View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8580_low_48 (Length: 248)

Name: NF8580_low_48
Description: NF8580
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8580_low_48
NF8580_low_48
[»] chr8 (41 HSPs)
chr8 (123-235)||(31038353-31038465)
chr8 (37-88)||(18567412-18567462)
chr8 (37-88)||(8284564-8284614)
chr8 (40-87)||(10129238-10129284)
chr8 (40-87)||(27874678-27874724)
chr8 (40-87)||(28014855-28014901)
chr8 (37-83)||(13327942-13327987)
chr8 (34-84)||(22838354-22838403)
chr8 (40-88)||(1203736-1203783)
chr8 (40-84)||(13496709-13496752)
chr8 (40-84)||(38212944-38212987)
chr8 (40-87)||(3306052-3306098)
chr8 (40-87)||(6818152-6818198)
chr8 (40-87)||(7140456-7140502)
chr8 (40-87)||(9801803-9801849)
chr8 (40-87)||(14961660-14961706)
chr8 (40-87)||(26682203-26682249)
chr8 (40-87)||(31812248-31812294)
chr8 (40-86)||(2161522-2161567)
chr8 (40-86)||(5573421-5573466)
chr8 (40-86)||(39024855-39024900)
chr8 (42-84)||(40225987-40226028)
chr8 (40-85)||(12189587-12189631)
chr8 (40-85)||(12434015-12434059)
chr8 (40-89)||(35678270-35678318)
chr8 (40-85)||(39701802-39701846)
chr8 (40-88)||(45006104-45006151)
chr8 (40-87)||(9580106-9580152)
chr8 (40-87)||(26363987-26364033)
chr8 (40-71)||(36967082-36967113)
chr8 (40-87)||(38843839-38843885)
chr8 (40-90)||(7978013-7978062)
chr8 (40-86)||(14816124-14816169)
chr8 (40-86)||(14829571-14829616)
chr8 (40-89)||(16445731-16445779)
chr8 (40-89)||(19343831-19343879)
chr8 (39-84)||(31263033-31263077)
chr8 (40-68)||(297230-297258)
chr8 (50-86)||(15198898-15198933)
chr8 (37-69)||(40210835-40210867)
chr8 (47-87)||(43717549-43717588)
[»] chr7 (35 HSPs)
chr7 (37-87)||(9332093-9332142)
chr7 (40-89)||(4969908-4969956)
chr7 (34-86)||(820539-820590)
chr7 (40-86)||(3561876-3561921)
chr7 (36-82)||(18102232-18102277)
chr7 (40-86)||(39757108-39757153)
chr7 (40-92)||(19889475-19889526)
chr7 (40-88)||(24462951-24462998)
chr7 (40-84)||(25709399-25709442)
chr7 (37-85)||(36548459-36548506)
chr7 (40-87)||(7040249-7040295)
chr7 (40-87)||(7170137-7170183)
chr7 (40-87)||(32117949-32117995)
chr7 (40-87)||(46290145-46290191)
chr7 (40-86)||(33343123-33343168)
chr7 (40-86)||(34270396-34270441)
chr7 (40-84)||(384431-384473)
chr7 (40-85)||(8091311-8091355)
chr7 (39-84)||(8595031-8595075)
chr7 (40-89)||(12650955-12651004)
chr7 (39-87)||(12085928-12085975)
chr7 (40-84)||(29398134-29398177)
chr7 (40-84)||(29692540-29692583)
chr7 (40-84)||(45501594-45501637)
chr7 (40-83)||(5833490-5833532)
chr7 (40-83)||(26050462-26050504)
chr7 (40-83)||(26059821-26059863)
chr7 (40-86)||(5909280-5909325)
chr7 (40-86)||(23982753-23982798)
chr7 (40-82)||(26037228-26037269)
chr7 (40-86)||(33072116-33072161)
chr7 (40-86)||(47457459-47457504)
chr7 (44-85)||(22041725-22041765)
chr7 (40-89)||(42750418-42750466)
chr7 (40-84)||(22334021-22334064)
[»] chr1 (32 HSPs)
chr1 (40-89)||(6180321-6180369)
chr1 (40-87)||(30172014-30172060)
chr1 (40-87)||(30187555-30187601)
chr1 (40-87)||(35512860-35512906)
chr1 (40-86)||(313884-313929)
chr1 (40-86)||(6569983-6570028)
chr1 (40-86)||(34802102-34802147)
chr1 (40-89)||(5875210-5875258)
chr1 (44-88)||(25465297-25465340)
chr1 (40-88)||(39310782-39310829)
chr1 (40-87)||(6307637-6307683)
chr1 (40-87)||(23576411-23576457)
chr1 (40-87)||(39150324-39150370)
chr1 (40-87)||(51382449-51382495)
chr1 (40-86)||(1502718-1502763)
chr1 (40-86)||(6754606-6754651)
chr1 (40-86)||(36490914-36490959)
chr1 (44-86)||(38812879-38812920)
chr1 (40-85)||(13322011-13322055)
chr1 (40-85)||(30288863-30288907)
chr1 (40-88)||(41624964-41625011)
chr1 (40-87)||(3168065-3168111)
chr1 (40-87)||(17919588-17919634)
chr1 (40-87)||(22167470-22167516)
chr1 (40-83)||(35438850-35438892)
chr1 (40-87)||(44918159-44918205)
chr1 (43-85)||(5879102-5879143)
chr1 (40-85)||(10896488-10896532)
chr1 (47-84)||(23591840-23591876)
chr1 (40-72)||(8062339-8062371)
chr1 (47-83)||(41676561-41676596)
chr1 (40-84)||(51920431-51920474)
[»] chr4 (34 HSPs)
chr4 (40-88)||(27362526-27362573)
chr4 (37-85)||(29190815-29190862)
chr4 (40-87)||(18882264-18882310)
chr4 (40-87)||(54495634-54495680)
chr4 (40-86)||(35999945-35999990)
chr4 (40-89)||(3085805-3085853)
chr4 (37-86)||(49228786-49228834)
chr4 (40-84)||(47326892-47326935)
chr4 (40-84)||(47341688-47341731)
chr4 (40-83)||(16667385-16667427)
chr4 (40-87)||(19468329-19468375)
chr4 (37-84)||(53961454-53961500)
chr4 (42-84)||(4779436-4779477)
chr4 (40-86)||(17409959-17410004)
chr4 (40-86)||(19450898-19450943)
chr4 (40-81)||(24684972-24685012)
chr4 (40-84)||(23545611-23545654)
chr4 (40-87)||(23051379-23051425)
chr4 (40-83)||(23553705-23553747)
chr4 (40-87)||(27019395-27019441)
chr4 (40-87)||(39876965-39877011)
chr4 (40-87)||(40049693-40049739)
chr4 (40-87)||(50352437-50352483)
chr4 (40-83)||(52391433-52391475)
chr4 (40-87)||(53376405-53376451)
chr4 (40-86)||(4329729-4329774)
chr4 (40-86)||(9759140-9759185)
chr4 (40-90)||(23438290-23438339)
chr4 (40-86)||(33632201-33632246)
chr4 (40-86)||(34941413-34941458)
chr4 (41-87)||(42479889-42479934)
chr4 (44-86)||(49181211-49181252)
chr4 (44-85)||(13214415-13214455)
chr4 (40-84)||(46803934-46803977)
[»] chr2 (34 HSPs)
chr2 (40-88)||(6109524-6109571)
chr2 (40-87)||(8065258-8065304)
chr2 (40-87)||(16126556-16126602)
chr2 (40-87)||(12016801-12016847)
chr2 (40-87)||(24729574-24729620)
chr2 (40-87)||(27665041-27665087)
chr2 (40-87)||(38248417-38248463)
chr2 (44-87)||(43388478-43388520)
chr2 (42-84)||(5853463-5853504)
chr2 (40-86)||(9747452-9747497)
chr2 (37-83)||(16123410-16123455)
chr2 (42-84)||(16493532-16493573)
chr2 (40-82)||(19228560-19228601)
chr2 (40-82)||(26003348-26003389)
chr2 (40-89)||(15411617-15411665)
chr2 (40-88)||(7757782-7757829)
chr2 (44-84)||(11660894-11660933)
chr2 (40-84)||(15231966-15232009)
chr2 (40-84)||(20566017-20566060)
chr2 (44-88)||(25295849-25295892)
chr2 (47-87)||(29157826-29157865)
chr2 (40-87)||(4821411-4821457)
chr2 (40-87)||(5583555-5583601)
chr2 (40-71)||(8770898-8770929)
chr2 (40-87)||(9450392-9450438)
chr2 (41-88)||(34817881-34817927)
chr2 (42-84)||(22704674-22704715)
chr2 (41-87)||(29142210-29142255)
chr2 (43-72)||(15749211-15749240)
chr2 (40-68)||(13351226-13351254)
chr2 (40-88)||(17265539-17265586)
chr2 (40-84)||(23932700-23932743)
chr2 (40-88)||(35729252-35729299)
chr2 (44-84)||(45062337-45062376)
[»] scaffold0111 (1 HSPs)
scaffold0111 (40-87)||(37111-37157)
[»] chr5 (17 HSPs)
chr5 (40-87)||(3398355-3398401)
chr5 (40-87)||(4047547-4047593)
chr5 (40-86)||(2795658-2795703)
chr5 (40-89)||(11636866-11636914)
chr5 (40-88)||(8103576-8103623)
chr5 (36-84)||(12641993-12642040)
chr5 (40-83)||(28630013-28630056)
chr5 (40-87)||(30839916-30839962)
chr5 (37-84)||(31365950-31365996)
chr5 (40-87)||(36597714-36597760)
chr5 (40-82)||(30893764-30893805)
chr5 (40-88)||(6863691-6863738)
chr5 (40-84)||(32019984-32020027)
chr5 (40-71)||(41350337-41350368)
chr5 (40-84)||(23995416-23995459)
chr5 (43-83)||(29855898-29855937)
chr5 (40-84)||(40980508-40980551)
[»] chr3 (29 HSPs)
chr3 (40-87)||(23523081-23523127)
chr3 (40-87)||(38389582-38389628)
chr3 (40-87)||(50204538-50204584)
chr3 (40-86)||(3863464-3863509)
chr3 (43-88)||(51618185-51618229)
chr3 (40-84)||(40930186-40930229)
chr3 (40-87)||(2571403-2571449)
chr3 (40-83)||(8165781-8165823)
chr3 (40-87)||(10307901-10307947)
chr3 (40-87)||(11611111-11611157)
chr3 (40-87)||(16875022-16875068)
chr3 (36-95)||(32553497-32553555)
chr3 (40-86)||(29686455-29686500)
chr3 (42-84)||(33474473-33474514)
chr3 (34-88)||(42180181-42180234)
chr3 (40-90)||(51401575-51401624)
chr3 (40-84)||(20938192-20938235)
chr3 (40-83)||(40497182-40497224)
chr3 (40-87)||(45983641-45983687)
chr3 (41-83)||(31318777-31318818)
chr3 (40-69)||(23803060-23803089)
chr3 (40-85)||(36426408-36426452)
chr3 (40-84)||(36812393-36812435)
chr3 (40-89)||(41151768-41151816)
chr3 (40-80)||(11611049-11611088)
chr3 (40-84)||(13495429-13495472)
chr3 (44-88)||(25633137-25633180)
chr3 (44-84)||(35414809-35414848)
chr3 (40-88)||(37055362-37055409)
[»] scaffold0061 (1 HSPs)
scaffold0061 (40-86)||(52777-52822)
[»] scaffold0017 (1 HSPs)
scaffold0017 (40-86)||(145812-145857)
[»] chr6 (29 HSPs)
chr6 (40-86)||(34692489-34692534)
chr6 (40-85)||(29863301-29863345)
chr6 (40-84)||(10887164-10887207)
chr6 (40-88)||(28943765-28943812)
chr6 (40-87)||(13391810-13391856)
chr6 (40-87)||(17552584-17552630)
chr6 (33-84)||(24979149-24979199)
chr6 (40-86)||(2830679-2830724)
chr6 (40-86)||(3853078-3853123)
chr6 (40-86)||(14228124-14228169)
chr6 (40-86)||(18332686-18332731)
chr6 (37-83)||(31069583-31069628)
chr6 (40-90)||(32614938-32614987)
chr6 (40-89)||(3261213-3261261)
chr6 (40-85)||(31568244-31568288)
chr6 (40-88)||(6016991-6017038)
chr6 (40-80)||(20979107-20979146)
chr6 (40-84)||(27819627-27819670)
chr6 (40-86)||(17596476-17596521)
chr6 (42-87)||(8467790-8467834)
chr6 (40-85)||(29065424-29065468)
chr6 (40-85)||(29120277-29120321)
chr6 (43-84)||(30591163-30591203)
chr6 (40-89)||(33017859-33017907)
chr6 (40-84)||(4371974-4372017)
chr6 (49-85)||(28470001-28470036)
chr6 (40-84)||(29074438-29074481)
chr6 (40-84)||(29079202-29079245)
chr6 (40-84)||(29107011-29107054)
[»] scaffold0011 (1 HSPs)
scaffold0011 (40-85)||(13220-13264)
[»] scaffold0073 (1 HSPs)
scaffold0073 (40-87)||(16532-16578)
[»] scaffold0192 (1 HSPs)
scaffold0192 (37-71)||(13575-13609)
[»] scaffold0727 (1 HSPs)
scaffold0727 (40-83)||(5826-5868)
[»] scaffold0136 (1 HSPs)
scaffold0136 (40-71)||(1455-1486)
[»] scaffold0018 (1 HSPs)
scaffold0018 (40-87)||(182177-182223)
[»] scaffold0155 (1 HSPs)
scaffold0155 (40-86)||(3411-3456)
[»] scaffold0128 (1 HSPs)
scaffold0128 (40-85)||(44293-44337)
[»] scaffold0036 (1 HSPs)
scaffold0036 (43-84)||(94018-94058)


Alignment Details
Target: chr8 (Bit Score: 109; Significance: 6e-55; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 123 - 235
Target Start/End: Complemental strand, 31038465 - 31038353
Alignment:
Q  123 tttaacttaattagaaacgtttcagacatatacattgataattagtacaaatttctaccaaaggagaagtacacaaatcataacaatcttcatcgtcaat 222  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  31038465 tttaacttaattagaaacgtttcagacatatacattgataattagtacaaatttctaccaaaggagaagtacacaaatcataacaatcttcatcttcaat 31038366  T
Q  223 acagtacacaggt 235  Q
    |||||||||||||    
T  31038365 acagtacacaggt 31038353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 37 - 88
Target Start/End: Complemental strand, 18567462 - 18567412
Alignment:
Q  37 taatttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaacccta 88  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  18567462 taatttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaacccta 18567412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 37 - 88
Target Start/End: Complemental strand, 8284614 - 8284564
Alignment:
Q  37 taatttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaacccta 88  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  8284614 taatttaaacttcttaacatgtacaaatttgcac-atgatagaaaaacccta 8284564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 10129238 - 10129284
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  10129238 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaaccct 10129284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 27874724 - 27874678
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  27874724 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaaccct 27874678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 28014901 - 28014855
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28014901 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaaccct 28014855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 83
Target Start/End: Complemental strand, 13327987 - 13327942
Alignment:
Q  37 taatttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaa 83  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  13327987 taatttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaa 13327942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 22838354 - 22838403
Alignment:
Q  34 ttttaatttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  22838354 ttttattttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaac 22838403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 1203736 - 1203783
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaacccta 88  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  1203736 tttaaacttcttatcatgtgcaaatttgcac-atgatagaaaaacccta 1203783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 13496752 - 13496709
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  13496752 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaac 13496709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 38212987 - 38212944
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  38212987 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaac 38212944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 3306098 - 3306052
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||    
T  3306098 tttaaatttcttaacatgtgcaaatttgcac-atgatagaaaaaccct 3306052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 6818152 - 6818198
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  6818152 tttaaacttcttaacatgtacaaatttgcac-atgatagaaaaaccct 6818198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 7140502 - 7140456
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||    
T  7140502 tttaaacttcttaatatgtgcaaatttgcac-atgatagaaaaaccct 7140456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 9801803 - 9801849
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  9801803 tttaaacttcttaacatgtgcaaatttgcac-atgattgaaaaaccct 9801849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 14961706 - 14961660
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  14961706 tttaaacttcttagcatgtgcaaatttgcac-atgatagaaaaaccct 14961660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 26682203 - 26682249
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||    
T  26682203 tttaaatttcttaacatgtgcaaatttgcac-atgatagaaaaaccct 26682249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 31812248 - 31812294
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||    
T  31812248 tttaaacttcttaatatgtgcaaatttgcac-atgatagaaaaaccct 31812294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 2161522 - 2161567
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccc 86  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||    
T  2161522 tttaaatttcttaacatgtgcaaatttgcac-atgatagaaaaaccc 2161567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 5573421 - 5573466
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccc 86  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||    
T  5573421 tttaaacttcttaacatgtacaaatttgcac-atgatagaaaaaccc 5573466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 39024900 - 39024855
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccc 86  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||    
T  39024900 tttaaacttcttatcatgtgcaaatttgcac-atgatagaaaaaccc 39024855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 40226028 - 40225987
Alignment:
Q  42 taaacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  40226028 taaacttcttaacatgtgcaaatttgcac-atgatagaaaaac 40225987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 12189631 - 12189587
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaacc 85  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||    
T  12189631 tttaaacttcttatcatgtgcaaatttgcac-atgatagaaaaacc 12189587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 12434059 - 12434015
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaacc 85  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||    
T  12434059 tttaaacttcttatcatgtgcaaatttgcac-atgatagaaaaacc 12434015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 35678318 - 35678270
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccctaa 89  Q
    ||||||||||||| ||||||||||||||||| |||||| |||||||||||    
T  35678318 tttaaacttcttatcatgtgcaaatttgcac-atgataaaaaaaccctaa 35678270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 39701846 - 39701802
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaacc 85  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||    
T  39701846 tttaaacttgttaacatgtgcaaatttgcac-atgatagaaaaacc 39701802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 45006104 - 45006151
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaacccta 88  Q
    |||||||||||||||||||||||||||||   |||||||||||||||||    
T  45006104 tttaaacttcttaacatgtgcaaatttgc-ttatgatagaaaaacccta 45006151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 9580152 - 9580106
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    |||||||||||||||||||| |||||||||| |||||| |||||||||    
T  9580152 tttaaacttcttaacatgtgtaaatttgcac-atgataaaaaaaccct 9580106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 26364033 - 26363987
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    |||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  26364033 tttaaatttcttaacatgcgcaaatttgcac-atgatagaaaaaccct 26363987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 71
Target Start/End: Complemental strand, 36967113 - 36967082
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcaca 71  Q
    ||||||||||||||||||||||||||||||||    
T  36967113 tttaaacttcttaacatgtgcaaatttgcaca 36967082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 38843839 - 38843885
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    ||||||||||||| ||||||||||||| ||| ||||||||||||||||    
T  38843839 tttaaacttcttagcatgtgcaaatttacac-atgatagaaaaaccct 38843885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 7978013 - 7978062
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccctaaa 90  Q
    ||||||||| ||||||| ||||||||||||  |||||||||||||||||||    
T  7978013 tttaaactttttaacatttgcaaatttgca-tatgatagaaaaaccctaaa 7978062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 14816169 - 14816124
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccc 86  Q
    |||||| |||||| ||||||||||||||||| |||||||||||||||    
T  14816169 tttaaatttcttatcatgtgcaaatttgcac-atgatagaaaaaccc 14816124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 14829571 - 14829616
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccc 86  Q
    |||||| |||||| ||||||||||||||||| |||||||||||||||    
T  14829571 tttaaatttcttatcatgtgcaaatttgcac-atgatagaaaaaccc 14829616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 16445779 - 16445731
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccctaa 89  Q
    |||||||||||||| |||||||||||||||| || |||||||||| ||||    
T  16445779 tttaaacttcttaatatgtgcaaatttgcac-ataatagaaaaactctaa 16445731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 19343879 - 19343831
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccctaa 89  Q
    ||||||| | ||||||||||||||||||||| |||||| |||||||||||    
T  19343879 tttaaacgtgttaacatgtgcaaatttgcac-atgataaaaaaaccctaa 19343831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 84
Target Start/End: Original strand, 31263033 - 31263077
Alignment:
Q  39 atttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    ||||||||| |||||||||||||||||||||  |||||||||||||    
T  31263033 atttaaactacttaacatgtgcaaatttgca-tatgatagaaaaac 31263077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 68
Target Start/End: Original strand, 297230 - 297258
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgc 68  Q
    |||||||||||||||||||||||||||||    
T  297230 tttaaacttcttaacatgtgcaaatttgc 297258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 15198933 - 15198898
Alignment:
Q  50 ttaacatgtgcaaatttgcacaatgatagaaaaaccc 86  Q
    ||||||||||||||||||||| |||||||||||||||    
T  15198933 ttaacatgtgcaaatttgcac-atgatagaaaaaccc 15198898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 69
Target Start/End: Complemental strand, 40210867 - 40210835
Alignment:
Q  37 taatttaaacttcttaacatgtgcaaatttgca 69  Q
    |||||||||| ||||||||||||||||||||||    
T  40210867 taatttaaacgtcttaacatgtgcaaatttgca 40210835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 87
Target Start/End: Complemental strand, 43717588 - 43717549
Alignment:
Q  47 ttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    ||||||||||||| |||||||||| ||||||||||||||||    
T  43717588 ttcttaacatgtgtaaatttgcac-atgatagaaaaaccct 43717549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 9332093 - 9332142
Alignment:
Q  37 taatttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  9332093 taatttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaaccct 9332142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 4969908 - 4969956
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccctaa 89  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  4969908 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaaccctaa 4969956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 820590 - 820539
Alignment:
Q  34 ttttaatttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccc 86  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  820590 ttttattttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaaccc 820539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 3561921 - 3561876
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccc 86  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||    
T  3561921 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaaccc 3561876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 18102277 - 18102232
Alignment:
Q  36 ttaatttaaacttcttaacatgtgcaaatttgcacaatgatagaaaa 82  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  18102277 ttaatttaaacttcttaacatgtgcaaatttgcac-atgatagaaaa 18102232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 39757153 - 39757108
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccc 86  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||    
T  39757153 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaaccc 39757108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 19889475 - 19889526
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccctaaact 92  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||| ||||    
T  19889475 tttaaacttcttatcatgtgcaaatttgcac-atgatagaaaaacccttaact 19889526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 24462998 - 24462951
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaacccta 88  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  24462998 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaatacccta 24462951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 25709442 - 25709399
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  25709442 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaac 25709399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 85
Target Start/End: Complemental strand, 36548506 - 36548459
Alignment:
Q  37 taatttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaacc 85  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||    
T  36548506 taatttaaacttcttaacatgtgcaaatttgcac-atgataaaaaaacc 36548459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 7040295 - 7040249
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||    
T  7040295 tttaaacttcttaacatgtgcaaatttgcac-atgatataaaaaccct 7040249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 7170137 - 7170183
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  7170137 tttaaacttcttatcatgtgcaaatttgcac-atgatagaaaaaccct 7170183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 32117949 - 32117995
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||    
T  32117949 tttaaatttcttaacatgtgcaaatttgcac-atgatagaaaaaccct 32117995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 46290145 - 46290191
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||    
T  46290145 tttaaatttcttaacatgtgcaaatttgcac-atgatagaaaaaccct 46290191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 33343123 - 33343168
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccc 86  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||    
T  33343123 tttaaatttcttaacatgtgcaaatttgcac-atgatagaaaaaccc 33343168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 34270396 - 34270441
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccc 86  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||    
T  34270396 tttaaatttcttaacatgtgcaaatttgcac-atgatagaaaaaccc 34270441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 384473 - 384431
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    ||||||||||||||||||||||||||||  |||||||||||||||    
T  384473 tttaaacttcttaacatgtgcaaatttg--caatgatagaaaaac 384431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 8091355 - 8091311
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaacc 85  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||    
T  8091355 tttaaacttcttaacatgtgtaaatttgcac-atgatagaaaaacc 8091311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 84
Target Start/End: Original strand, 8595031 - 8595075
Alignment:
Q  39 atttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||    
T  8595031 atttaaacttcttaacatgtgtaaatttgcac-atgatagaaaaac 8595075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 12650955 - 12651004
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccctaa 89  Q
    |||||| |||||||||||||||| || ||||||||||| |||||||||||    
T  12650955 tttaaatttcttaacatgtgcaatttagcacaatgatataaaaaccctaa 12651004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 12085975 - 12085928
Alignment:
Q  39 atttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    ||||||||||||||  |||||||||||||||| ||||||||||||||||    
T  12085975 atttaaacttcttattatgtgcaaatttgcac-atgatagaaaaaccct 12085928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 29398177 - 29398134
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    |||||||||||||||||||||||||||| || |||||||||||||    
T  29398177 tttaaacttcttaacatgtgcaaatttgaac-atgatagaaaaac 29398134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 29692583 - 29692540
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||    
T  29692583 tttaaacttcttaacatgtacaaatttgcac-atgatagaaaaac 29692540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 45501594 - 45501637
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    |||||||||||||| |||||||||||||||| |||||||||||||    
T  45501594 tttaaacttcttaagatgtgcaaatttgcac-atgatagaaaaac 45501637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 83
Target Start/End: Original strand, 5833490 - 5833532
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaa 83  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||    
T  5833490 tttaaactttttaacatgtgcaaatttgcac-atgatagaaaaa 5833532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 83
Target Start/End: Complemental strand, 26050504 - 26050462
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaa 83  Q
    |||||| |||||||||||||||||||||||| ||||||||||||    
T  26050504 tttaaatttcttaacatgtgcaaatttgcac-atgatagaaaaa 26050462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 83
Target Start/End: Complemental strand, 26059863 - 26059821
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaa 83  Q
    |||||| |||||||||||||||||||||||| ||||||||||||    
T  26059863 tttaaatttcttaacatgtgcaaatttgcac-atgatagaaaaa 26059821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 5909325 - 5909280
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccc 86  Q
    ||||||||||||| ||||||||||||| ||| |||||||||||||||    
T  5909325 tttaaacttcttatcatgtgcaaatttacac-atgatagaaaaaccc 5909280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 23982798 - 23982753
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccc 86  Q
    |||||| |||||||| ||||||||||||||| |||||||||||||||    
T  23982798 tttaaatttcttaacgtgtgcaaatttgcac-atgatagaaaaaccc 23982753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 82
Target Start/End: Original strand, 26037228 - 26037269
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaa 82  Q
    ||||||||||||||||| ||||||||||||| |||||||||||    
T  26037228 tttaaacttcttaacatctgcaaatttgcac-atgatagaaaa 26037269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 33072116 - 33072161
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccc 86  Q
    |||||| |||||||||||| ||||||||||| |||||||||||||||    
T  33072116 tttaaatttcttaacatgtacaaatttgcac-atgatagaaaaaccc 33072161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 47457504 - 47457459
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccc 86  Q
    |||||| || ||||||||||||||||||||| |||||||||||||||    
T  47457504 tttaaattttttaacatgtgcaaatttgcac-atgatagaaaaaccc 47457459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 22041765 - 22041725
Alignment:
Q  44 aacttcttaacatgtgcaaatttgcacaatgatagaaaaacc 85  Q
    |||||||||||| |||||||||||||| ||||||||||||||    
T  22041765 aacttcttaacaagtgcaaatttgcac-atgatagaaaaacc 22041725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 42750418 - 42750466
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccctaa 89  Q
    ||||||||||||||||| ||||||||||||  ||||||||||| ||||||    
T  42750418 tttaaacttcttaacatatgcaaatttgca-tatgatagaaaacccctaa 42750466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 22334064 - 22334021
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    ||||||||||||||||||| ||||||||||| ||||| |||||||    
T  22334064 tttaaacttcttaacatgtacaaatttgcac-atgattgaaaaac 22334021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 6180321 - 6180369
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccctaa 89  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6180321 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaaccctaa 6180369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 30172014 - 30172060
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30172014 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaaccct 30172060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 30187555 - 30187601
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30187555 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaaccct 30187601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 35512860 - 35512906
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  35512860 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaaccct 35512906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 313884 - 313929
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccc 86  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||    
T  313884 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaaccc 313929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 6570028 - 6569983
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccc 86  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||    
T  6570028 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaaccc 6569983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 34802102 - 34802147
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccc 86  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||    
T  34802102 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaaccc 34802147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 5875258 - 5875210
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccctaa 89  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  5875258 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaatcctaa 5875210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 25465297 - 25465340
Alignment:
Q  44 aacttcttaacatgtgcaaatttgcacaatgatagaaaaacccta 88  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  25465297 aacttcttaacatgtgcaaatttgcac-atgatagaaaaacccta 25465340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 39310829 - 39310782
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaacccta 88  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  39310829 tttaaactttttaacatgtgcaaatttgcac-atgatagaaaaacccta 39310782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 6307637 - 6307683
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||    
T  6307637 tttaaacttcttaacatgtgcaaatttgcac-atgatataaaaaccct 6307683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 23576457 - 23576411
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||    
T  23576457 tttaaatttcttaacatgtgcaaatttgcac-atgatagaaaaaccct 23576411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 39150370 - 39150324
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  39150370 tttaaacttcttatcatgtgcaaatttgcac-atgatagaaaaaccct 39150324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 51382449 - 51382495
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||    
T  51382449 tttaaacttcttaacatgtgcaaagttgcac-atgatagaaaaaccct 51382495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 1502763 - 1502718
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccc 86  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||    
T  1502763 tttaaatttcttaacatgtgcaaatttgcac-atgatagaaaaaccc 1502718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 6754606 - 6754651
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccc 86  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||    
T  6754606 tttaaacttcttatcatgtgcaaatttgcac-atgatagaaaaaccc 6754651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 36490914 - 36490959
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccc 86  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||    
T  36490914 tttaaacttcttaacatgtgcaaatttgctc-atgatagaaaaaccc 36490959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 86
Target Start/End: Original strand, 38812879 - 38812920
Alignment:
Q  44 aacttcttaacatgtgcaaatttgcacaatgatagaaaaaccc 86  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  38812879 aacttcttaacatgtgcaaatttgcac-atgatagaaaaaccc 38812920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 13322011 - 13322055
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaacc 85  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  13322011 tttaaacttcttaacatatgcaaatttgcac-atgatagaaaaacc 13322055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 30288907 - 30288863
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaacc 85  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||    
T  30288907 tttaaacttcttaacatgtgtaaatttgcac-atgatagaaaaacc 30288863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 41624964 - 41625011
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaacccta 88  Q
    ||||||||||||| ||| ||||||||||||| |||||||||||||||||    
T  41624964 tttaaacttcttatcatatgcaaatttgcac-atgatagaaaaacccta 41625011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 3168111 - 3168065
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    ||||||||| ||||| ||||||||||||||| ||||||||||||||||    
T  3168111 tttaaactttttaacgtgtgcaaatttgcac-atgatagaaaaaccct 3168065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 17919588 - 17919634
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    |||||||||||||  |||||||||||||||| ||||||||||||||||    
T  17919588 tttaaacttcttattatgtgcaaatttgcac-atgatagaaaaaccct 17919634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 22167470 - 22167516
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    ||||||||||||| ||||||||||||||||| ||||||| ||||||||    
T  22167470 tttaaacttcttatcatgtgcaaatttgcac-atgataggaaaaccct 22167516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 83
Target Start/End: Original strand, 35438850 - 35438892
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaa 83  Q
    |||||| |||||||||||||||||||||||| ||||||||||||    
T  35438850 tttaaatttcttaacatgtgcaaatttgcac-atgatagaaaaa 35438892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 44918159 - 44918205
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    |||||| ||||||||||||| |||||||||| ||||||||||||||||    
T  44918159 tttaaatttcttaacatgtgtaaatttgcac-atgatagaaaaaccct 44918205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 5879143 - 5879102
Alignment:
Q  43 aaacttcttaacatgtgcaaatttgcacaatgatagaaaaacc 85  Q
    |||||||||||||||||||||||| ||| ||||||||||||||    
T  5879143 aaacttcttaacatgtgcaaatttacac-atgatagaaaaacc 5879102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 10896488 - 10896532
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaacc 85  Q
    ||||||||||||||||||||||| ||| ||| ||||||||||||||    
T  10896488 tttaaacttcttaacatgtgcaattttacac-atgatagaaaaacc 10896532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 84
Target Start/End: Original strand, 23591840 - 23591876
Alignment:
Q  47 ttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    |||||||||||||||||||||||| |||||||||||||    
T  23591840 ttcttaacatgtgcaaatttgcac-atgatagaaaaac 23591876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 72
Target Start/End: Original strand, 8062339 - 8062371
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaa 72  Q
    ||||||||| |||||||||||||||||||||||    
T  8062339 tttaaactttttaacatgtgcaaatttgcacaa 8062371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 83
Target Start/End: Complemental strand, 41676596 - 41676561
Alignment:
Q  47 ttcttaacatgtgcaaatttgcacaatgatagaaaaa 83  Q
    |||||||||||||||||||||||| ||||||||||||    
T  41676596 ttcttaacatgtgcaaatttgcac-atgatagaaaaa 41676561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 51920474 - 51920431
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    |||||| || ||||||||||||||||||||| |||||||||||||    
T  51920474 tttaaatttattaacatgtgcaaatttgcac-atgatagaaaaac 51920431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 27362526 - 27362573
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaacccta 88  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  27362526 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaacccta 27362573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 85
Target Start/End: Complemental strand, 29190862 - 29190815
Alignment:
Q  37 taatttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaacc 85  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  29190862 taatttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaacc 29190815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 18882310 - 18882264
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18882310 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaaccct 18882264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 54495680 - 54495634
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  54495680 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaaccct 54495634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 35999990 - 35999945
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccc 86  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||    
T  35999990 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaaccc 35999945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 3085805 - 3085853
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccctaa 89  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  3085805 tttaaacttcttaaaatgtgcaaatttgcac-atgatagaaaaaccctaa 3085853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 49228786 - 49228834
Alignment:
Q  37 taatttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccc 86  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  49228786 taatttaaacttcttaacacgtgcaaatttgcac-atgatagaaaaaccc 49228834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 47326935 - 47326892
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  47326935 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaac 47326892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 47341731 - 47341688
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  47341731 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaac 47341688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 83
Target Start/End: Complemental strand, 16667427 - 16667385
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaa 83  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    
T  16667427 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaa 16667385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 19468329 - 19468375
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||    
T  19468329 tttaaacttcttaacatgtgcaaatttgcac-ataatagaaaaaccct 19468375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 53961454 - 53961500
Alignment:
Q  37 taatttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||    
T  53961454 taatttaaacttcttaacatgtgcaaatttgcac-acgatagaaaaac 53961500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 4779477 - 4779436
Alignment:
Q  42 taaacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  4779477 taaacttcttaacatgtgcaaatttgcac-atgatagaaaaac 4779436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 17409959 - 17410004
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccc 86  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||    
T  17409959 tttaaacttcttatcatgtgcaaatttgcac-atgatagaaaaaccc 17410004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 19450943 - 19450898
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccc 86  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||    
T  19450943 tttaaacttcttaacatgtgcaaatttgcac-ataatagaaaaaccc 19450898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 24684972 - 24685012
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaa 81  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  24684972 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaa 24685012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 23545611 - 23545654
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||    
T  23545611 tttaaacttattaacatgtgcaaatttgcac-atgatagaaaaac 23545654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 23051425 - 23051379
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    |||||| |||||| ||||||||||||||||| ||||||||||||||||    
T  23051425 tttaaatttcttatcatgtgcaaatttgcac-atgatagaaaaaccct 23051379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 83
Target Start/End: Original strand, 23553705 - 23553747
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaa 83  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||    
T  23553705 tttaaactttttaacatgtgcaaatttgcac-atgatagaaaaa 23553747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 27019395 - 27019441
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||    
T  27019395 tttaaactttttaacatatgcaaatttgcac-atgatagaaaaaccct 27019441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 39876965 - 39877011
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    |||||| |||||||||||||||||||| ||| ||||||||||||||||    
T  39876965 tttaaatttcttaacatgtgcaaatttacac-atgatagaaaaaccct 39877011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 40049693 - 40049739
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    |||||| |||||||||||||||||||||||| || |||||||||||||    
T  40049693 tttaaatttcttaacatgtgcaaatttgcac-ataatagaaaaaccct 40049739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 50352437 - 50352483
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    |||||| |||||||||||||||||||||||  ||||||||||||||||    
T  50352437 tttaaatttcttaacatgtgcaaatttgca-tatgatagaaaaaccct 50352483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 83
Target Start/End: Original strand, 52391433 - 52391475
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaa 83  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||    
T  52391433 tttaaacttcttaacatgtgcaaatttacac-atgatagaaaaa 52391475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 53376451 - 53376405
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    ||||||||||||||||||||||||||| ||| |||||| |||||||||    
T  53376451 tttaaacttcttaacatgtgcaaattttcac-atgataaaaaaaccct 53376405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 4329729 - 4329774
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccc 86  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||||||    
T  4329729 tttaaactttttaacatatgcaaatttgcac-atgatagaaaaaccc 4329774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 9759185 - 9759140
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccc 86  Q
    |||||| ||||||||||||||||||||| || |||||||||||||||    
T  9759185 tttaaatttcttaacatgtgcaaatttgtac-atgatagaaaaaccc 9759140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 23438290 - 23438339
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccctaaa 90  Q
    |||||| |||| ||||||||||||||||||| || ||||||||||||||||    
T  23438290 tttaaaattctcaacatgtgcaaatttgcac-ataatagaaaaaccctaaa 23438339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 33632246 - 33632201
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccc 86  Q
    ||||||||| |||||||||||||||| |||| |||||||||||||||    
T  33632246 tttaaactttttaacatgtgcaaattcgcac-atgatagaaaaaccc 33632201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 34941413 - 34941458
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccc 86  Q
    ||||||||||||| |||||||||||| |||| |||||||||||||||    
T  34941413 tttaaacttcttatcatgtgcaaattcgcac-atgatagaaaaaccc 34941458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 42479934 - 42479889
Alignment:
Q  41 ttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    ||||| |||||||||||||||||||||||| ||||||||||| ||||    
T  42479934 ttaaatttcttaacatgtgcaaatttgcac-atgatagaaaatccct 42479889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 86
Target Start/End: Original strand, 49181211 - 49181252
Alignment:
Q  44 aacttcttaacatgtgcaaatttgcacaatgatagaaaaaccc 86  Q
    |||||||||||| |||||||||||||| |||||||||||||||    
T  49181211 aacttcttaacaggtgcaaatttgcac-atgatagaaaaaccc 49181252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 13214455 - 13214415
Alignment:
Q  44 aacttcttaacatgtgcaaatttgcacaatgatagaaaaacc 85  Q
    ||||||||||||||||||||||||||| || |||||||||||    
T  13214455 aacttcttaacatgtgcaaatttgcac-ataatagaaaaacc 13214415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 46803934 - 46803977
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    ||||||||| |||| |||||||||||||||| |||||||||||||    
T  46803934 tttaaactttttaatatgtgcaaatttgcac-atgatagaaaaac 46803977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 6109524 - 6109571
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaacccta 88  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  6109524 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaacccta 6109571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 8065258 - 8065304
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  8065258 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaaccct 8065304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 16126602 - 16126556
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  16126602 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaaccct 16126556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 12016801 - 12016847
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||    
T  12016801 tttaaacttcttaatatgtgcaaatttgcac-atgatagaaaaaccct 12016847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 24729620 - 24729574
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||    
T  24729620 tttaaatttcttaacatgtgcaaatttgcac-atgatagaaaaaccct 24729574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 27665087 - 27665041
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  27665087 tttaaacttcttatcatgtgcaaatttgcac-atgatagaaaaaccct 27665041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 38248463 - 38248417
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||    
T  38248463 tttaaatttcttaacatgtgcaaatttgcac-atgatagaaaaaccct 38248417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 87
Target Start/End: Complemental strand, 43388520 - 43388478
Alignment:
Q  44 aacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  43388520 aacttcttaacatgtgcaaatttgcac-atgatagaaaaaccct 43388478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 5853504 - 5853463
Alignment:
Q  42 taaacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  5853504 taaacttcttaacatgtgcaaatttgcac-atgatagaaaaac 5853463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 9747452 - 9747497
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccc 86  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||    
T  9747452 tttaaacttcttaacatgtgaaaatttgcac-atgatagaaaaaccc 9747497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 16123410 - 16123455
Alignment:
Q  37 taatttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaa 83  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||    
T  16123410 taatttaaacttcttatcatgtgcaaatttgcac-atgatagaaaaa 16123455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 16493573 - 16493532
Alignment:
Q  42 taaacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  16493573 taaacttcttaacatgtgcaaatttgcac-atgatagaaaaac 16493532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 82
Target Start/End: Original strand, 19228560 - 19228601
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaa 82  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  19228560 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaa 19228601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 82
Target Start/End: Complemental strand, 26003389 - 26003348
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaa 82  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  26003389 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaa 26003348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 15411665 - 15411617
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccctaa 89  Q
    ||||||||||||||||||||||||||||||| ||| ||||||| ||||||    
T  15411665 tttaaacttcttaacatgtgcaaatttgcac-atgttagaaaacccctaa 15411617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 7757829 - 7757782
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaacccta 88  Q
    |||||| ||||||||||||| |||||||||| |||||||||||||||||    
T  7757829 tttaaatttcttaacatgtgtaaatttgcac-atgatagaaaaacccta 7757782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 11660933 - 11660894
Alignment:
Q  44 aacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  11660933 aacttcttaacatgtgcaaatttgcac-atgatagaaaaac 11660894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 15231966 - 15232009
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    ||||||||||||||||||||||||||||||| || ||||||||||    
T  15231966 tttaaacttcttaacatgtgcaaatttgcac-ataatagaaaaac 15232009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 20566060 - 20566017
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    |||||||||||||||||||| |||||||||| |||||||||||||    
T  20566060 tttaaacttcttaacatgtgtaaatttgcac-atgatagaaaaac 20566017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 25295892 - 25295849
Alignment:
Q  44 aacttcttaacatgtgcaaatttgcacaatgatagaaaaacccta 88  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||    
T  25295892 aacttcctaacatgtgcaaatttgca-aatgatagaaaaacccta 25295849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 87
Target Start/End: Complemental strand, 29157865 - 29157826
Alignment:
Q  47 ttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  29157865 ttcttaacatgtgcaaatttgcac-atgatagaaaaaccct 29157826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 4821411 - 4821457
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    ||||||||||||| ||||||||||||||||| || |||||||||||||    
T  4821411 tttaaacttcttatcatgtgcaaatttgcac-ataatagaaaaaccct 4821457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 5583601 - 5583555
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    |||||| |||||||||||||||||||||| | ||||||||||||||||    
T  5583601 tttaaatttcttaacatgtgcaaatttgcgc-atgatagaaaaaccct 5583555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 71
Target Start/End: Complemental strand, 8770929 - 8770898
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcaca 71  Q
    ||||||||||||||||||||||||||||||||    
T  8770929 tttaaacttcttaacatgtgcaaatttgcaca 8770898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 9450392 - 9450438
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    |||||| ||||||||||||||| |||||||| ||||||||||||||||    
T  9450392 tttaaatttcttaacatgtgcagatttgcac-atgatagaaaaaccct 9450438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 34817881 - 34817927
Alignment:
Q  41 ttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaacccta 88  Q
    ||||||||||||||||||| || ||||||| |||||||||||||||||    
T  34817881 ttaaacttcttaacatgtgtaagtttgcac-atgatagaaaaacccta 34817927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 22704674 - 22704715
Alignment:
Q  42 taaacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    |||||||||||| |||||||||||||||| |||||||||||||    
T  22704674 taaacttcttaagatgtgcaaatttgcac-atgatagaaaaac 22704715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 29142210 - 29142255
Alignment:
Q  41 ttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    |||||||||| |||||||| |||||||||| ||||||||||||||||    
T  29142210 ttaaacttctaaacatgtgtaaatttgcac-atgatagaaaaaccct 29142255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 72
Target Start/End: Complemental strand, 15749240 - 15749211
Alignment:
Q  43 aaacttcttaacatgtgcaaatttgcacaa 72  Q
    ||||||||||||||||||||||||||||||    
T  15749240 aaacttcttaacatgtgcaaatttgcacaa 15749211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 68
Target Start/End: Complemental strand, 13351254 - 13351226
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgc 68  Q
    |||||||||||||||||||||||||||||    
T  13351254 tttaaacttcttaacatgtgcaaatttgc 13351226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 17265539 - 17265586
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaacccta 88  Q
    |||||| ||||||||| ||||||||||| || |||||||||||||||||    
T  17265539 tttaaatttcttaacaagtgcaaatttggac-atgatagaaaaacccta 17265586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 23932700 - 23932743
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    |||||||||||||| || ||||||||||||| |||||||||||||    
T  23932700 tttaaacttcttaatatatgcaaatttgcac-atgatagaaaaac 23932743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 35729252 - 35729299
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaacccta 88  Q
    ||||||||||| |||||||||||||||| || ||| |||||||||||||    
T  35729252 tttaaacttctcaacatgtgcaaatttgtac-atgttagaaaaacccta 35729299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 45062337 - 45062376
Alignment:
Q  44 aacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    |||||||||| |||||||||||||||| |||||||||||||    
T  45062337 aacttcttaatatgtgcaaatttgcac-atgatagaaaaac 45062376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 37157 - 37111
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  37157 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaaccct 37111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 3398355 - 3398401
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  3398355 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaaccct 3398401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 4047547 - 4047593
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  4047547 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaaccct 4047593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 2795658 - 2795703
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccc 86  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||    
T  2795658 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaaccc 2795703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 11636866 - 11636914
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccctaa 89  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  11636866 tttaaacttcttatcatgtgcaaatttgcac-atgatagaaaaaccctaa 11636914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 8103623 - 8103576
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaacccta 88  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  8103623 tttaaacttcttatcatgtgcaaatttgcac-atgatagaaaaacccta 8103576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 12642040 - 12641993
Alignment:
Q  36 ttaatttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||    
T  12642040 ttaatttaaacttcttaacatgtgcaaatttgcac-attatagaaaaac 12641993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 83
Target Start/End: Original strand, 28630013 - 28630056
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaa 83  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||    
T  28630013 tttaaacttcttatcatgtgcaaatttgcacgatgatagaaaaa 28630056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 30839916 - 30839962
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||    
T  30839916 tttaaatttcttaacatgtgcaaatttgcac-atgatagaaaaaccct 30839962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 84
Target Start/End: Complemental strand, 31365996 - 31365950
Alignment:
Q  37 taatttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||    
T  31365996 taatttaaacttcttaacatgtacaaatttgcac-atgatagaaaaac 31365950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 36597714 - 36597760
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||    
T  36597714 tttaaatttcttaacatgtgcaaatttgcac-atgatagaaaaaccct 36597760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 82
Target Start/End: Original strand, 30893764 - 30893805
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaa 82  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  30893764 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaa 30893805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 6863691 - 6863738
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaacccta 88  Q
    |||||| || ||||||||||||||||||||| |||||||||||||||||    
T  6863691 tttaaattttttaacatgtgcaaatttgcac-atgatagaaaaacccta 6863738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 32020027 - 32019984
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    |||||| |||||||||||||||||||||||| |||||||||||||    
T  32020027 tttaaatttcttaacatgtgcaaatttgcac-atgatagaaaaac 32019984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 71
Target Start/End: Original strand, 41350337 - 41350368
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcaca 71  Q
    ||||||||||||||||||||||||||||||||    
T  41350337 tttaaacttcttaacatgtgcaaatttgcaca 41350368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 23995459 - 23995416
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    ||||||||||||||||||| ||||||||||| || ||||||||||    
T  23995459 tttaaacttcttaacatgtacaaatttgcac-ataatagaaaaac 23995416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 83
Target Start/End: Complemental strand, 29855937 - 29855898
Alignment:
Q  43 aaacttcttaacatgtgcaaatttgcacaatgatagaaaaa 83  Q
    |||||||||||||||||||||||| ||| ||||||||||||    
T  29855937 aaacttcttaacatgtgcaaatttacac-atgatagaaaaa 29855898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 40980508 - 40980551
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    ||||||||| |||| |||||||||||||||| |||||||||||||    
T  40980508 tttaaactttttaatatgtgcaaatttgcac-atgatagaaaaac 40980551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 23523081 - 23523127
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  23523081 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaaccct 23523127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 38389582 - 38389628
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  38389582 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaaccct 38389628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 50204538 - 50204584
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  50204538 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaaccct 50204584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 3863464 - 3863509
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccc 86  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||    
T  3863464 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaaccc 3863509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 51618185 - 51618229
Alignment:
Q  43 aaacttcttaacatgtgcaaatttgcacaatgatagaaaaacccta 88  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  51618185 aaacttcttaacatgtgcaaatttgcac-atgatagaaaaacccta 51618229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 40930186 - 40930229
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  40930186 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaac 40930229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 2571403 - 2571449
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||    
T  2571403 tttaaatttcttaacatgtgcaaatttgcac-atgatagaaaaaccct 2571449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 83
Target Start/End: Original strand, 8165781 - 8165823
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaa 83  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    
T  8165781 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaa 8165823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 10307901 - 10307947
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||    
T  10307901 tttaaatttcttaacatgtgcaaatttgcac-atgatagaaaaaccct 10307947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 11611111 - 11611157
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  11611111 tttaaacttcttatcatgtgcaaatttgcac-atgatagaaaaaccct 11611157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 16875068 - 16875022
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||    
T  16875068 tttaaacttcttaacatgtgcaaatttgcac-acgatagaaaaaccct 16875022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 95
Target Start/End: Original strand, 32553497 - 32553555
Alignment:
Q  36 ttaatttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccctaaacttat 95  Q
    |||||||||||||||||||||||| |||||| ||| ||||||||||||||| ||| ||||    
T  32553497 ttaatttaaacttcttaacatgtgtaaatttacac-atgatagaaaaacccaaaaattat 32553555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 29686455 - 29686500
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccc 86  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||    
T  29686455 tttaaacttcttatcatgtgcaaatttgcac-atgatagaaaaaccc 29686500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 33474514 - 33474473
Alignment:
Q  42 taaacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  33474514 taaacttcttaacatgtgcaaatttgcac-atgatagaaaaac 33474473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 88
Target Start/End: Original strand, 42180181 - 42180234
Alignment:
Q  34 ttttaatttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaacccta 88  Q
    ||||| ||||||||||||||||||||||||||| ||| |||||||||||| ||||    
T  42180181 ttttattttaaacttcttaacatgtgcaaatttacac-atgatagaaaaatccta 42180234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 51401575 - 51401624
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccctaaa 90  Q
    |||||||||||||||||||||||||||| || || ||||||||||||||||    
T  51401575 tttaaacttcttaacatgtgcaaatttgtac-ataatagaaaaaccctaaa 51401624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 20938192 - 20938235
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||    
T  20938192 tttaaacttcttatcatgtgcaaatttgcac-atgatagaaaaac 20938235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 83
Target Start/End: Original strand, 40497182 - 40497224
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaa 83  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||    
T  40497182 tttaaacttcttatcatgtgcaaatttgcac-atgatagaaaaa 40497224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 45983641 - 45983687
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    ||||||||||||||| ||||||||||||||| |||||| |||||||||    
T  45983641 tttaaacttcttaacctgtgcaaatttgcac-atgataaaaaaaccct 45983687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 83
Target Start/End: Original strand, 31318777 - 31318818
Alignment:
Q  41 ttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaa 83  Q
    |||||||||||||||||||||||||| ||| ||||||||||||    
T  31318777 ttaaacttcttaacatgtgcaaattttcac-atgatagaaaaa 31318818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 69
Target Start/End: Complemental strand, 23803089 - 23803060
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgca 69  Q
    ||||||||||||||||||||||||||||||    
T  23803089 tttaaacttcttaacatgtgcaaatttgca 23803060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 36426452 - 36426408
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaacc 85  Q
    |||||||||||||||||||| |||||| ||| ||||||||||||||    
T  36426452 tttaaacttcttaacatgtgtaaatttacac-atgatagaaaaacc 36426408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 36812393 - 36812435
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    |||||||||||||||||||||||||||  |||| |||||||||||    
T  36812393 tttaaacttcttaacatgtgcaaattt--acaaggatagaaaaac 36812435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 41151768 - 41151816
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccctaa 89  Q
    ||||||||||||| |||||| |||||||||| |||||||||||| |||||    
T  41151768 tttaaacttcttatcatgtgtaaatttgcac-atgatagaaaaatcctaa 41151816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 80
Target Start/End: Original strand, 11611049 - 11611088
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaa 80  Q
    ||||||||||||| ||||||||||||||||| |||||||||    
T  11611049 tttaaacttcttatcatgtgcaaatttgcac-atgatagaa 11611088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 13495429 - 13495472
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    ||||||||||||| ||||||||||||| ||| |||||||||||||    
T  13495429 tttaaacttcttatcatgtgcaaattttcac-atgatagaaaaac 13495472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 25633137 - 25633180
Alignment:
Q  44 aacttcttaacatgtgcaaatttgcacaatgatagaaaaacccta 88  Q
    |||||||||||| || ||||||||||| |||||||||||||||||    
T  25633137 aacttcttaacaagttcaaatttgcac-atgatagaaaaacccta 25633180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 35414848 - 35414809
Alignment:
Q  44 aacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    |||||||||||||||| |||||||||| |||||||||||||    
T  35414848 aacttcttaacatgtgtaaatttgcac-atgatagaaaaac 35414809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 37055409 - 37055362
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaacccta 88  Q
    |||||||||||||| |||||||||||| ||| |||||||||||| ||||    
T  37055409 tttaaacttcttaatatgtgcaaattttcac-atgatagaaaaatccta 37055362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 52822 - 52777
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccc 86  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||    
T  52822 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaaccc 52777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 145812 - 145857
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccc 86  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||    
T  145812 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaaccc 145857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 34692489 - 34692534
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccc 86  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||    
T  34692489 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaaccc 34692534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 29863345 - 29863301
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaacc 85  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  29863345 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaacc 29863301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 10887164 - 10887207
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  10887164 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaac 10887207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 28943812 - 28943765
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaacccta 88  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||    
T  28943812 tttaaatttcttaacatgtgcaaatttgcac-atgatagaaaaacccta 28943765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 13391810 - 13391856
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||    
T  13391810 tttaaacttcttaacatgcgcaaatttgcac-atgatagaaaaaccct 13391856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 17552630 - 17552584
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||    
T  17552630 tttaaatttcttaacatgtgcaaatttgcac-atgatagaaaaaccct 17552584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 84
Target Start/End: Complemental strand, 24979199 - 24979149
Alignment:
Q  33 attttaatttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    |||||| ||||||| ||||||||||||||||||||||| |||||||||||||    
T  24979199 attttattttaaacatcttaacatgtgcaaatttgcac-atgatagaaaaac 24979149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 2830724 - 2830679
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccc 86  Q
    |||||||||||||||||||||||||||| || |||||||||||||||    
T  2830724 tttaaacttcttaacatgtgcaaatttgtac-atgatagaaaaaccc 2830679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 3853078 - 3853123
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccc 86  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||    
T  3853078 tttaaatttcttaacatgtgcaaatttgcac-atgatagaaaaaccc 3853123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 14228169 - 14228124
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccc 86  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||    
T  14228169 tttaaatttcttaacatgtgcaaatttgcac-atgatagaaaaaccc 14228124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 18332731 - 18332686
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccc 86  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||    
T  18332731 tttaaacttcttaacatgtgaaaatttgcac-atgatagaaaaaccc 18332686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 83
Target Start/End: Complemental strand, 31069628 - 31069583
Alignment:
Q  37 taatttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaa 83  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||    
T  31069628 taatttaaacttcttaacatgtgtaaatttgcac-atgatagaaaaa 31069583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 90
Target Start/End: Complemental strand, 32614987 - 32614938
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccctaaa 90  Q
    |||||||||||||||||||||||||||| || |||||||||||||| ||||    
T  32614987 tttaaacttcttaacatgtgcaaatttgtac-atgatagaaaaaccttaaa 32614938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 3261213 - 3261261
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccctaa 89  Q
    ||||||||| |||||||||| |||||||||| ||||||||||||||||||    
T  3261213 tttaaactttttaacatgtgtaaatttgcac-atgatagaaaaaccctaa 3261261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 31568244 - 31568288
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaacc 85  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||    
T  31568244 tttaaactttttaacatgtgcaaatttgcac-atgatagaaaaacc 31568288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 6016991 - 6017038
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaacccta 88  Q
    ||||||||| ||||||||||||||||||||| |||||||||||| ||||    
T  6016991 tttaaactttttaacatgtgcaaatttgcac-atgatagaaaaatccta 6017038  T

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Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 80
Target Start/End: Original strand, 20979107 - 20979146
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaa 80  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  20979107 tttaaacttcttaacatgtgcaaatttgcac-atgatagaa 20979146  T

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Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 27819670 - 27819627
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    |||||||||||||||||||||||||||| || |||||||||||||    
T  27819670 tttaaacttcttaacatgtgcaaatttgtac-atgatagaaaaac 27819627  T

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Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 17596476 - 17596521
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccc 86  Q
    ||||||||||||| ||||| ||||||||||| |||||||||||||||    
T  17596476 tttaaacttcttatcatgtacaaatttgcac-atgatagaaaaaccc 17596521  T

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Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 87
Target Start/End: Original strand, 8467790 - 8467834
Alignment:
Q  42 taaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    ||||||||||||||||| ||||||||||  ||||||||||||||||    
T  8467790 taaacttcttaacatgtacaaatttgca-tatgatagaaaaaccct 8467834  T

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Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 29065468 - 29065424
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaacc 85  Q
    ||||||||| ||||||||||||| ||||||| ||||||||||||||    
T  29065468 tttaaactttttaacatgtgcaagtttgcac-atgatagaaaaacc 29065424  T

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Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 29120321 - 29120277
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaacc 85  Q
    ||||||||| ||||||||||||| ||||||| ||||||||||||||    
T  29120321 tttaaactttttaacatgtgcaagtttgcac-atgatagaaaaacc 29120277  T

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Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 30591203 - 30591163
Alignment:
Q  43 aaacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    ||||||||||||||||| |||||||||| |||||||||||||    
T  30591203 aaacttcttaacatgtgtaaatttgcac-atgatagaaaaac 30591163  T

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Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 33017859 - 33017907
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccctaa 89  Q
    |||||| || ||||||||||||||||||||| || |||||||||||||||    
T  33017859 tttaaattttttaacatgtgcaaatttgcac-ataatagaaaaaccctaa 33017907  T

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Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 4371974 - 4372017
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    |||||||||||||||||||| |||||||| | |||||||||||||    
T  4371974 tttaaacttcttaacatgtgtaaatttgcgc-atgatagaaaaac 4372017  T

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Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 85
Target Start/End: Original strand, 28470001 - 28470036
Alignment:
Q  49 cttaacatgtgcaaatttgcacaatgatagaaaaacc 85  Q
    |||||||||||||||||||||| ||||||||||||||    
T  28470001 cttaacatgtgcaaatttgcac-atgatagaaaaacc 28470036  T

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Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 29074481 - 29074438
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||||    
T  29074481 tttaaactttttaacatgtgcaagtttgcac-atgatagaaaaac 29074438  T

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Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 29079245 - 29079202
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||||    
T  29079245 tttaaactttttaacatgtgcaagtttgcac-atgatagaaaaac 29079202  T

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Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 29107054 - 29107011
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||||    
T  29107054 tttaaactttttaacatgtgcaagtttgcac-atgatagaaaaac 29107011  T

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Target: scaffold0011 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 13220 - 13264
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaacc 85  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  13220 tttaaacttcttaacatgtgcaaatttgcac-atgatagaaaaacc 13264  T

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Target: scaffold0073 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 16578 - 16532
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||    
T  16578 tttaaacttcttaacatgtgcaaatttgcac-atgatataaaaaccct 16532  T

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Target: scaffold0192 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 71
Target Start/End: Complemental strand, 13609 - 13575
Alignment:
Q  37 taatttaaacttcttaacatgtgcaaatttgcaca 71  Q
    |||||||||||||||||||||||||||||||||||    
T  13609 taatttaaacttcttaacatgtgcaaatttgcaca 13575  T

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Target: scaffold0727 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 83
Target Start/End: Original strand, 5826 - 5868
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaa 83  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||    
T  5826 tttaaactttttaacatgtgcaaatttgcac-atgatagaaaaa 5868  T

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Target: scaffold0136 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 71
Target Start/End: Complemental strand, 1486 - 1455
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcaca 71  Q
    ||||||||||||||||||||||||||||||||    
T  1486 tttaaacttcttaacatgtgcaaatttgcaca 1455  T

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Target: scaffold0018 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 182177 - 182223
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccct 87  Q
    ||||||||||||||||||| ||||||| ||| ||||||||||||||||    
T  182177 tttaaacttcttaacatgtacaaatttacac-atgatagaaaaaccct 182223  T

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Target: scaffold0155 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 3456 - 3411
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaaccc 86  Q
    |||||||||||||| |||||||||||| ||| |||||||||||||||    
T  3456 tttaaacttcttaatatgtgcaaatttacac-atgatagaaaaaccc 3411  T

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Target: scaffold0128 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 44337 - 44293
Alignment:
Q  40 tttaaacttcttaacatgtgcaaatttgcacaatgatagaaaaacc 85  Q
    ||||||||| |||| |||||||||||||||| ||||||||||||||    
T  44337 tttaaactttttaatatgtgcaaatttgcac-atgatagaaaaacc 44293  T

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Target: scaffold0036 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 94058 - 94018
Alignment:
Q  43 aaacttcttaacatgtgcaaatttgcacaatgatagaaaaac 84  Q
    |||||||||||||| ||||||||||||| |||||||||||||    
T  94058 aaacttcttaacatatgcaaatttgcac-atgatagaaaaac 94018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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