View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8581_high_6 (Length: 455)
Name: NF8581_high_6
Description: NF8581
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8581_high_6 |
 | |
|
| [»] scaffold0083 (1 HSPs) |
| | |
|
| [»] scaffold0002 (2 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 422; Significance: 0; HSPs: 31)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 422; E-Value: 0
Query Start/End: Original strand, 16 - 441
Target Start/End: Original strand, 9838150 - 9838575
Alignment:
| Q |
16 |
agtagagatacttgcttcaaaattctgctattagctacacatttcatactacctgatttgcttttacaagatcaacagaagatggctgcaactatgatag |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
9838150 |
agtagagatacttgcttcaaaattctgctattagctacacatttcatactacctgatttgcttttacaagatcaacagaagatggctgcaactatgattg |
9838249 |
T |
|
| Q |
116 |
gaggcgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcgtgattacatcaaaaacactaagctcaatgtctcact |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9838250 |
gaggcgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcgtgattacatcaaaaacactaagctcaatgtctcact |
9838349 |
T |
|
| Q |
216 |
cttgaggcagttacaagcaaccatgctcaatcttcaggctgttctagatgatgcagaggagaagcagatcagcaatccccatgtcaaacagtggcttgat |
315 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9838350 |
cttgaggcagttacaagcaaccatgctcaatcttcaggctgttctagatgatgcagaggagaagcagatcagcaatccccatgtcaaacagtggcttgat |
9838449 |
T |
|
| Q |
316 |
aacttgaaagatgttgtctttgatgctgaggatttgctcaacgaaatcagttacgattccctgcgatgcaaggtggagaatgcaaaagctcaaaacaaaa |
415 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9838450 |
aacttgaaagatgttgtctttgatgctgaggatttgctcaacgaaatcagttacgattccctgcgatgcaaggtggagaatgcaaaagctcaaaacaaaa |
9838549 |
T |
|
| Q |
416 |
ctaatcaggtgtggaacttcctttct |
441 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
9838550 |
ctaatcaggtgtggaacttcctttct |
9838575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 422; E-Value: 0
Query Start/End: Original strand, 16 - 441
Target Start/End: Original strand, 9849028 - 9849453
Alignment:
| Q |
16 |
agtagagatacttgcttcaaaattctgctattagctacacatttcatactacctgatttgcttttacaagatcaacagaagatggctgcaactatgatag |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
9849028 |
agtagagatacttgcttcaaaattctgctattagctacacatttcatactacctgatttgcttttacaagatcaacagaagatggctgcaactatgattg |
9849127 |
T |
|
| Q |
116 |
gaggcgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcgtgattacatcaaaaacactaagctcaatgtctcact |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9849128 |
gaggcgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcgtgattacatcaaaaacactaagctcaatgtctcact |
9849227 |
T |
|
| Q |
216 |
cttgaggcagttacaagcaaccatgctcaatcttcaggctgttctagatgatgcagaggagaagcagatcagcaatccccatgtcaaacagtggcttgat |
315 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9849228 |
cttgaggcagttacaagcaaccatgctcaatcttcaggctgttctagatgatgcagaggagaagcagatcagcaatccccatgtcaaacagtggcttgat |
9849327 |
T |
|
| Q |
316 |
aacttgaaagatgttgtctttgatgctgaggatttgctcaacgaaatcagttacgattccctgcgatgcaaggtggagaatgcaaaagctcaaaacaaaa |
415 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9849328 |
aacttgaaagatgttgtctttgatgctgaggatttgctcaacgaaatcagttacgattccctgcgatgcaaggtggagaatgcaaaagctcaaaacaaaa |
9849427 |
T |
|
| Q |
416 |
ctaatcaggtgtggaacttcctttct |
441 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
9849428 |
ctaatcaggtgtggaacttcctttct |
9849453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 72 - 440
Target Start/End: Original strand, 10076611 - 10076979
Alignment:
| Q |
72 |
tttgcttttacaagatcaacagaagatggctgcaactatgataggaggcgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaact |
171 |
Q |
| |
|
|||||||| | ||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
10076611 |
tttgctttaataagatcaactgaagatggctgcaactatgataggaggtgcttttctccatgcaactgttcagaccttagttgagaaacttacttcaact |
10076710 |
T |
|
| Q |
172 |
gagtttcgtgattacatcaaaaacactaagctcaatgtctcactcttgaggcagttacaagcaaccatgctcaatcttcaggctgttctagatgatgcag |
271 |
Q |
| |
|
||||||| |||||||||||||||||| || || ||||| |||||||| || ||||||||| ||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
10076711 |
gagtttcttgattacatcaaaaacacaaatctgaatgtatcactcttcagacagttacaaacaaccatgctcaatcttcaggctgtactagatgatgcag |
10076810 |
T |
|
| Q |
272 |
aggagaagcagatcagcaatccccatgtcaaacagtggcttgataacttgaaagatgttgtctttgatgctgaggatttgctcaacgaaatcagttacga |
371 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
10076811 |
aggagaagcagatcagcaatccccatgtcagacagtggcttgataacttgaaagatgctgtctttgatgccgaggacttgctcaacgaaatcagttacga |
10076910 |
T |
|
| Q |
372 |
ttccctgcgatgcaaggtggagaatgcaaaagctcaaaacaaaactaatcaggtgtggaacttcctttc |
440 |
Q |
| |
|
||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
10076911 |
ttcactgcgatgcaaggtggagaatgcacaagctcaaaacaaaactaatcaggtgttgaacttcctttc |
10076979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 68 - 441
Target Start/End: Complemental strand, 10376573 - 10376200
Alignment:
| Q |
68 |
ctgatttgcttttacaagatcaacagaagatggctgcaactatgataggaggcgcttttctctctgcaactgttcagaccttagttgagaaacttgcttc |
167 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10376573 |
ctgatttgcttttacaagatcaacagaagatggctgcaactatgataggaggtgcttttctctctgcaactgttcagaccttagttgagaaacttgcttc |
10376474 |
T |
|
| Q |
168 |
aactgagtttcgtgattacatcaaaaacactaagctcaatgtctcactcttgaggcagttacaagcaaccatgctcaatcttcaggctgttctagatgat |
267 |
Q |
| |
|
||| ||||||| |||||||||||||||||| || ||||||||||||||||||||||||||| || |||| |||||| |||||| | ||| || |||||| |
|
|
| T |
10376473 |
aacagagtttcttgattacatcaaaaacaccaaactcaatgtctcactcttgaggcagttaaaaacaacactgctcactcttcaagttgtgctggatgat |
10376374 |
T |
|
| Q |
268 |
gcagaggagaagcagatcagcaatccccatgtcaaacagtggcttgataacttgaaagatgttgtctttgatgctgaggatttgctcaacgaaatcagtt |
367 |
Q |
| |
|
||||||||||||||||||| |||||| |||||| || ||||||||| |||||||||||| | |||||||||||||||| |||||||| |||||||||| |
|
|
| T |
10376373 |
gcagaggagaagcagatcatcaatccttctgtcaagcaatggcttgatgacttgaaagatgctatctttgatgctgaggacttgctcaatgaaatcagtt |
10376274 |
T |
|
| Q |
368 |
acgattccctgcgatgcaaggtggagaatgcaaaagctcaaaacaaaactaatcaggtgtggaacttcctttct |
441 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
10376273 |
atgattccctgcgatgcaaggtggagaatgcaaaagctcaaaacaaaactaatcaggtgttgaacttcctttct |
10376200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 72 - 441
Target Start/End: Original strand, 10579947 - 10580315
Alignment:
| Q |
72 |
tttgcttttacaagatcaacagaagatggctgcaactatgataggaggcgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaact |
171 |
Q |
| |
|
|||||||| |||| ||||||| |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10579947 |
tttgctttaacaa-atcaacacaagatggctgcaactatgattggaggtgctttcctctctgcaactgttcagaccttagttgagaaacttgcttcaact |
10580045 |
T |
|
| Q |
172 |
gagtttcgtgattacatcaaaaacactaagctcaatgtctcactcttgaggcagttacaagcaaccatgctcaatcttcaggctgttctagatgatgcag |
271 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||| | || |||| |||||| |||||| | ||| || |||||||||| |
|
|
| T |
10580046 |
gagtttcttgattacatcaaaaacactaagctcaatgtctcactcttgaggcagcttaaaacaacactgctcactcttcaagttgtgctggatgatgcag |
10580145 |
T |
|
| Q |
272 |
aggagaagcagatcagcaatccccatgtcaaacagtggcttgataacttgaaagatgttgtctttgatgctgaggatttgctcaacgaaatcagttacga |
371 |
Q |
| |
|
||||||||||||||| ||||| |||||||| ||||||||| |||||||||||| | || ||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
10580146 |
aggagaagcagatcaataatcctgctgtcaaactatggcttgatgacttgaaagatgctatcattgatgctgaggacttgctcaatgaaatcagttacga |
10580245 |
T |
|
| Q |
372 |
ttccctgcgatgcaaggtggagaatgcaaaagctcaaaacaaaactaatcaggtgtggaacttcctttct |
441 |
Q |
| |
|
||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10580246 |
ttccctgcgatgcaaggtggagaatacacaagctcaaaacaaaactaatcaggtgtggaacttcctttct |
10580315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 72 - 440
Target Start/End: Complemental strand, 10434768 - 10434400
Alignment:
| Q |
72 |
tttgcttttacaagatcaacagaagatggctgcaactatgataggaggcgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaact |
171 |
Q |
| |
|
|||||||| |||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
10434768 |
tttgctttaacaatatcattagaagatggctgcaactatgataggaggagcttttctctctgcaactgttcaaaccttagttgagaaacttgcttcaaaa |
10434669 |
T |
|
| Q |
172 |
gagtttcgtgattacatcaaaaacactaagctcaatgtctcactcttgaggcagttacaagcaaccatgctcaatcttcaggctgttctagatgatgcag |
271 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||| |||||||||||||||| | || |||| | |||| |||||| | ||| || |||||||||| |
|
|
| T |
10434668 |
gagtttcgtgattacatcaaaaacaccaagctcaatgactcactcttgaggcagctgaaaacaacacttctcactcttcaagttgtgctggatgatgcag |
10434569 |
T |
|
| Q |
272 |
aggagaagcagatcagcaatccccatgtcaaacagtggcttgataacttgaaagatgttgtctttgatgctgaggatttgctcaacgaaatcagttacga |
371 |
Q |
| |
|
||||||||||||||| ||| || ||||||||| ||||||||| |||||||||||| |||||||||||| ||||| |||||||||||||||||||| || |
|
|
| T |
10434568 |
aggagaagcagatcaacaaacctgctgtcaaacaatggcttgatgacttgaaagatgctgtctttgatgccgaggacttgctcaacgaaatcagttatga |
10434469 |
T |
|
| Q |
372 |
ttccctgcgatgcaaggtggagaatgcaaaagctcaaaacaaaactaatcaggtgtggaacttcctttc |
440 |
Q |
| |
|
|||||| |||| ||||||||||||| || | ||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
10434468 |
ttcccttcgatccaaggtggagaatacacatgctcaaaacaaaactaatcaggtgttgaacttcctttc |
10434400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 72 - 439
Target Start/End: Complemental strand, 10364522 - 10364155
Alignment:
| Q |
72 |
tttgcttttacaagatcaacagaagatggctgcaactatgataggaggcgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaact |
171 |
Q |
| |
|
|||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10364522 |
tttgctttaacaatatcaacagaagatggctgcaactatgataggaggagcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaaca |
10364423 |
T |
|
| Q |
172 |
gagtttcgtgattacatcaaaaacactaagctcaatgtctcactcttgaggcagttacaagcaaccatgctcaatcttcaggctgttctagatgatgcag |
271 |
Q |
| |
|
||||||| |||||||||||||||||| || ||||||| |||||||||||||||||||||| |||| |||||| |||||| | ||| || ||||| |||| |
|
|
| T |
10364422 |
gagtttcttgattacatcaaaaacaccaaactcaatgactcactcttgaggcagttacaaacaacactgctcactcttcaagttgtgctggatgacgcag |
10364323 |
T |
|
| Q |
272 |
aggagaagcagatcagcaatccccatgtcaaacagtggcttgataacttgaaagatgttgtctttgatgctgaggatttgctcaacgaaatcagttacga |
371 |
Q |
| |
|
| ||||||||||||| |||||| ||||||||| ||||||||| ||||||||||| |||||||||||| ||||||||||| ||||||||||||| || |
|
|
| T |
10364322 |
aagagaagcagatcaacaatcctgctgtcaaacaatggcttgatggcttgaaagatgctgtctttgatgccgaggatttgcttcacgaaatcagttatga |
10364223 |
T |
|
| Q |
372 |
ttccctgcgatgcaaggtggagaatgcaaaagctcaaaacaaaactaatcaggtgtggaacttccttt |
439 |
Q |
| |
|
|||||||||||||| |||||| | | ||||| ||||| || ||||||||||||||||||||||| |
|
|
| T |
10364222 |
ttccctgcgatgcacaatggagagtaaacaagctggaaacagaagtaatcaggtgtggaacttccttt |
10364155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 112 - 440
Target Start/End: Original strand, 10088175 - 10088503
Alignment:
| Q |
112 |
ataggaggcgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcgtgattacatcaaaaacactaagctcaatgtct |
211 |
Q |
| |
|
|||||| | |||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||| | ||||||| |
|
|
| T |
10088175 |
ataggaagtgcttttctctctgcaactattcagaccttggttgagaaacttgcttcaacagagtttcgtgattacatcaaaaacaccaagttgaatgtct |
10088274 |
T |
|
| Q |
212 |
cactcttgaggcagttacaagcaaccatgctcaatcttcaggctgttctagatgatgcagaggagaagcagatcagcaatccccatgtcaaacagtggct |
311 |
Q |
| |
|
|||||| ||||||| | || |||| |||||| |||||| | ||| || |||||||| |||||||||||||||| |||||| |||||||| ||||| |
|
|
| T |
10088275 |
cactctcgaggcagctgaaaacaacactgctcactcttcaagttgtgctggatgatgcggaggagaagcagatcaacaatcctgctgtcaaactatggct |
10088374 |
T |
|
| Q |
312 |
tgataacttgaaagatgttgtctttgatgctgaggatttgctcaacgaaatcagttacgattccctgcgatgcaaggtggagaatgcaaaagctcaaaac |
411 |
Q |
| |
|
|||| |||||||||||| |||||||||||||||||| ||||||| |||||||||||| |||||||| ||||||||||||||||||||| ||||||||||| |
|
|
| T |
10088375 |
tgatgacttgaaagatgctgtctttgatgctgaggacttgctcagcgaaatcagttatgattcccttcgatgcaaggtggagaatgcacaagctcaaaac |
10088474 |
T |
|
| Q |
412 |
aaaactaatcaggtgtggaacttcctttc |
440 |
Q |
| |
|
|||| | |||||||| |||||||||||| |
|
|
| T |
10088475 |
aaaagttatcaggtgatgaacttcctttc |
10088503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 112 - 440
Target Start/End: Original strand, 10195058 - 10195386
Alignment:
| Q |
112 |
ataggaggcgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcgtgattacatcaaaaacactaagctcaatgtct |
211 |
Q |
| |
|
|||||| | |||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||| | ||||||| |
|
|
| T |
10195058 |
ataggaagtgcttttctctctgcaactattcagaccttggttgagaaacttgcttcaacagagtttcgtgattacatcaaaaacaccaagttgaatgtct |
10195157 |
T |
|
| Q |
212 |
cactcttgaggcagttacaagcaaccatgctcaatcttcaggctgttctagatgatgcagaggagaagcagatcagcaatccccatgtcaaacagtggct |
311 |
Q |
| |
|
|||||||||||||| | || |||| |||||| |||||| | ||| || |||||||| |||||||||||||||| |||||| |||||||| ||||| |
|
|
| T |
10195158 |
cactcttgaggcagctgaaaacaacactgctcactcttcaagttgtgctggatgatgcggaggagaagcagatcaacaatcctgctgtcaaactatggct |
10195257 |
T |
|
| Q |
312 |
tgataacttgaaagatgttgtctttgatgctgaggatttgctcaacgaaatcagttacgattccctgcgatgcaaggtggagaatgcaaaagctcaaaac |
411 |
Q |
| |
|
|||| |||||||||||| |||||||||||||||||| ||| ||| |||||||||||| |||||||| ||||||||||||||||||||| ||||||||||| |
|
|
| T |
10195258 |
tgatgacttgaaagatgctgtctttgatgctgaggacttgttcagcgaaatcagttatgattcccttcgatgcaaggtggagaatgcacaagctcaaaac |
10195357 |
T |
|
| Q |
412 |
aaaactaatcaggtgtggaacttcctttc |
440 |
Q |
| |
|
|||| | |||||||| |||||||||||| |
|
|
| T |
10195358 |
aaaagttatcaggtgatgaacttcctttc |
10195386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 62 - 440
Target Start/End: Original strand, 11768569 - 11768947
Alignment:
| Q |
62 |
tactacctgatttgcttttacaagatcaacagaagatggctgcaactatgataggaggcgcttttctctctgcaactgttcagaccttagttgagaaact |
161 |
Q |
| |
|
||||| |||||||| | | ||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||| | || ||||| |||||||||| |
|
|
| T |
11768569 |
tactagctgatttggtctaacaagatcaactgaagatggcggcaactatgataggaggcgcttttctctcggcaactatgcaaaccttgtttgagaaact |
11768668 |
T |
|
| Q |
162 |
tgcttcaactgagtttcgtgattacatcaaaaacactaagctcaatgtctcactcttgaggcagttacaagcaaccatgctcaatcttcaggctgttcta |
261 |
Q |
| |
|
||||||||| ||||||| |||||||||||||||||| ||||| |||||||||||||||||||| ||| || ||||| |||||| ||||||||||| || |
|
|
| T |
11768669 |
tgcttcaacagagtttcttgattacatcaaaaacaccaagctgaatgtctcactcttgaggcaattaaaaacaaccctgctcacacttcaggctgtactg |
11768768 |
T |
|
| Q |
262 |
gatgatgcagaggagaagcagatcagcaatccccatgtcaaacagtggcttgataacttgaaagatgttgtctttgatgctgaggatttgctcaacgaaa |
361 |
Q |
| |
|
|||||||| |||||||||||||| | ||||| ||||||||| ||||||||| |||||||||| | | ||||||||||||||||||| ||| | ||| |
|
|
| T |
11768769 |
gatgatgcggaggagaagcagatgaacaatcttgctgtcaaacaatggcttgatgacttgaaagacgctatctttgatgctgaggatttactcgatcaaa |
11768868 |
T |
|
| Q |
362 |
tcagttacgattccctgcgatgcaaggtggagaatgcaaaagctcaaaacaaaactaatcaggtgtggaacttcctttc |
440 |
Q |
| |
|
| ||||| || ||||| ||||||||| ||||||| | ||||| ||||||||||||||||||||||||||| ||||| |
|
|
| T |
11768869 |
taagttatgactccctccgatgcaagatggagaagaaacaagctagaaacaaaactaatcaggtgtggaacttactttc |
11768947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 94 - 441
Target Start/End: Original strand, 8860653 - 8861000
Alignment:
| Q |
94 |
aagatggctgcaactatgataggaggcgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcgtgattacatcaaaa |
193 |
Q |
| |
|
|||||||| |||||| || | ||||| || ||||||||||| |||| || ||| | |||| |||| ||||||| ||||||||||||| |||||| | |
|
|
| T |
8860653 |
aagatggcagcaactttggttggaggtgcatttctctctgcttctgtccaaaccatgcttgaccaactaacttcaaccgagtttcgtgatttcatcaaca |
8860752 |
T |
|
| Q |
194 |
acactaagctcaatgtctcactcttgaggcagttacaagcaaccatgctcaatcttcaggctgttctagatgatgcagaggagaagcagatcagcaatcc |
293 |
Q |
| |
|
||| ||||| || ||||||||||||| ||||||||||||||| |||| |||||| ||||| || ||||||||||||||||||||||||| ||||| |
|
|
| T |
8860753 |
acagaaagctgaacgtctcactcttgaagcagttacaagcaacgctgctggttcttcaagctgtgctggatgatgcagaggagaagcagatcaacaatcg |
8860852 |
T |
|
| Q |
294 |
ccatgtcaaacagtggcttgataacttgaaagatgttgtctttgatgctgaggatttgctcaacgaaatcagttacgattccctgcgatgcaaggtggag |
393 |
Q |
| |
|
||||||||| ||||||||| |||||||||||| | |||||||||||||||||||||||||| |||||||||| ||||| | ||||||||||||||| |
|
|
| T |
8860853 |
tgctgtcaaacaatggcttgatgacttgaaagatgctctctttgatgctgaggatttgctcaaccaaatcagttatgattcattacgatgcaaggtggag |
8860952 |
T |
|
| Q |
394 |
aatgcaaaagctcaaaacaaaactaatcaggtgtggaacttcctttct |
441 |
Q |
| |
|
|| || ||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
8860953 |
gatacacaagctgcaaacaaaactaatcaggtgtggaacttcctttct |
8861000 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 94 - 441
Target Start/End: Complemental strand, 11131728 - 11131381
Alignment:
| Q |
94 |
aagatggctgcaactatgataggaggcgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcgtgattacatcaaaa |
193 |
Q |
| |
|
|||||||| |||||| || | ||||| || ||||||||||| |||| || ||| | |||| ||||| ||||||||||||||||||||| |||||| | |
|
|
| T |
11131728 |
aagatggcagcaactttggttggaggtgcatttctctctgcttctgtccaaaccatgcttgacaaactaacttcaactgagtttcgtgatttcatcaaca |
11131629 |
T |
|
| Q |
194 |
acactaagctcaatgtctcactcttgaggcagttacaagcaaccatgctcaatcttcaggctgttctagatgatgcagaggagaagcagatcagcaatcc |
293 |
Q |
| |
|
||| ||||| |||||||||||||||| |||||||||| |||| |||| |||||| ||||| || |||||||| |||||||||||||||| ||| | |
|
|
| T |
11131628 |
acaaaaagctgaatgtctcactcttgaagcagttacaaacaacactgctggttcttcaagctgtgctggatgatgctgaggagaagcagatcaacaaccg |
11131529 |
T |
|
| Q |
294 |
ccatgtcaaacagtggcttgataacttgaaagatgttgtctttgatgctgaggatttgctcaacgaaatcagttacgattccctgcgatgcaaggtggag |
393 |
Q |
| |
|
||||||| | ||| ||||| |||||||||||| | |||||||||| ||||||||||| || |||| ||||| || || |||||||||||||||||| |
|
|
| T |
11131528 |
tgctgtcaaaaaatgggttgatgacttgaaagatgctatctttgatgcggaggatttgctgaatcaaattagttatgagtcactgcgatgcaaggtggag |
11131429 |
T |
|
| Q |
394 |
aatgcaaaagctcaaaacaaaactaatcaggtgtggaacttcctttct |
441 |
Q |
| |
|
||| || ||||| |||||||||||||||||| ||||||||||||||| |
|
|
| T |
11131428 |
aatacacaagctgcaaacaaaactaatcaggtctggaacttcctttct |
11131381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 94 - 441
Target Start/End: Original strand, 10888673 - 10889020
Alignment:
| Q |
94 |
aagatggctgcaactatgataggaggcgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcgtgattacatcaaaa |
193 |
Q |
| |
|
|||||||| |||||| || | ||||| || ||||||||||| |||| || ||| | |||| |||| ||||||||||||||||||||| |||||| | |
|
|
| T |
10888673 |
aagatggcagcaactttggttggaggtgcatttctctctgcttctgtccaaaccatgcttgaccaactaacttcaactgagtttcgtgatttcatcaaca |
10888772 |
T |
|
| Q |
194 |
acactaagctcaatgtctcactcttgaggcagttacaagcaaccatgctcaatcttcaggctgttctagatgatgcagaggagaagcagatcagcaatcc |
293 |
Q |
| |
|
||| ||||| |||||||||||||||| |||||||||| |||| |||| |||||| ||||| || |||||||| |||||||||||||||| ||| | |
|
|
| T |
10888773 |
acaaaaagctgaatgtctcactcttgaagcagttacaaacaacgctgctggttcttcaagctgtgctggatgatgctgaggagaagcagatcaacaaccg |
10888872 |
T |
|
| Q |
294 |
ccatgtcaaacagtggcttgataacttgaaagatgttgtctttgatgctgaggatttgctcaacgaaatcagttacgattccctgcgatgcaaggtggag |
393 |
Q |
| |
|
||||||||| ||||||||| |||||||||||| |||||||||||| ||||||||||| ||| |||| ||||| || || ||||||||||||||||| |
|
|
| T |
10888873 |
tgctgtcaaacaatggcttgatgacttgaaagatgctgtctttgatgcggaggatttgctgaaccaaattagttatgaatcattgcgatgcaaggtggag |
10888972 |
T |
|
| Q |
394 |
aatgcaaaagctcaaaacaaaactaatcaggtgtggaacttcctttct |
441 |
Q |
| |
|
||| || || | ||||||||||| ||||||||||| |||||||||| |
|
|
| T |
10888973 |
aatacacaatccacaaacaaaactagtcaggtgtggagcttcctttct |
10889020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 94 - 441
Target Start/End: Complemental strand, 11149556 - 11149209
Alignment:
| Q |
94 |
aagatggctgcaactatgataggaggcgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcgtgattacatcaaaa |
193 |
Q |
| |
|
||||||||||||||| || | ||||| || ||||||||||| |||| || | | | |||| |||| ||||||||||||||||||||| |||||| | |
|
|
| T |
11149556 |
aagatggctgcaactttggttggaggtgcatttctctctgcttctgtccaaagcatgcttgaccaactaacttcaactgagtttcgtgatttcatcaaca |
11149457 |
T |
|
| Q |
194 |
acactaagctcaatgtctcactcttgaggcagttacaagcaaccatgctcaatcttcaggctgttctagatgatgcagaggagaagcagatcagcaatcc |
293 |
Q |
| |
|
||| ||||| |||||||||||||||| |||||||||| |||| |||| |||||| ||||| || |||||||| || ||||||||||||| |||||| |
|
|
| T |
11149456 |
acaaaaagctgaatgtctcactcttgaagcagttacaaacaacactgctggttcttcaagctgtgctggatgatgctgatgagaagcagatcaacaatcc |
11149357 |
T |
|
| Q |
294 |
ccatgtcaaacagtggcttgataacttgaaagatgttgtctttgatgctgaggatttgctcaacgaaatcagttacgattccctgcgatgcaaggtggag |
393 |
Q |
| |
|
||||||||| ||||||||| |||||||||||| | |||||||||| ||||||||||| || |||| ||||| || || |||||||||||||||||| |
|
|
| T |
11149356 |
tgctgtcaaacaatggcttgatgacttgaaagatgctatctttgatgccgaggatttgctgaatcaaattagttatgaatcactgcgatgcaaggtggag |
11149257 |
T |
|
| Q |
394 |
aatgcaaaagctcaaaacaaaactaatcaggtgtggaacttcctttct |
441 |
Q |
| |
|
||| || || | ||||||||||| ||||||||||| |||||||||| |
|
|
| T |
11149256 |
aatacacaatccacaaacaaaactagtcaggtgtggagcttcctttct |
11149209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 94 - 441
Target Start/End: Complemental strand, 11160719 - 11160372
Alignment:
| Q |
94 |
aagatggctgcaactatgataggaggcgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcgtgattacatcaaaa |
193 |
Q |
| |
|
||||| ||||||||| || | ||||| || ||||| ||||| ||||||| ||| || |||| ||||| ||||||| ||||||||||||| |||||| | |
|
|
| T |
11160719 |
aagattgctgcaactttggttggaggtgcatttctatctgcttctgttcaaaccatacttgacaaactatcttcaaccgagtttcgtgatttcatcaaca |
11160620 |
T |
|
| Q |
194 |
acactaagctcaatgtctcactcttgaggcagttacaagcaaccatgctcaatcttcaggctgttctagatgatgcagaggagaagcagatcagcaatcc |
293 |
Q |
| |
|
| | ||| | |||||||||||||||| |||||||||| |||| |||| ||| || ||||| || |||||||||||||||||| |||||| ||| | |
|
|
| T |
11160619 |
ataagaagttgaatgtctcactcttgaagcagttacaaacaacgttgctggttctacaagctgtgctggatgatgcagaggagaagtagatcaacaaccg |
11160520 |
T |
|
| Q |
294 |
ccatgtcaaacagtggcttgataacttgaaagatgttgtctttgatgctgaggatttgctcaacgaaatcagttacgattccctgcgatgcaaggtggag |
393 |
Q |
| |
|
||||||||| ||||||||| |||||||||||| |||||||||||| ||||||||||| || |||| ||||| || || |||||||||||||||||| |
|
|
| T |
11160519 |
tgctgtcaaacaatggcttgatgacttgaaagatgctgtctttgatgccgaggatttgctgaatcaaattagttatgaatcactgcgatgcaaggtggag |
11160420 |
T |
|
| Q |
394 |
aatgcaaaagctcaaaacaaaactaatcaggtgtggaacttcctttct |
441 |
Q |
| |
|
||| || || | ||||||||||| ||||||||||| |||||||||| |
|
|
| T |
11160419 |
aatacacaatccacaaacaaaactagtcaggtgtggagcttcctttct |
11160372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 228 - 354
Target Start/End: Original strand, 10085609 - 10085735
Alignment:
| Q |
228 |
acaagcaaccatgctcaatcttcaggctgttctagatgatgcagaggagaagcagatcagcaatccccatgtcaaacagtggcttgataacttgaaagat |
327 |
Q |
| |
|
|||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10085609 |
acaaacaaccatgctcaatcttcaggctgtactagatgatgcaaaggagaagcagatcagtaatccccatgtcaaacagtggcttgataacttgaaagat |
10085708 |
T |
|
| Q |
328 |
gttgtctttgatgctgaggatttgctc |
354 |
Q |
| |
|
||| ||||||||||||| ||||||||| |
|
|
| T |
10085709 |
gttttctttgatgctgaagatttgctc |
10085735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 228 - 354
Target Start/End: Original strand, 10192529 - 10192655
Alignment:
| Q |
228 |
acaagcaaccatgctcaatcttcaggctgttctagatgatgcagaggagaagcagatcagcaatccccatgtcaaacagtggcttgataacttgaaagat |
327 |
Q |
| |
|
|||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10192529 |
acaaacaaccatgctcaatcttcaggctgtactagatgatgcaaaggagaagcagatcagtaatccccatgtcaaacagtggcttgataacttgaaagat |
10192628 |
T |
|
| Q |
328 |
gttgtctttgatgctgaggatttgctc |
354 |
Q |
| |
|
||| ||||||||||||| ||||||||| |
|
|
| T |
10192629 |
gttttctttgatgctgaagatttgctc |
10192655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 92 - 432
Target Start/End: Original strand, 13332269 - 13332609
Alignment:
| Q |
92 |
agaagatggctgcaactatgataggaggcgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcgtgattacatcaa |
191 |
Q |
| |
|
||||||||||||||||| || | ||||| |||||||||||||| ||||||||||| ||||||||||||||||||||| |||||| |||||||||||| |
|
|
| T |
13332269 |
agaagatggctgcaactttggtgggaggggcttttctctctgctactgttcagactttagttgagaaacttgcttcacaagagttttgtgattacatcag |
13332368 |
T |
|
| Q |
192 |
aaacactaagctcaatgtctcactcttgaggcagttacaagcaaccatgctcaatcttcaggctgttctagatgatgcagaggagaagcagatcagcaat |
291 |
Q |
| |
|
|||||| ||||| ||| |||||| ||| |||| || |||| ||||| ||||||||| || || ||||||||||| ||||||| |||| ||| |
|
|
| T |
13332369 |
aaacaccaagctgaattcctcactgttggcagagttggaaacaacactgctcgctcttcaggcggtgctggatgatgcagaacagaagcaaatcaccaac |
13332468 |
T |
|
| Q |
292 |
ccccatgtcaaacagtggcttgataacttgaaagatgttgtctttgatgctgaggatttgctcaacgaaatcagttacgattccctgcgatgcaaggtgg |
391 |
Q |
| |
|
| ||||||||| ||| | ||| | ||||||||| ||| |||||||||||||||||| ||| |||||| |||||| ||||||||||| ||||||| |
|
|
| T |
13332469 |
actgctgtcaaacaatggttggatcagctgaaagatgcaatctatgatgctgaggatttgcttaaccaaatcaattacgactccctgcgatgtaaggtgg |
13332568 |
T |
|
| Q |
392 |
agaatgcaaaagctcaaaacaaaactaatcaggtgtggaac |
432 |
Q |
| |
|
|||| | ||||| |||||| ||||||||||| |||||| |
|
|
| T |
13332569 |
agaagaaacaagctgaaaacatgactaatcaggtttggaac |
13332609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 86 - 192
Target Start/End: Original strand, 10505144 - 10505250
Alignment:
| Q |
86 |
atcaacagaagatggctgcaactatgataggaggcgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcgtgatta |
185 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |
|
|
| T |
10505144 |
atcaacagaagatggctgcaactatgataggaggaacttttctctctgcaactgttcagaccttagttgacaaacttgcttcaacagagtttcgtgatta |
10505243 |
T |
|
| Q |
186 |
catcaaa |
192 |
Q |
| |
|
||||||| |
|
|
| T |
10505244 |
catcaaa |
10505250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 92 - 432
Target Start/End: Original strand, 13170396 - 13170736
Alignment:
| Q |
92 |
agaagatggctgcaactatgataggaggcgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcgtgattacatcaa |
191 |
Q |
| |
|
||||||||||||||||| || | ||||| |||||||||||||| ||||||||||| ||||||||||||||||||||| |||||| |||||||||||| |
|
|
| T |
13170396 |
agaagatggctgcaactttggtgggaggggcttttctctctgctactgttcagactttagttgagaaacttgcttcacaagagttttgtgattacatcag |
13170495 |
T |
|
| Q |
192 |
aaacactaagctcaatgtctcactcttgaggcagttacaagcaaccatgctcaatcttcaggctgttctagatgatgcagaggagaagcagatcagcaat |
291 |
Q |
| |
|
|||||| ||||| ||| |||||| ||| |||| || |||| ||||| ||||||||| ||||| ||||||||||| ||||||| |||| ||| |
|
|
| T |
13170496 |
aaacaccaagctgaattcctcactgttggcagagttggaaacaacactgctcgctcttcaggcggttcttgatgatgcagaacagaagcaaatcaccaac |
13170595 |
T |
|
| Q |
292 |
ccccatgtcaaacagtggcttgataacttgaaagatgttgtctttgatgctgaggatttgctcaacgaaatcagttacgattccctgcgatgcaaggtgg |
391 |
Q |
| |
|
| ||||||||| ||| | ||| | ||||||||| ||| |||||||||||||||||| ||| |||||| |||||| ||||| ||||| ||||||| |
|
|
| T |
13170596 |
actgctgtcaaacaatggatggatcaactgaaagatgcaatctatgatgctgaggatttgcttaaccaaatcaattacgactccctccgatgtaaggtgg |
13170695 |
T |
|
| Q |
392 |
agaatgcaaaagctcaaaacaaaactaatcaggtgtggaac |
432 |
Q |
| |
|
|||| | || || |||||| ||||||||||| |||||| |
|
|
| T |
13170696 |
agaagatacaatctgaaaacatgactaatcaggtttggaac |
13170736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 92 - 432
Target Start/End: Original strand, 13160345 - 13160685
Alignment:
| Q |
92 |
agaagatggctgcaactatgataggaggcgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcgtgattacatcaa |
191 |
Q |
| |
|
||||||||||||||||| || | ||||| |||||||||||||| ||||||||||| ||||||| ||||||||||||| |||||| |||||||||||| |
|
|
| T |
13160345 |
agaagatggctgcaactttggtgggaggggcttttctctctgctactgttcagactttagttgcgaaacttgcttcacaagagttttgtgattacatcag |
13160444 |
T |
|
| Q |
192 |
aaacactaagctcaatgtctcactcttgaggcagttacaagcaaccatgctcaatcttcaggctgttctagatgatgcagaggagaagcagatcagcaat |
291 |
Q |
| |
|
|||||| ||||| ||| |||||| ||| |||| || |||| ||||| |||||||| || || ||||||||||| |||||| |||| ||| |
|
|
| T |
13160445 |
aaacaccaagctgaattcctcactgttggcagagttggaaacaacactgctcgctcttcaggtggtgctggatgatgcagaactgaagcaaatcaccaac |
13160544 |
T |
|
| Q |
292 |
ccccatgtcaaacagtggcttgataacttgaaagatgttgtctttgatgctgaggatttgctcaacgaaatcagttacgattccctgcgatgcaaggtgg |
391 |
Q |
| |
|
| ||||||||| ||| | ||| | ||||||||| ||| |||||||||||||||||| ||| |||||| |||||| ||||||||||| | ||||| |
|
|
| T |
13160545 |
actgctgtcaaacaatggatggatcaactgaaagatgcaatctatgatgctgaggatttgcttaaccaaatcaattacgactccctgcgatgtacggtgg |
13160644 |
T |
|
| Q |
392 |
agaatgcaaaagctcaaaacaaaactaatcaggtgtggaac |
432 |
Q |
| |
|
|||| | ||||| |||||| ||||||||||| |||||| |
|
|
| T |
13160645 |
agaagaaacaagctgaaaacatgactaatcaggtttggaac |
13160685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 92 - 432
Target Start/End: Original strand, 13289030 - 13289370
Alignment:
| Q |
92 |
agaagatggctgcaactatgataggaggcgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcgtgattacatcaa |
191 |
Q |
| |
|
|||| |||||||||||| || | ||||| |||||||||||||| ||||||||||| ||||||||||||||||||||| |||||| |||||||||||| |
|
|
| T |
13289030 |
agaaaatggctgcaactttggtgggaggagcttttctctctgctactgttcagactttagttgagaaacttgcttcacaagagttttgtgattacatcag |
13289129 |
T |
|
| Q |
192 |
aaacactaagctcaatgtctcactcttgaggcagttacaagcaaccatgctcaatcttcaggctgttctagatgatgcagaggagaagcagatcagcaat |
291 |
Q |
| |
|
||||| ||||| ||| |||||||||| |||| || |||| | ||| |||||||| || || ||||||||||| |||||| |||| ||| |
|
|
| T |
13289130 |
aaacaacaagctgaattcctcactcttggcagagttggaaacaacactactcgctcttcaggtggtgctggatgatgcagaactgaagcaaatcaccaac |
13289229 |
T |
|
| Q |
292 |
ccccatgtcaaacagtggcttgataacttgaaagatgttgtctttgatgctgaggatttgctcaacgaaatcagttacgattccctgcgatgcaaggtgg |
391 |
Q |
| |
|
| ||||||||| ||| | ||| | ||||||||| ||| |||||||||||||||||| ||| |||||| |||||| ||||||||||| ||||||| |
|
|
| T |
13289230 |
actgctgtcaaacaatggttggatcagctgaaagatgcaatctatgatgctgaggatttgcttaaccaaatcaattacgactccctgcgatgtaaggtgg |
13289329 |
T |
|
| Q |
392 |
agaatgcaaaagctcaaaacaaaactaatcaggtgtggaac |
432 |
Q |
| |
|
|||| | ||||| |||||| ||||||||||| |||||| |
|
|
| T |
13289330 |
agaagaaacaagctgaaaacatgactaatcaggtttggaac |
13289370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 92 - 432
Target Start/End: Original strand, 13343454 - 13343794
Alignment:
| Q |
92 |
agaagatggctgcaactatgataggaggcgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcgtgattacatcaa |
191 |
Q |
| |
|
|||| |||||||||||| || | ||||| |||||||||||||| ||||||||||| ||||||||||||||||||||| |||||| |||||||||| | |
|
|
| T |
13343454 |
agaaaatggctgcaactttggtgggaggggcttttctctctgctactgttcagactttagttgagaaacttgcttcacaagagttttgtgattacataag |
13343553 |
T |
|
| Q |
192 |
aaacactaagctcaatgtctcactcttgaggcagttacaagcaaccatgctcaatcttcaggctgttctagatgatgcagaggagaagcagatcagcaat |
291 |
Q |
| |
|
|||||| ||||| ||| ||| || || |||| || |||| ||||| ||||||||| || || ||||||||||| | ||||| |||| ||| |
|
|
| T |
13343554 |
aaacaccaagctgaattcctcgctgtttgcagagttggaaacaacactgctcgctcttcaggcggtgctggatgatgcagaacataagcaaatcaccaac |
13343653 |
T |
|
| Q |
292 |
ccccatgtcaaacagtggcttgataacttgaaagatgttgtctttgatgctgaggatttgctcaacgaaatcagttacgattccctgcgatgcaaggtgg |
391 |
Q |
| |
|
| ||||||||| ||| | ||| | ||||||||| ||| |||||||||||||||||| ||| |||||| ||||| ||||||||||| | ||||| |
|
|
| T |
13343654 |
actgctgtcaaacaatggttggatcagctgaaagatgcaatctatgatgctgaggatttgcttaaccaaatcaactacgactccctgcgatgtacggtgg |
13343753 |
T |
|
| Q |
392 |
agaatgcaaaagctcaaaacaaaactaatcaggtgtggaac |
432 |
Q |
| |
|
|||| | ||||| |||||| ||||||||||| |||||| |
|
|
| T |
13343754 |
agaagaaacaagctgaaaacatgactaatcaggtttggaac |
13343794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 10084150 - 10084219
Alignment:
| Q |
157 |
aaacttgcttcaactgagtttcgtgattacatcaaaaacactaagctcaatgtctcactcttgaggcagt |
226 |
Q |
| |
|
|||||||||||||| || |||| |||||||||||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
10084150 |
aaacttgcttcaacagattttcttgattacatcaaaaacaccaagccaaatgtctcactcttgaggcagt |
10084219 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 395
Target Start/End: Original strand, 10126435 - 10126584
Alignment:
| Q |
246 |
tcttcaggctgttctagatgatgcagaggagaagcagatcagcaatccccatgtcaaacagtggcttgataacttgaaagatgttgtctttgatgctgag |
345 |
Q |
| |
|
|||| ||| ||| ||||||||||||||||||||||||||| ||| ||| ||||||| ||||| ||| || ||||||| ||| |||||||||| |
|
|
| T |
10126435 |
tcttgaggttgtactagatgatgcagaggagaagcagatcctcaaacccagaatcaaacaatggctggatcggttaaaagatgcaatctatgatgctgag |
10126534 |
T |
|
| Q |
346 |
gatttgctcaacgaaatcagttacgattccctgcgatgcaaggtggagaa |
395 |
Q |
| |
|
||||||||||| ||||||| ||| || |||| ||||||||| ||||||| |
|
|
| T |
10126535 |
gatttgctcaatcaaatcagctacaatgccctacgatgcaagctggagaa |
10126584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 157 - 222
Target Start/End: Original strand, 10191073 - 10191138
Alignment:
| Q |
157 |
aaacttgcttcaactgagtttcgtgattacatcaaaaacactaagctcaatgtctcactcttgagg |
222 |
Q |
| |
|
|||||||||||||| || |||| |||||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
10191073 |
aaacttgcttcaacagattttcttgattacatcaaaaacaccaagccaaatgtctcactcttgagg |
10191138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 246 - 395
Target Start/End: Original strand, 10260205 - 10260354
Alignment:
| Q |
246 |
tcttcaggctgttctagatgatgcagaggagaagcagatcagcaatccccatgtcaaacagtggcttgataacttgaaagatgttgtctttgatgctgag |
345 |
Q |
| |
|
|||| ||| ||| ||||||||||||||||||||||||||| ||| ||| ||||||| ||| | ||| || ||||||| ||| |||||||||| |
|
|
| T |
10260205 |
tcttgaggttgtactagatgatgcagaggagaagcagatcctcaaacccagaatcaaacaatggttggatcggttaaaagatgcaatctatgatgctgag |
10260304 |
T |
|
| Q |
346 |
gatttgctcaacgaaatcagttacgattccctgcgatgcaaggtggagaa |
395 |
Q |
| |
|
||||||||||| ||||||| ||| || |||| ||||||||| ||||||| |
|
|
| T |
10260305 |
gatttgctcaataaaatcagctacaatgccctacgatgcaagctggagaa |
10260354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 392
Target Start/End: Original strand, 10526929 - 10527024
Alignment:
| Q |
297 |
tgtcaaacagtggcttgataacttgaaagatgttgtctttgatgctgaggatttgctcaacgaaatcagttacgattccctgcgatgcaaggtgga |
392 |
Q |
| |
|
||||||||| |||||| || |||||||||||| | ||||||||||| |||||||| || |||||| |||||| | ||||| ||||||||||| |
|
|
| T |
10526929 |
tgtcaaacaatggcttcatgacttgaaagatgcaatatttgatgctgaagatttgcttgacttaatcagctacgatgctctgcggtgcaaggtgga |
10527024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 353
Target Start/End: Original strand, 10517058 - 10517114
Alignment:
| Q |
297 |
tgtcaaacagtggcttgataacttgaaagatgttgtctttgatgctgaggatttgct |
353 |
Q |
| |
|
||||||||| ||||||||| |||||||||||| |||||||| |||| |||||||| |
|
|
| T |
10517058 |
tgtcaaacaatggcttgatgacttgaaagatgcaatctttgattctgaagatttgct |
10517114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 353
Target Start/End: Original strand, 10541544 - 10541600
Alignment:
| Q |
297 |
tgtcaaacagtggcttgataacttgaaagatgttgtctttgatgctgaggatttgct |
353 |
Q |
| |
|
|||||| || ||||||||| |||||||||||| ||||||||||||| |||||||| |
|
|
| T |
10541544 |
tgtcaagcaatggcttgatgacttgaaagatgcaatctttgatgctgaagatttgct |
10541600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 353
Target Start/End: Complemental strand, 11782478 - 11782422
Alignment:
| Q |
297 |
tgtcaaacagtggcttgataacttgaaagatgttgtctttgatgctgaggatttgct |
353 |
Q |
| |
|
||||||||| ||||||||| |||||||||||| | ||||||||||| |||||||| |
|
|
| T |
11782478 |
tgtcaaacaatggcttgatgacttgaaagatgcaatatttgatgctgaagatttgct |
11782422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 56 - 440
Target Start/End: Complemental strand, 50545 - 50161
Alignment:
| Q |
56 |
atttcatactacctgatttgcttttacaagatcaacagaagatggctgcaactatgataggaggcgcttttctctctgcaactgttcagaccttagttga |
155 |
Q |
| |
|
||||||||||| || |||| ||| |||| ||| |||||||||||||| ||||||| ||||| ||||||||| ||||||||||||||||||||||||| |
|
|
| T |
50545 |
atttcatactagttggtttgttttaacaatatccctagaagatggctgcagctatgattggaggagcttttctcactgcaactgttcagaccttagttga |
50446 |
T |
|
| Q |
156 |
gaaacttgcttcaactgagtttcgtgattacatcaaaaacactaagctcaatgtctcactcttgaggcagttacaagcaaccatgctcaatcttcaggct |
255 |
Q |
| |
|
||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| | || |||| | |||| |||||| | | |
|
|
| T |
50445 |
gaaacttgcttcaacagagtttcttgattacatcaaaaacactaagctcaatgtctcactcttgaggcagctgaaaacaacacttctcactcttcaagtt |
50346 |
T |
|
| Q |
256 |
gttctagatgatgcagaggagaagcagatcagcaatccccatgtcaaacagtggcttgataacttgaaagatgttgtctttgatgctgaggatttgctca |
355 |
Q |
| |
|
|| || |||||||| |||||||||||||||| |||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
50345 |
gtgctggatgatgctgaggagaagcagatcaacaatcctgctgtcaaactatggcttgatgacttgaaagatgctgtctttgatgctgaggacttgctca |
50246 |
T |
|
| Q |
356 |
acgaaatcagttacgattccctgcgatgcaaggtggagaatgcaaaagctcaaaacaaaactaatcaggtgtggaacttcctttc |
440 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| | |||||||| ||||||| |||| |
|
|
| T |
50245 |
gcgaaatcagttatgattccctgcgatgcaaggtggagaatgcaaaagctcaaagcaaaatttatcaggtgatgaacttcttttc |
50161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 202; Significance: 1e-110; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 79 - 440
Target Start/End: Original strand, 26906249 - 26906610
Alignment:
| Q |
79 |
ttacaagatcaacagaagatggctgcaactatgataggaggcgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttc |
178 |
Q |
| |
|
||||||| |||| |||||||||||||| |||||||||||| |||||||||||||||| ||||||||| |||||||||||||||| |||||| |||||| |
|
|
| T |
26906249 |
ttacaagttcaatagaagatggctgcagctatgataggagaagcttttctctctgcaattgttcagactttagttgagaaacttgtttcaacacagtttc |
26906348 |
T |
|
| Q |
179 |
gtgattacatcaaaaacactaagctcaatgtctcactcttgaggcagttacaagcaaccatgctcaatcttcaggctgttctagatgatgcagaggagaa |
278 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||| || || |||| |||||| ||| |||| ||| || ||||||||||||||||| |
|
|
| T |
26906349 |
ttgattacatcaaaaacaccaagctcaatgtctcactcttgaggcagctaaaaacaacactgctcactctgcaggttgtgctggatgatgcagaggagaa |
26906448 |
T |
|
| Q |
279 |
gcagatcagcaatccccatgtcaaacagtggcttgataacttgaaagatgttgtctttgatgctgaggatttgctcaacgaaatcagttacgattccctg |
378 |
Q |
| |
|
||||||| |||||| ||||||||| ||||||||| |||||||||||| | ||||||||| |||||| |||||||||||||| ||||| ||||||||| |
|
|
| T |
26906449 |
acagatcaacaatcctgctgtcaaacaatggcttgatgacttgaaagatgctatctttgatgttgaggacttgctcaacgaaattagttatgattccctg |
26906548 |
T |
|
| Q |
379 |
cgatgcaaggtggagaatgcaaaagctcaaaacaaaactaatcaggtgtggaacttcctttc |
440 |
Q |
| |
|
|||||||| || |||||| || ||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
26906549 |
cgatgcaaagtcgagaatacacaagctcaaaacaaaactaatcaggtgttgaacttcctttc |
26906610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 110 - 223
Target Start/End: Complemental strand, 3438623 - 3438506
Alignment:
| Q |
110 |
tgataggaggcgcttttctctctgcaactgttcagacctta----gttgagaaacttgcttcaactgagtttcgtgattacatcaaaaacactaagctca |
205 |
Q |
| |
|
||||| |||| |||||||||| ||||| | ||||||||||| |||||||||||||||||| | || |||| ||||||||||||||| || ||| | | |
|
|
| T |
3438623 |
tgataagaggagcttttctctatgcaatttttcagaccttaattagttgagaaacttgcttcatcggattttcttgattacatcaaaaataccaagttaa |
3438524 |
T |
|
| Q |
206 |
atgtctcactcttgaggc |
223 |
Q |
| |
|
|| ||||||| ||||||| |
|
|
| T |
3438523 |
atatctcacttttgaggc |
3438506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 99; Significance: 1e-48; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 92 - 218
Target Start/End: Complemental strand, 44958382 - 44958256
Alignment:
| Q |
92 |
agaagatggctgcaactatgataggaggcgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcgtgattacatcaa |
191 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||| |
|
|
| T |
44958382 |
agaagatggctgcaactatgataggaggagcttttctatctgcaactgttcaaaccttagttgagaaacttgcttcaacagagtttcttgattacatcaa |
44958283 |
T |
|
| Q |
192 |
aaacactaagctcaatgtctcactctt |
218 |
Q |
| |
|
|||||| ||| |||||||||||||||| |
|
|
| T |
44958282 |
aaacaccaagatcaatgtctcactctt |
44958256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 241 - 440
Target Start/End: Complemental strand, 44958264 - 44958065
Alignment:
| Q |
241 |
ctcaatcttcaggctgttctagatgatgcagaggagaagcagatcagcaatccccatgtcaaacagtggcttgataacttgaaagatgttgtctttgatg |
340 |
Q |
| |
|
|||| |||||||| ||| || |||||||||||||||||||| |||| ||| | ||||||||| ||||||||| |||||||| || | ||||||| |
|
|
| T |
44958264 |
ctcactcttcaggttgtgcttgatgatgcagaggagaagcaaatcaccaaccttactgtcaaacaatggcttgatgacttgaaaaatacaatatttgatg |
44958165 |
T |
|
| Q |
341 |
ctgaggatttgctcaacgaaatcagttacgattccctgcgatgcaaggtggagaatgcaaaagctcaaaacaaaactaatcaggtgtggaacttcctttc |
440 |
Q |
| |
|
| ||||||||||||||| |||| || || ||||||||||| ||||| ||||||||| || ||| | ||||||||||||||||| |||||||||||||| |
|
|
| T |
44958164 |
ccgaggatttgctcaaccaaattagctatgattccctgcgttgcaaagtggagaatacacaagttgccaacaaaactaatcaggtctggaacttcctttc |
44958065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 262 - 395
Target Start/End: Original strand, 11484552 - 11484685
Alignment:
| Q |
262 |
gatgatgcagaggagaagcagatcagcaatccccatgtcaaacagtggcttgataacttgaaagatgttgtctttgatgctgaggatttgctcaacgaaa |
361 |
Q |
| |
|
||||||||||| |||||||||||| | ||| | ||||||| ||||||||| |||||||||| |||||||||||||||||||||| || |||| |
|
|
| T |
11484552 |
gatgatgcagaagagaagcagatccttcaacccaaaatcaaacaatggcttgatcggttgaaagatgcaatctttgatgctgaggatttgcttaatgaaa |
11484651 |
T |
|
| Q |
362 |
tcagttacgattccctgcgatgcaaggtggagaa |
395 |
Q |
| |
|
|||| || ||| || ||||||||||||| ||||| |
|
|
| T |
11484652 |
tcagctatgatgccttgcgatgcaaggtagagaa |
11484685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 89; Significance: 1e-42; HSPs: 2)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 92 - 432
Target Start/End: Complemental strand, 136592 - 136252
Alignment:
| Q |
92 |
agaagatggctgcaactatgataggaggcgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcgtgattacatcaa |
191 |
Q |
| |
|
||||||||||||||||| || | ||||| |||||||||||||| ||||||||||| ||||||||||||||||||||| |||||| |||||||||||| |
|
|
| T |
136592 |
agaagatggctgcaactttggtgggaggggcttttctctctgctactgttcagactttagttgagaaacttgcttcacaagagttttgtgattacatcag |
136493 |
T |
|
| Q |
192 |
aaacactaagctcaatgtctcactcttgaggcagttacaagcaaccatgctcaatcttcaggctgttctagatgatgcagaggagaagcagatcagcaat |
291 |
Q |
| |
|
|||||| ||||| ||| |||||| ||| |||| || |||| ||||| ||||||||| ||||| ||||||||||| ||||||| |||| ||| |
|
|
| T |
136492 |
aaacaccaagctgaattcctcactgttggcagagttggaaacaacactgctcgctcttcaggcggttcttgatgatgcagaacagaagcaaatcaccaac |
136393 |
T |
|
| Q |
292 |
ccccatgtcaaacagtggcttgataacttgaaagatgttgtctttgatgctgaggatttgctcaacgaaatcagttacgattccctgcgatgcaaggtgg |
391 |
Q |
| |
|
| ||||||||| ||| | ||| | ||||||||| ||| |||||||||||||||||| ||| |||||| |||||| ||||| ||||| ||||||| |
|
|
| T |
136392 |
actgctgtcaaacaatggatggatcaactgaaagatgcaatctatgatgctgaggatttgcttaaccaaatcaattacgactccctccgatgtaaggtgg |
136293 |
T |
|
| Q |
392 |
agaatgcaaaagctcaaaacaaaactaatcaggtgtggaac |
432 |
Q |
| |
|
|||| | || || |||||| ||||||||||| |||||| |
|
|
| T |
136292 |
agaagatacaatctgaaaacatgactaatcaggtttggaac |
136252 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 92 - 432
Target Start/End: Complemental strand, 146643 - 146303
Alignment:
| Q |
92 |
agaagatggctgcaactatgataggaggcgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcgtgattacatcaa |
191 |
Q |
| |
|
||||||||||||||||| || | ||||| |||||||||||||| ||||||||||| ||||||| ||||||||||||| |||||| |||||||||||| |
|
|
| T |
146643 |
agaagatggctgcaactttggtgggaggggcttttctctctgctactgttcagactttagttgcgaaacttgcttcacaagagttttgtgattacatcag |
146544 |
T |
|
| Q |
192 |
aaacactaagctcaatgtctcactcttgaggcagttacaagcaaccatgctcaatcttcaggctgttctagatgatgcagaggagaagcagatcagcaat |
291 |
Q |
| |
|
|||||| ||||| ||| |||||| ||| |||| || |||| ||||| |||||||| || || ||||||||||| |||||| |||| ||| |
|
|
| T |
146543 |
aaacaccaagctgaattcctcactgttggcagagttggaaacaacactgctcgctcttcaggtggtgctggatgatgcagaactgaagcaaatcaccaac |
146444 |
T |
|
| Q |
292 |
ccccatgtcaaacagtggcttgataacttgaaagatgttgtctttgatgctgaggatttgctcaacgaaatcagttacgattccctgcgatgcaaggtgg |
391 |
Q |
| |
|
| ||||||||| ||| | ||| | ||||||||| ||| |||||||||||||||||| ||| |||||| |||||| ||||||||||| | ||||| |
|
|
| T |
146443 |
actgctgtcaaacaatggatggatcaactgaaagatgcaatctatgatgctgaggatttgcttaaccaaatcaattacgactccctgcgatgtacggtgg |
146344 |
T |
|
| Q |
392 |
agaatgcaaaagctcaaaacaaaactaatcaggtgtggaac |
432 |
Q |
| |
|
|||| | ||||| |||||| ||||||||||| |||||| |
|
|
| T |
146343 |
agaagaaacaagctgaaaacatgactaatcaggtttggaac |
146303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 241 - 396
Target Start/End: Complemental strand, 31680294 - 31680139
Alignment:
| Q |
241 |
ctcaatcttcaggctgttctagatgatgcagaggagaagcagatcagcaatccccatgtcaaacagtggcttgataacttgaaagatgttgtctttgatg |
340 |
Q |
| |
|
|||| |||||| |||||||| |||||||| ||| |||||||||||| ||||| | ||||||||| ||||||||| | |||||||||| | | ||||| |
|
|
| T |
31680294 |
ctcactcttcatgctgttcttgatgatgctgagaagaagcagatcaacaatcttcctgtcaaacaatggcttgatgagttgaaagatgcaatatatgatg |
31680195 |
T |
|
| Q |
341 |
ctgaggatttgctcaacgaaatcagttacgattccctgcgatgcaaggtggagaat |
396 |
Q |
| |
|
||||||||||||||||| | |||||||| |||| ||| || |||||||||||||| |
|
|
| T |
31680194 |
ctgaggatttgctcaaccagatcagttatgattgccttagaagcaaggtggagaat |
31680139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 19956982 - 19957058
Alignment:
| Q |
92 |
agaagatggctgcaactatgataggaggcgcttttctctctgcaa-ctgttcagaccttagttgagaaacttgcttc |
167 |
Q |
| |
|
||||||||| |||||||||||||||||| ||||||||||| |||| || |||| ||||||||||||||||||||||| |
|
|
| T |
19956982 |
agaagatggttgcaactatgataggaggagcttttctctcagcaacctattcaaaccttagttgagaaacttgcttc |
19957058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University