View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8581_low_46 (Length: 249)
Name: NF8581_low_46
Description: NF8581
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8581_low_46 |
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Alignment Details
Target: chr7 (Bit Score: 139; Significance: 8e-73; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 66 - 240
Target Start/End: Original strand, 44881975 - 44882140
Alignment:
| Q |
66 |
gtgtactctgtggctatagatcaaggattgttgtggttttctttttcgtttaaggttttgaaaaaagaactcaaagcacggataaaagattaaaaccata |
165 |
Q |
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| T |
44881975 |
gtgtactctgtggctatagatcaaggattgttgtggttttctttatcgtttaaggttttgaaaaaagaactcaaagcacggataaaagattaaaaccata |
44882074 |
T |
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| Q |
166 |
ctcatccagtctgatgtcgattcacgattatagaataaaaataagtaaatttaaacatccaaaagagagtataat |
240 |
Q |
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| T |
44882075 |
ctca---------atgtcgattcacgattatagaataaaaataagtaaatttaaacatccaaaagagagtataat |
44882140 |
T |
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