||||||||||     | |||||||||||||    
T  28672095 gatcttggagtttgctcctctagaggtcttaggttcgattccctctggtgtcaattttggtgggctaagtccatacagagcttgttttggctttaaacgg 28672194  T
Q  104 agcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
      ||| | |||||||||||||||||| || || ||| ||||||||||||||||||  |||||||||||||    
T  28672195 gcccctcgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcagataccgagtttt 28672264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 33718631 - 33718547
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattct-tttggtgcgaatttcgatggactaagtccatacagagt 84  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||| | |||||| ||||| | || ||||||| ||||||||||    
T  33718631 ttgggatcttggagtttacttctccagagatctcaggttcgattctctctggtgcaaattttggtgaactaagtacatacagagt 33718547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 12591661 - 12591764
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||| ||||||||||||||||| | | | |||| ||||||  ||| ||||||||||||||||    ||||||||||||    
T  12591661 ttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctcgtgccaatttcagtgggctaagtccatacagagcttgctctggctttaa 12591760  T
Q  100 acgg 103  Q
    ||||    
T  12591761 acgg 12591764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 13753267 - 13753346
Alignment:
Q  4 ggatcttggagtttgcttctccagaggtctcaggttcgattct-tttggtgcgaatttcgatggactaagtccatacaga 82  Q
    ||||||||||||||||| ||||||||||||||||||| ||||| | |||||| ||||||| ||| |||| ||||||||||    
T  13753267 ggatcttggagtttgctcctccagaggtctcaggttcaattctctctggtgccaatttcggtgggctaaatccatacaga 13753346  T

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Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 174
Target Start/End: Complemental strand, 15730579 - 15730492
Alignment:
Q  89 tctggctttaaacggagcccccacaagtgggcggtgggattagtc-catcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    ||||||||||||||  ||||||||| ||||||||||||||| ||| | ||| |||||||||||||| ||| ||||| |||||||||||    
T  15730579 tctggctttaaacgtggcccccacacgtgggcggtgggattggtcacctcggattagtcgattctttgatcggatatcgagttttaaa 15730492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 9208276 - 9208452
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaa-ctctggcttta 98  Q
    |||||||||||||||||||| |||   ||||||||||||||||||    |||||| ||||||| ||| | ||||||||||||||     || ||||||||    
T  9208276 ttgggatcttggagtttgctcctctcaaggtctcaggttcgattccccctggtgccaatttcggtgggc-aagtccatacagagccttgctttggcttta 9208374  T
Q  99 aacggagcccccacaagtgggcggtgggattagtc-catcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    || || |||||| |||||||||||||||||| ||| | ||  | ||||||||||||||||   |||||||||||||||    
T  9208375 aatggggcccccgcaagtgggcggtgggattggtctcctcagaatagtcgattcttggatcaaataccgagttttaaa 9208452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 22576091 - 22576135
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattc 45  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||    
T  22576091 ttgggatcttggagtttgctcctccagaggtctcagattcgattc 22576135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 17706480 - 17706409
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaa 71  Q
    |||||||||||||||||||| ||||||| |||||| |||||||| ||| |||||  ||||||| ||||||||    
T  17706480 ttgggatcttggagtttgctcctccagaagtctcaagttcgattccttctggtgtcaatttcggtggactaa 17706409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 28968215 - 28968170
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattct 46  Q
    |||||||||||||||||||| ||| ||||||||||| |||||||||    
T  28968215 ttgggatcttggagtttgctcctctagaggtctcagattcgattct 28968170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 136
Target Start/End: Original strand, 31039100 - 31039179
Alignment:
Q  56 aatttcgatggactaagtccatacagagtaaactctggctttaaacggagcccccacaagtgggcggtgggattagtccat 136  Q
    ||||||||||| |||||||||||||||||   || ||||| | || ||| ||||||||||||||||||| |||| ||||||    
T  31039100 aatttcgatgggctaagtccatacagagtttgctatggctatgaatgga-cccccacaagtgggcggtgtgattggtccat 31039179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 157
Target Start/End: Complemental strand, 27866264 - 27866218
Alignment:
Q  112 caagtgggcggtgggattagt-ccatcgaattagtcgattcttggat 157  Q
    ||||||||||||||||||||| || ||||||||||||||| ||||||    
T  27866264 caagtgggcggtgggattagtcccctcgaattagtcgatttttggat 27866218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 171
Target Start/End: Complemental strand, 14504167 - 14504082
Alignment:
Q  88 ctctggctttaaacggagcccccacaagtgggcggtgggattagtcc-atcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||||| |||||| || | |||| ||||||||||||||||||  |||  |||||||||||||| |||| || ||||||||||||||    
T  14504167 ctctggttttaaatggggtccccgcaagtgggcggtgggattgatcctctcgaattagtcgatccttgtatcggataccgagtttt 14504082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 4e-41; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 44946226 - 44946053
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | |||||||| ||||||| ||| |||||||||||||||     ||||||||||||    
T  44946226 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttggtgccaatttcggtgggctaagtccatacagaacttgctctggctttaa 44946127  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    ||||  ||||| |||||||||||||||||| || || ||| |||||||||||||||||| ||||||||||||||    
T  44946126 acgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 44946053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 3 - 171
Target Start/End: Original strand, 15037985 - 15038156
Alignment:
Q  3 gggatcttggagtttgcttctccagaggtctcaggttcgattct-tttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaac 101  Q
    |||||||||||||||||| ||||| ||||||||||||||||||  |||||||| ||||||| ||| ||||||||||||||||    || |||||||||||    
T  15037985 gggatcttggagtttgctcctccaaaggtctcaggttcgattccctttggtgccaatttcggtgggctaagtccatacagagcttgctttggctttaaac 15038084  T
Q  102 ggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    ||||||||| |||||||||||||||||| || || ||  |||||||||||||||||| ||||||||||||||    
T  15038085 ggagcccccgcaagtgggcggtgggattggtcccctcagattagtcgattcttggatcggataccgagtttt 15038156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 17324790 - 17324964
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||| ||||||||||||||| ||||||||||||||||||||||| | | |||||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  17324790 ttggtatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 17324889  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggatggataccgagttttaaa 174  Q
    | || |||||||||||||||||||||||||||| || || ||||||||||||||||   ||||| |||||||||||    
T  17324890 atgg-gcccccacaagtgggcggtgggattagtcccctcaaattagtcgattcttgatcggatatcgagttttaaa 17324964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 11941383 - 11941207
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||| ||| | | |||||| ||||| | |||  |||||||||||||||    ||||||||||||    
T  11941383 ttgggatcttggagtttgctcctccagaggtctcaggttcaattccctatggtgccaattttggtgggttaagtccatacagagcttgctctggctttaa 11941284  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    ||||  ||||| |||||||||||||||||| || || ||| |||||||||||||||||| |||||||||||||||||    
T  11941283 acgggacccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttaaa 11941207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 33827746 - 33827573
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| | | |||||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  33827746 ttgggatcttggagattgctcctccagaggtctcaggttcgattccctctggtgccaatttcgttgggctaagtccatacagagcttgctctggctttaa 33827647  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    ||||  ||||  |||||||||||||||||| || || | | |||||||||||||||||| ||||||||||||||    
T  33827646 acgggacccctgcaagtgggcggtgggattggtccccttggattagtcgattcttggatcggataccgagtttt 33827573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 30467003 - 30466827
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattct-tttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    ||||||| |||||||||| | ||| ||||||||||||||||||||| | || ||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  30467003 ttgggatattggagtttgttcctctagaggtctcaggttcgattctctctgctgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 30466904  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    || | |||||| ||||||||| |||||||| || || ||| |||||||||||||||||| |||||||||||||||||    
T  30466903 accgggcccccgcaagtgggcagtgggattggtcccttcggattagtcgattcttggatcggataccgagttttaaa 30466827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 171
Target Start/End: Original strand, 35171831 - 35171997
Alignment:
Q  8 cttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacggagc 106  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||  | ||||||| ||| ||||||||||||||||    |||||||||||||||| ||    
T  35171831 cttggagtttgctcctccagaggtctcaggttcgattccctctggcaccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggc 35171930  T
Q  107 ccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| |||||||||||||||||| || || ||| ||||||||||||||| || ||||||||||||||    
T  35171931 ccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggataccgagtttt 35171997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 5 - 174
Target Start/End: Original strand, 19849861 - 19850032
Alignment:
Q  5 gatcttggagtttgcttctccagaggtctcaggttcgattc-ttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacgg 103  Q
    |||||||||||||||| ||||| |||||| | ||||||||| |||| |||  ||||| ||||||||||||| ||||||||    |||||||||||||| |    
T  19849861 gatcttggagtttgctcctccaaaggtcttaagttcgattccttttagtgtcaattttgatggactaagtctatacagagcttgctctggctttaaacag 19849960  T
Q  104 agcccccacaagtgggcggtgggattagtcc-atcgaattagtcgattcttggatggataccgagttttaaa 174  Q
     |||||| ||||||||||||| |||| ||||  || ||||| ||||||||||||| ||||| ||||||||||    
T  19849961 ggcccccgcaagtgggcggtgagattggtcctctcaaattaatcgattcttggatcgatactgagttttaaa 19850032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 34516581 - 34516414
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaa 100  Q
    |||||||||||||||||||| |||||||||| |||||||||||||    ||||  ||||||| ||| ||||||||||||||||    |||| ||||||||    
T  34516581 ttgggatcttggagtttgctcctccagaggtttcaggttcgattc----ggtggtaatttcggtgggctaagtccatacagagcttgctctcgctttaaa 34516486  T
Q  101 cggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    ||| |||||  |||||||||||||||||| || || ||| |||||||||||||||||| ||||||| ||||||    
T  34516485 cgg-gcccctgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccaagtttt 34516414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 44976327 - 44976172
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||| ||||||| ||||||||||||||||||||||| | | |||||| ||||| | ||| |||||||||||||||||   ||||||||||||    
T  44976327 ttgggatcttggggtttgctcctccagaggtctcaggttcgattccctctggtgccaattttggtgggctaagtccatacagagtttgctctggctttaa 44976228  T
Q  100 acggagc-ccccacaagtgggcggtgggatt-agtccatcgaattagtcgattctt 153  Q
    |||| || |||| |||||||||||||||||| |  || ||| ||||||||||||||    
T  44976227 acggggctccccgcaagtgggcggtgggattgatcccttcggattagtcgattctt 44976172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 48 - 171
Target Start/End: Original strand, 28668945 - 28669070
Alignment:
Q  48 ttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacggagcccccacaagtgggcggtgggattagt-ccatcgaattagtc 146  Q
    ||||||| ||||||| ||||||||||||||||||||    || ||||||||||||| ||||||||||||||||||||||||| || || ||| |||||||    
T  28668945 ttggtgccaatttcggtggactaagtccatacagagcttgctttggctttaaacggggcccccacaagtgggcggtgggattggtcccctcggattagtc 28669044  T
Q  147 gattcttggat-ggataccgagtttt 171  Q
    |||| |||||| ||||||||||||||    
T  28669045 gatttttggatcggataccgagtttt 28669070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 12 - 171
Target Start/End: Complemental strand, 36390730 - 36390569
Alignment:
Q  12 gagtttgcttctccagaggtctcaggttcga-ttcttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacggagccccc 110  Q
    ||||||||||||||| ||||||||||||||| ||| | |||||| ||||||| ||||||||||||||||| ||    ||||| ||||||| ||  |||||    
T  36390730 gagtttgcttctccaaaggtctcaggttcgatttcctctggtgccaatttcggtggactaagtccatacaaagcttgctctgactttaaatgggaccccc 36390631  T
Q  111 acaagtgggcggtgggattagtccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
     |||||||||||||||||| |||| ||| || ||||||| |||| || ||||||||||||||    
T  36390630 gcaagtgggcggtgggattggtccctcggatcagtcgatacttgaatcggataccgagtttt 36390569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 10582163 - 10582014
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | | |||||| ||||||| ||| ||||||||||||||||    |||| |||||||    
T  10582163 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctagctttaa 10582064  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgatt 150  Q
    |||| |||| | ||||||||| |||||||| || || |||||||||||||||    
T  10582063 acgg-gccctcgcaagtgggc-gtgggattggtcccctcgaattagtcgatt 10582014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 5 - 134
Target Start/End: Original strand, 5394045 - 5394175
Alignment:
Q  5 gatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacgg 103  Q
    |||||||||||||||| ||||| ||||||||||||||||||  | |||||  ||||||||||| |||||||||||||||||   ||||| ||||||| ||    
T  5394045 gatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgtcaatttcgatgggctaagtccatacagagtttgctctgactttaaatgg 5394144  T
Q  104 agcccccacaagtgggcggtgggattagtcc 134  Q
     ||| || |||||||||||||||||| ||||    
T  5394145 ggccgccgcaagtgggcggtgggattggtcc 5394175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 4567610 - 4567481
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    ||||||||||| |||||||| || |||| ||||||||||||||| | | |||||| ||||||| ||| |||| |||||||||||     |||||||||||    
T  4567610 ttgggatcttgaagtttgctccttcagaagtctcaggttcgatttcctctggtgccaatttcggtgggctaaatccatacagagcttgttctggctttaa 4567511  T
Q  100 acggagcccccacaagtgggcggtgggatt 129  Q
    |||| |||||||||||||||||||||||||    
T  4567510 acggggcccccacaagtgggcggtgggatt 4567481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 27290612 - 27290729
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | || ||||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  27290612 ttgggatcttggagtttgctcctccagaggtctcaggttcgattcccttcggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 27290711  T
Q  100 acggagcccccacaagtg 117  Q
    ||||  ||||| ||||||    
T  27290712 acgggccccccgcaagtg 27290729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 25293190 - 25293359
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||  | |||||| ||||||| ||| |||||| ||||         ||||||||||||    
T  25293190 ttgggatcttggagtttgctcctcgagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagttcatag--------ctctggctttaa 25293281  T
Q  100 acggag-cccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    |||| | ||||| |||||||||| ||||||| || || ||| |||||||||||||||||| |||||||||||||||||    
T  25293282 acggggccccccgcaagtgggcgatgggattggtcccctcggattagtcgattcttggatcggataccgagttttaaa 25293359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 36242485 - 36242327
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    ||||||||||| | |||||| ||||||||||||||||||||||| | | |||||  ||||||| ||| |||||||||  |||||    ||||||||||||    
T  36242485 ttgggatcttgaaatttgctcctccagaggtctcaggttcgattccctctggtgtcaatttcggtgggctaagtccagccagagcttgctctggctttaa 36242386  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat 157  Q
    |||| | |||| |||||||||||||||||| || || ||| |||| |||||||||||||    
T  36242385 acggggtccccgcaagtgggcggtgggattggtcccctcggattaatcgattcttggat 36242327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 43374498 - 43374330
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| || |||||||||||||||||||| | | |||||| ||||||| ||| ||||||  ||||| ||    |||||||||||     
T  43374498 ttgggatcttggagtttgctccttcagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtttatacaaagcttgctctggcttta- 43374400  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
        ||||||| |||||| ||||||||||| || || ||| |||||||||||||||||| ||||||||||||||    
T  43374399 ----agcccccgcaagtgagcggtgggattggtcccttcggattagtcgattcttggatcggataccgagtttt 43374330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 171
Target Start/End: Original strand, 19054053 - 19054223
Alignment:
Q  5 gatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacgg 103  Q
    ||||||||||| |||| ||||| |||||||||||| |||| ||| |||||  || |||| ||| ||||||||||||||||    || |||||||||| ||    
T  19054053 gatcttggagtctgctcctccaaaggtctcaggtttgattccttctggtgttaacttcggtgggctaagtccatacagagcttgctttggctttaaatgg 19054152  T
Q  104 -agcccccacaagtgggcggtgggattagtcc-atcgaattagtcgattcttggat-ggataccgagtttt 171  Q
     | ||||| |||||||||||||||||| ||||  ||| ||||||||||||||||||  |||||||||||||    
T  19054153 aaccccccgcaagtgggcggtgggattggtccgctcggattagtcgattcttggatcagataccgagtttt 19054223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 24196028 - 24196199
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    ||||||| |||| ||| ||| |||||||||| |||||||||||| | | |||||| ||||||| ||| |||||||||||||||     ||||||||||||    
T  24196028 ttgggattttggggttcgctcctccagaggtttcaggttcgattccctctggtgcaaatttcggtgggctaagtccatacagaacttgctctggctttaa 24196127  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttgga-tggataccgagtttt 171  Q
    |||  | |||| |||||||||||||||||| || || ||| ||||||||||| || || |||||||||||||||    
T  24196128 acg--ggccccgcaagtgggcggtgggattggtcccctcggattagtcgattttttgattggataccgagtttt 24196199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 156
Target Start/End: Original strand, 1191541 - 1191694
Alignment:
Q  5 gatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacgg 103  Q
    |||||||||||||||| |||||||||||||||||||| |||  | | || | ||||||| ||| |||||||||||||||||   ||||||||||||||||    
T  1191541 gatcttggagtttgctcctccagaggtctcaggttcgtttccctctagtaccaatttcggtgggctaagtccatacagagtttgctctggctttaaacgg 1191640  T
Q  104 agcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttgga 156  Q
     | ||||  |||||  |||||| |||  | || |||||||||||||||||||||    
T  1191641 tgtccccgaaagtgaacggtggaattgttcccctcgaattagtcgattcttgga 1191694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 171
Target Start/End: Original strand, 8258925 - 8259094
Alignment:
Q  5 gatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacgg 103  Q
    |||||||||||||||| ||||||| ||||||||||||||||  | ||  || ||||| | |||  ||||||||||||||      ||||||||||| |||    
T  8258925 gatcttggagtttgctcctccagatgtctcaggttcgattccctctgacgccaattttggtgggttaagtccatacagatcttgttctggctttaatcgg 8259024  T
Q  104 agcccccacaagtgggcggtgggattag-tccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
     |||||| ||||| |||||||||||||| ||| ||| |||||||||||||||||| |||||| |||||||    
T  8259025 ggcccccgcaagtaggcggtgggattagttccttcggattagtcgattcttggatcggatactgagtttt 8259094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 41314016 - 41314149
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | | |||||  ||||||| ||| ||||||| ||||||||    ||||| ||||||    
T  41314016 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgtcaatttcggtgggctaagtctatacagagcttgctctgactttaa 41314115  T
Q  100 acggagcccccacaagtgggcggtgggattagtcc 134  Q
    |||| |  ||| ||||||| |||||||||| ||||    
T  41314116 acgg-gatcccgcaagtggacggtgggattggtcc 41314149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 45271408 - 45271530
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||| |||||||||||||||||||| ||| |||||||| | | |||||| ||||||  ||| ||||||||||||||||    ||||||||||||    
T  45271408 ttgggatcttagagtttgcttctccagaggtttcatgttcgattccctctggtgccaatttcagtgggctaagtccatacagagcttgctctggctttaa 45271507  T
Q  100 acggagcccccacaagtgggcgg 122  Q
    ||| ||||||  |||||| ||||    
T  45271508 acgaagcccctgcaagtgagcgg 45271530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 171
Target Start/End: Original strand, 13266518 - 13266686
Alignment:
Q  5 gatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacgg 103  Q
    ||||||||| |||||| ||  |||||||||| |||||||||  | |||||| |||| || ||||||||||||||||||||    ||||||||||||||||    
T  13266518 gatcttggaatttgctcctttagaggtctcatgttcgattcactctggtgccaattccggtggactaagtccatacagagcttgctctggctttaaacgg 13266617  T
Q  104 agcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
     | |||| ||||||||   ||||||| || || || ||||||||||||||||||| ||||| ||||||||    
T  13266618 -ggccccgcaagtgggtaatgggattggtcccctcaaattagtcgattcttggatcggatatcgagtttt 13266686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 174
Target Start/End: Complemental strand, 714242 - 714122
Alignment:
Q  56 aatttcgatggactaagtccatacagagtaaactctggctttaaacggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttg 154  Q
    ||||||| ||| ||||||||||| |||||   ||||| ||||||||||||||||| ||| ||||||||||| || || || ||  ||||||||||||||     
T  714242 aatttcggtgggctaagtccatagagagtttgctctgactttaaacggagcccccgcaaatgggcggtgggtttcgtcccctcagattagtcgattctta 714143  T
Q  155 ga-tggataccgagttttaaa 174  Q
    || ||||||||||||||||||    
T  714142 gattggataccgagttttaaa 714122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 41329867 - 41330042
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||| ||||||||| ||||| |||| |||| ||||||||  | |||||| ||||| |  || ||||||||||| ||||    ||||||||||||    
T  41329867 ttgggatcttagagtttgctcctccaaaggtttcagattcgattccctctggtgccaattttggcgggctaagtccata-agagcttgctctggctttaa 41329965  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttgga-tggataccgagttttaaa 174  Q
    | || |||||||||||||||||||| |||| || || ||  |||||||| ||||||||  |||||||||||||||||    
T  41329966 atggggcccccacaagtgggcggtgagattggtcccctcagattagtcggttcttggaccggataccgagttttaaa 41330042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 171
Target Start/End: Original strand, 18692090 - 18692157
Alignment:
Q  106 cccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||||||||||||||||||||||| || || ||| |||||||||||||||||| ||||||||||||||    
T  18692090 cccccacaagtgggcggtgggattggtcccctcgtattagtcgattcttggatcggataccgagtttt 18692157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 18976598 - 18976524
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttttggtgcgaatttcgatggactaagtcc 75  Q
    |||||||||||||||||||| |||||||||||||| |||||||||  |  | || ||||||| ||||||||||||    
T  18976598 ttgggatcttggagtttgctcctccagaggtctcatgttcgattccctctgagccaatttcggtggactaagtcc 18976524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 96 - 174
Target Start/End: Complemental strand, 44929923 - 44929843
Alignment:
Q  96 ttaaacggagcccccacaagtgggcggtgggattagtcca-tcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    ||||||||  ||||| ||||||| |||||||||| ||||  | |||||||||||||||||||| |||||||||||||||||    
T  44929923 ttaaacgggacccccgcaagtggacggtgggattggtccccttgaattagtcgattcttggatcggataccgagttttaaa 44929843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 171
Target Start/End: Complemental strand, 2140634 - 2140486
Alignment:
Q  23 tccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacggagccccca-caagtgggc 120  Q
    |||||||||||||||||||||||  | |||||  ||||||| ||||    ||||||||||||    ||||||||||||| ||  |||||  |||||||||    
T  2140634 tccagaggtctcaggttcgattccctctggtgtcaatttcggtgga----gtccatacagagcttgctctggctttaaatgggcccccccgcaagtgggc 2140539  T
Q  121 ggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    ||||||||| || || ||| ||||||||||| |||||| ||||||||||||||    
T  2140538 ggtgggattggtcccctcggattagtcgattattggatcggataccgagtttt 2140486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 134
Target Start/End: Original strand, 3943791 - 3943898
Alignment:
Q  28 aggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacggagcccccacaagtgggcggtggg 126  Q
    ||||||||| ||||||| | | |||||| ||||||| | | ||||||||||||||||    |||||||||||||||| || ||| |||||||| ||||||    
T  3943791 aggtctcagattcgattttctctggtgccaatttcggttggctaagtccatacagagcttgctctggctttaaacggggctcccgcaagtgggtggtggg 3943890  T
Q  127 attagtcc 134  Q
    ||| ||||    
T  3943891 attggtcc 3943898  T

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Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 32845115 - 32845194
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatac 79  Q
    |||||||||||||||||||| ||||| | || |||||||||||| | | |||||| ||||||| ||| ||||||||||||    
T  32845115 ttgggatcttggagtttgctcctccaaaagtttcaggttcgattccctctggtgccaatttcggtgggctaagtccatac 32845194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 171
Target Start/End: Complemental strand, 18976521 - 18976455
Alignment:
Q  107 ccccacaagtgggcggtgggattagtcca-tcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| |||||||||||||||||| ||||  |||||||||||||||||||||| ||||||||| ||||    
T  18976521 ccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgaatttt 18976455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 157
Target Start/End: Original strand, 45132399 - 45132469
Alignment:
Q  88 ctctggctttaaacggagcccccacaagtgggcggtgggattagtcc-atcgaattagtcgattcttggat 157  Q
    |||||||||||||||| |||||||||||||||| || ||||| ||||  ||| |||| |||||||||||||    
T  45132399 ctctggctttaaacggggcccccacaagtgggcagtaggattggtcctctcggattaatcgattcttggat 45132469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 125
Target Start/End: Complemental strand, 23787173 - 23787056
Alignment:
Q  9 ttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacggagcc 107  Q
    ||||| ||||||||| || |||||||||||| |||||  | |||||| ||||||| ||| |||| ||||||||||||   ||||| ||||||| ||  ||    
T  23787173 ttggaatttgcttctacaaaggtctcaggtttgattccctctggtgccaatttcggtgggctaaatccatacagagtttgctctgactttaaatgggacc 23787074  T
Q  108 cccacaagtgggcggtgg 125  Q
     || ||||||||||||||    
T  23787073 tccgcaagtgggcggtgg 23787056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 171
Target Start/End: Complemental strand, 27269429 - 27269344
Alignment:
Q  88 ctctggctttaaacggagcccccacaagtgggcggtgggatt-agtccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||||||||||||| |  | ||| |||||||||||||||||| |  || ||| |||||||||||||||||| ||||||||||||||    
T  27269429 ctctggctttaaacagccctcccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggataggataccgagtttt 27269344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 4852582 - 4852626
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattc 45  Q
    |||| ||||||||||||||| ||||| ||||||||||||||||||    
T  4852582 ttggaatcttggagtttgctcctccaaaggtctcaggttcgattc 4852626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 129
Target Start/End: Complemental strand, 5608202 - 5608078
Alignment:
Q  6 atcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacgga 104  Q
    |||||||| |||||| || |||||||||||  ||||||||| | |||||  ||||| | ||| ||||||||||| ||||    ||||| |||||||||||    
T  5608202 atcttggaatttgctccttcagaggtctcatattcgattctctctggtgtcaattttggtgggctaagtccatatagagcttgctctgactttaaacgga 5608103  T
Q  105 gcccccacaagtgggcggtgggatt 129  Q
    || ||||||| ||| ||| ||||||    
T  5608102 gctcccacaaatggtcggcgggatt 5608078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 6714450 - 6714410
Alignment:
Q  5 gatcttggagtttgcttctccagaggtctcaggttcgattc 45  Q
    |||||||||||||||| |||||||||||||||||| |||||    
T  6714450 gatcttggagtttgctcctccagaggtctcaggtttgattc 6714410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 171
Target Start/End: Complemental strand, 6714380 - 6714295
Alignment:
Q  88 ctctggctttaaacggagcccccacaagtgggcggtgggattagtcca-tcgaattagtcgattcttgga-tggataccgagtttt 171  Q
    |||| |||||||||||  | ||| ||||||| ||||| |||| ||||  || |||||||||||||||||| |||||||||||||||    
T  6714380 ctctcgctttaaacgggactcccgcaagtggacggtgagattggtcccctcaaattagtcgattcttggattggataccgagtttt 6714295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 171
Target Start/End: Original strand, 39957894 - 39957955
Alignment:
Q  112 caagtgggcggtgggattagt-ccatcgaattagtcgattcttgga-tggataccgagtttt 171  Q
    |||||||||| ||||||| || || ||| ||||||||||||||||| |||||||||||||||    
T  39957894 caagtgggcgatgggattggttccctcggattagtcgattcttggattggataccgagtttt 39957955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 156
Target Start/End: Original strand, 44610151 - 44610220
Alignment:
Q  88 ctctggctttaaacggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttgga 156  Q
    |||| |||||||| || |||||  |||||||||||||||||| || |||||| |||||||| ||||||||    
T  44610151 ctctagctttaaatggggcccctgcaagtgggcggtgggattggtcccatcggattagtcggttcttgga 44610220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 32845194 - 32845254
Alignment:
Q  94 ctttaaacggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattctt 153  Q
    |||||||| | |||||  |||||||||||||||||| || || ||||||||||||||||||    
T  32845194 ctttaaacagggcccctgcaagtgggcggtgggattggtcccttcgaattagtcgattctt 32845254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 40997523 - 40997479
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattc 45  Q
    |||||||||||||||||||| ||||| |||||||| |||| ||||    
T  40997523 ttgggatcttggagtttgctcctccaaaggtctcatgttcaattc 40997479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 1e-40; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 6014453 - 6014277
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||| |||||| ||||||| |||  |||||||||||||||    ||||||||||||    
T  6014453 ttgggatcttggagtttgcttctccagagatctcaggttcgattacttctggtgccaatttcggtgggttaagtccatacagagcttgctctggctttaa 6014354  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    |||| | || | ||||||||||||| ||||||| || |||||||||||||||||||||| ||||| |||||||||||    
T  6014353 acggggtccacgcaagtgggcggtgagattagtcccctcgaattagtcgattcttggatcggatatcgagttttaaa 6014277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 19456382 - 19456211
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaa 100  Q
    |||||||||||||||||||| |||||||||||||||||||||| | | |||||| ||||||| ||| ||||||||||||||||    |||||||||||||    
T  19456382 ttgggatcttggagtttgctcctccagaggtctcaggttcgatccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaa 19456283  T
Q  101 cggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    ||| | |||| |||||||||||||||||| || || ||| |||||||||||||||||| ||||||||||||||    
T  19456282 cgg-ggccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 19456211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 33709674 - 33709503
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| |||||||||||||| |||||||| | | |||||| ||||||| ||| ||||||||||||||||  | ||||||||||||    
T  33709674 ttgggatcttggagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttcggtgggctaagtccatacagag--agctctggctttaa 33709577  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    ||||  |||||||||||||||||||||||| || || ||| |||||||||||||||||| |||||||| |||||    
T  33709576 acgggacccccacaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgtgtttt 33709503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 8484834 - 8484661
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| |||||||||||||||||| |||| | | |||||| ||||||| ||| |||||| |||||||||    ||||||||||||    
T  8484834 ttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtgccaatttcggtgggctaagttcatacagagcttgctctggctttaa 8484735  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| |||||| |||||||||||||||||| || || ||| |||||||||||||||||| ||||||||||||||    
T  8484734 acggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 8484661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 32059613 - 32059440
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||| ||||||||||||||||| ||| |||||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  32059613 ttgggatcttggagtttgctcctccaaaggtctcaggttcgattccttctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 32059514  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| |||||| |||||||||||||||||| || || ||| |||||||| | ||||||| ||||||||||||||    
T  32059513 acggggcccccgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagtttt 32059440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 15641278 - 15641106
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | | ||| || ||||||| ||| ||||||||||||||||    ||||||||||||    
T  15641278 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaa 15641179  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggatggataccgagtttt 171  Q
    |||| |||||| |||||||||||||||||| || || ||| |||||||||||||||   ||||||||||||||    
T  15641178 acggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgatcggataccgagtttt 15641106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 11926675 - 11926498
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| |||||||||||||||||| |||| | | |||||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  11926675 ttgggatcttggagtttgctcctccagaggtctcaggttagattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 11926576  T
Q  100 acggag-cccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    |||| | ||||| |||||||| ||||||||| || || ||| |||||||||||||||||| |||||||||||||||||    
T  11926575 acggggccccccgcaagtgggtggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttaaa 11926498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 18207231 - 18207404
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | |  ||||| ||||||| ||| ||||||||||||||||     |||||||||||    
T  18207231 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctccggtgccaatttcggtgggctaagtccatacagagcttgttctggctttaa 18207330  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||  |||||| |||||||||||||||||| || || ||| |||||||||||||||||| ||||||||||||||    
T  18207331 acgaggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 18207404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 27498904 - 27498731
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||| ||||||||||||||| ||| ||||||||||||||||||||  | |||||| ||||||| ||| ||||||||||||| ||    ||||||||||||    
T  27498904 ttggaatcttggagtttgctcctctagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacatagcttgctctggctttaa 27498805  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| |||||| |||||||||||||||||| || || ||| |||||||||||||||||| ||||||||||||||    
T  27498804 acggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 27498731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 38684232 - 38684404
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | | |||||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  38684232 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 38684331  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| |||||| |||||| ||||||||||| || || ||| |||||||||||||||||| ||||||||| ||||    
T  38684332 acgg-gcccccgcaagtgagcggtgggattggtcccctcggattagtcgattcttggatcggataccgattttt 38684404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 13038627 - 13038452
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | | |||||| ||||| ||||| |||||| |||||||||  || | |||||||||    
T  13038627 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaattttgatgggctaagttcatacagag-caagtatggctttaa 13038529  T
Q  100 acggagcccccacaagtgggcggtgggatt-agtccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    |||| |||||| |||||||||||||||||| |  || |||||||||||||||||||||| |||||| || |||||||    
T  13038528 acggggcccccgcaagtgggcggtgggattgatcccctcgaattagtcgattcttggatcggatactgaattttaaa 13038452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 34310166 - 34310342
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||| ||||||||||||||| ||||||||||||||||||||||| | | |||||| ||||| | ||| ||||||||||||||||    ||||||||||||    
T  34310166 ttggaatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaattttggtgggctaagtccatacagagcttgctctggctttaa 34310265  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    ||||  |||||| |||||| |||||||||| || || |||||||| ||||||||||||| |||||||||||||||||    
T  34310266 acgggacccccataagtggacggtgggattggtcccctcgaattaatcgattcttggatcggataccgagttttaaa 34310342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 30485852 - 30486025
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattc-ttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| || |||||||||||||||||||||  | |||||  ||||||| ||| ||||||||||||||||    ||||||||||||    
T  30485852 ttgggatcttggagtttgctccttcagaggtctcaggttcgattcactctggtgtcaatttcggtgggctaagtccatacagagcttgctctggctttaa 30485951  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||  |||||| |||||||||||||||||| || || ||| ||||||| |||||||||| ||||||||||||||    
T  30485952 acgatgcccccgcaagtgggcggtgggattggtcccctcggattagtcaattcttggatcggataccgagtttt 30486025  T

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Target: chr5; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 13108622 - 13108465
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| |||||||| |||||||||||||| | | |||||| ||||| ||||| |||||| |||||||||  || |||| ||||||    
T  13108622 ttgggatcttggagtttgctcctccagagatctcaggttcgattccctctggtgccaattttgatgggctaagttcatacagag-caagtctgcctttaa 13108524  T
Q  100 acggagcccccacaagtgggcggtgggatt-agtccatcgaattagtcgattcttggat 157  Q
    |||| |||||| |||||||||||||||||| |  || ||||||||||||||||||||||    
T  13108523 acggggcccccgcaagtgggcggtgggattgatcccctcgaattagtcgattcttggat 13108465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 4603801 - 4603974
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||| || ||||| |||||||| ||| |||||| ||||||||||| ||||||||||||||||    ||||||||||||    
T  4603801 ttgggatcttggagtttgctcctccaaagatctcaagttcgattccttctggtgccaatttcgatgggctaagtccatacagagctcgctctggctttaa 4603900  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| |||||  ||||||| |||||||||| || || ||| |||||||| | ||||||| ||||||||||||||    
T  4603901 acggggcccctgcaagtggacggtgggattggtcccctcggattagtcggtccttggatcggataccgagtttt 4603974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 31288119 - 31287946
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||| |||||||| |||||||| | |||||||| ||||||| |||  |||||||||||| ||    || || ||||||    
T  31288119 ttgggatcttggagtttgctcctccaaaggtctcatgttcgattccctttggtgccaatttcggtgggttaagtccatacaaagcttgctttgactttaa 31288020  T
Q  100 acggagcccccacaagtgggcggtgggattagtc-catcgaattagtcgattcttgga-tggataccgagtttt 171  Q
    |||| |||||| |||||||||||||||||| ||| | |||||||||||| ||||||||  ||||||||||||||    
T  31288019 acggggcccccgcaagtgggcggtgggattggtctcctcgaattagtcggttcttggaccggataccgagtttt 31287946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 171
Target Start/End: Complemental strand, 21236532 - 21236362
Alignment:
Q  4 ggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacg 102  Q
    |||||||||||||| || || |||||||||  ||||||||||| | | |||  |||||| |||| |||||||||||||||||   ||||| |||||||||    
T  21236532 ggatcttggagttttctccttcagaggtcttcggttcgattctctctagtgtcaatttcaatgggctaagtccatacagagttttctctgactttaaacg 21236433  T
Q  103 gagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    | |||||| ||||||||||||||||||||| || ||  ||||||||||||||| || ||||||||||||||    
T  21236432 gggcccccgcaagtgggcggtgggattagtcccctcagattagtcgattcttgaatcggataccgagtttt 21236362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 7085799 - 7085626
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    ||||||||||||||||| || ||||||||||||| ||||||||||  | | |||  ||||||| ||| ||||||||||||||||    ||||| ||||||    
T  7085799 ttgggatcttggagttttctcctccagaggtctccggttcgattccctctagtgtcaatttcggtgggctaagtccatacagagcttgctctgactttaa 7085700  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| | |||| |||||||||||||||||| || || ||| ||||||||||||||| || ||||||||||||||    
T  7085699 acggggtccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggataccgagtttt 7085626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 25586956 - 25587085
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcga-ttcttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||| | |||||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  25586956 ttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 25587055  T
Q  100 ac-ggagcccccacaagtgggcggtgggat 128  Q
    || ||| ||||| |||||||||||| ||||    
T  25587056 acaggaccccccccaagtgggcggtcggat 25587085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 27487728 - 27487551
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattct-tttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    ||||||| ||||||||||||  ||||||||||||||||| ||| |  |||||||| ||||||| ||||||||||||||||||||    |||| |||||||    
T  27487728 ttgggattttggagtttgctcttccagaggtctcaggtttgatcccatttggtgccaatttcggtggactaagtccatacagagcttgctctagctttaa 27487629  T
Q  100 ac-ggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    || || ||||   |||||||||||||||||| || || ||| |||||||||||||||||| |||||| ||||||||||    
T  27487628 acgggggcccttgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatacagagttttaaa 27487551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 166
Target Start/End: Complemental strand, 11465075 - 11464913
Alignment:
Q  6 atcttggagtttgcttctccagaggtctcaggttcga-ttcttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacgga 104  Q
    ||||||||||||||| ||||| | ||||||||||||| ||| | |||||| ||||| | ||| |||||| |||||||||   |||||||||||||||||     
T  11465075 atcttggagtttgctcctccaaatgtctcaggttcgatttcctctggtgccaattttggtgggctaagttcatacagagcttactctggctttaaacgg- 11464977  T
Q  105 gcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccga 166  Q
    | |||| |||||||| ||||||||| || || |||||||||||||||||||||| |||||||||    
T  11464976 ggccccgcaagtgggtggtgggattggtcccctcgaattagtcgattcttggatcggataccga 11464913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 42193509 - 42193665
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcga-ttcttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||| | || ||| ||||||| ||| ||||||| |||||||||   || |||||||||    
T  42193509 ttgggatcttggagtttgcttccccagaggtctcaggttcgatttcctctgatgccaatttcggtgggctaagtctatacagagtttgctttggctttaa 42193608  T
Q  100 acggagcccccacaagtgggcggtgggattagtcc-atcgaattagtcgattcttggat 157  Q
    | |||  |||| ||||||||||||||| || ||||  ||| ||||||||||||||||||    
T  42193609 atgga--ccccgcaagtgggcggtggggttggtcctctcggattagtcgattcttggat 42193665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 157
Target Start/End: Original strand, 10399800 - 10399956
Alignment:
Q  4 ggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacg 102  Q
    |||||||||||||||||||| || || | ||||||| |||||| | ||| || ||||||||||| |||||||||||| ||| |  ||||| |||||||||    
T  10399800 ggatcttggagtttgcttcttcaaagatttcaggtttgattctctctggcgccaatttcgatgggctaagtccatacggagcatgctctgactttaaacg 10399899  T
Q  103 gagcccccacaagtgggcggtgggattagt--ccatcgaattagtcgattcttggat 157  Q
    | ||||||  |||||| |||||||||| ||  || ||||||||||||||||||||||    
T  10399900 gggcccccgtaagtggacggtgggattggtcaccctcgaattagtcgattcttggat 10399956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 23270695 - 23270519
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    ||||||||||||||||||||  |||| |||||||| |||||||| | |  | ||| ||||||| ||| ||||||||||||||||    || |||||||||    
T  23270695 ttgggatcttggagtttgctcatccaaaggtctcaagttcgatttcctccgatgccaatttcggtgggctaagtccatacagagcttgctttggctttaa 23270596  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttgga-tggataccgagttttaaa 174  Q
    ||||||||||| ||| ||| |||||||||| || || ||| |||||| |||||||||| |||||||| |||||||||    
T  23270595 acggagcccccgcaaatggacggtgggattggtcccctcggattagttgattcttggattggataccaagttttaaa 23270519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 171
Target Start/End: Original strand, 35425088 - 35425210
Alignment:
Q  51 gtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacggagcccccacaagtgggcggtgggattagtcc-atcgaattagtcgat 149  Q
    |||| ||||||| ||| ||||||||||||||||    |||||||||||||||| |||||| |||||||||||||||||| ||||  ||| ||||||||||    
T  35425088 gtgccaatttcggtgggctaagtccatacagagctcgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcctctcggattagtcgat 35425187  T
Q  150 tcttggat-ggataccgagtttt 171  Q
    |||||||| ||||||||| ||||    
T  35425188 tcttggatcggataccgaatttt 35425210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 171
Target Start/End: Original strand, 37495075 - 37495251
Alignment:
Q  5 gatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacgg 103  Q
    |||||||||||||||| ||||||||||||||||||||||| | | |||||| ||||| | ||| ||||||||||||||||    |||||||||||||||     
T  37495075 gatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaattttggtgggctaagtccatacagagcttgctctggctttaaacgc 37495174  T
Q  104 agcc-------cccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
      ||       ||| |||||||||||||||||| || || ||| |||||||||||||||||| ||||||||||||||    
T  37495175 ccccccccccgcccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 37495251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 171
Target Start/End: Complemental strand, 10869734 - 10869565
Alignment:
Q  5 gatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacgg 103  Q
    |||||||||||||||| ||||| ||||||||||||||||| | | |||| | ||||||| ||| ||||||||| || |||    ||||||||||||| ||    
T  10869734 gatcttggagtttgctcctccaaaggtctcaggttcgattccatctggttccaatttcggtgggctaagtccacactgagcttgctctggctttaaatgg 10869635  T
Q  104 agcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
     ||| || |||||||||||||||||| || || ||| |||||||| ||||||||| ||||||| ||||||    
T  10869634 ggcctccgcaagtgggcggtgggattggtcccctcggattagtcggttcttggatcggataccaagtttt 10869565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 12398621 - 12398448
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||| ||||||||||||||||| | | |||||  ||||||| ||| |||||| |||||||||    ||||||||||||    
T  12398621 ttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctatggtgtcaatttcggtggcctaagttcatacagagcttgctctggctttaa 12398522  T
Q  100 acggagcccccacaagtgggcggtgggattagtcc-atcgaattagtcgattcttgga-tggataccgagtttt 171  Q
    | || |||||| ||| ||| ||||| ||||  |||  || ||||||||| |||||||| |||||||||||||||    
T  12398521 atggggcccccgcaaatggacggtgagattgatcctctcaaattagtcggttcttggattggataccgagtttt 12398448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 38631134 - 38631051
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagag 83  Q
    |||||||||||||||||||| ||||||||||||||| ||||||| | | |||||| ||||||||||| ||||||||||||||||    
T  38631134 ttgggatcttggagtttgctcctccagaggtctcagattcgattccctctggtgccaatttcgatgggctaagtccatacagag 38631051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 5049161 - 5049318
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||| |||||| ||||||||| || | ||||||||| ||| ||||  | |||| | ||||||||||| |||||| |||||||||    ||||||||||||    
T  5049161 ttggaatcttgaagtttgcttttctaaaggtctcagattcaattccctctggtaccaatttcgatggtctaagttcatacagagcttgctctggctttaa 5049260  T
Q  100 acggagcccccacaagtgggcggtgggattagtcc-atcgaattagtcgattcttggat 157  Q
    |||| |||||| ||| ||| |||||||||| |||| |||||||||||||||||||||||    
T  5049261 acgg-gcccccgcaaatggacggtgggattggtcccatcgaattagtcgattcttggat 5049318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 36954842 - 36955000
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||| ||||||||||||||||||| | | |||| | |||||||  |  |||||||||||||||||   || |||||||||    
T  36954842 ttgggatcttggagtttgctcctctagaggtctcaggttcgattccctctggttctaatttcggcgtgctaagtccatacagagtttgctttggctttaa 36954941  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat 157  Q
    | ||  ||||| ||||||| | ||||||||||| || ||  ||||||||||||||||||    
T  36954942 atgggccccccgcaagtggactgtgggattagtcccctcatattagtcgattcttggat 36955000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 15931083 - 15931211
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    ||||||||||||||||||||||| || | ||||||||||||||| | | |||||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  15931083 ttgggatcttggagtttgcttcttcacaagtctcaggttcgattccctctggtgccaatttcggtgg-ctaagtccatacagagcctgctctggctttaa 15931181  T
Q  100 acggagcccccacaagtgggcggtgggatt 129  Q
    || | || | | ||||||||||||||||||    
T  15931182 acagggctctcgcaagtgggcggtgggatt 15931211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 15971295 - 15971166
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | | || ||  ||||||| ||| ||||||||||||| ||    ||||| ||||||    
T  15971295 ttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctgatgtcaatttcggtgggctaagtccatacatagcttgctctgactttaa 15971196  T
Q  100 acggagcccccacaagtgggcggtgggatt 129  Q
    ||||  ||||| ||||||||||||| ||||    
T  15971195 acgggacccccgcaagtgggcggtgagatt 15971166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 95 - 174
Target Start/End: Original strand, 22693054 - 22693135
Alignment:
Q  95 tttaaacggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    ||||||||| |||||| |||||||||||||||||| || || ||| |||||||||||||||||| |||||||||||||||||    
T  22693054 tttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttaaa 22693135  T

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Target: chr5; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 26009437 - 26009282
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattct-tttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||  |||||| || ||| | |||| || ||||||||||  |||||||| ||||||  ||| |||||||||| |||||   |||||||||||||    
T  26009437 ttgggatctcagagtttactcctcgaaaggtttccggttcgattccctttggtgccaatttcagtgggctaagtccatgcagagcttactctggctttaa 26009338  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttg 154  Q
    |||| |||||| ||||||||  ||||||||||| || ||| |||||||| ||||||    
T  26009337 acggggcccccgcaagtgggtagtgggattagtcccctcggattagtcggttcttg 26009282  T

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Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 19145584 - 19145409
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagag-taaactctggcttta 98  Q
    ||||||||||||||| |||| |||   ||||||| ||||||||||  | |||||| ||||||| ||| | |||||||||||||| |   |||||||||||    
T  19145584 ttgggatcttggagtatgctcctctcaaggtctccggttcgattccctctggtgccaatttcggtgggc-aagtccatacagagctttgctctggcttta 19145486  T
Q  99 aacggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    || ||  ||||| |||||||||||||||||| || || ||| |||||| | ||||||||| |||||||||||||||||    
T  19145485 aatggt-cccccgcaagtgggcggtgggattggtcccctcggattagttggttcttggatcggataccgagttttaaa 19145409  T

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Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 56 - 174
Target Start/End: Complemental strand, 9659428 - 9659308
Alignment:
Q  56 aatttcgatggactaagtccatacagagtaaactctggctttaaacggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttg 154  Q
    ||||||| ||| ||||||||||||| ||    ||||||||||||| ||  ||||| ||||||| |||||||||| || || ||| |||||| ||||||||    
T  9659428 aatttcggtgggctaagtccatacacagcttgctctggctttaaatgggccccccgcaagtggacggtgggattggtcccttcggattagttgattcttg 9659329  T
Q  155 gat-ggataccgagttttaaa 174  Q
    ||| |||||||||||||||||    
T  9659328 gatgggataccgagttttaaa 9659308  T

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Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 22392725 - 22392769
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattc 45  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  22392725 ttgggatcttggagtttgctcctccagaggtctcaggttcgattc 22392769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 34049846 - 34050011
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaa 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||           | | ||| ||||||||||||||||    |||||||||||||    
T  34049846 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccttc----------taggtgggctaagtccatacagagcttgctctggctttaaa 34049935  T
Q  101 cggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    ||| |||||| ||||||| |||| ||||| || || ||| |||||| ||||||   || |||||||||||||||||    
T  34049936 cggggcccccgcaagtggtcggtaggattggtcccctcggattagttgattctcaaatcggataccgagttttaaa 34050011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 25750784 - 25750610
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcga---ttcttttggtgcgaatttcgatggactaagtccatacagagtaaactctggcttt 97  Q
    |||||||||||||||||||| |||||||||||||| ||| ||   | ||| |||||| ||||||| |||  |||||||||| ||||    |||||||||     
T  25750784 ttgggatcttggagtttgctcctccagaggtctcaagttggatattccttctggtgccaatttcggtgggttaagtccatatagagcttgctctggctt- 25750686  T
Q  98 aaacggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
     |||||  ||||  |||||||| |||| |||| || || ||  |||||||||||||||||| |||||||||||||||||    
T  25750685 -aacgggacccc--caagtggggggtgagattggtcccttcagattagtcgattcttggatcggataccgagttttaaa 25750610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 171
Target Start/End: Original strand, 22392800 - 22392885
Alignment:
Q  88 ctctggctttaaacggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||||||||||||||| |||||| |||||||||||||| ||| || || ||  ||||||||||| |||||| ||||||||||||||    
T  22392800 ctctggctttaaacggggcccccgcaagtgggcggtggaattggtcccctcagattagtcgatttttggatcggataccgagtttt 22392885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 171
Target Start/End: Complemental strand, 41351188 - 41351104
Alignment:
Q  88 ctctggctttaaacggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||||||||||||||| || ||  |||||||||||||||||| || || ||| |||||||||||||||||| ||||||||||||||    
T  41351188 ctctggctttaaacggggctccg-caagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 41351104  T

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Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 1827699 - 1827659
Alignment:
Q  5 gatcttggagtttgcttctccagaggtctcaggttcgattc 45  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  1827699 gatcttggagtttgctcctccagaggtctcaggttcgattc 1827659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 174
Target Start/End: Original strand, 36895537 - 36895625
Alignment:
Q  88 ctctggctttaaacggagcccccacaagtgggcggtgggattagtc-catcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    |||||||||  |||| |||| || ||||||||||| ||||||  || | |||||||||||| ||||||||| |||||||||||||||||    
T  36895537 ctctggcttagaacgtagccgccgcaagtgggcggggggattgttctcctcgaattagtcggttcttggatcggataccgagttttaaa 36895625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 171
Target Start/End: Complemental strand, 38631047 - 38630979
Alignment:
Q  105 gcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||||| |||||||||||||||||| || || ||| |||| ||||||||||||| ||||||||||||||    
T  38631047 gcccccgcaagtgggcggtgggattggtcccctcggattaatcgattcttggatcggataccgagtttt 38630979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 5067325 - 5067368
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt 44  Q
    |||||||||| ||||||||| |||||||| ||||||||||||||    
T  5067325 ttgggatcttcgagtttgctcctccagagatctcaggttcgatt 5067368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 7151353 - 7151436
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcga-ttcttttggtgcgaatttcgatggactaagtccatacagag 83  Q
    |||||||||||||||||||| ||| |||||||| |||||||| | | | ||| |  ||||||| ||| ||||||||||||||||    
T  7151353 ttgggatcttggagtttgctcctcaagaggtcttaggttcgactccctctggcgtcaatttcggtgggctaagtccatacagag 7151436  T

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Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 174
Target Start/End: Complemental strand, 13659324 - 13659242
Alignment:
Q  94 ctttaaacggagcccccacaagtgggcggtgggatt-agtccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    ||||||||||  ||||| |||||||||||||||||| |  || ||| |||| ||||||||||||| ||||||||| |||||||    
T  13659324 ctttaaacgggacccccgcaagtgggcggtgggattgatcccctcggattaatcgattcttggatcggataccgaattttaaa 13659242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 171
Target Start/End: Original strand, 8821096 - 8821181
Alignment:
Q  88 ctctggctttaaacggagcccccacaagtgggcggtgggattagtc-catcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||||||||||||  | || || ||||||||| ||||||||| ||| | ||||||||||| ||||||||||  |||||||||||||    
T  8821096 ctctggctttaaattgggctccaacaagtgggtggtgggattggtcacttcgaattagtctattcttggatcagataccgagtttt 8821181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 129
Target Start/End: Original strand, 31206315 - 31206396
Alignment:
Q  49 tggtgcgaatttcgatggactaagtccatacagag-taaactctggctttaaacggagcccccacaagtgggcggtgggatt 129  Q
    |||||| ||||||  ||| |||||||||||||||| ||  |||| |||||||| ||  ||||||||||||| ||||||||||    
T  31206315 tggtgccaatttcattggcctaagtccatacagagctatgctcttgctttaaatgggacccccacaagtggacggtgggatt 31206396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 125
Target Start/End: Original strand, 12647829 - 12647861
Alignment:
Q  93 gctttaaacggagcccccacaagtgggcggtgg 125  Q
    |||||||||||||||||||||||||| ||||||    
T  12647829 gctttaaacggagcccccacaagtggacggtgg 12647861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 23290708 - 23290752
Alignment:
Q  88 ctctggctttaaacggagcccccacaagtgggcggtgggattagt 132  Q
    |||||||||  |||||||||||| ||||||||||||| |||||||    
T  23290708 ctctggcttagaacggagcccccgcaagtgggcggtgagattagt 23290752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 82; Significance: 9e-39; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 5255 - 5082
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||| ||||||||||||||||| | | |||||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  5255 ttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 5156  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| |||||| ||| |||||||||||||| || || ||| |||||||||||||||||| ||||||||||||||    
T  5155 acggggcccccgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 5082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 7482 - 7306
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| |||||||| |||||||||||||| | |  ||||| ||||||| ||| ||||||||||||||||    ||||||||||||    
T  7482 ttgggatcttggagtttgctcctccagagatctcaggttcgattccctccggtgccaatttcggtgggctaagtccatacagagctttctctggctttaa 7383  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    |||| |||||| |||||||||||||||||| || || ||| |||||||||||||||||| ||||||| |||||||||    
T  7382 acggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccaagttttaaa 7306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 161833 - 162006
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | | |||||| ||||||| ||| ||||||||||||||||    |||||||||| |    
T  161833 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttta 161932  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    | || |||||| |||||||||||||||||| || || ||| ||||||||||||||||||  |||||||||||||    
T  161933 atggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcagataccgagtttt 162006  T

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Target: scaffold0623 (Bit Score: 77; Significance: 9e-36; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 1229 - 1057
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | | ||| || ||||||| ||| ||||||||||||||||    ||||||||||||    
T  1229 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaa 1130  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggatggataccgagtttt 171  Q
    | || |||||| ||||||| |||||||||| || || |||||||||||||||||||   ||||||||||||||    
T  1129 atggggcccccgcaagtggacggtgggattggtcccctcgaattagtcgattcttgatcggataccgagtttt 1057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 77; Significance: 9e-36; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 9472 - 9300
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | | ||| || ||||||| ||| ||||||||||||||||    ||||||||||||    
T  9472 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaa 9373  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggatggataccgagtttt 171  Q
    | || |||||| ||||||| |||||||||| || || |||||||||||||||||||   ||||||||||||||    
T  9372 atggggcccccgcaagtggacggtgggattggtcccctcgaattagtcgattcttgatcggataccgagtttt 9300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 12173 - 12019
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcga-ttcttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||| | ||| || ||||||| ||| ||||||||||||||||    ||||||||||||    
T  12173 ttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaa 12074  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttg 154  Q
    | || | |||||||||||| |||||||||| || || ||||||||||| |||||||    
T  12073 atgg-ggccccacaagtggacggtgggattggtcccctcgaattagtcaattcttg 12019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 10866 - 10695
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcga-ttcttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||| | ||| || ||||||| ||| ||||||||||||||||    ||||||||||||    
T  10866 ttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaa 10767  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggatggataccgagtttt 171  Q
    | || | |||||||||||| |||||||||| || || ||||||||||| |||||||   ||||||||||||||    
T  10766 atgg-ggccccacaagtggacggtgggattggtcccctcgaattagtcaattcttgatcggataccgagtttt 10695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 97539 - 97363
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    ||||||||||| |||||||| ||||| ||||||||||||||||| | | |||||| ||||||| ||| ||||||||||||||||    ||||| ||||||    
T  97539 ttgggatcttgtagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctgactttaa 97440  T
Q  100 acggagcccccacaagtgggcggtgggattagtcc-atcgaattagtcgattcttgga-tggataccgagttttaaa 174  Q
    ||||  ||||| |||||||||||||||||| ||||  ||| |||||||| || |||||  |||||||||||||||||    
T  97439 acgggacccccgcaagtgggcggtgggattggtcctctcgtattagtcggtttttggaccggataccgagttttaaa 97363  T

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Target: scaffold0051 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 53044 - 52871
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| |||||||||  |||||||||||| | | |||||| ||||||| ||| | || |||||||||||    ||||||||||||    
T  53044 ttgggatcttggagtttgctcctccagaggcttcaggttcgattccctctggtgccaatttcggtgggcaaaatccatacagagcttgctctggctttaa 52945  T
Q  100 acggagcccccacaagtgggcggtgggattagtcc-atcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||| |||||| || ||||||||| ||||| ||||  ||| ||||||||||||||| || ||||||||||||||    
T  52944 acggggcccccgcaggtgggcggtaggattggtcctctcggattagtcgattcttgaatcggataccgagtttt 52871  T

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Target: scaffold0717 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 127 - 2
Alignment:
Q  5 gatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacgg 103  Q
    ||||||||||||||||  |||||||||||||||||||||||  | |  ||  ||||||||||| |||||||||||||||||   |||| |||||||||||    
T  127 gatcttggagtttgctcgtccagaggtctcaggttcgattccctcttatgtcaatttcgatgggctaagtccatacagagtttgctctagctttaaacgg 28  T
Q  104 agcccccacaagtgggcggtgggatt 129  Q
     ||||||||| |||||||||||||||    
T  27 ggcccccacatgtgggcggtgggatt 2  T

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Target: scaffold0068 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 41817 - 41645
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | | | || | ||||||| ||  ||||||||||||||||    ||||||||||||    
T  41817 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctcttgttccaatttcgttgtgctaagtccatacagagcttgctctggctttaa 41718  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggatggataccgagtttt 171  Q
    |||| |||||  |||||||||  ||||||| || || ||| |||||||||||||||   |||||| |||||||    
T  41717 acggggcccctgcaagtgggcaatgggattggtcccctcggattagtcgattcttgatcggatacagagtttt 41645  T

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Target: scaffold0102 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 171
Target Start/End: Original strand, 39131 - 39289
Alignment:
Q  16 ttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacggagcccccacaa 114  Q
    ||||| |||||||||||||| |||||||||  | |||||| ||||||| ||| ||| |||||||||||      ||||||||||||||| |||||| |||    
T  39131 ttgctcctccagaggtctcaagttcgattccctctggtgccaatttcggtgggctatgtccatacagaacttgttctggctttaaacggggcccccgcaa 39230  T
Q  115 gtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    ||||||||||||||| || || ||| ||||||||||||||||||  |||||||||||||    
T  39231 gtgggcggtgggattggtcccctcggattagtcgattcttggatcagataccgagtttt 39289  T

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Target: scaffold0328 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 157
Target Start/End: Original strand, 15016 - 15172
Alignment:
Q  2 tgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaa 100  Q
    ||||||||||||||||||| ||||||||||||||||||| ||| | | |||||| ||||||| |||  ||||||||| |||||    |||||||||||||    
T  15016 tgggatcttggagtttgctcctccagaggtctcaggttcaattccctctggtgctaatttcggtgggttaagtccatccagagcttgctctggctttaaa 15115  T
Q  101 cggagcccccacaagtgggcggtgggattagtc-catcgaattagtcgattcttggat 157  Q
     ||  ||||| ||||||||||| |||||| ||| | ||| ||||||| ||||||||||    
T  15116 tgggccccccgcaagtgggcgg-gggattggtctcctcggattagtcaattcttggat 15172  T

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Target: scaffold0157 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 20246 - 20418
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| || || |||||||||||| |||| | | |||||| |||||| |||| ||||||||||||| ||    ||||||||||||    
T  20246 ttgggatcttggagtttgctccttcaaaggtctcaggtttgattccctctggtgccaatttcaatgggctaagtccatacatagcttgctctggctttaa 20345  T
Q  100 acggagcccccacaagtgggcggtgggattagtccatcgaattagtcgattcttgga-tggataccgagtttt 171  Q
    ||||  ||||| ||||||||||||   |||  ||  ||| ||||||| |||||||||  ||||||||||||||    
T  20346 acgggacccccgcaagtgggcggtaaaattgatctctcggattagtcaattcttggaccggataccgagtttt 20418  T

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Target: scaffold0049 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 66786 - 66954
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgattcttt-tggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaa 99  Q
    |||||||||||||||||||| ||||| |||||||| ||||||||| || |||||| ||||| | ||| |||||||  |          ||||||||||||    
T  66786 ttgggatcttggagtttgctcctccaaaggtctcacgttcgattccttctggtgccaattttggtgggctaagtcgcttg--------ctctggctttaa 66877  T
Q  100 acggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccgagttttaaa 174  Q
    |||| |||||| |||||||||||||||||| || || ||| |||||||| | ||||||| |||||||||||||||||    
T  66878 acggggcccccgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttaaa 66954  T

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Target: scaffold0016 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 171
Target Start/End: Original strand, 32342 - 32484
Alignment:
Q  31 tctcaggttcgatt-cttttggtgcgaatttcgatggactaagtccatacagagtaaactctggctttaaacggagcccccacaagtgggcggtgggatt 129  Q
    |||||||||||||| | | ||| || ||||||| ||| ||||||||||||||||    ||||||||||||| |  |||||| |||||||| |||||||||    
T  32342 tctcaggttcgatttcctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaaatgtggcccccgcaagtgggtggtgggatt 32441  T
Q  130 agt-ccatcgaattagtcgattcttggatggataccgagtttt 171  Q
     || || ||| |||||||||||||||   ||||||||||||||    
T  32442 ggtcccctcggattagtcgattcttgatcggataccgagtttt 32484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1175 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1175
Description:

Target: scaffold1175; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 174
Target Start/End: Complemental strand, 2531 - 2423
Alignment:
Q  68 ctaagtccatacagagtaaactctggctttaaacggagcccccacaagtgggcggtgggattagt-ccatcgaattagtcgattcttggat-ggataccg 165  Q
    ||||||||||||||||    |||||||||||||||| |||||| |||||||||||||||||| || || ||| |||||||  | |||| || ||||||||    
T  2531 ctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtccgtccttgaatcggataccg 2432  T
Q  166 agttttaaa 174  Q
    |||||||||    
T  2431 agttttaaa 2423  T

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Target: scaffold0199 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 8580 - 8537
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt 44  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  8580 ttgggatcttggagtttgctcctccagaggtctcaggttcgatt 8537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 171
Target Start/End: Complemental strand, 8512 - 8451
Alignment:
Q  112 caagtgggcggtgggattagtcc-atcgaattagtcgattcttggat-ggataccgagtttt 171  Q
    |||||||||||||||||| ||||  ||| |||||||||||||| ||| ||||||||||||||    
T  8512 caagtgggcggtgggattggtccgctcggattagtcgattcttagatcggataccgagtttt 8451  T

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Target: scaffold0460 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 8350 - 8308
Alignment:
Q  3 gggatcttggagtttgcttctccagaggtctcaggttcgattc 45  Q
    |||||||||||||||||| |||||||||||||| |||||||||    
T  8350 gggatcttggagtttgctcctccagaggtctcaagttcgattc 8308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 12927 - 12884
Alignment:
Q  1 ttgggatcttggagtttgcttctccagaggtctcaggttcgatt 44  Q
    |||||||||||||||| ||| |||||||| ||||||||||||||    
T  12927 ttgggatcttggagttcgctcctccagagatctcaggttcgatt 12884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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