View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8581_low_34 (Length: 327)

Name: NF8581_low_34
Description: NF8581
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8581_low_34
NF8581_low_34
[»] chr8 (1 HSPs)
chr8 (18-312)||(37167799-37168093)


Alignment Details
Target: chr8 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 18 - 312
Target Start/End: Original strand, 37167799 - 37168093
Alignment:
Q  18 aagaagatactgaaacaatgtagaagtgtagaacaatttgggaacatacggcgtggacattgtattattatggtaccgaggaggaggaactgagattccc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37167799 aagaagatactgaaacaatgtagaagtgtagaacaatttgggaacatacggcgtggacattgtattattatggtaccgaggaggaggaactgagattccc 37167898  T
Q  118 acatgaannnnnnnatatatgtgttgtcttgatgcagttgttacgttaattaattgtttttattgatgaattttcattattgtttcatgtattaaattaa 217  Q
    |||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37167899 acatgaatttttttatatatgtgttgtcttgatgcagttgttacgttaattaattgtttttattgatgaattttcattattgtttcatgtattaaattaa 37167998  T
Q  218 cttataatctaatctaaatacgtaaagaacatgaaagaaattaagatgctgcttttgttatctagtttattgttttaagttggtagcatgatgtc 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37167999 cttataatctaatctaaatacgtaaagaacatgaaagaaattaagatgctgcttttgttatctagtttattgttttaagttggtagcatgatgtc 37168093  T

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