View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8580_low_4 (Length: 651)

Name: NF8580_low_4
Description: NF8580
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8580_low_4
NF8580_low_4
[»] chr3 (66 HSPs)
chr3 (18-644)||(8452924-8453550)
chr3 (19-640)||(6481104-6481725)
chr3 (19-596)||(8469850-8470427)
chr3 (33-602)||(8570111-8570680)
chr3 (63-642)||(6729842-6730421)
chr3 (63-642)||(6449914-6450493)
chr3 (28-644)||(6945567-6946186)
chr3 (188-602)||(6795777-6796185)
chr3 (28-602)||(7586170-7586744)
chr3 (28-300)||(6841035-6841307)
chr3 (28-300)||(6522944-6523216)
chr3 (163-624)||(6528019-6528477)
chr3 (193-602)||(6840061-6840464)
chr3 (26-300)||(6733971-6734245)
chr3 (26-300)||(6781418-6781692)
chr3 (517-644)||(8588525-8588652)
chr3 (163-599)||(6555610-6556043)
chr3 (30-300)||(6556176-6556446)
chr3 (189-624)||(6734413-6734842)
chr3 (66-300)||(6528475-6528709)
chr3 (190-344)||(8588273-8588427)
chr3 (71-221)||(6942278-6942428)
chr3 (189-624)||(6521279-6521705)
chr3 (71-455)||(6592653-6593037)
chr3 (68-402)||(6931937-6932266)
chr3 (192-300)||(6521864-6521972)
chr3 (192-300)||(6522269-6522377)
chr3 (192-300)||(6522809-6522917)
chr3 (193-300)||(6840900-6841007)
chr3 (69-298)||(6898431-6898660)
chr3 (192-300)||(6521999-6522107)
chr3 (192-300)||(6522539-6522647)
chr3 (192-300)||(6840492-6840600)
chr3 (193-300)||(6522134-6522241)
chr3 (214-407)||(6486350-6486543)
chr3 (192-300)||(6840627-6840738)
chr3 (189-298)||(6915564-6915673)
chr3 (192-300)||(6556041-6556149)
chr3 (193-300)||(6840765-6840872)
chr3 (85-298)||(6723536-6723749)
chr3 (85-298)||(6880875-6881088)
chr3 (71-298)||(6140631-6140858)
chr3 (71-294)||(6236070-6236293)
chr3 (71-298)||(7748347-7748574)
chr3 (67-218)||(6796293-6796444)
chr3 (71-456)||(6257547-6257932)
chr3 (192-300)||(6521729-6521837)
chr3 (189-277)||(6781162-6781250)
chr3 (370-473)||(5262427-5262530)
chr3 (192-298)||(6522406-6522512)
chr3 (192-298)||(6522676-6522782)
chr3 (247-300)||(6734336-6734389)
chr3 (247-300)||(6781274-6781327)
chr3 (249-344)||(4390328-4390423)
chr3 (189-284)||(6850749-6850844)
chr3 (487-602)||(6898849-6898964)
chr3 (370-420)||(5279303-5279353)
chr3 (231-360)||(5248682-5248811)
chr3 (178-303)||(5266531-5266656)
chr3 (486-602)||(6141046-6141162)
chr3 (486-602)||(6167651-6167767)
chr3 (189-293)||(6243780-6243884)
chr3 (368-436)||(6850598-6850666)
chr3 (71-298)||(13272010-13272237)
chr3 (189-298)||(6264145-6264254)
chr3 (486-602)||(6257962-6258078)
[»] scaffold1643 (1 HSPs)
scaffold1643 (33-602)||(474-1046)
[»] scaffold0425 (3 HSPs)
scaffold0425 (71-300)||(9224-9453)
scaffold0425 (189-624)||(8633-9065)
scaffold0425 (197-300)||(9089-9192)
[»] chr7 (2 HSPs)
chr7 (194-602)||(6574482-6574890)
chr7 (25-114)||(6574970-6575059)
[»] scaffold0958 (1 HSPs)
scaffold0958 (71-429)||(1121-1479)
[»] chr2 (1 HSPs)
chr2 (612-644)||(2623889-2623921)


Alignment Details
Target: chr3 (Bit Score: 551; Significance: 0; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 551; E-Value: 0
Query Start/End: Original strand, 18 - 644
Target Start/End: Original strand, 8452924 - 8453550
Alignment:
Q  18 gaaaatatgctccacggagaactccgtgtaccggttttcatgaatgactaactttttcaagctggtcggcaattcatttaccaaaactctatcacatctc 117  Q
    |||||| ||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  8452924 gaaaatctgctctacggagaactccgtgtaccggttttcaagaatgaataactttttcaagctggtcggcaattcatttaccaaaattctatcacatctc 8453023  T
Q  118 ttaacatctaactctatgatattatcacccttaggaattgatgcttccaacatcttgcactcattaatgaacaatttttgtaaagaaggaaggtgttgag 217  Q
    || | |||||| ||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  8453024 tttatatctaaatctatgatattatcaccgttgggaattgatgcttccaacatcttgcaatcattaatgaacaatttttgtaaagaaggaaggtgttgag 8453123  T
Q  218 gcagggccattttcaatttgggacattctcttatataaagctctttaagcaaaggaaacccttcaagacacaaccattcctcccaattgttcatcttctc 317  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8453124 gcagggacattttcaatttgggacattctcttatataaagctctttaagcaaaggaaacccttcaagacacaaccattcctcccaattgttcatcttctc 8453223  T
Q  318 aaatttcaaaacttcaagagacctgaacagatcatttgttgaactactgtcgtaaaactcttcacctatgatctttattccatcacagtctgaaatagaa 417  Q
    ||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8453224 aaatttcaaaacttcaagagacctgaacagcacatttattgaactactgtcgtaaaactcttcacctatgatctttattccatcacagtctgaaatagaa 8453323  T
Q  418 agcatcttgagaaaggggagggtcccaagtggtggcaacaaagaacataatccacaaaactgtagattaagagatactaagtttggtaaatgataacccc 517  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8453324 agcatcttgagaaaggggagtgtcccaagtggtggcaacaaagaacataatccacaaaactgtagattaagagatactaagtttggtaaatgataacccc 8453423  T
Q  518 ttatccaatttggaaatctattacctttgtattttgagatggtaagcctcttcaagtttctatttggttgaagagcctccaagactgacacagtgctttc 617  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  8453424 ttatccaatttggaaagctattacctttgtattttgagatggtaagcctcttcaagtttctatttggttggagagcctccaagactgacacattgctttc 8453523  T
Q  618 agccattgactcatccatttcttctct 644  Q
    |||||||||||||||||||||||||||    
T  8453524 agccattgactcatccatttcttctct 8453550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 19 - 640
Target Start/End: Complemental strand, 6481725 - 6481104
Alignment:
Q  19 aaaatatgctccacggagaactccgtgtaccggttttcatgaatgactaactttttcaagctggtcggcaattcatttaccaaaactctatcacatctct 118  Q
    ||||||||||||||| ||||||| |||| ||| ||||||  || |||||||||||||||||||||||||||||| |||| |||||  || ||||||| ||    
T  6481725 aaaatatgctccacgaagaactcggtgtgccgattttcacaaaggactaactttttcaagctggtcggcaattcctttatcaaaatgctgtcacatccct 6481626  T
Q  119 taacatctaactctatgatattatcacccttaggaattgatgcttccaacatcttgcactcattaatgaacaatttttgtaaagaaggaaggtgttgagg 218  Q
    | | |  |||||||| |||||||||||||| ||| ||||| || |||||| | ||||| | | ||||  ||||||| |||||||||||||||||||||||    
T  6481625 tcagacataactctaagatattatcaccctcaggcattgaagcctccaacttgttgcaattaataatcgacaatttctgtaaagaaggaaggtgttgagg 6481526  T
Q  219 cagggccattttcaatttgggacattctcttatataaagctctttaagcaaaggaaacccttcaagacacaaccattcctcccaattgttcatcttctca 318  Q
     |||||| |||||||||||||||| ||| |||||  ||||||||||||| |  ||||||||||| |||| |||||||||||| |||| | ||||  || |    
T  6481525 aagggcccttttcaatttgggacaatcttttatagtaagctctttaagcgacagaaacccttcatgacataaccattcctccaaattttccatccgctga 6481426  T
Q  319 aatttcaaaacttcaagagacctgaacagatcatttgttgaactactgtcgtaaaactcttcacctatgatctttattccatcacagtctgaaatagaaa 418  Q
    |||| |||||||||||||||||||||   |||| || ||||| || |  | || ||||||||||| |||||||||||||  | ||||| |||||||||||    
T  6481425 aattccaaaacttcaagagacctgaatgcatcaatttttgaattatttccatataactcttcaccgatgatctttattcttttacagtttgaaatagaaa 6481326  T
Q  419 gcatcttgagaaaggggagggtcccaagtggtggcaacaaagaacataatccacaaaactgtagattaagagatactaagtttggtaaatgataacccct 518  Q
    ||  | ||||| |||||||   |||||||||||||||   |||||||||||||||     | |  | ||||||||||||||| ||||||||| |||||||    
T  6481325 gctccctgagagaggggagttgcccaagtggtggcaaatgagaacataatccacagtgacgcatttgaagagatactaagttgggtaaatgacaacccct 6481226  T
Q  519 tatccaatttggaaatctattacctttgtattttgagatggtaagcctcttcaagtttctatttggttgaagagcctccaagactgacacagtgctttca 618  Q
    ||||||||||||||||||||||||| | |||| ||||||| |||||||||| ||| |||||||||||||||||||||||||||| |||||| ||||||||    
T  6481225 tatccaatttggaaatctattacctctatattgtgagatgctaagcctctttaagcttctatttggttgaagagcctccaagacagacacattgctttca 6481126  T
Q  619 gccattgactcatccatttctt 640  Q
     | ||||| ||||||| |||||    
T  6481125 actattgagtcatccacttctt 6481104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 19 - 596
Target Start/End: Original strand, 8469850 - 8470427
Alignment:
Q  19 aaaatatgctccacggagaactccgtgtaccggttttcatgaatgactaactttttcaagctggtcggcaattcatttaccaaaactctatcacatctct 118  Q
    ||||| ||||||||||||||||  | | |||  |||||| ||| ||| ||| ||||||||||||| |||||||||||||  ||||    |||||||||||    
T  8469850 aaaatttgctccacggagaacttggcgaaccaattttcacgaaagacgaaccttttcaagctggttggcaattcatttattaaaatgtgatcacatctct 8469949  T
Q  119 taacatctaactctatgatattatcacccttaggaattgatgcttccaacatcttgcactcattaatgaacaatttttgtaaagaaggaaggtgttgagg 218  Q
      | ||||||||||||||||||||||||||| ||||| ||||| || ||||  |  || ||| ||||    |||||||||||||||||||||||||||||    
T  8469950 gtagatctaactctatgatattatcacccttgggaatcgatgcctctaacagttcacagtcaataatctctaatttttgtaaagaaggaaggtgttgagg 8470049  T
Q  219 cagggccattttcaatttgggacattctcttatataaagctctttaagcaaaggaaacccttcaagacacaaccattcctcccaattgttcatcttctca 318  Q
    ||  ||  || |||||| ||||||   | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  8470050 caatgcgcttctcaattcgggacagctttttatagaaagctctttaagcaaaggaaacccttcaagacacaaccattcctcccaactgttcatcttcaca 8470149  T
Q  319 aatttcaaaacttcaagagacctgaacagatcatttgttgaactactgtcgtaaaactcttcacctatgatctttattccatcacagtctgaaatagaaa 418  Q
    ||||||||||||||||| |||  |||| || ||||||||||| |  || | | |||||||||||| || ||||||||||||| ||||||  | |||| ||    
T  8470150 aatttcaaaacttcaagggacaagaacggaacatttgttgaattgttgccatgaaactcttcaccaattatctttattccatgacagtcacagatagcaa 8470249  T
Q  419 gcatcttgagaaaggggagggtcccaagtggtggcaacaaaga-acataatccacaaaactgtagattaagagatactaagtttggtaaatgataacccc 517  Q
    ||  ||||||| | |||||    |||||||||||||| |  || |||| |||||||   |||||  ||||||||||||||||||||||||||| ||||||    
T  8470250 gctccttgagacacgggagctgtccaagtggtggcaa-atggagacatgatccacagctctgtaatttaagagatactaagtttggtaaatgacaacccc 8470348  T
Q  518 ttatccaatttggaaatctattacctttgtattttgagatggtaagcctcttcaagtttctatttggttgaagagcctc 596  Q
    ||||||| |||||||| || ||||||||||||| |||||||  |||||| ||||||||  |||||||||||||||||||    
T  8470349 ttatccactttggaaagcttttacctttgtattgtgagatgtaaagcctattcaagttgttatttggttgaagagcctc 8470427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 33 - 602
Target Start/End: Complemental strand, 8570680 - 8570111
Alignment:
Q  33 ggagaactccgtgtaccggttttcatgaatgactaactttttcaagctggtcggcaattcatttaccaaaactctatcacatctcttaacatctaactct 132  Q
    ||||||||| |||||||  |||  | ||| ||| ||| ||||||||||||  |||||||||||||||||||  |||||||||   |  | || |||||||    
T  8570680 ggagaactcggtgtaccaatttctacgaaggacaaacgttttcaagctggatggcaattcatttaccaaaatgctatcacattcatctagatataactct 8570581  T
Q  133 atgatattatcacccttaggaattgatgcttccaacatcttgcactcattaatgaacaatttttgtaaagaaggaaggtgttgaggcagggccattttca 232  Q
      |||||||||| |||| |||||||| || |||||| ||||||| ||| | ||   || |||||||||||||||||||||| ||||||||||| ||||||    
T  8570580 tcgatattatcagccttgggaattgaagcctccaacttcttgcaatcactgatctccagtttttgtaaagaaggaaggtgtcgaggcagggcccttttca 8570481  T
Q  233 atttgggacattctcttatataaagctctttaagcaaaggaaacccttcaagacacaaccattcctcccaattgttcatcttctcaaatttcaaaacttc 332  Q
    || || |||| | ||||||| |||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||    |||||| |||||||||    
T  8570480 atctgtgacaatatcttatagaaagctttttaagcaaaggaaacccttcaatacaaaaccattcctcccaattgttcatccatgcaaattccaaaacttc 8570381  T
Q  333 aagagacctgaacagatcatttgttgaactactgtcgtaaaactcttcacctatgatctttattccatcacagtctgaaatagaaagcatcttgagaaag 432  Q
    ||| ||||||||| ||  | ||||||||||| || ||||||||||||  || ||||| | ||| |||| ||| | |||||||||||||  ||||||| ||    
T  8570380 aagggacctgaacggaataattgttgaactattgccgtaaaactctttgccaatgatttctataccataacaatatgaaatagaaagctccttgagatag 8570281  T
Q  433 gggagggtcccaagtggtggcaacaaagaacataatccacaaaactgtagattaagagatactaagtttggtaaatgataaccccttatccaatttggaa 532  Q
    |||||   ||||||||| |||||||  |||||||||| |||    ||||| ||||||||||||||||| |||||| || ||||| ||| |||||||||||    
T  8570280 gggagctgcccaagtggcggcaacatggaacataatctacactggtgtagtttaagagatactaagttgggtaaaagaaaacccattaaccaatttggaa 8570181  T
Q  533 atctattacctttgtattttgagatggtaagcctcttcaagtttctatttggttgaagagcctccaagac 602  Q
    | ||| | || ||||| | || |||||| |||||||||||||| ||||||||||||||||| ||||||||    
T  8570180 agctactgccattgtagtatgtgatggtgagcctcttcaagttgctatttggttgaagagcatccaagac 8570111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 63 - 642
Target Start/End: Complemental strand, 6730421 - 6729842
Alignment:
Q  63 gactaactttttcaagctggtcggcaattcatttaccaaaactctatcacatctcttaacatctaactctatgatattatcacccttaggaattgatgct 162  Q
    |||||||||||||||||| ||||||||||||||||||||||  || ||||||| |   | || ||| |||||||||||||||||||| |||||||||||     
T  6730421 gactaactttttcaagctagtcggcaattcatttaccaaaatgctttcacatcccactagatgtaaatctatgatattatcacccttgggaattgatgcc 6730322  T
Q  163 tccaacatcttgcactcattaatgaacaatttttgtaaagaaggaaggtgttgaggcagggccattttcaatttgggacattctcttatataaagctctt 262  Q
    ||||||   |||||   |  |||   |||||||| |||||||||||||||||||||||||||| |||||| ||||||||| | |||||| | ||||||||    
T  6730321 tccaactctttgcaacaaacaatcttcaatttttctaaagaaggaaggtgttgaggcagggcccttttcagtttgggacaatttcttatttcaagctctt 6730222  T
Q  263 taagcaaaggaaacccttcaagacacaaccattcctcccaattgttcatcttctcaaatttcaaaacttcaagagacctgaacagatcatttgttgaact 362  Q
    |||| | ||||||| |||||| | | ||||||||||||||||| | ||  | |||||||||||| |||||||||||||||||  || || || ||||| |    
T  6730221 taagtagaggaaactcttcaataaataaccattcctcccaattctccaattgctcaaatttcaatacttcaagagacctgaatggaacaattattgaatt 6730122  T
Q  363 actgtcgtaaaactcttcacctatgatctttattccatcacagtctgaaatagaaagcatcttgagaaaggggagggtcccaagtggtggcaacaaagaa 462  Q
    | |  | || |||||||  || |||||||||||| ||| ||| |||||||||   |||   || ||||| |||||   ||||||||| |||||||  |||    
T  6730121 atttccatagaactctttgccgatgatctttattacattacaatctgaaatacggagctctttaagaaatgggagctgcccaagtggcggcaacagggaa 6730022  T
Q  463 cataatccacaaaactgtagattaagagatactaagtttggtaaatgataaccccttatccaatttggaaatctattacctttgtattttgagatggtaa 562  Q
    || | | ||||   | | || | ||||||||||||||| ||||||||| ||||||| | |||||||||||| |||||||||||||||  |||||| ||||    
T  6730021 caaatttcacagctccgcagttcaagagatactaagttgggtaaatgacaacccctcagccaatttggaaagctattacctttgtatcgtgagattgtaa 6729922  T
Q  563 gcctcttcaagtttctatttggttgaagagcctccaagactgacacagtgctttcagccattgactcatccatttcttct 642  Q
    | | ||||||||||||||||||||| |||||||||||||| |||||| |||||||| | |||||||||||||||||||||    
T  6729921 gtcacttcaagtttctatttggttgtagagcctccaagacagacacattgctttcaactattgactcatccatttcttct 6729842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 180; E-Value: 7e-97
Query Start/End: Original strand, 63 - 642
Target Start/End: Complemental strand, 6450493 - 6449914
Alignment:
Q  63 gactaactttttcaagctggtcggcaattcatttaccaaaactctatcacatctcttaacatctaactctatgatattatcacccttaggaattgatgct 162  Q
    |||||||||||||||||| ||||||||||||||||||||||  || ||| ||| |   | || ||| |||||||||||||||||||| |||||||||||     
T  6450493 gactaactttttcaagctagtcggcaattcatttaccaaaatgctttcatatcccactagatgtaaatctatgatattatcacccttgggaattgatgcc 6450394  T
Q  163 tccaacatcttgcactcattaatgaacaatttttgtaaagaaggaaggtgttgaggcagggccattttcaatttgggacattctcttatataaagctctt 262  Q
    ||||||   |||||   |  |||   |||||||| |||||||||||||||||||||||||||| |||||| ||||||||| | |||||| | ||||||||    
T  6450393 tccaactcattgcaacaaacaatcttcaatttttctaaagaaggaaggtgttgaggcagggcccttttcagtttgggacaatttcttatttcaagctctt 6450294  T
Q  263 taagcaaaggaaacccttcaagacacaaccattcctcccaattgttcatcttctcaaatttcaaaacttcaagagacctgaacagatcatttgttgaact 362  Q
    |||| | ||||||| |||||| | | ||||||||||||||||| | || || |||||||||||| ||||||||||| |||||  || || || ||||| |    
T  6450293 taagtagaggaaactcttcaataaataaccattcctcccaattctccaactgctcaaatttcaatacttcaagagatctgaatggaacaattattgaatt 6450194  T
Q  363 actgtcgtaaaactcttcacctatgatctttattccatcacagtctgaaatagaaagcatcttgagaaaggggagggtcccaagtggtggcaacaaagaa 462  Q
    | |  | || |||||||  || |||||||||||||||| ||| |||||||||   |||   || ||||| |||||   ||||||||| |||||||  |||    
T  6450193 atttccatagaactctttgccgatgatctttattccattacaatctgaaatacggagctctttaagaaatgggagctgcccaagtggcggcaacagggaa 6450094  T
Q  463 cataatccacaaaactgtagattaagagatactaagtttggtaaatgataaccccttatccaatttggaaatctattacctttgtattttgagatggtaa 562  Q
    || | | ||||   | | || | ||||||||||||||| ||||||||| ||||||| | |||||||||||| |||||||||||||||  |||||| ||||    
T  6450093 caaatttcacagctccgcagttcaagagatactaagttgggtaaatgacaacccctcagccaatttggaaagctattacctttgtatcgtgagattgtaa 6449994  T
Q  563 gcctcttcaagtttctatttggttgaagagcctccaagactgacacagtgctttcagccattgactcatccatttcttct 642  Q
    | ||||| | ||||||||||||||| |||||||||||||| |||||| |||||||| | |||||||||||||||||||||    
T  6449993 gtctctttaggtttctatttggttgtagagcctccaagacagacacattgctttcaactattgactcatccatttcttct 6449914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 28 - 644
Target Start/End: Original strand, 6945567 - 6946186
Alignment:
Q  28 tccacggagaactccgtgtaccggttttcatgaatgactaactttttcaagctggtcggcaattcatttaccaaaactctatcacatctcttaacatcta 127  Q
    |||||||||||||| |||||| | || |||  ||  | |||| |||||||  | |||||||||||||||||||||| ||||||||||||||  | |||||    
T  6945567 tccacggagaactcggtgtactgattatcacaaagtaataaccttttcaaatttgtcggcaattcatttaccaaaattctatcacatctctgtatatcta 6945666  T
Q  128 actctatgatattatcacccttaggaattgatgcttccaacatcttgcactcattaatgaacaatttttgtaaagaaggaaggtgttgaggcag---ggc 224  Q
    ||||||| |||||||||| ||| |||| |||| | ||||||   || ||  ||  ||    |||||||||||||||||||||||||||||||||   |||    
T  6945667 actctatcatattatcactcttgggaactgatacctccaactgtttacaaacacaaagttgcaatttttgtaaagaaggaaggtgttgaggcagcaaggc 6945766  T
Q  225 cattttcaatttgggacattctcttatataaagctctttaagcaaaggaaacccttcaagacacaaccattcctcccaattgttcatcttctcaaatttc 324  Q
    | |||||||||||||||| | |||||||  ||||||||||||||||||||||| |||| |||| ||||||||||||||||||  ||| | ||| ||||||    
T  6945767 ccttttcaatttgggacaatttcttatagtaagctctttaagcaaaggaaacctttcaggacaaaaccattcctcccaattgaccatatgctccaatttc 6945866  T
Q  325 aaaacttcaagagacctgaacagatcatttgttgaactactgtcgtaaaactcttcacctatgatctttattccatcacagtctgaaatagaaagcatct 424  Q
    ||||||||||| ||||||||| || ||||||||| |||| ||| |||||||||||| || |||||||||||||| | ||||| ||||||||||| |  ||    
T  6945867 aaaacttcaagggacctgaacggaacatttgttgtactattgttgtaaaactcttcgccgatgatctttattccgttacagtttgaaatagaaatctcct 6945966  T
Q  425 tgagaaaggggagggtcccaagtggtggcaacaaagaacataatccacaaaactgtagattaagagatactaagtttggtaaatgataaccccttatcca 524  Q
    ||||| ||||||    ||||||   ||| ||    ||||||| | ||||   ||  || ||||||||||||||||||| ||||||| |||| |||| |||    
T  6945967 tgagagaggggaactgcccaagcattggtaaatgggaacatagtacacagtccttcagtttaagagatactaagtttgataaatgaaaaccacttagcca 6946066  T
Q  525 atttggaaatctattacctttgtattttgagatggtaagcctcttcaagtttctatttggttgaagagcctccaagactgacacagtgctttcagccatt 624  Q
    ||||||||| ||| | || ||||| | || |||||| ||| |||||||||| || ||||||||||||||||| ||||| || ||| ||| |||| |  ||    
T  6946067 atttggaaagctactgccattgtagtatgtgatggtgagcttcttcaagttgctctttggttgaagagcctcaaagacagatacattgcattcaactttt 6946166  T
Q  625 gactcatccatttcttctct 644  Q
    ||  ||||||||||||||||    
T  6946167 gagccatccatttcttctct 6946186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 188 - 602
Target Start/End: Complemental strand, 6796185 - 6795777
Alignment:
Q  188 acaatttttgtaaagaaggaaggtgttgaggcagggccattttcaatttgggacattctcttatataaagctctttaagcaaaggaaacccttcaagaca 287  Q
    |||||||||||||||||||||||| ||||||| | ||| ||||||||| | ||||   | ||||||||||||||||||||||||||||||||||||||||    
T  6796185 acaatttttgtaaagaaggaaggttttgaggctgagcccttttcaattcgtgacaacttgttatataaagctctttaagcaaaggaaacccttcaagaca 6796086  T
Q  288 caaccattcctcccaattgttcatcttctcaaatttcaaaacttcaagagacctgaacagatcatttgttgaactactgtcgtaaaactcttcacctatg 387  Q
     ||||||||||||||||||| ||||| ||||||||||||||| ||||| |||||||||  | |||||||||||||| ||| |||||| |||||||| |||    
T  6796085 aaaccattcctcccaattgtccatctcctcaaatttcaaaacctcaagggacctgaacgaaacatttgttgaactattgttgtaaaattcttcaccaatg 6795986  T
Q  388 atctttattccatcacagtctgaaatagaaagcatcttgagaaaggggagggtcccaagtggtggcaacaaagaacataatccacaaaactgtagattaa 487  Q
    ||| ||||||| |||||   |||||| |||||   ||||||| |||||||   ||| |||| ||||||    |||||||||||| |    || || | ||    
T  6795985 atcattattccgtcacatcttgaaatggaaaggtccttgagagaggggagctgccctagtgctggcaaatcggaacataatccatagtcttgcagttgaa 6795886  T
Q  488 gagatactaagtttggtaaatgataaccccttatccaatttggaaatctattacctttgtattttgagatggtaagcctcttcaagtttctatttggttg 587  Q
    ||||||||||||| | |||||||      ||||||||||||||||| | |||||||||||||| ||||||||||||||| |||||||| ||||| |||||    
T  6795885 gagatactaagttggataaatga------cttatccaatttggaaagccattacctttgtattctgagatggtaagccttttcaagttgctattcggttg 6795792  T
Q  588 aagagcctccaagac 602  Q
    ||||||||| |||||    
T  6795791 aagagcctcaaagac 6795777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 28 - 602
Target Start/End: Original strand, 7586170 - 7586744
Alignment:
Q  28 tccacggagaactccgtgtaccggttttcatgaatgactaactttttcaagctggtcggcaattcatttaccaaaactctatcacatctcttaacatcta 127  Q
    |||||||||||||| |||||| | || |||  || || |||  |||||||  | |||||||||||||||||||||| ||||||||||||||| | |||||    
T  7586170 tccacggagaactcggtgtactgattatcacaaaggaataaacttttcaaatttgtcggcaattcatttaccaaaattctatcacatctctttatatcta 7586269  T
Q  128 actctatgatattatcacccttaggaattgatgcttccaacatcttgcactcattaatgaacaatttttgtaaagaaggaaggtgttgaggcagggccat 227  Q
    ||||||| |||||||||| ||| |||||| ||||||||||| ||||||| || |||||   || ||| |||||||||||||||||||||||||| ||| |    
T  7586270 actctatcatattatcacacttcggaattaatgcttccaacttcttgcaatctttaatctccagtttctgtaaagaaggaaggtgttgaggcagagccct 7586369  T
Q  228 tttcaatttgggacattctcttatataaagctctttaagcaaaggaaacccttcaagacacaaccattcctcccaattgttcatcttctcaaatttcaaa 327  Q
    |||||| |||||||||| | ||||| ||||||||||||||||||||||||||||||||    ||||||||||||| |    ||||   ||||| | || |    
T  7586370 tttcaacttgggacatttttttatagaaagctctttaagcaaaggaaacccttcaagatgtgaccattcctcccattccgacatcgaatcaaaatgcaga 7586469  T
Q  328 acttcaagagacctgaacagatcatttgttgaactactgtcgtaaaactcttcacctatgatctttattccatcacagtctgaaatagaaagcatcttga 427  Q
    | |||||| || |||||  || ||||||| ||| || || | ||||| ||||  ||||||||| |||||  ||||||| ||||||| |||| |   ||||    
T  7586470 atttcaagggatctgaatggaacatttgtggaattattgccataaaattctttccctatgatccttattttatcacagcctgaaattgaaatctctttga 7586569  T
Q  428 gaaaggggagggtcccaagtggtggcaacaaagaacataatccacaaaactgtagattaagagatactaagtttggtaaatgataaccccttatccaatt 527  Q
    || | |||||    |||||||||||||||   ||||||||  |||| |  | |||  |||  || |||||||| ||||||| | ||||||| ||||||||    
T  7586570 gacaagggagttgtccaagtggtggcaactcggaacataaagcacagagatttagtctaattgaaactaagttgggtaaatcacaacccctcatccaatt 7586669  T
Q  528 tggaaatctattacctttgtattttgagatggtaagcctcttcaagtttctatttggttgaagagcctccaagac 602  Q
    || ||| |||||||||||||| | ||||||| |||||||||||||| | |||||||||||||||||||| |||||    
T  7586670 tgcaaacctattacctttgtagtgtgagatgataagcctcttcaagctgctatttggttgaagagcctcaaagac 7586744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 28 - 300
Target Start/End: Complemental strand, 6841307 - 6841035
Alignment:
Q  28 tccacggagaactccgtgtaccggttttcatgaatgactaactttttcaagctggtcggcaattcatttaccaaaactctatcacatctcttaacatcta 127  Q
    ||||||||||||||||||||  | || |||  || || |||| ||||||||||||||||||||||||||||||||| ||||||||||||||  | |||||    
T  6841307 tccacggagaactccgtgtattgattatcacaaaggagtaaccttttcaagctggtcggcaattcatttaccaaaattctatcacatctctgtatatcta 6841208  T
Q  128 actctatgatattatcacccttaggaattgatgcttccaacatcttgcactcattaatgaacaatttttgtaaagaaggaaggtgttgaggcagggccat 227  Q
    ||||||| |||||||||| ||| ||||||||||| |||| | | ||||| ||   |||   || |||||||||||||||||||||||||||||| ||| |    
T  6841207 actctatcatattatcactcttgggaattgatgcctccatcttgttgcaatcccaaatctgcagtttttgtaaagaaggaaggtgttgaggcagagccct 6841108  T
Q  228 tttcaatttgggacattctcttatataaagctctttaagcaaaggaaacccttcaagacacaaccattcctcc 300  Q
    |||||||| |||||| | ||||||| ||| ||||||||||||||||||| || |||| || ||| ||||||||    
T  6841107 tttcaattcgggacaatttcttatagaaatctctttaagcaaaggaaactctccaaggcataacaattcctcc 6841035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 28 - 300
Target Start/End: Complemental strand, 6523216 - 6522944
Alignment:
Q  28 tccacggagaactccgtgtaccggttttcatgaatgactaactttttcaagctggtcggcaattcatttaccaaaactctatcacatctcttaacatcta 127  Q
    ||||||||||||||||||| ||| ||||    || || ||||||||||| ||| |||||||||||||||||||||| ||||||||| ||||  | |||||    
T  6523216 tccacggagaactccgtgttccgattttgccaaaggagtaactttttcaggctagtcggcaattcatttaccaaaattctatcacaactctgtatatcta 6523117  T
Q  128 actctatgatattatcacccttaggaattgatgcttccaacatcttgcactcattaatgaacaatttttgtaaagaaggaaggtgttgaggcagggccat 227  Q
    ||||||| |||||||||| ||| ||||||||||| |||| | | ||||| | | ||||   || |||||||||||||||||||||||||||||| ||| |    
T  6523116 actctatcatattatcacacttgggaattgatgcctccatcttgttgcaattactaatcttcagtttttgtaaagaaggaaggtgttgaggcagagccct 6523017  T
Q  228 tttcaatttgggacattctcttatataaagctctttaagcaaaggaaacccttcaagacacaaccattcctcc 300  Q
    |||||||| |||||| | ||||||| ||| ||||||||||||||||||| || |||| || ||| ||||||||    
T  6523016 tttcaattcgggacaatttcttatagaaatctctttaagcaaaggaaactctccaaggcataacaattcctcc 6522944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 163 - 624
Target Start/End: Complemental strand, 6528477 - 6528019
Alignment:
Q  163 tccaacatcttgcactcattaatgaacaatttttgtaaagaaggaaggtgttgaggcagggccattttcaatttgggacattctcttatataaagctctt 262  Q
    |||||| | ||||| | ||| ||| |||||||||||||||||||||| |||||||||| ||   |||||||||| ||||| | ||||||| |||||||||    
T  6528477 tccaacttgttgcaattatttatgcacaatttttgtaaagaaggaagctgttgaggcaaggtgcttttcaatttaggacaatttcttatagaaagctctt 6528378  T
Q  263 taagcaaaggaaacccttcaagacacaaccattcctcccaattgttcatcttctcaaatttcaaaacttcaagagacctgaacagatcatttgttgaact 362  Q
    ||||||||||||||| |   ||||| | ||||| |||||| ||   ||| ||||||||| || ||| || ||| ||| ||||  || || |||||||| |    
T  6528377 taagcaaaggaaacctt---agacatatccatttctcccagttcaccatattctcaaatatcgaaaattgaagggacttgaatggaacaattgttgaatt 6528281  T
Q  363 actgtcgtaaaactcttcacctatgatctttattccatcacagtctgaaatagaaagcatcttgagaaaggggagggtcccaagtggtggcaacaaagaa 462  Q
    | |||| ||||| |||||| | |||||||||||||| ||||| ||  |||  |||||  |||| ||| | |||||    ||||| ||||||||  | |||    
T  6528280 attgtcataaaaatcttcatcaatgatctttattccttcacaatcataaacggaaagtttcttaagagaagggagttgtccaaggggtggcaaacaggaa 6528181  T
Q  463 cataatccacaaaactgtagattaagagatactaagtttggtaaatgataaccccttatccaatttggaaatctattacctttgtattttgagatggtaa 562  Q
    ||||| ||||||   |  || | ||||||||||||||| |||||||||  |||||||| |||||||||||||||| |||||||||| | || |||| | |    
T  6528180 cataacccacaaccattcagttgaagagatactaagttgggtaaatgactaccccttagccaatttggaaatctactacctttgtagtgtgtgatgttga 6528081  T
Q  563 gcctcttcaagtttctatttggttgaagagcctccaagactgacacagtgctttcagccatt 624  Q
    || |||||||||| ||||||||||| | ||||||||||||| |||   ||||||||||||||    
T  6528080 gcttcttcaagttgctatttggttgtatagcctccaagactaacaggttgctttcagccatt 6528019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 193 - 602
Target Start/End: Complemental strand, 6840464 - 6840061
Alignment:
Q  193 ttttgtaaagaaggaaggtgttgaggcagg---gccattttcaatttgggacattctcttatataaagctctttaagcaaaggaaacccttcaagacaca 289  Q
    ||||||||||||| |||||||| ||||||    ||| |||||||||||||||||| ||||||| ||| || ||||||||||||||||||||||||||| |    
T  6840464 ttttgtaaagaagtaaggtgtttaggcagcactgcctttttcaatttgggacattttcttatagaaatctttttaagcaaaggaaacccttcaagacaaa 6840365  T
Q  290 accattcctcccaattgttcatcttctcaaatttcaaaacttcaagagacctgaacagatcatttgttgaactactgtcgtaaaactcttcacctatgat 389  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||  || || |||| |||    ||||||||||||||| | | |||||    
T  6840364 accatttctcccaattgttcatcttctcaaatttcaaaacttcaagcgacctaaatggaacaattgtcgaatcgttgtcgtaaaactcttgatcgatgat 6840265  T
Q  390 ctttattccatcacagtctgaaatagaaagcatcttgagaaaggggagggtcccaagtggtggcaacaaagaacataatccacaaaactgtagattaaga 489  Q
    ||||||| ||||||||||  ||| ||||||| |  ||||| |||||||   | ||||| | ||         ||||| ||||||    |  || | ||||    
T  6840264 ctttatttcatcacagtcacaaacagaaagctttctgagagaggggagctgctcaagtcgggg---------acatagtccacatccatccagttgaaga 6840174  T
Q  490 gatactaagtttggtaaatgataaccccttatccaatttggaaatctattacctttgtattttgagatggtaagcctcttcaagtttctatttggttgaa 589  Q
    ||||||||||| | ||||||| || |||||| |||| ||||||| |||||||||||||| | |   ||| | ||| ||| |||||| |||||||||||||    
T  6840173 gatactaagttggataaatgacaagcccttagccaacttggaaagctattacctttgtagtgttttatgttgagcttctccaagttgctatttggttgaa 6840074  T
Q  590 gagcctccaagac 602  Q
    ||||||| |||||    
T  6840073 gagcctcaaagac 6840061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 26 - 300
Target Start/End: Original strand, 6733971 - 6734245
Alignment:
Q  26 gctccacggagaactccgtgtaccggttttcatgaatgactaactttttcaagctggtcggcaattcatttaccaaaactctatcacatctcttaacatc 125  Q
    ||||||| |||||||| |||||| | ||||||  || ||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||   | |||    
T  6733971 gctccacagagaactcggtgtactgattttcagaaaggactaactttttcaaactggtaggcaattcatttaccaaaattctatcacatctccgtatatc 6734070  T
Q  126 taactctatgatattatcacccttaggaattgatgcttccaacatcttgcactcattaatgaacaatttttgtaaagaaggaaggtgttgaggcagggcc 225  Q
    ||||||||| |||||||||| |||||||||||||||||||||| | ||||| ||  ||||   || ||| |||||||||||||||||||| ||||| |||    
T  6734071 taactctatcatattatcacacttaggaattgatgcttccaacttgttgcaatctctaatctccagtttctgtaaagaaggaaggtgttgtggcagagcc 6734170  T
Q  226 attttcaatttgggacattctcttatataaagctctttaagcaaaggaaacccttcaagacacaaccattcctcc 300  Q
     |||||||||  | |||||    |||| |||  |||||||||||||||||| || |||| || ||||||||||||    
T  6734171 cttttcaattcagaacatttgaatatagaaatatctttaagcaaaggaaactctccaaggcataaccattcctcc 6734245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 26 - 300
Target Start/End: Complemental strand, 6781692 - 6781418
Alignment:
Q  26 gctccacggagaactccgtgtaccggttttcatgaatgactaactttttcaagctggtcggcaattcatttaccaaaactctatcacatctcttaacatc 125  Q
    ||||||| |||||||| |||||| | ||||||  || ||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||   | |||    
T  6781692 gctccacagagaactcggtgtactgattttcagaaaggactaactttttcaaactggtaggcaattcatttaccaaaattctatcacatctccgtatatc 6781593  T
Q  126 taactctatgatattatcacccttaggaattgatgcttccaacatcttgcactcattaatgaacaatttttgtaaagaaggaaggtgttgaggcagggcc 225  Q
    ||||||||| |||||||||| |||||||||||||||||||||| | ||||| ||  ||||   || ||| |||||||||||||||||||| ||||| |||    
T  6781592 taactctatcatattatcacacttaggaattgatgcttccaacttgttgcaatctctaatctccagtttctgtaaagaaggaaggtgttgtggcagagcc 6781493  T
Q  226 attttcaatttgggacattctcttatataaagctctttaagcaaaggaaacccttcaagacacaaccattcctcc 300  Q
     |||||||||  | |||||    |||| |||  |||||||||||||||||| || |||| || ||||||||||||    
T  6781492 cttttcaattcagaacatttgaatatagaaatatctttaagcaaaggaaactctccaaggcataaccattcctcc 6781418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 517 - 644
Target Start/End: Original strand, 8588525 - 8588652
Alignment:
Q  517 cttatccaatttggaaatctattacctttgtattttgagatggtaagcctcttcaagtttctatttggttgaagagcctccaagactgacacagtgcttt 616  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  8588525 cttatccaatttggaaacctattgcctttgtattttgagatggtaagcctcttcaagtttctatttggttgaagagcctccaagacagacacattgcttt 8588624  T
Q  617 cagccattgactcatccatttcttctct 644  Q
    || | ||||| |||||||||||||||||    
T  8588625 caactattgagtcatccatttcttctct 8588652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 163 - 599
Target Start/End: Complemental strand, 6556043 - 6555610
Alignment:
Q  163 tccaacatcttgcactcattaatgaacaatttttgtaaagaaggaaggtgttgaggcagggccattttcaatttgggacattctcttatataaagctctt 262  Q
    |||||||| ||||| ||||| ||  |||| ||||||||||| ||||| ||||||||||   |  |||||||||| ||||| | |  ||||||||||||||    
T  6556043 tccaacatgttgcaatcattgatccacaaattttgtaaagatggaagatgttgaggcaatactcttttcaatttaggacaattttctatataaagctctt 6555944  T
Q  263 taagcaaaggaaacccttcaagacacaaccattcctcccaattgttcatcttctcaaatttcaaaacttcaagagacctgaacagatcatttgttgaact 362  Q
    |||||| |||||||| | ||   || | |||||||||||| |||  ||| | ||||||| |||||  |||||| ||| ||||  || || |||||||| |    
T  6555943 taagcagaggaaaccttaca---catatccattcctcccagttgaccatatcctcaaatctcaaatattcaagggacttgaatggaacaattgttgaatt 6555847  T
Q  363 actgtcgtaaaactcttcacctatgatctttattccatcacagtctgaaatagaaagcatcttgagaaaggggagggtcccaagtggtggcaacaaagaa 462  Q
    | || | |||||||||||| | |||||||||||||| ||||||||  |||| |||||  |||||||| | |||||    ||||||| ||||||  | |||    
T  6555846 attgccataaaactcttcatcaatgatctttattccttcacagtcataaatggaaagtttcttgagagaagggagttgtccaagtgttggcaaacaggaa 6555747  T
Q  463 cataatccacaaaactgtagattaagagatactaagtttggtaaatgataaccccttatccaatttggaaatctattacctttgtattttgagatggtaa 562  Q
    |||||   ||||  ||  || | ||||||||||||||| ||||||||| ||||||||| |||||||||||||||| |||||||||| | ||  ||| | |    
T  6555746 cataacttacaacccttaagttcaagagatactaagttgggtaaatgacaaccccttagccaatttggaaatctactacctttgtagtgtgtaatgttga 6555647  T
Q  563 gcctcttcaagtttctatttggttgaagagcctccaa 599  Q
    || |||||||||| ||||||||||  |||||||||||    
T  6555646 gcttcttcaagttgctatttggttttagagcctccaa 6555610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 30 - 300
Target Start/End: Complemental strand, 6556446 - 6556176
Alignment:
Q  30 cacggagaactccgtgtaccggttttcatgaatgactaactttttcaagctggtcggcaattcatttaccaaaactctatcacatctcttaacatctaac 129  Q
    ||||||||||||||||||||| |||    ||| || ||||||||||| ||| |||||||||||||||||||||| |||||||||  |||  | |||||||    
T  6556446 cacggagaactccgtgtaccgatttcgccgaaggagtaactttttcaggctagtcggcaattcatttaccaaaattctatcacaattctgtatatctaac 6556347  T
Q  130 tctatgatattatcacccttaggaattgatgcttccaacatcttgcactcattaatgaacaatttttgtaaagaaggaaggtgttgaggcagggccattt 229  Q
    ||||| |||||||||| ||| ||||||||||| ||||||   ||||| |||   |    || |||||||||||||||||||||||||||||| ||| |||    
T  6556346 tctatcatattatcactcttgggaattgatgcctccaactcgttgcaatcaaatacacccagtttttgtaaagaaggaaggtgttgaggcagagcccttt 6556247  T
Q  230 tcaatttgggacattctcttatataaagctctttaagcaaaggaaacccttcaagacacaaccattcctcc 300  Q
    |||||| | |||| | ||||||| ||| | ||||||||||||||||| || |||| || ||| ||||||||    
T  6556246 tcaattcgagacaatttcttatagaaaacactttaagcaaaggaaactctccaaggcataacaattcctcc 6556176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 189 - 624
Target Start/End: Original strand, 6734413 - 6734842
Alignment:
Q  189 caatttttgtaaagaaggaaggtgttgaggcagggccattttcaatttgggacattctcttatataaagctctttaagcaaaggaaacccttcaagacac 288  Q
    ||||||||||||||||||||| |||||||||||||    ||||| ||| ||||| | | ||||| |||||||| ||||||||||||||| | ||   ||     
T  6734413 caatttttgtaaagaaggaagatgttgaggcagggtgcctttcagtttaggacaatttgttatagaaagctctataagcaaaggaaaccttaca---cat 6734509  T
Q  289 aaccattcctcccaattgttcatcttctcaaatttcaaaacttcaagagacctgaacagatcatttgttgaactactgtcgtaaaactcttcacctatga 388  Q
    | |||||||||||| |||  ||| | ||||||| |||||  |||||| ||| ||||  || || |||||||| || || | |||||||||||| | ||||    
T  6734510 atccattcctcccagttgaccatatcctcaaatctcaaatattcaagggacttgaatggaacaattgttgaattattgccataaaactcttcatcaatga 6734609  T
Q  389 tctttattccatcacagtctgaaatagaaagcatcttgagaaaggggagggtcccaagtggtggcaacaaagaacataatccacaaaactgtagattaag 488  Q
    |||||||||| ||||||||  |||| |||||  |||||||| | |||||    ||||||  ||||||  | ||||||   | ||||   |  || | |||    
T  6734610 tctttattccttcacagtcataaatggaaagtttcttgagagaagggagttgtccaagtattggcaaacaggaacat---ctacaaccattcagttcaag 6734706  T
Q  489 agatactaagtttggtaaatgataaccccttatccaatttggaaatctattacctttgtattttgagatggtaagcctcttcaagtttctatttggttga 588  Q
    ||||||||||||  ||||||||  |||||||| |||||||||||||||| |||||||||| | || |||| | ||| |||||||||| ||||||||||      
T  6734707 agatactaagttgcgtaaatgactaccccttagccaatttggaaatctactacctttgtagtgtgtgatgttgagcttcttcaagttgctatttggtttt 6734806  T
Q  589 agagcctccaagactgacacagtgctttcagccatt 624  Q
    ||||||||||||||| ||||| | |||||| |||||    
T  6734807 agagcctccaagactaacacacttctttcatccatt 6734842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 66 - 300
Target Start/End: Complemental strand, 6528709 - 6528475
Alignment:
Q  66 taactttttcaagctggtcggcaattcatttaccaaaactctatcacatctcttaacatctaactctatgatattatcacccttaggaattgatgcttcc 165  Q
    |||| ||||||| || ||||| |||||||||||||||| |||||||||| |||  | |||||||||||| |||||||||| ||| ||||||| ||| |||    
T  6528709 taaccttttcaaactcgtcggaaattcatttaccaaaattctatcacatgtctgtatatctaactctatcatattatcacacttgggaattgttgcctcc 6528610  T
Q  166 aacatcttgcactcattaatgaacaatttttgtaaagaaggaaggtgttgaggcagggccattttcaatttgggacattctcttatataaagctctttaa 265  Q
    | | |  |||| ||| ||||   || |||||||||||||||||||||||||||||| ||| ||||||||| ||||||   | ||||| ||| ||||||||    
T  6528609 atcttgctgcaatcaataatctccagtttttgtaaagaaggaaggtgttgaggcagagcccttttcaattcgggacaacttgttatagaaatctctttaa 6528510  T
Q  266 gcaaaggaaacccttcaagacacaaccattcctcc 300  Q
    ||||||||||| || |||| || ||||||||||||    
T  6528509 gcaaaggaaactctccaaggcataaccattcctcc 6528475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 190 - 344
Target Start/End: Original strand, 8588273 - 8588427
Alignment:
Q  190 aatttttgtaaagaaggaaggtgttgaggcagggccattttcaatttgggacattctcttatataaagctctttaagcaaaggaaacccttcaagacaca 289  Q
    |||||||||||||||||||||||||||||||  ||| |||||||||  |||||||| |||||| | |||| |||||||||||||||||||| ||| || |    
T  8588273 aatttttgtaaagaaggaaggtgttgaggcaaagcccttttcaattcaggacattcacttataaatagctttttaagcaaaggaaacccttgaaggcata 8588372  T
Q  290 accattcctcccaattgttcatcttctcaaatttcaaaacttcaagagacctgaa 344  Q
     ||||||||||||||||| ||||   | ||||| |||||||||||||||||||||    
T  8588373 tccattcctcccaattgtccatccgtttaaattccaaaacttcaagagacctgaa 8588427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 71 - 221
Target Start/End: Original strand, 6942278 - 6942428
Alignment:
Q  71 ttttcaagctggtcggcaattcatttaccaaaactctatcacatctcttaacatctaactctatgatattatcacccttaggaattgatgcttccaacat 170  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||  | |||||||||||| |||||||||| ||| ||||||||||| |||| | |    
T  6942278 ttttcaagctggtcggcaattcatttaccaaaattctatcacatctctgtatatctaactctatcatattatcacacttgggaattgatgcctccatctt 6942377  T
Q  171 cttgcactcattaatgaacaatttttgtaaagaaggaaggtgttgaggcag 221  Q
     ||||| | |  |||   || ||||||||||||||||||||||||||||||    
T  6942378 gttgcaataaccaatcttcagtttttgtaaagaaggaaggtgttgaggcag 6942428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 189 - 624
Target Start/End: Complemental strand, 6521705 - 6521279
Alignment:
Q  189 caatttttgtaaagaaggaaggtgttgaggcagggccattttcaatttgggacattctcttatataaagctctttaagcaaaggaaacccttcaagacac 288  Q
    ||||||||||||||||| |||||||||||||||||   |||||||||| ||||| | | ||||||||||||||||||||| |||||||| |   | |||     
T  6521705 caatttttgtaaagaagaaaggtgttgaggcagggtgcttttcaatttaggacaattttttatataaagctctttaagcagaggaaacctt---acacat 6521609  T
Q  289 aaccattcctcccaattgttcatcttctcaaatttcaaaacttcaagagacctgaacagatcatttgttgaactactgtcgtaaaactcttcacctatga 388  Q
    | |||||||||||| |||  ||| | || |||| |||||  || ||| ||| ||||  || || |||||||| || || | ||||| |||||| | ||||    
T  6521608 atccattcctcccagttgaccatatcctgaaatctcaaatattgaagggacttgaatggaacaattgttgaattattgccataaaaatcttcatcaatga 6521509  T
Q  389 tctttattccatcacagtctgaaatagaaagcatcttgagaaaggggagggtcccaagtggtggcaacaaagaacataatccacaaaactgtagattaag 488  Q
    |||||||||| ||||||||  |||| |||||  |||||||| | |||||    ||||||| ||||||  | ||||   ||| ||||  ||  || | |||    
T  6521508 tctttattccttcacagtcataaatggaaagtttcttgagagaagggagttgtccaagtgttggcaaacaggaac---atctacaatccttcagttgaag 6521412  T
Q  489 agatactaagtttggtaaatgataaccccttatccaatttggaaatctattacctttgtattttgagatggtaagcctcttcaagtttctatttggttga 588  Q
    |||||||||||| ||||||||| || | |    |||||||||||||||| ||||||||||   || |||| | ||| |||||||||| ||||||| |||     
T  6521411 agatactaagttgggtaaatgacaatcac---gccaatttggaaatctactacctttgtagcgtgtgatgttgagcttcttcaagttgctatttgattgt 6521315  T
Q  589 agagcctccaagactgacacagtgctttcagccatt 624  Q
    | ||||||||||||| |||   ||||||||||||||    
T  6521314 atagcctccaagactaacaggttgctttcagccatt 6521279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 71 - 455
Target Start/End: Complemental strand, 6593037 - 6592653
Alignment:
Q  71 ttttcaagctggtcggcaattcatttaccaaaactctatcacatctcttaacatctaactctatgatattatcacccttaggaattgatgcttccaacat 170  Q
    ||||||||||||  ||  ||||||||| |||||    |||||||||||| |  |||| |||  ||||||||||| |||| |||||||| || |||||| |    
T  6593037 ttttcaagctggatggatattcatttatcaaaatgtcatcacatctcttcagttctagctcagtgatattatcagccttgggaattgaagcctccaac-t 6592939  T
Q  171 cttg-cactcattaatgaacaatttttgtaaagaaggaaggtgttgaggcagggccattttcaatttgggacattctcttatataaagctctttaagcaa 269  Q
    |||| || ||| ||||   ||||||||| ||||||||||||||||||||||||||  ||||||| |||||||| | | ||||| ||||||||| ||||||    
T  6592938 cttggcaatcagtaatctccaatttttgcaaagaaggaaggtgttgaggcagggctcttttcaacttgggacaatgttttatacaaagctcttgaagcaa 6592839  T
Q  270 aggaaacccttcaagacacaaccattcctcccaattgttcatcttctcaaatttcaaaacttcaagagacctgaacagatcatttgttgaactactgtcg 369  Q
    ||| || ||||||||||| |||||||||| ||| |    ||| |||||||||  |||   ||||||  | || ||  || |||||| |||| ||  | ||    
T  6592838 agggaaaccttcaagacataaccattccttccattcagacatgttctcaaatcgcaatgtttcaaggaatctaaatggaacatttgatgaattatagccg 6592739  T
Q  370 taaaactcttcacctatgatctttattccatcacagtctgaaatagaaagcatcttgagaaaggggagggtcccaagtggtggcaa 455  Q
    ||||| |||  ||| ||||||| ||||||||||||| ||||||  |||||| |||||||| ||||||    |||||||||||||||    
T  6592738 taaaattctgtaccaatgatctctattccatcacagcctgaaaaggaaagcttcttgagagaggggaactgcccaagtggtggcaa 6592653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 68 - 402
Target Start/End: Original strand, 6931937 - 6932266
Alignment:
Q  68 actttttcaagctggtcggcaattcatttaccaaaactctatcacatctcttaacatctaactctatgatattatcacccttaggaattgatgcttccaa 167  Q
    |||||||||||| || ||||||||||||||| ||||  | |||  ||| ||| | ||   |||||||| |||||| |  |||||||||||| || || ||    
T  6931937 actttttcaagcaggccggcaattcatttactaaaatgccatcttatcacttcagat---actctatggtattatgaaacttaggaattgaagcctcaaa 6932033  T
Q  168 catcttgcactcattaatgaacaatttttgtaaagaaggaaggtgttgaggcagggccattttcaatttgggacattctcttatataaagctctttaagc 267  Q
    | | | ||| ||| ||||   || ||||||||||||||||||||||||||| || ||| ||||||||| | | ||| |||||   ||||||||| |||||    
T  6932034 cttgtggcaatcactaatctccagtttttgtaaagaaggaaggtgttgaggaagagcccttttcaattcgagccatcctcttgagtaaagctctctaagc 6932133  T
Q  268 aaaggaaacccttcaagacacaaccattcctcccaattgttcatcttctcaaatttcaaaacttcaagagacctgaacagatcatttgttgaactactgt 367  Q
    ||||||||||| |||||||| |||||||||||| ||   | |||||  |||||| ||||||||||||| ||||| ||  ||  | |||||  | || |||    
T  6932134 aaaggaaacccatcaagacataaccattcctccaaacaatgcatctagtcaaatatcaaaacttcaagggacctaaatggaaaaattgtt--attattgt 6932231  T
Q  368 cgtaaaactcttcacctatgatctttattccatca 402  Q
    ||||||| |||||||  |||||||||||| |||||    
T  6932232 cgtaaaattcttcactgatgatctttatttcatca 6932266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 192 - 300
Target Start/End: Complemental strand, 6521972 - 6521864
Alignment:
Q  192 tttttgtaaagaaggaaggtgttgaggcagggccattttcaatttgggacattctcttatataaagctctttaagcaaaggaaacccttcaagacacaac 291  Q
    |||||||||||||||||||||||||||||| ||| ||||||||| |||||| | ||||||| ||| ||||||||||||||||||| || |||| || |||    
T  6521972 tttttgtaaagaaggaaggtgttgaggcagagcccttttcaattcgggacaatttcttatagaaatctctttaagcaaaggaaactctccaaggcataac 6521873  T
Q  292 cattcctcc 300  Q
     ||||||||    
T  6521872 aattcctcc 6521864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 192 - 300
Target Start/End: Complemental strand, 6522377 - 6522269
Alignment:
Q  192 tttttgtaaagaaggaaggtgttgaggcagggccattttcaatttgggacattctcttatataaagctctttaagcaaaggaaacccttcaagacacaac 291  Q
    |||||||||||||||||||||||||||||| ||| ||||||||| |||||| | ||||||| ||| ||||||||||||||||||| || |||| || |||    
T  6522377 tttttgtaaagaaggaaggtgttgaggcagagcccttttcaattcgggacaatttcttatagaaatctctttaagcaaaggaaactctccaaggcataac 6522278  T
Q  292 cattcctcc 300  Q
     ||||||||    
T  6522277 aattcctcc 6522269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 192 - 300
Target Start/End: Complemental strand, 6522917 - 6522809
Alignment:
Q  192 tttttgtaaagaaggaaggtgttgaggcagggccattttcaatttgggacattctcttatataaagctctttaagcaaaggaaacccttcaagacacaac 291  Q
    |||||||||||||||||||||||||||||| ||| ||||||||| |||||| | ||||||| ||| ||||||||||||||||||| || |||| || |||    
T  6522917 tttttgtaaagaaggaaggtgttgaggcagagcccttttcaattcgggacaatttcttatagaaatctctttaagcaaaggaaactctccaaggcataac 6522818  T
Q  292 cattcctcc 300  Q
     ||||||||    
T  6522817 aattcctcc 6522809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 193 - 300
Target Start/End: Complemental strand, 6841007 - 6840900
Alignment:
Q  193 ttttgtaaagaaggaaggtgttgaggcagggccattttcaatttgggacattctcttatataaagctctttaagcaaaggaaacccttcaagacacaacc 292  Q
    ||||||||||||||||||||||||||||| ||| ||||||||| |||||| | ||||||| ||| ||||||||||||||||||| || |||| || |||     
T  6841007 ttttgtaaagaaggaaggtgttgaggcagagcccttttcaattcgggacaatttcttatagaaatctctttaagcaaaggaaactctccaaggcataaca 6840908  T
Q  293 attcctcc 300  Q
    ||||||||    
T  6840907 attcctcc 6840900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 69 - 298
Target Start/End: Original strand, 6898431 - 6898660
Alignment:
Q  69 ctttttcaagctggtcggcaattcatttaccaaaactctatcacatctcttaacatctaactctatgatattatcacccttaggaattgatgcttccaac 168  Q
    ||||||||||||||  ||||||||||||| |||||  | |||||||||||| |  |||| |||  ||||||||||| |||| |||||||| || | ||||    
T  6898431 ctttttcaagctggatggcaattcatttatcaaaatgccatcacatctctttagttctagctcactgatattatcagccttgggaattgaagcctgcaac 6898530  T
Q  169 atcttg-cactcattaatgaacaatttttgtaaagaaggaaggtgttgaggcagggccattttcaatttgggacattctcttatataaagctctttaagc 267  Q
     ||||| || ||| ||||   ||| ||||| |||||||||||||||||||||||||   ||||||| || ||||| | | | ||| ||||||||| ||||    
T  6898531 -tcttggcaatcaataattttcaacttttgcaaagaaggaaggtgttgaggcagggaacttttcaacttcggacaatgtttgatacaaagctcttgaagc 6898629  T
Q  268 aaaggaaacccttcaagacacaaccattcct 298  Q
    ||| |||| | ||||||||| ||||||||||    
T  6898630 aaatgaaaacattcaagacataaccattcct 6898660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 192 - 300
Target Start/End: Complemental strand, 6522107 - 6521999
Alignment:
Q  192 tttttgtaaagaaggaaggtgttgaggcagggccattttcaatttgggacattctcttatataaagctctttaagcaaaggaaacccttcaagacacaac 291  Q
    ||||||||||||||||||||||||| |||| ||| ||||||||| |||||| | ||||||| ||| ||||||||||||||||||| || |||| || |||    
T  6522107 tttttgtaaagaaggaaggtgttgatgcagagcccttttcaattcgggacaatttcttatagaaatctctttaagcaaaggaaactctccaaggcataac 6522008  T
Q  292 cattcctcc 300  Q
     ||||||||    
T  6522007 aattcctcc 6521999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 192 - 300
Target Start/End: Complemental strand, 6522647 - 6522539
Alignment:
Q  192 tttttgtaaagaaggaaggtgttgaggcagggccattttcaatttgggacattctcttatataaagctctttaagcaaaggaaacccttcaagacacaac 291  Q
    |||||||||||||||||||||||||||||| ||| ||||||||| |||||| | | ||||| ||| ||||||||||||||||||| || |||| || |||    
T  6522647 tttttgtaaagaaggaaggtgttgaggcagagcccttttcaattcgggacaatttgttatagaaatctctttaagcaaaggaaactctccaaggcataac 6522548  T
Q  292 cattcctcc 300  Q
     ||||||||    
T  6522547 aattcctcc 6522539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 192 - 300
Target Start/End: Complemental strand, 6840600 - 6840492
Alignment:
Q  192 tttttgtaaagaaggaaggtgttgaggcagggccattttcaatttgggacattctcttatataaagctctttaagcaaaggaaacccttcaagacacaac 291  Q
    |||||||||||||||||||||||| ||||| ||| |||||||||||||||| ||   |||||||| ||||||||||||||||||| || |||| || |||    
T  6840600 tttttgtaaagaaggaaggtgttgtggcagagcccttttcaatttgggacaatcgaatatataaatctctttaagcaaaggaaactctccaaggcataac 6840501  T
Q  292 cattcctcc 300  Q
     ||||||||    
T  6840500 aattcctcc 6840492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 193 - 300
Target Start/End: Complemental strand, 6522241 - 6522134
Alignment:
Q  193 ttttgtaaagaaggaaggtgttgaggcagggccattttcaatttgggacattctcttatataaagctctttaagcaaaggaaacccttcaagacacaacc 292  Q
    |||||||||||||||||||||||| |||| ||| ||||||||| |||||| | ||||||| ||| ||||||||||||||||||| || |||| || |||     
T  6522241 ttttgtaaagaaggaaggtgttgatgcagagcccttttcaattcgggacaatttcttatagaaatctctttaagcaaaggaaactctccaaggcataaca 6522142  T
Q  293 attcctcc 300  Q
    ||||||||    
T  6522141 attcctcc 6522134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 214 - 407
Target Start/End: Complemental strand, 6486543 - 6486350
Alignment:
Q  214 tgaggcagggccattttcaatttgggacattctcttatataaagctctttaagcaaaggaaacccttcaagacacaaccattcctcccaattgttcatct 313  Q
    |||||||  ||| ||||||||| | | ||| ||||| | ||||||||||| |||||||||||||| |||||||| ||||| |||||| ||   | |||||    
T  6486543 tgaggcaaagcccttttcaattcgagccatcctcttgtgtaaagctctttcagcaaaggaaacccatcaagacataaccagtcctccaaacaatgcatct 6486444  T
Q  314 tctcaaatttcaaaacttcaagagacctgaacagatcatttgttgaactactgtcgtaaaactcttcacctatgatctttattccatcacagtc 407  Q
      |||||| ||||||||||||| ||||| ||  ||  | |||||||| || |||||||||| |||||||  |||||||||||| ||||| ||||    
T  6486443 agtcaaatatcaaaacttcaagggacctaaatggaaaaattgttgaattattgtcgtaaaattcttcactgatgatctttatttcatcagagtc 6486350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 192 - 300
Target Start/End: Complemental strand, 6840738 - 6840627
Alignment:
Q  192 tttttgtaaagaaggaaggtgttgaggcag---ggccattttcaatttgggacattctcttatataaagctctttaagcaaaggaaacccttcaagacac 288  Q
    ||||||||||||||||||||||||||| ||   |||| |||| |||||||| || | ||||||| ||| ||||||||||||||||| ||||||||||||     
T  6840738 tttttgtaaagaaggaaggtgttgaggtagcaaggccctttttaatttggggcaatttcttatagaaatctctttaagcaaaggaatcccttcaagacaa 6840639  T
Q  289 aaccattcctcc 300  Q
    ||||||| ||||    
T  6840638 aaccatttctcc 6840627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 189 - 298
Target Start/End: Original strand, 6915564 - 6915673
Alignment:
Q  189 caatttttgtaaagaaggaaggtgttgaggcagggccattttcaatttgggacattctcttatataaagctctttaagcaaaggaaacccttcaagacac 288  Q
    ||||||||| |||||||||||||||||||||||||   ||||||| |||||||| | | ||||| ||||||||| ||||||||| || | |||||||||     
T  6915564 caatttttgcaaagaaggaaggtgttgaggcagggaacttttcaacttgggacaatgttttatacaaagctcttgaagcaaagggaaacattcaagacat 6915663  T
Q  289 aaccattcct 298  Q
    ||||||||||    
T  6915664 aaccattcct 6915673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 192 - 300
Target Start/End: Complemental strand, 6556149 - 6556041
Alignment:
Q  192 tttttgtaaagaaggaaggtgttgaggcagggccattttcaatttgggacattctcttatataaagctctttaagcaaaggaaacccttcaagacacaac 291  Q
    ||||||||||||||||||||||||||| || ||| ||||||||| |||||| | ||||||  ||| ||||||||||||||||||| || |||| || ||     
T  6556149 tttttgtaaagaaggaaggtgttgaggaagagcccttttcaattcgggacaatttcttattaaaaactctttaagcaaaggaaactctccaaggcataaa 6556050  T
Q  292 cattcctcc 300  Q
    |||||||||    
T  6556049 cattcctcc 6556041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 193 - 300
Target Start/End: Complemental strand, 6840872 - 6840765
Alignment:
Q  193 ttttgtaaagaaggaaggtgttgaggcagggccattttcaatttgggacattctcttatataaagctctttaagcaaaggaaacccttcaagacacaacc 292  Q
    ||||||||||||||||||||||||||||| ||| ||||||||| |||||| ||   |||| ||| ||||||||||||||||||| || |||| || |||     
T  6840872 ttttgtaaagaaggaaggtgttgaggcagagcccttttcaattcgggacaatcggatatagaaatctctttaagcaaaggaaactctccaaggcataaca 6840773  T
Q  293 attcctcc 300  Q
    ||||||||    
T  6840772 attcctcc 6840765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 85 - 298
Target Start/End: Complemental strand, 6723749 - 6723536
Alignment:
Q  85 ggcaattcatttaccaaaactctatcacatctcttaacatctaactctatgatattatcacccttaggaattgatgcttccaacatcttg-cactcatta 183  Q
    ||||||||||||| |||||    |||||||||||| |  |||| ||   ||||||||||| |||| |||||||| || |||| | ||||| || ||| ||    
T  6723749 ggcaattcatttatcaaaatatcatcacatctctttagttctagcttactgatattatcagccttgggaattgaagcctccagc-tcttggcaatcaata 6723651  T
Q  184 atgaacaatttttgtaaagaaggaaggtgttgaggcagggccattttcaatttgggacattctcttatataaagctctttaagcaaaggaaacccttcaa 283  Q
    ||   ||||||||| || ||||||||||||||||||||||   ||||||| |||||||| | | ||||| |||||||||  |||||||| || |||||||    
T  6723650 atctccaatttttgcaatgaaggaaggtgttgaggcagggaacttttcaacttgggacaatgttttatacaaagctcttgtagcaaagggaaaccttcaa 6723551  T
Q  284 gacacaaccattcct 298  Q
    |||| ||||||||||    
T  6723550 gacataaccattcct 6723536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 85 - 298
Target Start/End: Original strand, 6880875 - 6881088
Alignment:
Q  85 ggcaattcatttaccaaaactctatcacatctcttaacatctaactctatgatattatcacccttaggaattgatgcttccaacatcttg-cactcatta 183  Q
    ||||||||||||| |||||    |||||||||||| |  |||| |||  |||||||| || |||| |||||||| ||  ||||| ||||| || ||| ||    
T  6880875 ggcaattcatttatcaaaatgtcatcacatctctttagttctagctcagtgatattagcagccttgggaattgaagccgccaac-tcttggcaatcaata 6880973  T
Q  184 atgaacaatttttgtaaagaaggaaggtgttgaggcagggccattttcaatttgggacattctcttatataaagctctttaagcaaaggaaacccttcaa 283  Q
    ||   ||||||||| |||||||| ||||||||||| |||||  ||||||| |||||||| | | ||||| |||||| || ||||||||| || |||||||    
T  6880974 atctccaatttttgcaaagaagggaggtgttgaggaagggcacttttcaacttgggacaatgttttatacaaagcttttgaagcaaagggaaaccttcaa 6881073  T
Q  284 gacacaaccattcct 298  Q
    |||| ||||||||||    
T  6881074 gacataaccattcct 6881088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 71 - 298
Target Start/End: Original strand, 6140631 - 6140858
Alignment:
Q  71 ttttcaagctggtcggcaattcatttaccaaaactctatcacatctcttaacatctaactctatgatattatcacccttaggaattgatgcttccaacat 170  Q
    |||||||||| |  ||||||||||||| |||||  | |||||||||||| |  ||||  ||  |||||||| || |||| |||||||| || |||||| |    
T  6140631 ttttcaagcttgatggcaattcatttatcaaaatgccatcacatctctttagttctatatcactgatattagcagccttgggaattgaagcctccaac-t 6140729  T
Q  171 ctt-gcactcattaatgaacaatttttgtaaagaaggaaggtgttgaggcagggccattttcaatttgggacattctcttatataaagctctttaagcaa 269  Q
    ||| ||| ||| ||||   ||| ||||| ||| ||||||| || |||||||||||  ||||||| |||||||||| | ||| | ||||||||| ||||||    
T  6140730 cttcgcaatcaataatctccaacttttgcaaacaaggaagatgatgaggcagggcacttttcaacttgggacattgttttagacaaagctcttgaagcaa 6140829  T
Q  270 aggaaacccttcaagacacaaccattcct 298  Q
    ||| || |||||||| || ||||||||||    
T  6140830 agggaaaccttcaaggcataaccattcct 6140858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 71 - 294
Target Start/End: Original strand, 6236070 - 6236293
Alignment:
Q  71 ttttcaagctggtcggcaattcatttaccaaaactctatcacatctcttaacatctaactctatgatattatcacccttaggaattgatgcttccaacat 170  Q
    |||||||| |||  ||||||||||||| |||||  | |||||||||||| |  |||| |||  |||||||| || |||| |||||||| || |||||| |    
T  6236070 ttttcaaggtggatggcaattcatttatcaaaatgccatcacatctctttagttctagctcactgatattaccagccttgggaattgacgcctccaac-t 6236168  T
Q  171 cttg-cactcattaatgaacaatttttgtaaagaaggaaggtgttgaggcagggccattttcaatttgggacattctcttatataaagctctttaagcaa 269  Q
    |||| || ||| ||||   ||||||||| ||| ||||||||| |||||||||| |  ||||||| |||||||| | | ||||| ||||||||||||| ||    
T  6236169 cttggcaatcaataatctccaatttttgcaaacaaggaaggtattgaggcaggtcacttttcaacttgggacaatgttttatacaaagctctttaagaaa 6236268  T
Q  270 aggaaacccttcaagacacaaccat 294  Q
    ||| || ||| || |||| ||||||    
T  6236269 agggaaacctccacgacataaccat 6236293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 71 - 298
Target Start/End: Original strand, 7748347 - 7748574
Alignment:
Q  71 ttttcaagctggtcggcaattcatttaccaaaactctatcacatctcttaacatctaactctatgatattatcacccttaggaattgatgcttccaacat 170  Q
    |||||||||| |  |||||||||||||  ||||  | |||||||||||| |  ||||  ||  ||||||||||| |||| |||||||| || | |||| |    
T  7748347 ttttcaagctagatggcaattcatttattaaaatgccatcacatctctttagttctaggtcactgatattatcagccttgggaattgaagcctgcaac-t 7748445  T
Q  171 cttg-cactcattaatgaacaatttttgtaaagaaggaaggtgttgaggcagggccattttcaatttgggacattctcttatataaagctctttaagcaa 269  Q
    |||| || ||| ||||   ||||||||| |||||||||||||||||||||||||   ||||||| || ||||| | | ||||| ||||||||  ||||||    
T  7748446 cttggcaatcaataatctccaatttttgcaaagaaggaaggtgttgaggcagggaacttttcaacttcggacaatgttttatacaaagctctcgaagcaa 7748545  T
Q  270 aggaaacccttcaagacacaaccattcct 298  Q
    ||| || | ||||||||| ||||||||||    
T  7748546 agggaaacattcaagacataaccattcct 7748574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 67 - 218
Target Start/End: Complemental strand, 6796444 - 6796293
Alignment:
Q  67 aactttttcaagctggtcggcaattcatttaccaaaactctatcacatctcttaacatctaactctatgatattatcacccttaggaattgatgcttcca 166  Q
    |||||||||||||| || ||||||||||||||||||| | || |||| ||||  | || ||||| || |||| |||||||||| ||||||||||||||||    
T  6796444 aactttttcaagcttgttggcaattcatttaccaaaattttaccacaactctgtatatataactgtacgatactatcaccctttggaattgatgcttcca 6796345  T
Q  167 acatcttgcactcattaatgaacaatttttgtaaagaaggaaggtgttgagg 218  Q
    ||   | ||| |||  |||   || ||| |||||||||||||||||||||||    
T  6796344 actcgtagcaatcaccaatcttcattttctgtaaagaaggaaggtgttgagg 6796293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 71 - 456
Target Start/End: Original strand, 6257547 - 6257932
Alignment:
Q  71 ttttcaagctggtcggcaattcatttaccaaaactctatcacatctcttaacatctaactctatgatattatcacccttaggaattgatgcttccaacat 170  Q
    |||||||||| |  ||||||||||||| |||||  | |||||||||||| |  ||||  ||  |||||||| || |||| |||||| | || |||||| |    
T  6257547 ttttcaagcttgatggcaattcatttatcaaaatgccatcacatctctttagttctatatcactgatattagcagcctttggaattaaagcctccaac-t 6257645  T
Q  171 ctt-gcactcattaatgaacaatttttgtaaagaaggaaggtgttgaggcagggccattttcaatttgggacattctcttatataaagctctttaagcaa 269  Q
    ||| ||| ||| ||||   ||| ||||| ||| ||||||| || |||||||||||  ||||||| |||||||||| | ||| | ||||||||| |||||     
T  6257646 cttcgcaatcaataatctccaacttttgcaaacaaggaagatgatgaggcagggcacttttcaacttgggacattgttttagacaaagctcttgaagcag 6257745  T
Q  270 aggaaacccttcaagacacaaccattcctcccaattgttcatcttctcaaatttcaaaacttcaagagacctgaacagatcatttgttgaactactgtcg 369  Q
    ||| || |||||||| || |||||||||| ||| |    ||| | |||||    ||||  |||||| || || ||   | |||||| |||| ||  | ||    
T  6257746 agggaaaccttcaaggcataaccattccttccattcagacatatactcaacccgcaaagtttcaagggatctaaatgcaacatttgatgaattatagccg 6257845  T
Q  370 taaaactcttcacctatgatctttattccatcacagtctgaaatagaaagcatcttgagaaaggggagggtcccaagtggtggcaac 456  Q
     ||||||||  ||| |||||||||||||||| |||| ||||||| |||||| |||||||| | ||||   |||||||||||||||||    
T  6257846 caaaactctgaaccaatgatctttattccatgacagcctgaaatggaaagcttcttgagagaagggaacttcccaagtggtggcaac 6257932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 192 - 300
Target Start/End: Complemental strand, 6521837 - 6521729
Alignment:
Q  192 tttttgtaaagaaggaaggtgttgaggcagggccattttcaatttgggacattctcttatataaagctctttaagcaaaggaaacccttcaagacacaac 291  Q
    ||||||||||||||||||||||||| |||| ||| ||||||||| ||||||      |||| ||| ||||||||||||||||||| || |||| || |||    
T  6521837 tttttgtaaagaaggaaggtgttgatgcagagcccttttcaattcgggacaaaaggatatagaaatctctttaagcaaaggaaactctccaaggcataac 6521738  T
Q  292 cattcctcc 300  Q
     ||||||||    
T  6521737 aattcctcc 6521729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 189 - 277
Target Start/End: Complemental strand, 6781250 - 6781162
Alignment:
Q  189 caatttttgtaaagaaggaaggtgttgaggcagggccattttcaatttgggacattctcttatataaagctctttaagcaaaggaaacc 277  Q
    ||||||||||||||||||||| |||||||||||||    ||||| ||| ||||| | | ||||| |||||||| |||||||||||||||    
T  6781250 caatttttgtaaagaaggaagatgttgaggcagggtgcctttcagtttaggacaatttgttatagaaagctctataagcaaaggaaacc 6781162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 370 - 473
Target Start/End: Original strand, 5262427 - 5262530
Alignment:
Q  370 taaaactcttcacctatgatctttattccatcacagtctgaaatagaaagcatcttgagaaaggggagggtcccaagtggtggcaacaaagaacataatc 469  Q
    |||||||||||||| ||||||| |||||||| ||| |||||||||||||||   || ||| |||| ||  |||||||||||||||||   ||||| ||||    
T  5262427 taaaactcttcaccgatgatctctattccataacattctgaaatagaaagctctttaagagagggaagcttcccaagtggtggcaaccgggaacaaaatc 5262526  T
Q  470 caca 473  Q
    ||||    
T  5262527 caca 5262530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 298
Target Start/End: Complemental strand, 6522512 - 6522406
Alignment:
Q  192 tttttgtaaagaaggaaggtgttgaggcagggccattttcaatttgggacattctcttatataaagctctttaagcaaaggaaacccttcaagacacaac 291  Q
    ||||||||||||||||||||||||| |||| ||| ||||||||| ||||||      |||| ||| ||||||||||||||||||| || |||| || |||    
T  6522512 tttttgtaaagaaggaaggtgttgatgcagagcccttttcaattcgggacaaaaggatatagaaatctctttaagcaaaggaaactctccaaggcataac 6522413  T
Q  292 cattcct 298  Q
     ||||||    
T  6522412 aattcct 6522406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 298
Target Start/End: Complemental strand, 6522782 - 6522676
Alignment:
Q  192 tttttgtaaagaaggaaggtgttgaggcagggccattttcaatttgggacattctcttatataaagctctttaagcaaaggaaacccttcaagacacaac 291  Q
    ||||||||||||||||||||||||| |||| ||| ||||||||| ||||||      |||| ||| ||||||||||||||||||| || |||| || |||    
T  6522782 tttttgtaaagaaggaaggtgttgatgcagagcccttttcaattcgggacaaaaggatatagaaatctctttaagcaaaggaaactctccaaggcataac 6522683  T
Q  292 cattcct 298  Q
     ||||||    
T  6522682 aattcct 6522676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 247 - 300
Target Start/End: Original strand, 6734336 - 6734389
Alignment:
Q  247 cttatataaagctctttaagcaaaggaaacccttcaagacacaaccattcctcc 300  Q
    ||||||||||||||||||||  || |||||||||||||||| ||||||||||||    
T  6734336 cttatataaagctctttaagagaaagaaacccttcaagacataaccattcctcc 6734389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 247 - 300
Target Start/End: Complemental strand, 6781327 - 6781274
Alignment:
Q  247 cttatataaagctctttaagcaaaggaaacccttcaagacacaaccattcctcc 300  Q
    ||||||||||||||||||||  || |||||||||||||||| ||||||||||||    
T  6781327 cttatataaagctctttaagagaaagaaacccttcaagacataaccattcctcc 6781274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 249 - 344
Target Start/End: Complemental strand, 4390423 - 4390328
Alignment:
Q  249 tatataaagctctttaagcaaaggaaacccttcaagacacaaccattcctcccaattgttcatcttctcaaatttcaaaacttcaagagacctgaa 344  Q
    |||| ||||||||||||||||||| || ||||||| ||| |||||||||| |||||||  ||| | |||||||  ||||| ||||||  |||||||    
T  4390423 tatagaaagctctttaagcaaagggaaaccttcaacacataaccattccttccaattggacatgtcctcaaatcgcaaaatttcaaggaacctgaa 4390328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 189 - 284
Target Start/End: Complemental strand, 6850844 - 6850749
Alignment:
Q  189 caatttttgtaaagaaggaaggtgttgaggcagggccattttcaatttgggacattctcttatataaagctctttaagcaaaggaaacccttcaag 284  Q
    |||||||||  ||||||| |||||||||||||||||  ||||||| || ||||| | | ||||| ||||||||| ||| ||||| || ||||||||    
T  6850844 caatttttgctaagaagggaggtgttgaggcagggcacttttcaacttcggacaatgttttatacaaagctcttgaagtaaagggaaaccttcaag 6850749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 487 - 602
Target Start/End: Original strand, 6898849 - 6898964
Alignment:
Q  487 agagatactaagtttggtaaatgataaccccttatccaatttggaaatctattacctttgtattttgagatggtaagcctcttcaagtttctatttggtt 586  Q
    ||||||||||| || |||||||||| | |||  | |||||||||||||||| | ||| |||| | |  |||||| |||||| | | |||| |||||||||    
T  6898849 agagatactaaattgggtaaatgatgaaccccaagccaatttggaaatctactgcctctgtagtctttgatggttagcctcatgaggtttatatttggtt 6898948  T
Q  587 gaagagcctccaagac 602  Q
    |||||||||| |||||    
T  6898949 gaagagcctctaagac 6898964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 420
Target Start/End: Original strand, 5279303 - 5279353
Alignment:
Q  370 taaaactcttcacctatgatctttattccatcacagtctgaaatagaaagc 420  Q
    |||||||||||||| || |||| |||||||||||| |||||||||||||||    
T  5279303 taaaactcttcaccgataatctctattccatcacattctgaaatagaaagc 5279353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 231 - 360
Target Start/End: Original strand, 5248682 - 5248811
Alignment:
Q  231 caatttgggacattctcttatataaagctctttaagcaaaggaaacccttcaagacacaaccattcctcccaattgttcatcttctcaaatttcaaaact 330  Q
    |||||||||||| | ||||||| |||||| |||||||||||| || |  |||| ||| ||||||| || |||||||  ||| |||||||| | ||||| |    
T  5248682 caatttgggacaatttcttatagaaagctgtttaagcaaagggaaacactcaacacataaccatttcttccaattggacatgttctcaaaatacaaaaat 5248781  T
Q  331 tcaagagacctgaacagatcatttgttgaa 360  Q
    || ||| || ||||  ||||||||| ||||    
T  5248782 tcgagaaacttgaatggatcatttgatgaa 5248811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 178 - 303
Target Start/End: Original strand, 5266531 - 5266656
Alignment:
Q  178 tcattaatgaacaatttttgtaaagaaggaaggtgttgaggcagggccattttcaatttgggacattctcttatataaagctctttaagcaaaggaaacc 277  Q
    |||||||| | ||||||||| |||||||||||||||||||| ||     ||||||||||| ||||   |  |||| ||||||||| ||||||||| || |    
T  5266531 tcattaatcaccaatttttgcaaagaaggaaggtgttgaggtagatattttttcaatttgtgacaactttctataaaaagctcttcaagcaaagggaaac 5266630  T
Q  278 cttcaagacacaaccattcctcccaa 303  Q
     ||||| ||| |||||||||| ||||    
T  5266631 tttcaacacataaccattccttccaa 5266656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 486 - 602
Target Start/End: Original strand, 6141046 - 6141162
Alignment:
Q  486 aagagatactaagtttggtaaatgataaccccttatccaatttggaaatctattacctttgtattttgagatggtaagcctcttcaagtttctatttggt 585  Q
    |||||||||||| || |||| ||||| | |||  | |||||| ||||| ||| ||||| |||| |    |||||| |||||| | | |||||||||||||    
T  6141046 aagagatactaaattgggtagatgatgatccccaagccaattaggaaagctactacctctgtagtcattgatggtgagcctcatgaggtttctatttggt 6141145  T
Q  586 tgaagagcctccaagac 602  Q
    |||||||||||||||||    
T  6141146 tgaagagcctccaagac 6141162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 486 - 602
Target Start/End: Original strand, 6167651 - 6167767
Alignment:
Q  486 aagagatactaagtttggtaaatgataaccccttatccaatttggaaatctattacctttgtattttgagatggtaagcctcttcaagtttctatttggt 585  Q
    |||||||||||| || |||| ||||| | |||  | |||||||||||| ||| ||||| |||| |    |||||| |||||| | |  ||||||||||||    
T  6167651 aagagatactaaattgggtagatgatgatccccaagccaatttggaaagctactacctctgtagtcattgatggtgagcctcatgagatttctatttggt 6167750  T
Q  586 tgaagagcctccaagac 602  Q
    |||||||||||||||||    
T  6167751 tgaagagcctccaagac 6167767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 189 - 293
Target Start/End: Original strand, 6243780 - 6243884
Alignment:
Q  189 caatttttgtaaagaaggaaggtgttgaggcagggccattttcaatttgggacattctcttatataaagctctttaagcaaaggaaacccttcaagacac 288  Q
    ||||||||| ||  ||||||| |||||||||||   | ||||||| |||||||| | ||||||  |||||||||| |||||||| || ||||||| |||     
T  6243780 caatttttgcaagcaaggaagatgttgaggcagtttccttttcaacttgggacagtatcttattgaaagctctttcagcaaagggaaaccttcaatacat 6243879  T
Q  289 aacca 293  Q
    |||||    
T  6243880 aacca 6243884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 368 - 436
Target Start/End: Complemental strand, 6850666 - 6850598
Alignment:
Q  368 cgtaaaactcttcacctatgatctttattccatcacagtctgaaatagaaagcatcttgagaaagggga 436  Q
    |||||||||||  ||| ||||||| ||||||||||||| ||||||| |||||  |||||||| ||||||    
T  6850666 cgtaaaactctggaccaatgatctctattccatcacagcctgaaatggaaagattcttgagagagggga 6850598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 71 - 298
Target Start/End: Complemental strand, 13272237 - 13272010
Alignment:
Q  71 ttttcaagctggtcggcaattcatttaccaaaactctatcacatctcttaacatctaactctatgatattatcacccttaggaattgatgcttccaacat 170  Q
    |||||||||| |  |||||||||||||  ||||  | |||||||||||| |  ||||  ||  |||||||| || | ||||||||||| || |||||| |    
T  13272237 ttttcaagcttgatggcaattcatttataaaaatgccatcacatctctttagttctatatcactgatattagcagcattaggaattgaagcctccaac-t 13272139  T
Q  171 cttg-cactcattaatgaacaatttttgtaaagaaggaaggtgttgaggcagggccattttcaatttgggacattctcttatataaagctctttaagcaa 269  Q
    |||| || ||| ||||   ||| ||||| ||| |||||| ||| |||||||| ||  | ||||| |||||||| |   ||||| ||||||||| ||||||    
T  13272138 cttggcaatcaataatctccaacttttgcaaacaaggaacgtgctgaggcagagcactcttcaacttgggacaatgcgttatacaaagctcttgaagcaa 13272039  T
Q  270 aggaaacccttcaagacacaaccattcct 298  Q
     || || ||||||||||| ||||||||||    
T  13272038 tgggaaaccttcaagacataaccattcct 13272010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 298
Target Start/End: Original strand, 6264145 - 6264254
Alignment:
Q  189 caatttttgtaaagaaggaaggtgttgaggcagggccattttcaatttgggacattctcttatataaagctctttaagcaaaggaaacccttcaagacac 288  Q
    ||||||| | |||||||| ||||| | ||||||||   |||||||||||||||| |   ||| | ||||||||||||  ||||| || || ||||||||     
T  6264145 caattttagcaaagaagggaggtgataaggcagggtacttttcaatttgggacaatgatttagagaaagctctttaactaaagggaaaccatcaagacat 6264244  T
Q  289 aaccattcct 298  Q
    ||||||||||    
T  6264245 aaccattcct 6264254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 486 - 602
Target Start/End: Original strand, 6257962 - 6258078
Alignment:
Q  486 aagagatactaagtttggtaaatgataaccccttatccaatttggaaatctattacctttgtattttgagatggtaagcctcttcaagtttctatttggt 585  Q
    |||||||||||| ||||||| || |  | |||  | |||||||||||| ||| ||||| |||| |    |||||| |||||| | | ||||||||| |||    
T  6257962 aagagatactaaatttggtagattaagatccccaagccaatttggaaagctactacctctgtagtcattgatggtgagcctcatgaggtttctattaggt 6258061  T
Q  586 tgaagagcctccaagac 602  Q
    |||||||||||||||||    
T  6258062 tgaagagcctccaagac 6258078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1643 (Bit Score: 171; Significance: 2e-91; HSPs: 1)
Name: scaffold1643
Description:

Target: scaffold1643; HSP #1
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 33 - 602
Target Start/End: Original strand, 474 - 1046
Alignment:
Q  33 ggagaactccgtgtaccggttttcatgaatgactaactttttcaagctggtcggcaattcatttaccaaaactctatcacatctcttaacatctaactct 132  Q
    ||||||||| |||||| | || |||  || || |||| ||||||||||||||| ||||||||||||||||| ||||||||||||| | | ||||||||||    
T  474 ggagaactcggtgtactgattatcacaaaggaataaccttttcaagctggtcgacaattcatttaccaaaattctatcacatctccttatatctaactct 573  T
Q  133 atgatattatcacccttaggaattgatgcttccaacatcttgcactcattaatgaacaatttttgtaaagaaggaaggtgttgaggcag---ggccattt 229  Q
    || |||||||||| ||| ||||||||||| |||| | | ||||| ||| ||||   || |||||||||| |||||||||||||||||||   |||| |||    
T  574 atcatattatcactcttgggaattgatgcctccatcttgttgcaatcagtaatattcagtttttgtaaaaaaggaaggtgttgaggcagagtggcccttt 673  T
Q  230 tcaatttgggacattctcttatataaagctctttaagcaaaggaaacccttcaagacacaaccattcctcccaattgttcatcttctcaaatttcaaaac 329  Q
      ||||||||||| | |||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  674 ctaatttgggacactttcttatagtaagctctttaagcaaaggaaacccttcaggacacaaccattcctcccaattgttcaacttctcaaatttcaaaac 773  T
Q  330 ttcaagagacctgaacagatcatttgttgaactactgtcgtaaaactcttcacctatgatctttattccatcacagtctgaaatagaaagcatcttgaga 429  Q
    |||||| |||  |||| || |||  ||| || | ||| | | || ||||||||| |||||||||||||||||||| | ||||||||||||  ||||||||    
T  774 ttcaagggacaagaacggaacatgcgttaaattgctgccatgaatctcttcaccaatgatctttattccatcacaatatgaaatagaaagattcttgaga 873  T
Q  430 aaggggagggtcccaagtggtggcaacaaagaacataatccacaaaactgtagattaagagatactaagtttggtaaatgataaccccttatccaatttg 529  Q
     | || ||   |||||||||||| ||    ||||||||||||||       || | ||||||||||||||| ||||||||| ||||  ||||||||||||    
T  874 gaaggaagctgcccaagtggtggaaaatgggaacataatccacagcttaacagttgaagagatactaagttgggtaaatgacaacctgttatccaatttg 973  T
Q  530 gaaatctattacctttgtattttgagatggtaagcctcttcaagtttctatttggttgaagagcctccaagac 602  Q
    ||||  |  | || |||||   |   || || ||||||||||||||  |||||||||||||||| ||||||||    
T  974 gaaagttgctgccattgtagccttcaatagtgagcctcttcaagttgttatttggttgaagagcatccaagac 1046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425 (Bit Score: 118; Significance: 7e-60; HSPs: 3)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 71 - 300
Target Start/End: Complemental strand, 9453 - 9224
Alignment:
Q  71 ttttcaagctggtcggcaattcatttaccaaaactctatcacatctcttaacatctaactctatgatattatcacccttaggaattgatgcttccaacat 170  Q
    ||||||||||||||||||||||||||||||||| ||||||||| || |  | |||||||||||| |||||||||| ||| |||||||||||||||||| |    
T  9453 ttttcaagctggtcggcaattcatttaccaaaattctatcacaactttgtatatctaactctatcatattatcacacttgggaattgatgcttccaactt 9354  T
Q  171 cttgcactcattaatgaacaatttttgtaaagaaggaaggtgttgaggcagggccattttcaatttgggacattctcttatataaagctctttaagcaaa 270  Q
     ||||| |||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||| |||||| |    |||| ||| ||| |||||||||    
T  9353 gttgcaatcattaatgaacaatttttgtaaagaaggaaggtgttgtggcagagcccttttcaattcgggacaattggatatagaaaactcgttaagcaaa 9254  T
Q  271 ggaaacccttcaagacacaaccattcctcc 300  Q
    |||||| || |||| || ||||||||||||    
T  9253 ggaaactctccaaggcataaccattcctcc 9224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 189 - 624
Target Start/End: Complemental strand, 9065 - 8633
Alignment:
Q  189 caatttttgtaaagaaggaaggtgttgaggcagggccattttcaatttgggacattctcttatataaagctctttaagcaaaggaaacccttcaagacac 288  Q
    ||||||||||||||||||||| |||||||||||||   |||||||||| ||||| | |  |||||||||||||||||||| |||||||| | ||   ||     
T  9065 caatttttgtaaagaaggaagatgttgaggcagggtgcttttcaatttaggacaattttctatataaagctctttaagcagaggaaaccttaca---cat 8969  T
Q  289 aaccattcctcccaattgttcatcttctcaaatttcaaaacttcaagagacctgaacagatcatttgttgaactactgtcgtaaaactcttcacctatga 388  Q
    | |||||||||||| |||  ||| | | ||||| |||||  |||||| ||| ||||  || || |||||||| || || | ||||| |||||| | ||||    
T  8968 atccattcctcccagttgaccatatccacaaatctcaaatattcaagggacttgaatggaacaattgttgaattattgccataaaattcttcatcaatga 8869  T
Q  389 tctttattccatcacagtctgaaatagaaagcatcttgagaaaggggagggtcccaagtggtggcaacaaagaacataatccacaaaactgtagattaag 488  Q
    |||||||||| ||||||||  |||| |||||  |||||||| | |||||    ||||||| ||||||  | |||||||| ||||||  ||  || | |||    
T  8868 tctttattccttcacagtcataaatggaaagtttcttgagagaagggagttgtccaagtgctggcaaacaggaacataacccacaacccttcagttgaag 8769  T
Q  489 agatactaagtttggtaaatgataaccccttatccaatttggaaatctattacctttgtattttgagatggtaagcctcttcaagtttctatttggttga 588  Q
    |||||||||||| |||||||||  |||||||| |||||||||||| ||| ||||||||||   || |||| | ||| |||||||||| |||||||||||     
T  8768 agatactaagttcggtaaatgactaccccttagccaatttggaaagctactacctttgtagcatgtgatgttgagcttcttcaagttgctatttggttgt 8669  T
Q  589 agagcctccaagactgacacagtgctttcagccatt 624  Q
    | ||||||||||||| ||||| | |||||| |||||    
T  8668 aaagcctccaagactaacacacttctttcatccatt 8633  T

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Target: scaffold0425; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 197 - 300
Target Start/End: Complemental strand, 9192 - 9089
Alignment:
Q  197 gtaaagaaggaaggtgttgaggcagggccattttcaatttgggacattctcttatataaagctctttaagcaaaggaaacccttcaagacacaaccattc 296  Q
    ||||||||||||| ||||||||||   || |||| ||||| | ||| |  | |||| |||||||||||||  || |||||||||||||||| ||||||||    
T  9192 gtaaagaaggaagatgttgaggcaatacccttttgaatttagaacaataccatatagaaagctctttaagagaaagaaacccttcaagacataaccattc 9093  T
Q  297 ctcc 300  Q
    ||||    
T  9092 ctcc 9089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 3e-40; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 194 - 602
Target Start/End: Complemental strand, 6574890 - 6574482
Alignment:
Q  194 tttgtaaagaaggaaggtgttgaggcagggccattttcaatttgggacattctcttatataaagctctttaagcaaaggaaacccttcaagacacaacca 293  Q
    |||| |||||| |||||| ||||||||||  | |||||||||||||||| |    ||||||||||||||| ||||| ||||||| ||||||  | |||||    
T  6574890 tttgcaaagaaagaaggttttgaggcaggaaccttttcaatttgggacaatggtctatataaagctctttgagcaagggaaaccgttcaagttaaaacca 6574791  T
Q  294 ttcctcccaattgttcatcttctcaaatttcaaaacttcaagagacctgaacagatcatttgttgaactactgtcgtaaaactcttcacctatgatcttt 393  Q
    ||||| ||| | |  ||| ||| |||||| ||||| |||||| ||||||||| || |   |||||||| |  | |||| ||||||||||| |||||||||    
T  6574790 ttccttccattcgggcatattcccaaattccaaaaattcaagggacctgaacggaactaatgttgaacaatcgccgtagaactcttcaccgatgatcttt 6574691  T
Q  394 attccatcacagtctgaaatagaaagcatcttgagaaaggggagggtcccaagtggtggcaacaaagaacataatccacaaaactgtagattaagagata 493  Q
    ||||||| |||  |||||||  |||||  ||||||| | |||||    |||||||| || ||||  ||||| |||||||||  ||| ||  |||||||||    
T  6574690 attccattacaacctgaaatgaaaagctccttgagacatgggagctgtccaagtggcggaaacagggaacaaaatccacaattctgcaggataagagata 6574591  T
Q  494 ctaagtttggtaaatgataaccccttatccaatttggaaatctattacctttgtattttgagatggtaagcctcttcaagtttctatttggttgaagagc 593  Q
    ||||||| ||||||||| ||| ||||| |||||||||||| ||  | || ||||| | |  |||||| |||||||  | ||| ||||||||| |||||||    
T  6574590 ctaagttaggtaaatgagaacaccttagccaatttggaaagctgctgccattgtagtatttgatggtgagcctctgtaggttgctatttggtcgaagagc 6574491  T
Q  594 ctccaagac 602  Q
    ||| |||||    
T  6574490 ctcaaagac 6574482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 114
Target Start/End: Complemental strand, 6575059 - 6574970
Alignment:
Q  25 tgctccacggagaactccgtgtaccggttttcatgaatgactaactttttcaagctggtcggcaattcatttaccaaaactctatcacat 114  Q
    |||||||| ||||||||  ||||||| |||| ||||| ||  ||| ||| ||||||||  |||||||||||||| |||| ||||| ||||    
T  6575059 tgctccacagagaactcaatgtaccgatttttatgaaggataaacctttccaagctggatggcaattcatttacaaaaattctataacat 6574970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0958 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0958
Description:

Target: scaffold0958; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 71 - 429
Target Start/End: Complemental strand, 1479 - 1121
Alignment:
Q  71 ttttcaagctggtcggcaattcatttaccaaaactctatcacatctcttaacatctaactctatgatattatcacccttaggaattgatgcttccaacat 170  Q
    |||||||| |||  || ||||||||||||||||  ||||||||||  || |  |||| |||| ||||||||||| |||||||||||||  | |||||| |    
T  1479 ttttcaagttggaaggaaattcatttaccaaaatgctatcacatccgtttag-tctagctctctgatattatcagccttaggaattgaaacctccaactt 1381  T
Q  171 cttgcactcattaatgaacaatttttgtaaagaaggaaggtgttgaggcagggccattttcaatttgggacattctcttatataaagctctttaagcaaa 270  Q
       ||||||  ||||   |||| |||||||||||||||||||| |||| |||||| |||||||| || |||| | ||||||| |||| | ||||||||||    
T  1380 gcagcactcgctaatatccaatatttgtaaagaaggaaggtgtcgaggtagggcccttttcaatatgcgacaatatcttatagaaagatttttaagcaaa 1281  T
Q  271 ggaaacccttcaagacacaaccattcctcccaattgttcatcttctcaaatttcaaaacttcaagag-acctgaacagatcatttgttgaactactgtcg 369  Q
    |||||||||||||||||  ||||||| |||||      ||||  |||||||| |||||||||||||| |||||||| ||  | |||||||| || |  |     
T  1280 ggaaacccttcaagacaataccattcttcccagcaaagcatccactcaaattccaaaacttcaagagaacctgaacggaataattgttgaattatttcca 1181  T
Q  370 taaaactcttcacctatgatctttattccatcacagtctgaaatagaaagcatcttgaga 429  Q
    ||||||||||  || ||||| | |||||||| ||| | ||||||| |||||  |||||||    
T  1180 taaaactctttgccaatgatttctattccataacaatatgaaatataaagctccttgaga 1121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 612 - 644
Target Start/End: Complemental strand, 2623921 - 2623889
Alignment:
Q  612 gctttcagccattgactcatccatttcttctct 644  Q
    |||||||||||||||||||| ||||||||||||    
T  2623921 gctttcagccattgactcattcatttcttctct 2623889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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