View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8583_low_8 (Length: 309)

Name: NF8583_low_8
Description: NF8583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8583_low_8
NF8583_low_8
[»] chr3 (56 HSPs)
chr3 (1-299)||(14349107-14349404)
chr3 (110-299)||(17387122-17387312)
chr3 (110-299)||(3246176-3246366)
chr3 (110-299)||(1992083-1992271)
chr3 (110-299)||(13600354-13600545)
chr3 (110-238)||(4370053-4370183)
chr3 (113-238)||(20157338-20157464)
chr3 (110-299)||(12777180-12777372)
chr3 (110-299)||(3339871-3340061)
chr3 (110-238)||(13089530-13089660)
chr3 (110-261)||(13136873-13137027)
chr3 (110-299)||(14446409-14446599)
chr3 (226-299)||(3278733-3278806)
chr3 (110-238)||(7599718-7599849)
chr3 (110-238)||(9361690-9361821)
chr3 (110-238)||(10603193-10603324)
chr3 (110-238)||(12187796-12187927)
chr3 (110-238)||(12194210-12194341)
chr3 (119-238)||(11946787-11946909)
chr3 (110-238)||(13097061-13097191)
chr3 (110-299)||(13690020-13690211)
chr3 (111-299)||(15629630-15629822)
chr3 (110-238)||(6814232-6814363)
chr3 (110-238)||(10146375-10146506)
chr3 (110-299)||(13064324-13064514)
chr3 (110-299)||(13196105-13196295)
chr3 (110-299)||(13694265-13694456)
chr3 (110-299)||(15945989-15946182)
chr3 (110-299)||(20560385-20560578)
chr3 (110-299)||(20562693-20562886)
chr3 (110-238)||(22165031-22165163)
chr3 (110-236)||(37941742-37941871)
chr3 (119-193)||(13505274-13505350)
chr3 (119-193)||(16449500-16449576)
chr3 (110-238)||(10160893-10161024)
chr3 (122-238)||(13188138-13188257)
chr3 (122-299)||(20565013-20565194)
chr3 (110-238)||(16374198-16374329)
chr3 (119-238)||(15644461-15644583)
chr3 (122-193)||(16655105-16655178)
chr3 (3-97)||(46226887-46226981)
chr3 (224-299)||(12390323-12390398)
chr3 (113-299)||(8686995-8687180)
chr3 (129-238)||(15557663-15557775)
chr3 (121-299)||(10547532-10547712)
chr3 (110-174)||(12160981-12161045)
chr3 (224-299)||(16702708-16702783)
chr3 (47-97)||(25154378-25154428)
chr3 (63-97)||(4474267-4474301)
chr3 (63-97)||(44436471-44436505)
chr3 (63-97)||(54719073-54719107)
chr3 (122-171)||(12390449-12390498)
chr3 (47-96)||(28944164-28944213)
chr3 (63-96)||(51315577-51315610)
chr3 (122-174)||(11866170-11866222)
chr3 (62-94)||(25248887-25248919)
[»] chr6 (38 HSPs)
chr6 (126-299)||(25962222-25962395)
chr6 (126-299)||(25966869-25967042)
chr6 (110-299)||(30672388-30672577)
chr6 (126-299)||(25962702-25962875)
chr6 (126-299)||(25967349-25967522)
chr6 (162-299)||(19586206-19586343)
chr6 (110-299)||(18447579-18447770)
chr6 (110-238)||(25632070-25632199)
chr6 (110-238)||(22062226-22062357)
chr6 (110-238)||(18011231-18011359)
chr6 (110-238)||(18853378-18853507)
chr6 (110-238)||(25625131-25625260)
chr6 (110-238)||(22166270-22166401)
chr6 (110-238)||(22243176-22243307)
chr6 (119-238)||(15698928-15699050)
chr6 (110-238)||(29595066-29595196)
chr6 (110-299)||(8724373-8724564)
chr6 (110-238)||(20169606-20169737)
chr6 (110-299)||(21561087-21561278)
chr6 (119-238)||(24855965-24856087)
chr6 (110-238)||(22767836-22767967)
chr6 (110-299)||(23518417-23518603)
chr6 (110-193)||(15850748-15850834)
chr6 (119-238)||(20016949-20017071)
chr6 (126-191)||(18188351-18188417)
chr6 (47-97)||(33401252-33401302)
chr6 (126-261)||(11219000-11219135)
chr6 (47-97)||(10727257-10727307)
chr6 (224-299)||(29685978-29686055)
chr6 (110-254)||(18978057-18978200)
chr6 (47-94)||(12766415-12766462)
chr6 (47-93)||(28011327-28011373)
chr6 (48-97)||(2840857-2840906)
chr6 (47-87)||(266188-266228)
chr6 (47-95)||(1377407-1377455)
chr6 (47-95)||(1385155-1385203)
chr6 (47-87)||(2853494-2853534)
chr6 (224-264)||(24389575-24389615)
[»] chr5 (37 HSPs)
chr5 (110-249)||(20574822-20574961)
chr5 (110-299)||(22947800-22947989)
chr5 (110-238)||(24219196-24219325)
chr5 (110-299)||(25007447-25007640)
chr5 (110-299)||(18484855-18485045)
chr5 (110-238)||(23601365-23601495)
chr5 (110-238)||(15734897-15735028)
chr5 (110-299)||(20445489-20445681)
chr5 (110-238)||(20596550-20596681)
chr5 (110-238)||(20602836-20602967)
chr5 (110-238)||(20609127-20609258)
chr5 (110-238)||(20791437-20791568)
chr5 (110-238)||(24939891-24940022)
chr5 (110-299)||(22854938-22855128)
chr5 (119-238)||(23711398-23711520)
chr5 (119-238)||(21281640-21281760)
chr5 (110-299)||(22318161-22318350)
chr5 (119-238)||(23747422-23747544)
chr5 (110-299)||(30760296-30760486)
chr5 (110-299)||(26847031-26847224)
chr5 (119-236)||(20621534-20621654)
chr5 (119-238)||(24953894-24954016)
chr5 (110-238)||(18072263-18072394)
chr5 (110-299)||(25116811-25117001)
chr5 (110-299)||(25175902-25176092)
chr5 (110-190)||(20439084-20439163)
chr5 (47-97)||(24405694-24405744)
chr5 (48-97)||(30603680-30603729)
chr5 (62-97)||(21066537-21066572)
chr5 (47-94)||(28446204-28446251)
chr5 (47-97)||(3333758-3333808)
chr5 (63-97)||(6130337-6130371)
chr5 (63-97)||(19340843-19340877)
chr5 (63-97)||(32391801-32391835)
chr5 (63-97)||(36798373-36798407)
chr5 (63-97)||(40276101-40276135)
chr5 (1-38)||(3999104-3999141)
[»] scaffold0059 (1 HSPs)
scaffold0059 (110-299)||(11753-11943)
[»] scaffold0013 (1 HSPs)
scaffold0013 (110-299)||(233455-233645)
[»] chr4 (27 HSPs)
chr4 (113-299)||(17485563-17485750)
chr4 (110-238)||(18291377-18291506)
chr4 (110-238)||(15348537-15348666)
chr4 (110-238)||(10630109-10630239)
chr4 (110-238)||(45234952-45235082)
chr4 (113-299)||(15864870-15865057)
chr4 (110-299)||(14686436-14686626)
chr4 (110-238)||(11497335-11497466)
chr4 (110-238)||(13822277-13822408)
chr4 (109-238)||(38426105-38426235)
chr4 (110-238)||(3354013-3354142)
chr4 (110-238)||(18082181-18082310)
chr4 (119-238)||(42710454-42710576)
chr4 (110-299)||(15260752-15260945)
chr4 (110-238)||(15253710-15253842)
chr4 (110-299)||(10649769-10649959)
chr4 (119-238)||(22110331-22110453)
chr4 (224-299)||(12514518-12514593)
chr4 (47-97)||(14449340-14449390)
chr4 (216-299)||(15444233-15444317)
chr4 (1-94)||(53924765-53924860)
chr4 (63-97)||(2654037-2654071)
chr4 (51-97)||(3658122-3658168)
chr4 (47-97)||(21871447-21871496)
chr4 (47-97)||(21927308-21927357)
chr4 (63-97)||(43074671-43074705)
chr4 (1-38)||(35383783-35383820)
[»] scaffold0328 (1 HSPs)
scaffold0328 (110-299)||(903-1092)
[»] scaffold0278 (2 HSPs)
scaffold0278 (110-249)||(13760-13899)
scaffold0278 (110-249)||(17094-17233)
[»] scaffold0117 (2 HSPs)
scaffold0117 (112-249)||(32263-32401)
scaffold0117 (113-299)||(45869-46057)
[»] chr2 (39 HSPs)
chr2 (110-299)||(25371621-25371811)
chr2 (110-249)||(24501456-24501596)
chr2 (110-299)||(27630876-27631069)
chr2 (110-299)||(24170692-24170882)
chr2 (110-238)||(25145486-25145616)
chr2 (110-208)||(25368435-25368533)
chr2 (110-299)||(25366415-25366608)
chr2 (113-299)||(23160029-23160219)
chr2 (113-299)||(23571286-23571476)
chr2 (110-238)||(22045381-22045512)
chr2 (110-238)||(25356874-25357005)
chr2 (110-299)||(23647295-23647485)
chr2 (110-299)||(26192284-26192474)
chr2 (119-193)||(22664459-22664535)
chr2 (110-230)||(24820750-24820871)
chr2 (110-238)||(12337-12467)
chr2 (110-238)||(17589771-17589902)
chr2 (110-238)||(24796005-24796136)
chr2 (119-238)||(116915-117037)
chr2 (119-238)||(16775023-16775145)
chr2 (110-299)||(27769460-27769653)
chr2 (224-299)||(19806284-19806359)
chr2 (1-97)||(34679290-34679386)
chr2 (224-299)||(24019726-24019801)
chr2 (110-238)||(24517042-24517172)
chr2 (113-299)||(25338773-25338958)
chr2 (110-299)||(24320549-24320737)
chr2 (224-299)||(29955310-29955385)
chr2 (230-299)||(25583362-25583430)
chr2 (119-193)||(27626958-27627034)
chr2 (207-299)||(15532272-15532364)
chr2 (47-94)||(6592934-6592981)
chr2 (1-97)||(15023036-15023134)
chr2 (51-94)||(44617802-44617845)
chr2 (63-97)||(6510197-6510231)
chr2 (47-93)||(35718857-35718903)
chr2 (47-97)||(37431735-37431785)
chr2 (1-38)||(14943554-14943591)
chr2 (47-95)||(44297628-44297676)
[»] chr1 (16 HSPs)
chr1 (110-299)||(8652408-8652598)
chr1 (110-299)||(19876335-19876525)
chr1 (110-299)||(8948219-8948409)
chr1 (110-299)||(21785116-21785306)
chr1 (113-299)||(3989461-3989650)
chr1 (119-238)||(27046246-27046368)
chr1 (110-238)||(20236830-20236961)
chr1 (110-299)||(52939277-52939468)
chr1 (110-238)||(21799384-21799515)
chr1 (110-238)||(17095322-17095454)
chr1 (4-97)||(23891681-23891776)
chr1 (224-299)||(16383188-16383263)
chr1 (48-97)||(45739133-45739182)
chr1 (62-93)||(44436949-44436980)
chr1 (47-97)||(17760887-17760937)
chr1 (1-38)||(42924346-42924383)
[»] chr7 (40 HSPs)
chr7 (110-245)||(4312101-4312236)
chr7 (110-299)||(48802514-48802705)
chr7 (110-299)||(8782659-8782849)
chr7 (110-299)||(20107653-20107844)
chr7 (110-299)||(18286982-18287175)
chr7 (110-261)||(4792116-4792267)
chr7 (110-238)||(23514430-23514561)
chr7 (110-299)||(5396494-5396684)
chr7 (110-299)||(13657286-13657477)
chr7 (119-238)||(16150203-16150325)
chr7 (110-235)||(10432468-10432594)
chr7 (110-238)||(8717228-8717359)
chr7 (110-238)||(14550459-14550590)
chr7 (110-299)||(825004-825194)
chr7 (110-236)||(13355599-13355726)
chr7 (110-299)||(16326428-16326618)
chr7 (109-299)||(15207228-15207419)
chr7 (119-238)||(13673228-13673350)
chr7 (119-238)||(18593987-18594109)
chr7 (119-238)||(18617575-18617697)
chr7 (110-261)||(15065150-15065304)
chr7 (110-236)||(12566381-12566502)
chr7 (110-248)||(14222413-14222554)
chr7 (110-174)||(539547-539611)
chr7 (110-261)||(15917464-15917615)
chr7 (110-248)||(27290714-27290855)
chr7 (119-174)||(9582285-9582340)
chr7 (48-94)||(17876358-17876404)
chr7 (110-173)||(11927698-11927761)
chr7 (3-97)||(35250317-35250411)
chr7 (122-171)||(6713743-6713792)
chr7 (1-97)||(20185114-20185211)
chr7 (224-296)||(6713618-6713690)
chr7 (224-299)||(4326735-4326810)
chr7 (47-94)||(15107059-15107106)
chr7 (110-173)||(16466405-16466468)
chr7 (47-94)||(36903471-36903518)
chr7 (63-97)||(28472576-28472610)
chr7 (47-87)||(23746096-23746136)
chr7 (47-87)||(36580340-36580380)
[»] scaffold0402 (1 HSPs)
scaffold0402 (110-249)||(7158-7298)
[»] scaffold0216 (1 HSPs)
scaffold0216 (110-299)||(10781-10971)
[»] scaffold0220 (1 HSPs)
scaffold0220 (110-238)||(9043-9172)
[»] scaffold0035 (1 HSPs)
scaffold0035 (110-299)||(51152-51344)
[»] chr8 (27 HSPs)
chr8 (110-299)||(22101773-22101966)
chr8 (110-299)||(22369323-22369513)
chr8 (110-238)||(21099512-21099643)
chr8 (110-238)||(21381455-21381586)
chr8 (110-238)||(21955437-21955568)
chr8 (110-299)||(20001679-20001869)
chr8 (110-299)||(22100299-22100492)
chr8 (110-238)||(17620104-17620234)
chr8 (110-299)||(19766909-19767099)
chr8 (110-238)||(20039710-20039840)
chr8 (165-275)||(20375207-20375318)
chr8 (110-295)||(22034203-22034392)
chr8 (110-238)||(21854501-21854631)
chr8 (110-238)||(8313830-8313961)
chr8 (113-299)||(11347603-11347790)
chr8 (110-193)||(8323615-8323700)
chr8 (110-299)||(21830395-21830588)
chr8 (119-238)||(23910812-23910935)
chr8 (110-238)||(20711830-20711960)
chr8 (138-261)||(23674939-23675062)
chr8 (110-174)||(16419397-16419461)
chr8 (1-97)||(35213049-35213145)
chr8 (110-299)||(21942100-21942291)
chr8 (224-300)||(22903925-22904001)
chr8 (63-97)||(17070989-17071023)
chr8 (63-97)||(17577249-17577283)
chr8 (47-97)||(30539055-30539105)
[»] scaffold0566 (1 HSPs)
scaffold0566 (110-299)||(1978-2168)
[»] scaffold0375 (1 HSPs)
scaffold0375 (122-299)||(11908-12086)
[»] scaffold0004 (2 HSPs)
scaffold0004 (110-236)||(252593-252720)
scaffold0004 (110-162)||(355294-355346)
[»] scaffold0011 (2 HSPs)
scaffold0011 (110-299)||(161206-161397)
scaffold0011 (110-171)||(171532-171593)
[»] scaffold0020 (2 HSPs)
scaffold0020 (110-238)||(116010-116139)
scaffold0020 (110-238)||(120314-120443)
[»] scaffold0230 (1 HSPs)
scaffold0230 (110-238)||(12849-12980)
[»] scaffold0679 (1 HSPs)
scaffold0679 (110-238)||(7374-7504)
[»] scaffold0656 (1 HSPs)
scaffold0656 (122-299)||(3180-3358)
[»] scaffold0206 (1 HSPs)
scaffold0206 (110-238)||(17266-17396)
[»] scaffold0156 (1 HSPs)
scaffold0156 (110-299)||(205-396)
[»] scaffold0029 (1 HSPs)
scaffold0029 (119-238)||(122741-122863)
[»] scaffold0018 (1 HSPs)
scaffold0018 (110-230)||(18916-19037)
[»] scaffold0861 (1 HSPs)
scaffold0861 (113-299)||(142-329)
[»] scaffold1225 (1 HSPs)
scaffold1225 (110-299)||(973-1166)
[»] scaffold0404 (1 HSPs)
scaffold0404 (119-238)||(411-533)
[»] scaffold0384 (1 HSPs)
scaffold0384 (110-299)||(9941-10131)
[»] scaffold0258 (1 HSPs)
scaffold0258 (110-299)||(22801-22991)
[»] scaffold0078 (1 HSPs)
scaffold0078 (122-299)||(29880-30058)
[»] scaffold0012 (1 HSPs)
scaffold0012 (110-238)||(12166-12294)
[»] scaffold0374 (1 HSPs)
scaffold0374 (110-189)||(9557-9637)
[»] scaffold0346 (1 HSPs)
scaffold0346 (110-238)||(4332-4462)
[»] scaffold0577 (1 HSPs)
scaffold0577 (110-188)||(5963-6040)
[»] scaffold0162 (1 HSPs)
scaffold0162 (110-236)||(35826-35955)
[»] scaffold0037 (2 HSPs)
scaffold0037 (110-189)||(44813-44894)
scaffold0037 (110-189)||(52202-52283)
[»] scaffold0026 (1 HSPs)
scaffold0026 (110-237)||(10515-10644)
[»] scaffold0322 (1 HSPs)
scaffold0322 (110-190)||(8106-8185)
[»] scaffold1941 (1 HSPs)
scaffold1941 (110-238)||(960-1090)
[»] scaffold0506 (1 HSPs)
scaffold0506 (110-299)||(2943-3134)
[»] scaffold0974 (1 HSPs)
scaffold0974 (110-174)||(476-540)
[»] scaffold0157 (1 HSPs)
scaffold0157 (224-299)||(6318-6393)
[»] scaffold0146 (1 HSPs)
scaffold0146 (110-190)||(22237-22319)
[»] scaffold0116 (1 HSPs)
scaffold0116 (122-299)||(38388-38566)
[»] scaffold0022 (1 HSPs)
scaffold0022 (119-174)||(24958-25013)
[»] scaffold0034 (1 HSPs)
scaffold0034 (110-174)||(59408-59472)
[»] scaffold0417 (1 HSPs)
scaffold0417 (63-96)||(9534-9567)
[»] scaffold0473 (1 HSPs)
scaffold0473 (122-190)||(13409-13476)
[»] scaffold0848 (1 HSPs)
scaffold0848 (224-299)||(1442-1517)
[»] scaffold0735 (1 HSPs)
scaffold0735 (1-38)||(6078-6115)


Alignment Details
Target: chr3 (Bit Score: 186; Significance: 1e-101; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 14349404 - 14349107
Alignment:
Q  1 gccccctaaccttcacgaagttgtgattttgaccccctnnnnnnnnctacaaaactgtccattaagttttgcaactgtagcagttttagccccccaactg 100  Q
    |||||||||| || ||||||||| |||||| |||||||        ||||||||||| |  |||||||||||||||||| ||||||| |||||||||||     
T  14349404 gccccctaacttttacgaagttgcgattttaaccccctaaaaaaa-ctacaaaactgcctcttaagttttgcaactgtaacagttttggccccccaacta 14349306  T
Q  101 taacattttatgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaacatgagtta 200  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||     
T  14349305 taatattttatgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgaaaaaagcatgagttg 14349206  T
Q  201 catcccttaagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    |||||||| |||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||| | |||||||||||||| |||||||||||||    
T  14349205 catcccttgagcaattgtatggatatgtattttaaggcgcacgctctaactctaaaggtaaattaaccctaaaaaattttcagagaaaaaatagtataa 14349107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 110 - 299
Target Start/End: Original strand, 17387122 - 17387312
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaacatgagttacatccctta 209  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||  |||| |||||||||    
T  17387122 atgaaagtgaactcttgtgttttaagttttcttgatatacccacatcttgtattattgtgaataattctccaatgagaaaagcacaagttgcatccctta 17387221  T
Q  210 agcaattgtatggataggtattttaag-gagcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    ||||| |||||| ||||||||||||||  |||||||||||| | ||  ||||  |||||||| |||| | || ||||||||| ||||||||    
T  17387222 agcaagtgtatgaataggtattttaagaaagcacgttctaattttagtggtacgttaacctttaaaagtctttagagtaaaagtagtataa 17387312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 110 - 299
Target Start/End: Complemental strand, 3246366 - 3246176
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataa-ttctccaatgagaaaaacatgagttacatccctt 208  Q
    ||||||||||||||||||||||||||| |||||||||||||  ||||  |||||||||||||||| |||||||||||||||| ||  |||| || |||||    
T  3246366 atgaaagtgaactcttgtgttttaagttttcttgatatacctgcatcaagttttattgtgaataaattctccaatgagaaaagcactagttgcacccctt 3246267  T
Q  209 aagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     ||||| |||||| |||||||||||||||| | |||||| ||||| |||||||| ||||| ||||||| ||||||||||||| ||||||||    
T  3246266 gagcaagtgtatgaataggtattttaaggaactcgttctgactcttaaggtaaactaaccctcaaaaactttcagagtaaaagtagtataa 3246176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 110 - 299
Target Start/End: Original strand, 1992083 - 1992271
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaacatgagttacatccctta 209  Q
    |||||||||||||||||||||| | ||| ||||  |||||||||||||||||||||||||||||||||||||||||||||| ||  |||| ||||| ||     
T  1992083 atgaaagtgaactcttgtgttt-atgtactctttctatacccacatcttgttttattgtgaataattctccaatgagaaaatcacaagttgcatcctttg 1992181  T
Q  210 agcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    |||||||||||| ||||||||||||||||||||||||||| | ||  |||| ||||||| | |||| | || |||||||||  |||||||    
T  1992182 agcaattgtatgaataggtattttaaggagcacgttctaattttagtggtacattaacccttaaaagtctttagagtaaaagcagtataa 1992271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 110 - 299
Target Start/End: Original strand, 13600354 - 13600545
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat-aattctccaatgagaaaaaca-tgagttacatccct 207  Q
    ||||||||||  | || |||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||   |||| |||||||    
T  13600354 atgaaagtgattttttatgttttaagtgttcttgatatacccacatcttgttttattgtgaataaattctctaatgagaaaagcacaaagttgcatccct 13600453  T
Q  208 taagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    ||||||| |||||| ||||||||||||||||||||||| ||| | || ||||| ||||||| | |||| | || ||||||||| ||| ||||    
T  13600454 taagcaagtgtatgaataggtattttaaggagcacgttataattttagaggtacattaacccttaaaagtctttagagtaaaagtagcataa 13600545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 4370053 - 4370183
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat-aattctccaatgagaaaaaca-tgagttacatccct 207  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||  |||||| |||||||||||||||||||||   |||| | |||||    
T  4370053 atgaaagtaaactcttgtgttttaagttttcttgatatacccacatcttgttttaacgtgaataaattctccaatgagaaaaacacaaagttgcttccct 4370152  T
Q  208 taagcaattgtatggataggtattttaagga 238  Q
    | || || |||||| ||||||||||||||||    
T  4370153 tgagtaagtgtatgaataggtattttaagga 4370183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 113 - 238
Target Start/End: Complemental strand, 20157464 - 20157338
Alignment:
Q  113 aaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat-aattctccaatgagaaaaacatgagttacatcccttaag 211  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||| |||||||||||||||||| ||  |||| | |||||| ||    
T  20157464 aaagtgaactcttgtgttttaagttttcttgatatacctacatcttgttttaatgtgaataaattctccaatgagaaaagcacaagttgcttcccttgag 20157365  T
Q  212 caattgtatggataggtattttaagga 238  Q
     || |||||| ||||||| ||||||||    
T  20157364 taaatgtatgaataggtactttaagga 20157338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 110 - 299
Target Start/End: Complemental strand, 12777372 - 12777180
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat-aattctccaatgagaaaaaca-tgagttacatccct 207  Q
    |||||||| |||||||||| ||||||| ||||| |||||||||||||||||||||  |||||| |||||||||||||||||| ||   |||| ||  |||    
T  12777372 atgaaagtaaactcttgtgctttaagttttcttaatatacccacatcttgttttaaagtgaataaattctccaatgagaaaagcacctagttgcaatcct 12777273  T
Q  208 taagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaatt-aaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    | || || |||||| |||||||||||||||| |||||||||||| ||| ||||| ||  ||| | |||||| |||||||||||| || |||||    
T  12777272 tgagtaagtgtatgaataggtattttaaggaacacgttctaactttaatggtaacttggacccttaaaaatcttcagagtaaaagtattataa 12777180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 110 - 299
Target Start/End: Complemental strand, 3340061 - 3339871
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaaca-tgagttacatccctt 208  Q
    ||||||||||  ||||||||| ||||| |||||| ||||||||||||  ||||||||||||| |||||||||||||||||| ||   |||| ||  ||||    
T  3340061 atgaaagtgatttcttgtgttgtaagtgttcttgctatacccacatcaagttttattgtgaa-aattctccaatgagaaaagcacctagttgcaatcctt 3339963  T
Q  209 aagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaatt-aaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     || || |||||| |||||||||||||||| |||||||||||| ||| ||||| ||  ||| | |||||| |||||||||||| ||||||||    
T  3339962 gagtaagtgtatgaataggtattttaaggaacacgttctaactttaatggtaacttggacccttaaaaatcttcagagtaaaagtagtataa 3339871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 110 - 238
Target Start/End: Complemental strand, 13089660 - 13089530
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaacatgagttacatccct 207  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||| || |  ||||||  |||||||||||||||||||||  |||| | |||||    
T  13089660 atgaaagtgaactcttgtattttaagttttcttgatatacccacatcttgcttcaaagtgaatacaattctccaatgagaaaaacacaagttgcttccct 13089561  T
Q  208 taagcaattgtatggataggtattttaagga 238  Q
    | || || |||||| ||||||||||||||||    
T  13089560 tgagtaagtgtatgaataggtattttaagga 13089530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 110 - 261
Target Start/End: Complemental strand, 13137027 - 13136873
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaa--taattctccaatgagaaaaaca-tgagttacatccc 206  Q
    ||||||||||  ||||||||| |||||||||||| ||||||||||||  |||||||||||||  ||||||||||||||||||||||   |||| ||  ||    
T  13137027 atgaaagtgatttcttgtgttataagtattcttgctatacccacatcaagttttattgtgaaattaattctccaatgagaaaaacacctagttgcaatcc 13136928  T
Q  207 ttaagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaa 261  Q
    || || || |||||| |||||||||||||||| |||||||||||| ||| |||||    
T  13136927 ttgagtaagtgtatgaataggtattttaaggaacacgttctaactttaatggtaa 13136873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 110 - 299
Target Start/End: Complemental strand, 14446599 - 14446409
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaacatg-agttacatccctt 208  Q
    ||||||||||  ||||||||| ||||| |||||| ||||||||||||  ||||||||||||| ||||||||||||| |||| ||   |||| ||  ||||    
T  14446599 atgaaagtgatttcttgtgttgtaagtgttcttgctatacccacatcaagttttattgtgaa-aattctccaatgacaaaagcacctagttgcaatcctt 14446501  T
Q  209 aagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaatt-aaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     || || |||||| |||||||||||||||| |||||||||||| ||| ||||| || |||| | |||||| |||||||||||| ||||||||    
T  14446500 gagtaagtgtatgaataggtattttaaggaacacgttctaactttaatggtaacttgaacccttaaaaatcttcagagtaaaagtagtataa 14446409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 226 - 299
Target Start/End: Original strand, 3278733 - 3278806
Alignment:
Q  226 ggtattttaaggagcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||    
T  3278733 ggtattttaaggagcacgttctaactctaaaggtaaattaaccttaaaaaaatttcagagtaaaagtagtataa 3278806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 7599718 - 7599849
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatccc 206  Q
    |||||||  |||||||||||||||||| |||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||   |||| | ||||    
T  7599718 atgaaagcaaactcttgtgttttaagtcttcttgatatacccacatcttgttttaaagtgaataaaattctccaatgagaaaaacacaaagttgcttccc 7599817  T
Q  207 ttaagcaattgtatggataggtattttaagga 238  Q
    || || || |||||| ||||||||||||||||    
T  7599818 ttgagtaaatgtatgaataggtattttaagga 7599849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 238
Target Start/End: Complemental strand, 9361821 - 9361690
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatccc 206  Q
    |||||||  |||||||||||||||||| |||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||   |||| | ||||    
T  9361821 atgaaagcaaactcttgtgttttaagtcttcttgatatacccacatcttgttttaaagtgaataaaattctccaatgagaaaaacacaaagttgcttccc 9361722  T
Q  207 ttaagcaattgtatggataggtattttaagga 238  Q
    || || || |||||| ||||||||||||||||    
T  9361721 ttgagtaaatgtatgaataggtattttaagga 9361690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 238
Target Start/End: Complemental strand, 10603324 - 10603193
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatccc 206  Q
    |||||||  |||||||||||||||||| |||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||   |||| | ||||    
T  10603324 atgaaagcaaactcttgtgttttaagtcttcttgatatacccacatcttgttttaaagtgaataaaattctccaatgagaaaaacacaaagttgcttccc 10603225  T
Q  207 ttaagcaattgtatggataggtattttaagga 238  Q
    || || || |||||| ||||||||||||||||    
T  10603224 ttgagtaaatgtatgaataggtattttaagga 10603193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 238
Target Start/End: Complemental strand, 12187927 - 12187796
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatccc 206  Q
    |||||||  |||||||||||||||||| |||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||   |||| | ||||    
T  12187927 atgaaagcaaactcttgtgttttaagtcttcttgatatacccacatcttgttttaaagtgaataaaattctccaatgagaaaaacacaaagttgcttccc 12187828  T
Q  207 ttaagcaattgtatggataggtattttaagga 238  Q
    || || || |||||| ||||||||||||||||    
T  12187827 ttgagtaaatgtatgaataggtattttaagga 12187796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 238
Target Start/End: Complemental strand, 12194341 - 12194210
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatccc 206  Q
    |||||||  |||||||||||||||||| |||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||   |||| | ||||    
T  12194341 atgaaagcaaactcttgtgttttaagtcttcttgatatacccacatcttgttttaaagtgaataaaattctccaatgagaaaaacacaaagttgcttccc 12194242  T
Q  207 ttaagcaattgtatggataggtattttaagga 238  Q
    || || || |||||| ||||||||||||||||    
T  12194241 ttgagtaaatgtatgaataggtattttaagga 12194210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 119 - 238
Target Start/End: Original strand, 11946787 - 11946909
Alignment:
Q  119 aactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatcccttaagcaat 215  Q
    |||||||||||||||||| |||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||   |||| | |||||| || ||     
T  11946787 aactcttgtgttttaagtcttcttgatatacccacatcttgttttaaagtgaataaaattctccaatgagaaaaacacaaagttgcttcccttgagtaaa 11946886  T
Q  216 tgtatggataggtattttaagga 238  Q
    |||||| ||||||||||||||||    
T  11946887 tgtatgaataggtattttaagga 11946909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 13097061 - 13097191
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaacatgagttacatccct 207  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||| || |  ||||||  |||||||||||||||||||||  |||| | |||||    
T  13097061 atgaaagtgaactcttgtattttaagttttcttgatatacccacatcttgcttcaaagtgaatacaattctccaatgagaaaaacacaagttgcttccct 13097160  T
Q  208 taagcaattgtatggataggtattttaagga 238  Q
    | || || |||||| ||| ||||||||||||    
T  13097161 tgagtaagtgtatgaataagtattttaagga 13097191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 299
Target Start/End: Original strand, 13690020 - 13690211
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat-aattctccaatgagaaaaacatgagttacatccctt 208  Q
    |||||||||||||||||| |||| ||| ||||||||||||||||||||||||| |   ||||| ||||||||||||||||| |||  |||| | ||||||    
T  13690020 atgaaagtgaactcttgtatttttagttttcttgatatacccacatcttgtttcaaaatgaataaattctccaatgagaaatacacaagttgcttccctt 13690119  T
Q  209 aagcaattgtatg-gataggtattttaaggagcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     || || |||||| |  || |||||| |||| |||||||| | | | |||||||||||||| ||||||||  ||| ||||||| ||||||||    
T  13690120 gagtaaatgtatgagtaagatatttttaggaacacgttctgattattaaggtaaattaaccctcaaaaatcctcaaagtaaaagtagtataa 13690211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 111 - 299
Target Start/End: Complemental strand, 15629822 - 15629630
Alignment:
Q  111 tgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaa--taattctccaatgagaaaaaca--tgagttacatccc 206  Q
    |||||||||  ||||||||| |||||||||||| ||||||||||||   ||||||||||||  ||||||||||||||||||||||  || ||| ||  ||    
T  15629822 tgaaagtgatttcttgtgttataagtattcttgctatacccacatcaatttttattgtgaaattaattctccaatgagaaaaacacctg-gttgcaatcc 15629724  T
Q  207 ttaagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaa-attaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    || || || |||||| |||||||||||||||| |||||||||||| ||| |||||  |  ||| | |||||| |||||||||||| ||||||||    
T  15629723 ttgagtaagtgtatgaataggtattttaaggaacacgttctaactttaatggtaacctggacccttaaaaatcttcagagtaaaagtagtataa 15629630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 6814232 - 6814363
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatccc 206  Q
    |||||||  |||||||||||||||||| |||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||   |||| | ||||    
T  6814232 atgaaagcaaactcttgtgttttaagtcttcttgatatacccacatcttgttttaaagtgaataaaattctccaatgagaaaaacacaaagttgcttccc 6814331  T
Q  207 ttaagcaattgtatggataggtattttaagga 238  Q
    || || || |||||| || |||||||||||||    
T  6814332 ttgagtaaatgtatgaatgggtattttaagga 6814363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 10146375 - 10146506
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatccc 206  Q
    |||||||  |||||||||||||||||| ||||||||||| |||||||||||||||  ||||||  |||||||||||||||||||||   |||| | ||||    
T  10146375 atgaaagcaaactcttgtgttttaagtcttcttgatataaccacatcttgttttaaagtgaataaaattctccaatgagaaaaacacaaagttgcttccc 10146474  T
Q  207 ttaagcaattgtatggataggtattttaagga 238  Q
    || || || |||||| ||||||||||||||||    
T  10146475 ttgagtaaatgtatgaataggtattttaagga 10146506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 299
Target Start/End: Original strand, 13064324 - 13064514
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaaca-tgagttacatccctt 208  Q
    ||||||||||  ||||||||||||||| |||||| ||||||||||||  ||||||||||||| |||| ||||||||||||| ||   |||| ||  ||||    
T  13064324 atgaaagtgatttcttgtgttttaagttttcttgctatacccacatcaagttttattgtgaa-aattatccaatgagaaaagcacctagttgcaatcctt 13064422  T
Q  209 aagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaatt-aaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     || || ||||||  ||||||||||||||| |||||||||||| ||| ||||| ||  ||| | |||||| || ||||||||| ||||||||    
T  13064423 gagtaaatgtatgagtaggtattttaaggaacacgttctaactttaatggtaacttggacccttaaaaatctttagagtaaaagtagtataa 13064514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 299
Target Start/End: Complemental strand, 13196295 - 13196105
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaacatg-agttacatccctt 208  Q
    ||||||||||  |||||||||  |||| |||||| ||||||||||||  ||||||||||||| ||||||| |||||||||| ||   |||| ||  ||||    
T  13196295 atgaaagtgatttcttgtgttgcaagtgttcttgctatacccacatcaagttttattgtgaa-aattctctaatgagaaaagcacctagttgcaatcctt 13196197  T
Q  209 aagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaatt-aaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     || || |||||| |||||||||||||||| |||||||||||| ||| ||||| ||  ||| | |||||| |||||||||||| ||||||||    
T  13196196 gagtaagtgtatgaataggtattttaaggaacacgttctaactttaatggtaacttggacccttaaaaatcttcagagtaaaagtagtataa 13196105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 299
Target Start/End: Original strand, 13694265 - 13694456
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat-aattctccaatgagaaaaacatgagttacatccctt 208  Q
    |||||||||||||||| | |||| ||| ||||||||||||||||||||||||| |   ||||| ||||||||||||||||| |||  |||| | ||||||    
T  13694265 atgaaagtgaactcttatatttttagttttcttgatatacccacatcttgtttcaaaatgaataaattctccaatgagaaatacacaagttgcttccctt 13694364  T
Q  209 aagcaattgtatg-gataggtattttaaggagcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     || || |||||| |  || |||||| |||| |||||||| | | | |||||||||||||| ||||||||  ||| ||||||| ||||||||    
T  13694365 gagtaaatgtatgagtaagatatttttaggaacacgttctgattattaaggtaaattaaccctcaaaaatcctcaaagtaaaagtagtataa 13694456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 299
Target Start/End: Original strand, 15945989 - 15946182
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaa--taattctccaatgagaaaaaca-tgagttacatccc 206  Q
    ||||||||||  ||||||||| |||||||||||| ||||||||||||  |||||||||||||   |||||||||||||||||||||   |||| ||  ||    
T  15945989 atgaaagtgatttcttgtgttataagtattcttgctatacccacatcaagttttattgtgaaataaattctccaatgagaaaaacacctagttgcaatcc 15946088  T
Q  207 ttaagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaa-attaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    || || || ||||||  ||||||||||||||| ||||||||| || ||| |||||  |  ||| | |||||| |||||||||||| ||||||||    
T  15946089 ttgagtaagtgtatgagtaggtattttaaggaacacgttctagctttaatggtaacctggacccttaaaaatcttcagagtaaaagtagtataa 15946182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 299
Target Start/End: Original strand, 20560385 - 20560578
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaa--taattctccaatgagaaaaaca-tgagttacatccc 206  Q
    ||||||||||  ||||||||| |||||||||||| ||||||||||||  |||||||||||||   |||||||||||||||||||||   |||| ||  ||    
T  20560385 atgaaagtgatttcttgtgttataagtattcttgctatacccacatcaagttttattgtgaaataaattctccaatgagaaaaacacctagttgcaatcc 20560484  T
Q  207 ttaagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaa-attaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    || || || ||||||  ||||||||||||||| ||||||||| || ||| |||||  |  ||| | |||||| |||||||||||| ||||||||    
T  20560485 ttgagtaagtgtatgagtaggtattttaaggaacacgttctagctttaatggtaacctggacccttaaaaatcttcagagtaaaagtagtataa 20560578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 299
Target Start/End: Original strand, 20562693 - 20562886
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaa--taattctccaatgagaaaaaca-tgagttacatccc 206  Q
    ||||||||||  ||||||||| |||||||||||| ||||||||||||  |||||||||||||   |||||||||||||||||||||   |||| ||  ||    
T  20562693 atgaaagtgatttcttgtgttataagtattcttgctatacccacatcaagttttattgtgaaataaattctccaatgagaaaaacacctagttgcaatcc 20562792  T
Q  207 ttaagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaa-attaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    || || || ||||||  ||||||||||||||| ||||||||| || ||| |||||  |  ||| | |||||| |||||||||||| ||||||||    
T  20562793 ttgagtaagtgtatgagtaggtattttaaggaacacgttctagctttaatggtaacctggacccttaaaaatcttcagagtaaaagtagtataa 20562886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 238
Target Start/End: Complemental strand, 22165163 - 22165031
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataa--ttctccaatgagaaaaacatga--gttacatcc 205  Q
    |||||||  |||||||||||| ||||| |||||||||||||||||||||||||||  ||||||||  |||||||||||||||||||  |  ||| | |||    
T  22165163 atgaaagcaaactcttgtgttctaagttttcttgatatacccacatcttgttttaaagtgaataaaattctccaatgagaaaaacacaaaagttgcttcc 22165064  T
Q  206 cttaagcaattgtatggataggtattttaagga 238  Q
    ||| || || |||||| ||||||||||||||||    
T  22165063 cttgagtaaatgtatgaataggtattttaagga 22165031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 236
Target Start/End: Original strand, 37941742 - 37941871
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatccc 206  Q
    |||||||  |||||||||||||||||| ||||||||||| |||||||||||||||  ||||||  |||||||||||||||||||||   |||| | ||||    
T  37941742 atgaaagcaaactcttgtgttttaagtcttcttgatataaccacatcttgttttaaagtgaataaaattctccaatgagaaaaacacaaagttgcttccc 37941841  T
Q  207 ttaagcaattgtatggataggtattttaag 236  Q
    || || || |||||| ||||||||||||||    
T  37941842 ttgagtaaatgtatgaataggtattttaag 37941871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 119 - 193
Target Start/End: Complemental strand, 13505350 - 13505274
Alignment:
Q  119 aactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca 193  Q
    |||||||||||||||||| |||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||    
T  13505350 aactcttgtgttttaagtcttcttgatatacccacatcttgttttaaagtgaataaaattctccaatgagaaaaaca 13505274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 119 - 193
Target Start/End: Complemental strand, 16449576 - 16449500
Alignment:
Q  119 aactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca 193  Q
    |||||||||||||||||| |||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||    
T  16449576 aactcttgtgttttaagtcttcttgatatacccacatcttgttttaaagtgaataaaattctccaatgagaaaaaca 16449500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 238
Target Start/End: Complemental strand, 10161024 - 10160893
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatccc 206  Q
    |||||||  |||||||||||||||||| ||||||||||| |||||||||||||||  ||||||  |||||||||||||||||||||   |||| | ||||    
T  10161024 atgaaagcaaactcttgtgttttaagtcttcttgatataaccacatcttgttttaaagtgaataaaattctccaatgagaaaaacacaaagttgcttccc 10160925  T
Q  207 ttaagcaattgtatggataggtattttaagga 238  Q
    || || || || ||| ||||||||||||||||    
T  10160924 ttgagtaaatgaatgaataggtattttaagga 10160893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 238
Target Start/End: Complemental strand, 13188257 - 13188138
Alignment:
Q  122 tcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatcccttaagcaattgt 218  Q
    ||||||||||||||| ||||||||||| |||||||||||||||  ||||||  |||||||||||||||||||||   |||| | |||||| || || |||    
T  13188257 tcttgtgttttaagtcttcttgatataaccacatcttgttttaaagtgaataaaattctccaatgagaaaaacacaaagttgcttcccttgagtaaatgt 13188158  T
Q  219 atggataggtattttaagga 238  Q
    ||| ||||||||||||||||    
T  13188157 atgaataggtattttaagga 13188138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 122 - 299
Target Start/End: Original strand, 20565013 - 20565194
Alignment:
Q  122 tcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaa--taattctccaatgagaaaaaca-tgagttacatcccttaagcaattgt 218  Q
    ||||||||| |||||||||||| ||||||||||||  |||||||||||||   |||||||||||||||||||||   |||| ||  |||| || || |||    
T  20565013 tcttgtgttataagtattcttgctatacccacatcaagttttattgtgaaataaattctccaatgagaaaaacacctagttgcaatccttgagtaagtgt 20565112  T
Q  219 atggataggtattttaaggagcacgttctaactctaaaggtaa-attaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    |||  ||||||||||||||| ||||||||| || ||| |||||  |  ||| | |||||| |||||||||||| ||||||||    
T  20565113 atgagtaggtattttaaggaacacgttctagctttaatggtaacctggacccttaaaaatcttcagagtaaaagtagtataa 20565194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 110 - 238
Target Start/End: Complemental strand, 16374329 - 16374198
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatccc 206  Q
    |||||||  |||||||||||||||||| ||||| ||||| |||||||||||||||  ||||||  |||||||||||||||||||||   |||| | ||||    
T  16374329 atgaaagcaaactcttgtgttttaagtcttcttaatataaccacatcttgttttaaagtgaataaaattctccaatgagaaaaacacaaagttgcttccc 16374230  T
Q  207 ttaagcaattgtatggataggtattttaagga 238  Q
    || ||  | |||||| ||||||||||||||||    
T  16374229 ttgagtgaatgtatgaataggtattttaagga 16374198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 119 - 238
Target Start/End: Original strand, 15644461 - 15644583
Alignment:
Q  119 aactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataa--ttctccaatgagaaaaaca-tgagttacatcccttaagcaat 215  Q
    |||||||||||||||||  |||||||||||||||||||||||||||  ||||||||  |||| ||||||||||||||   |||| | |||||| || ||     
T  15644461 aactcttgtgttttaagccttcttgatatacccacatcttgttttaaagtgaataaagttcttcaatgagaaaaacacaaagttgcttcccttgagtaag 15644560  T
Q  216 tgtatggataggtattttaagga 238  Q
    |||||| ||||||| ||||||||    
T  15644561 tgtatgaataggtaatttaagga 15644583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 16655105 - 16655178
Alignment:
Q  122 tcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca 193  Q
    ||||||||||||||| ||||||||||| |||||||||||||||  ||||||  |||||||||||||||||||||    
T  16655105 tcttgtgttttaagtcttcttgatataaccacatcttgttttaaagtgaataaaattctccaatgagaaaaaca 16655178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 46226981 - 46226887
Alignment:
Q  3 cccctaaccttcacgaagttgtgattttgaccccctnnnnnnnnctacaaaactgtccattaagttttgcaactgtagcagttttagccccccaa 97  Q
    |||||||| |||||||||||| ||||||||||||||        ||||||||| ||||  ||| |||||||||||||||||||||||||||||||    
T  46226981 cccctaactttcacgaagttgcgattttgaccccctaaaaaaaactacaaaaccgtcccataacttttgcaactgtagcagttttagccccccaa 46226887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 224 - 299
Target Start/End: Complemental strand, 12390398 - 12390323
Alignment:
Q  224 taggtattttaaggagcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    ||||| ||||||||||||||||||||||  || |||||||||||| ||||||||||| | ||||||| ||||||||    
T  12390398 taggtgttttaaggagcacgttctaacttcaatggtaaattaaccctcaaaaattttaatagtaaaagtagtataa 12390323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 113 - 299
Target Start/End: Complemental strand, 8687180 - 8686995
Alignment:
Q  113 aaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaa--acatgagttacatcccttaa 210  Q
    |||||||  ||||||||||| ||| ||||||||||||||||||| |||||||||||||| |||||| |  ||||| ||  |||  |||||||  | || |    
T  8687180 aaagtgatttcttgtgttttgagtgttcttgatatacccacatcatgttttattgtgaa-aattct-ctttgagacaagtaca-aagttacaatctttga 8687084  T
Q  211 gcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    | |||||| | |||| ||||||||||||| ||||||||||| |   |||||||| ||||| |||| | |||||||||||| | ||||||    
T  8687083 gtaattgtgtagatatgtattttaaggagtacgttctaacttttgtggtaaattgacctttaaaagtcttcagagtaaaagtggtataa 8686995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 129 - 238
Target Start/End: Complemental strand, 15557775 - 15557663
Alignment:
Q  129 ttttaagtattcttgatatacccacatcttgttttattgtgaataa--ttctccaatgagaaaaaca-tgagttacatcccttaagcaattgtatggata 225  Q
    |||| ||| |||||||||||||||||||||||||||  ||||||||  |||| ||||||||||||||   |||| | |||||| || || |||||| |||    
T  15557775 tttttagtcttcttgatatacccacatcttgttttaaagtgaataaagttcttcaatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaata 15557676  T
Q  226 ggtattttaagga 238  Q
    |||||||||||||    
T  15557675 ggtattttaagga 15557663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 121 - 299
Target Start/End: Complemental strand, 10547712 - 10547532
Alignment:
Q  121 ctcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat-aattctccaatgagaaaaacatgagttacatcccttaagcaattgta 219  Q
    ||||||||||||||||  || |||||||||| ||||||||||||  |||||| ||  |||||||||||||  ||  |||| | |||||| || || ||||    
T  10547712 ctcttgtgttttaagttctcctgatatacccgcatcttgttttaaagtgaataaaacctccaatgagaaatgcacaagttgcttcccttgagtaaatgta 10547613  T
Q  220 tggataggtattttaagg-agcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    || ||||||||||||||| |   |||||||| | ||   |||  |||||||| ||||||| ||| ||||||||||||||||    
T  10547612 tgaataggtattttaaggaaatgcgttctaattttagtagtacgttaacctttaaaaattctcaaagtaaaaatagtataa 10547532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 12161045 - 12160981
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataa 174  Q
    |||||||| ||||||||||||||||||  || |||||||||||| ||||||||||  ||||||||    
T  12161045 atgaaagtaaactcttgtgttttaagttctcctgatatacccacttcttgttttaaagtgaataa 12160981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 299
Target Start/End: Original strand, 16702708 - 16702783
Alignment:
Q  224 taggtattttaaggagcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    |||||||||||||||| ||||||||||| ||  |||||||| ||| | |||| | |||||||||||| ||||||||    
T  16702708 taggtattttaaggagtacgttctaactttagtggtaaattgacccttaaaagtcttcagagtaaaagtagtataa 16702783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 97
Target Start/End: Complemental strand, 25154428 - 25154378
Alignment:
Q  47 ctacaaaactgtccattaagttttgcaactgtagcagttttagccccccaa 97  Q
    ||||||||| | || |||||||||||||||||||||||||| |||||||||    
T  25154428 ctacaaaaccgccccttaagttttgcaactgtagcagttttggccccccaa 25154378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 97
Target Start/End: Complemental strand, 4474301 - 4474267
Alignment:
Q  63 taagttttgcaactgtagcagttttagccccccaa 97  Q
    ||||||||||||||||||||||||| |||||||||    
T  4474301 taagttttgcaactgtagcagttttggccccccaa 4474267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 97
Target Start/End: Original strand, 44436471 - 44436505
Alignment:
Q  63 taagttttgcaactgtagcagttttagccccccaa 97  Q
    ||||||||||||||||||||||||| |||||||||    
T  44436471 taagttttgcaactgtagcagttttggccccccaa 44436505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 97
Target Start/End: Original strand, 54719073 - 54719107
Alignment:
Q  63 taagttttgcaactgtagcagttttagccccccaa 97  Q
    ||||||||||||||||||||||||| |||||||||    
T  54719073 taagttttgcaactgtagcagttttggccccccaa 54719107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 171
Target Start/End: Complemental strand, 12390498 - 12390449
Alignment:
Q  122 tcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaa 171  Q
    ||||||||||||||| |||||| |||||||||||| ||||| | ||||||    
T  12390498 tcttgtgttttaagtgttcttgctatacccacatcatgtttcaatgtgaa 12390449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 28944213 - 28944164
Alignment:
Q  47 ctacaaaactgtccattaagttttgcaactgtagcagttttagcccccca 96  Q
    ||||||||| |||| |||||||||||||||  ||||||||| ||||||||    
T  28944213 ctacaaaaccgtcccttaagttttgcaacttcagcagttttggcccccca 28944164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 96
Target Start/End: Original strand, 51315577 - 51315610
Alignment:
Q  63 taagttttgcaactgtagcagttttagcccccca 96  Q
    ||||||||||||||||||||||||| ||||||||    
T  51315577 taagttttgcaactgtagcagttttggcccccca 51315610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 11866170 - 11866222
Alignment:
Q  122 tcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataa 174  Q
    |||||||||||||||  || | |||||||||||||||||||||  ||||||||    
T  11866170 tcttgtgttttaagttctccttatatacccacatcttgttttaaagtgaataa 11866222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 94
Target Start/End: Complemental strand, 25248919 - 25248887
Alignment:
Q  62 ttaagttttgcaactgtagcagttttagccccc 94  Q
    |||||||||||||||||||||||||| ||||||    
T  25248919 ttaagttttgcaactgtagcagttttggccccc 25248887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 130; Significance: 2e-67; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 126 - 299
Target Start/End: Original strand, 25962222 - 25962395
Alignment:
Q  126 gtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaacatgagttacatcccttaagcaattgtatggata 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||| ||||| |||||| |||    
T  25962222 gtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaagcacgagttgcatcccttgagcaaatgtatgaata 25962321  T
Q  226 ggtattttaaggagcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||| ||||||| ||||||||    
T  25962322 ggtattttaaggagcacgttctaactctaaaggtaaattaaccctaaaaaaatttcaaagtaaaagtagtataa 25962395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 126 - 299
Target Start/End: Original strand, 25966869 - 25967042
Alignment:
Q  126 gtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaacatgagttacatcccttaagcaattgtatggata 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||| ||||| |||||| |||    
T  25966869 gtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaagcacgagttgcatcccttgagcaaatgtatgaata 25966968  T
Q  226 ggtattttaaggagcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||| ||||||| ||||||||    
T  25966969 ggtattttaaggagcacgttctaactctaaaggtaaattaaccctaaaaaaatttcaaagtaaaagtagtataa 25967042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 110 - 299
Target Start/End: Complemental strand, 30672577 - 30672388
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaacatgagttacatccctta 209  Q
    |||||||| |||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||  |||| ||||||||     
T  30672577 atgaaagtaaactcttgtgttttaagttttcttgatatacacatatcttgttttattgtgaataattctccaatgagaaaaacacaagttgcatcccttg 30672478  T
Q  210 agcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    || ||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||| ||||||| ||||||||||||| ||||||||    
T  30672477 agaaattgtatgaataggtattttaaggagcacgttctgactcttaaggtaaattaaccctcaaaaaatttcagagtaaaagtagtataa 30672388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 126 - 299
Target Start/End: Original strand, 25962702 - 25962875
Alignment:
Q  126 gtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaacatgagttacatcccttaagcaattgtatggata 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||| ||||| |||||| |||    
T  25962702 gtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaagcacgagttgcatcccttgagcaaatgtatgaata 25962801  T
Q  226 ggtattttaaggagcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     ||||||||||||||||||| |||||||||||||||||||||| | ||||||||||| ||||||| ||||||||    
T  25962802 tgtattttaaggagcacgttttaactctaaaggtaaattaaccctaaaaaattttcaaagtaaaagtagtataa 25962875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 126 - 299
Target Start/End: Original strand, 25967349 - 25967522
Alignment:
Q  126 gtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaacatgagttacatcccttaagcaattgtatggata 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||| ||||| |||||| |||    
T  25967349 gtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaagcacgagttgcatcccttgagcaaatgtatgaata 25967448  T
Q  226 ggtattttaaggagcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     ||||||||||||||||||| |||||||||||||||||||||| | ||||||||||| ||||||| ||||||||    
T  25967449 tgtattttaaggagcacgttttaactctaaaggtaaattaaccctaaaaaattttcaaagtaaaagtagtataa 25967522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 162 - 299
Target Start/End: Complemental strand, 19586343 - 19586206
Alignment:
Q  162 ttattgtgaataattctccaatgagaaaaacatgagttacatcccttaagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaa 261  Q
    ||||||||||||||||||||||||||||| ||  |||| |||||||| |||||||||||| ||||||||||||||||||||||||| ||||| |||||||    
T  19586343 ttattgtgaataattctccaatgagaaaagcacaagttgcatcccttgagcaattgtatgaataggtattttaaggagcacgttctgactcttaaggtaa 19586244  T
Q  262 attaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    ||||||| | ||||| ||||||||||||| ||||||||    
T  19586243 attaaccctaaaaaaatttcagagtaaaagtagtataa 19586206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 110 - 299
Target Start/End: Original strand, 18447579 - 18447770
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat-aattctccaatgagaaaaacatgagttacatccctt 208  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||  |||||| |||||||||||||||||||||  |||| | ||||||    
T  18447579 atgaaagtaaactcttgtgttttaagttttcttgatatacccacatcttgttttaacgtgaataaattctccaatgagaaaaacacaagttgcttccctt 18447678  T
Q  209 aagcaattgtatggataggtattttaagg-agcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     || || |||||| ||||||||||||||| |   |||||||| | ||  ||||  || ||||| ||||||||||| ||||||| ||||||||    
T  18447679 gagtaagtgtatgaataggtattttaaggaaatgcgttctaattttagtggtacgttgacctttaaaaattttcaaagtaaaagtagtataa 18447770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 110 - 238
Target Start/End: Complemental strand, 25632199 - 25632070
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat-aattctccaatgagaaaaacatgagttacatccctt 208  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||| ||||||||||||||| || ||  |||| | ||||||    
T  25632199 atgaaagtgaactcttgtgttttaagttttcttgatatacccacattttgttttaatgtgaataaattctccaatgagataagcacaagttgcttccctt 25632100  T
Q  209 aagcaattgtatggataggtattttaagga 238  Q
     || || |||||| ||| ||||||||||||    
T  25632099 gagtaagtgtatgaatatgtattttaagga 25632070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 110 - 238
Target Start/End: Complemental strand, 22062357 - 22062226
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatccc 206  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||   |||| | ||||    
T  22062357 atgaaagtaaactcttgtgttttaagtcttcttgatatacccacatcttgttttaaagtgaataaaattctccaatgagaaaaacacaaagttgcttccc 22062258  T
Q  207 ttaagcaattgtatggataggtattttaagga 238  Q
    || || || |||||| ||||||||||||||||    
T  22062257 ttgagtaaatgtatgaataggtattttaagga 22062226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 18011231 - 18011359
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat-aattctccaatgagaaaaacatgagttacatccctt 208  Q
    |||||||| |||||||||||||||||| ||| |||||||||||||||||||||||  |||||| |||||||||||||||||  ||  |||| | ||||||    
T  18011231 atgaaagtaaactcttgtgttttaagttttcctgatatacccacatcttgttttaaagtgaataaattctccaatgagaaatgcacaagtt-cttccctt 18011329  T
Q  209 aagcaattgtatggataggtattttaagga 238  Q
     || || |||||||||||||||||||||||    
T  18011330 gagtaaatgtatggataggtattttaagga 18011359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 18853378 - 18853507
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat-aattctccaatgagaaaaacatgagttacatccctt 208  Q
    |||||||| ||||||||||| |||||| ||||||| |||||||||||||||||||  |||| | |||||||||||||||||||||  |||| | ||||||    
T  18853378 atgaaagtaaactcttgtgtcttaagttttcttgacatacccacatcttgttttaaagtgactaaattctccaatgagaaaaacacaagttgcttccctt 18853477  T
Q  209 aagcaattgtatggataggtattttaagga 238  Q
     || || |||||| ||||||||||||||||    
T  18853478 gagtaagtgtatgaataggtattttaagga 18853507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 25625131 - 25625260
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat-aattctccaatgagaaaaacatgagttacatccctt 208  Q
    |||||||| |||||||||||||||||| ||| | |||||||||||||||||||||  |||||| |||||||||||||||||  ||  |||| | ||||||    
T  25625131 atgaaagtaaactcttgtgttttaagttttcctcatatacccacatcttgttttaaagtgaataaattctccaatgagaaatgcacaagtttcttccctt 25625230  T
Q  209 aagcaattgtatggataggtattttaagga 238  Q
     || || |||||||||||||||||||||||    
T  25625231 gagtaaatgtatggataggtattttaagga 25625260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 238
Target Start/End: Complemental strand, 22166401 - 22166270
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatccc 206  Q
    |||||||  |||||||||||||||||| |||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||   |||| | ||||    
T  22166401 atgaaagcaaactcttgtgttttaagtcttcttgatatacccacatcttgttttaaagtgaataaaattctccaatgagaaaaacacaaagttgcttccc 22166302  T
Q  207 ttaagcaattgtatggataggtattttaagga 238  Q
    || || || |||||| ||||||||||||||||    
T  22166301 ttgagtaaatgtatgaataggtattttaagga 22166270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 22243176 - 22243307
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatccc 206  Q
    |||||||  |||||||||||||||||| |||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||   |||| | ||||    
T  22243176 atgaaagcaaactcttgtgttttaagtcttcttgatatacccacatcttgttttaaagtgaataaaattctccaatgagaaaaacacaaagttgcttccc 22243275  T
Q  207 ttaagcaattgtatggataggtattttaagga 238  Q
    || || || |||||| ||||||||||||||||    
T  22243276 ttgagtaaatgtatgaataggtattttaagga 22243307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 119 - 238
Target Start/End: Original strand, 15698928 - 15699050
Alignment:
Q  119 aactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatcccttaagcaat 215  Q
    |||||||||||||||||| |||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||   |||| | |||||| || ||     
T  15698928 aactcttgtgttttaagtcttcttgatatacccacatcttgttttaaagtgaataaaattctccaatgagaaaaacacaaagttgcttcccttgagtaaa 15699027  T
Q  216 tgtatggataggtattttaagga 238  Q
    |||||| ||||||||||||||||    
T  15699028 tgtatgaataggtattttaagga 15699050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 29595066 - 29595196
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaacatgagttacatccct 207  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||||     |||||  |||||||||||||||||||||  |||| | |||||    
T  29595066 atgaaagtgaactcttgtattttaagttttcttgatatacccacatcttgtttccaaatgaatgaaattctccaatgagaaaaacacaagttgcttccct 29595165  T
Q  208 taagcaattgtatggataggtattttaagga 238  Q
    | || || |||||| ||||||||||||||||    
T  29595166 tgagtaagtgtatgaataggtattttaagga 29595196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 110 - 299
Target Start/End: Complemental strand, 8724564 - 8724373
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaaca-tgagttacatccctt 208  Q
    ||||||||||  ||||||||| ||||| |||||| ||||||||||||  ||||||||||||| |||||||||||||||||| ||   |||| ||  ||||    
T  8724564 atgaaagtgatttcttgtgttgtaagtgttcttgctatacccacatcaagttttattgtgaa-aattctccaatgagaaaagcacctagttgcaatcctt 8724466  T
Q  209 aagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaatt--aaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     || || |||||| |||||||||||||||| |||||||||||  ||| ||||| ||  | |||| ||||  ||||||||||||| ||||||||    
T  8724465 tagtaagtgtatgaataggtattttaaggaacacgttctaaccttaatggtaatttggacccttaaaaatctttcagagtaaaagtagtataa 8724373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 20169606 - 20169737
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatccc 206  Q
    |||||||  |||||||||||||||||| ||||||||||| |||||||||||||||  ||||||  |||||||||||||||||||||   |||| | ||||    
T  20169606 atgaaagcaaactcttgtgttttaagtcttcttgatataaccacatcttgttttaaagtgaataaaattctccaatgagaaaaacacaaagttgcttccc 20169705  T
Q  207 ttaagcaattgtatggataggtattttaagga 238  Q
    || || || |||||| ||||||||||||||||    
T  20169706 ttgagtaaatgtatgaataggtattttaagga 20169737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 299
Target Start/End: Complemental strand, 21561278 - 21561087
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat-aattctccaatgagaaaaacatgagttacatccctt 208  Q
    |||||| | |||||||||||||||||| ||||||||||||||||||||| ||| |   ||||| |||||||||||||||||  ||  |||| | ||||||    
T  21561278 atgaaaataaactcttgtgttttaagttttcttgatatacccacatcttatttcaaaatgaataaattctccaatgagaaatgcacaagttgcttccctt 21561179  T
Q  209 aagcaattgtatg-gataggtattttaaggagcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     || || |||||| |  || |||||| |||| |||||||||| | | |||||||||||||| ||||||||  ||| ||||||| ||||||||    
T  21561178 gagtaaatgtatgagtaagatatttttaggaacacgttctaattattaaggtaaattaaccctcaaaaatcctcaaagtaaaagtagtataa 21561087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 119 - 238
Target Start/End: Complemental strand, 24856087 - 24855965
Alignment:
Q  119 aactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatcccttaagcaat 215  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||  ||||||  |||||||||||||||||||||   |||| | |||||| || ||     
T  24856087 aactcttgtgttttaagtcttcttgatataaccacatcttgttttaaagtgaataaaattctccaatgagaaaaacacaaagttgcttcccttgagtaaa 24855988  T
Q  216 tgtatggataggtattttaagga 238  Q
    |||||| ||||||||||||||||    
T  24855987 tgtatgaataggtattttaagga 24855965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 238
Target Start/End: Complemental strand, 22767967 - 22767836
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatccc 206  Q
    |||||||  |||||||||||||||||| ||||||||||| ||||||||||||| |  ||||||  |||||||||||||||||||||   |||| | ||||    
T  22767967 atgaaagcaaactcttgtgttttaagtcttcttgatataaccacatcttgtttcaaagtgaataaaattctccaatgagaaaaacacaaagttgcttccc 22767868  T
Q  207 ttaagcaattgtatggataggtattttaagga 238  Q
    || || || |||||| ||||||||||||||||    
T  22767867 ttgagtaaatgtatgaataggtattttaagga 22767836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 299
Target Start/End: Complemental strand, 23518603 - 23518417
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaacatgagttacatccctta 209  Q
    ||||||||||  ||||||||||||||| |||||| ||||||||||||  ||||||||||||| ||||||    |||||||| ||  |||| ||  | ||     
T  23518603 atgaaagtgatttcttgtgttttaagtgttcttgctatacccacatcaggttttattgtgaa-aattctg---tgagaaaagcacaagttgcagtctttg 23518508  T
Q  210 agcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaatt-aaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    || || |||||   |||||||||||||||||||||||||||| ||| |||||||| |||| | |||| | |||||||||||| ||||||||    
T  23518507 agtaagtgtattagtaggtattttaaggagcacgttctaactttaatggtaaattaaacccttaaaagtcttcagagtaaaattagtataa 23518417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 193
Target Start/End: Complemental strand, 15850834 - 15850748
Alignment:
Q  110 atgaaagtgaactcttgtgttttaa-gtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca 193  Q
    |||||||  |||||||||||||||| || |||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||    
T  15850834 atgaaagcaaactcttgtgttttaaagtcttcttgatatacccacatcttgttttaaagtgaataaaattctccaatgagaaaaaca 15850748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 119 - 238
Target Start/End: Complemental strand, 20017071 - 20016949
Alignment:
Q  119 aactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatcccttaagcaat 215  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||  ||||||  |||  ||||||||||||||||   |||| | |||||| || ||     
T  20017071 aactcttgtgttttaagtcttcttgatataaccacatcttgttttaaagtgaataaaatcttccaatgagaaaaacacaaagttgcttcccttgagtaaa 20016972  T
Q  216 tgtatggataggtattttaagga 238  Q
    |||||| ||||||||||||||||    
T  20016971 tgtatgaataggtattttaagga 20016949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 126 - 191
Target Start/End: Complemental strand, 18188417 - 18188351
Alignment:
Q  126 gtgttttaagtattcttgatatacccacatcttgttttattgtgaat-aattctccaatgagaaaaa 191  Q
    ||||||||||| |||||||||||||||||||||||||||  |||||| |||||||||||||||||||    
T  18188417 gtgttttaagttttcttgatatacccacatcttgttttaaagtgaataaattctccaatgagaaaaa 18188351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 47 - 97
Target Start/End: Complemental strand, 33401302 - 33401252
Alignment:
Q  47 ctacaaaactgtccattaagttttgcaactgtagcagttttagccccccaa 97  Q
    ||||||||||||||  ||||||||||||||||||||||||| |||||||||    
T  33401302 ctacaaaactgtcccctaagttttgcaactgtagcagttttggccccccaa 33401252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 126 - 261
Target Start/End: Original strand, 11219000 - 11219135
Alignment:
Q  126 gtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaaca-tgagttacatcccttaagcaattgtatggat 224  Q
    ||||| ||||| |||||| ||||||||||||  ||||||||||||| ||| ||||||||||| |||||   |||| ||  |||| || || |||||| ||    
T  11219000 gtgttgtaagtgttcttgctatacccacatcaagttttattgtgaa-aatcctccaatgagataaacacctagttgcaatccttgagtaagtgtatgaat 11219098  T
Q  225 aggtattttaaggagcacgttctaactctaaaggtaa 261  Q
    || ||||||||||| |||| ||||||| ||| |||||    
T  11219099 agatattttaaggaacacgctctaactttaatggtaa 11219135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 10727257 - 10727307
Alignment:
Q  47 ctacaaaactgtccattaagttttgcaactgtagcagttttagccccccaa 97  Q
    ||||||||||| ||  ||||||||||||||||||||||||| |||||||||    
T  10727257 ctacaaaactgccctctaagttttgcaactgtagcagttttggccccccaa 10727307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 299
Target Start/End: Original strand, 29685978 - 29686055
Alignment:
Q  224 taggtattttaaggagcacgttctaac--tctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    |||||||||||||||||||||||||||  | ||| |||||||| ||| | |||| | |||||||||||| ||||||||    
T  29685978 taggtattttaaggagcacgttctaactttataatggtaaattgacccttaaaattcttcagagtaaaagtagtataa 29686055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 254
Target Start/End: Original strand, 18978057 - 18978200
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaaca-tgagttacatccctt 208  Q
    ||||||||||  ||||||||||| ||| |||||| |||||||||||  | |||||||||||| |||||| |  |||||||| ||   |||| ||  | ||    
T  18978057 atgaaagtgatgtcttgtgttttgagtgttcttgctatacccacattatattttattgtgaa-aattct-ctttgagaaaagcacaaagttgcagtcttt 18978154  T
Q  209 aagcaattgtatggataggtattttaaggagcacgttctaactcta 254  Q
    |||||| ||| | | ||||||||||||||||||| |||||||||||    
T  18978155 aagcaagtgtgtaggtaggtattttaaggagcacattctaactcta 18978200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 94
Target Start/End: Complemental strand, 12766462 - 12766415
Alignment:
Q  47 ctacaaaactgtccattaagttttgcaactgtagcagttttagccccc 94  Q
    ||||||||| | || |||||||||||||||||||||||||| ||||||    
T  12766462 ctacaaaaccgccccttaagttttgcaactgtagcagttttggccccc 12766415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 28011373 - 28011327
Alignment:
Q  47 ctacaaaactgtccattaagttttgcaactgtagcagttttagcccc 93  Q
    ||||||||| | || |||||||||||||||||||||||||| |||||    
T  28011373 ctacaaaaccgccccttaagttttgcaactgtagcagttttggcccc 28011327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 97
Target Start/End: Original strand, 2840857 - 2840906
Alignment:
Q  48 tacaaaactgtccattaagttttgcaactgtagcagttttagccccccaa 97  Q
    |||||||| ||||  |||||||||||| |||||||||||| |||||||||    
T  2840857 tacaaaaccgtcccctaagttttgcaattgtagcagttttggccccccaa 2840906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 87
Target Start/End: Original strand, 266188 - 266228
Alignment:
Q  47 ctacaaaactgtccattaagttttgcaactgtagcagtttt 87  Q
    |||||||| || || ||||||||||||||||||||||||||    
T  266188 ctacaaaattgccccttaagttttgcaactgtagcagtttt 266228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 1377455 - 1377407
Alignment:
Q  47 ctacaaaactgtccattaagttttgcaactgtagcagttttagcccccc 95  Q
    |||||||||||| |  ||||||||||||||||| ||||||| |||||||    
T  1377455 ctacaaaactgttccctaagttttgcaactgtaacagttttggcccccc 1377407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 1385203 - 1385155
Alignment:
Q  47 ctacaaaactgtccattaagttttgcaactgtagcagttttagcccccc 95  Q
    |||||||||||| |  ||||||||||||||||| ||||||| |||||||    
T  1385203 ctacaaaactgttccctaagttttgcaactgtaacagttttggcccccc 1385155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 87
Target Start/End: Original strand, 2853494 - 2853534
Alignment:
Q  47 ctacaaaactgtccattaagttttgcaactgtagcagtttt 87  Q
    ||||||||| ||||  |||||||||||||||||||||||||    
T  2853494 ctacaaaaccgtcccctaagttttgcaactgtagcagtttt 2853534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 24389615 - 24389575
Alignment:
Q  224 taggtattttaaggagcacgttctaactctaaaggtaaatt 264  Q
    |||||||||||||||||||||||||||| ||  ||||||||    
T  24389615 taggtattttaaggagcacgttctaactttagtggtaaatt 24389575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 112; Significance: 1e-56; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 110 - 249
Target Start/End: Original strand, 20574822 - 20574961
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaacatgagttacatccctta 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||| ||||||||     
T  20574822 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaagcacaagttgcatcccttg 20574921  T
Q  210 agcaattgtatggataggtattttaaggagcacgttctaa 249  Q
    ||||| |||||| |||||||||||||||||||||||||||    
T  20574922 agcaactgtatgaataggtattttaaggagcacgttctaa 20574961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 110 - 299
Target Start/End: Original strand, 22947800 - 22947989
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaacatgagttacatccctta 209  Q
    ||||||||||| ||| ||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||  |||| ||||||||     
T  22947800 atgaaagtgaattctcgtgttttaagtgttcttgctatacctacatcttgttttattgtgaataattctccaatgagaaaagcacaagtttcatcccttg 22947899  T
Q  210 agcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    ||||| |||||| ||||||||||||||||||||||||||| | ||  |||| ||||||| | |||| | |||||||||||| ||||||||    
T  22947900 agcaagtgtatgaataggtattttaaggagcacgttctaattttagtggtacattaacccttaaaagtcttcagagtaaaagtagtataa 22947989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 24219196 - 24219325
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat-aattctccaatgagaaaaacatgagttacatccctt 208  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||  |||| | |||||||||||||||||||||  |||| | ||||||    
T  24219196 atgaaagtaaactcttgtgttttaagttttcttgatatacccacatcttgttttaaagtgactaaattctccaatgagaaaaacacaagttgcttccctt 24219295  T
Q  209 aagcaattgtatggataggtattttaagga 238  Q
     || || |||||| ||||||||||||||||    
T  24219296 gagtaagtgtatgaataggtattttaagga 24219325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 110 - 299
Target Start/End: Complemental strand, 25007640 - 25007447
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaa--taattctccaatgagaaaaaca--tgagttacatcc 205  Q
    ||||||||||  ||||||||| |||||||||||| ||||||||||||  |||||||||||||  ||||||||||||||||||||||  || ||| ||  |    
T  25007640 atgaaagtgatttcttgtgttataagtattcttgttatacccacatcaagttttattgtgaaattaattctccaatgagaaaaacacctg-gttgcaatc 25007542  T
Q  206 cttaagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaa-attaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    ||| || || |||||| |||||||||||||||| |||||||||||| ||| |||||  |  ||| | |||||| |||||||||||| ||||||||    
T  25007541 cttgagtaagtgtatgaataggtattttaaggaacacgttctaactttaatggtaacctggacccttaaaaatcttcagagtaaaagtagtataa 25007447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 110 - 299
Target Start/End: Complemental strand, 18485045 - 18484855
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaaca-tgagttacatccctt 208  Q
    ||||||||||  ||||||||| ||||| |||||| ||||||||||||  ||||||||||||| |||||||||||||||||| ||   |||| ||  ||||    
T  18485045 atgaaagtgatttcttgtgttgtaagtgttcttgctatacccacatcaagttttattgtgaa-aattctccaatgagaaaagcacctagttgcaatcctt 18484947  T
Q  209 aagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaatt-aaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     || || |||||| |||||||||||||||| |||||||||||| ||| ||||| ||  ||| | |||||| |||||||||||| ||||||||    
T  18484946 gagtaagtgtatgaataggtattttaaggaacacgttctaactttaatggtaacttggacccttaaaaatcttcagagtaaaagtagtataa 18484855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 110 - 238
Target Start/End: Complemental strand, 23601495 - 23601365
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaacatgagttacatccct 207  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||| || |  ||||||  |||||||||||||||||||||  |||| | |||||    
T  23601495 atgaaagtgaactcttgtattttaagttttcttgatatacccacatcttgcttcaaagtgaatacaattctccaatgagaaaaacacaagttgcttccct 23601396  T
Q  208 taagcaattgtatggataggtattttaagga 238  Q
    | || || |||||| ||||||||||||||||    
T  23601395 tgagtaagtgtatgaataggtattttaagga 23601365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 15734897 - 15735028
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatccc 206  Q
    |||||||  |||||||||||||||||| |||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||   |||| | ||||    
T  15734897 atgaaagcaaactcttgtgttttaagtcttcttgatatacccacatcttgttttaaagtgaataaaattctccaatgagaaaaacacaaagttgcttccc 15734996  T
Q  207 ttaagcaattgtatggataggtattttaagga 238  Q
    || || || |||||| ||||||||||||||||    
T  15734997 ttgagtaaatgtatgaataggtattttaagga 15735028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 299
Target Start/End: Complemental strand, 20445681 - 20445489
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat-aattctccaatgagaaaaaca-tgagttacatccct 207  Q
    |||||||| |||||||||| ||||||| |||||||||||| ||||||||||||||  |||||| |||||| ||||||||||| ||   |||| ||  |||    
T  20445681 atgaaagtaaactcttgtgctttaagttttcttgatatacgcacatcttgttttaaagtgaataaattctgcaatgagaaaagcacctagttgcaatcct 20445582  T
Q  208 taagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaatt-aaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    | || || |||||| ||||||||||||||||  ||||||||||| ||| ||||| ||  ||| | |||||| |||||||||||| ||||||||    
T  20445581 tgagtaagtgtatgaataggtattttaaggaatacgttctaactttaatggtaacttggacccttaaaaatcttcagagtaaaagtagtataa 20445489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 238
Target Start/End: Complemental strand, 20596681 - 20596550
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatccc 206  Q
    |||||||  |||||||||||||||||| |||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||   |||| | ||||    
T  20596681 atgaaagcaaactcttgtgttttaagtcttcttgatatacccacatcttgttttaaagtgaataaaattctccaatgagaaaaacacaaagttgcttccc 20596582  T
Q  207 ttaagcaattgtatggataggtattttaagga 238  Q
    || || || |||||| ||||||||||||||||    
T  20596581 ttgagtaaatgtatgaataggtattttaagga 20596550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 238
Target Start/End: Complemental strand, 20602967 - 20602836
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatccc 206  Q
    |||||||  |||||||||||||||||| |||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||   |||| | ||||    
T  20602967 atgaaagcaaactcttgtgttttaagtcttcttgatatacccacatcttgttttaaagtgaataaaattctccaatgagaaaaacacaaagttgcttccc 20602868  T
Q  207 ttaagcaattgtatggataggtattttaagga 238  Q
    || || || |||||| ||||||||||||||||    
T  20602867 ttgagtaaatgtatgaataggtattttaagga 20602836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 238
Target Start/End: Complemental strand, 20609258 - 20609127
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatccc 206  Q
    |||||||  |||||||||||||||||| |||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||   |||| | ||||    
T  20609258 atgaaagcaaactcttgtgttttaagtcttcttgatatacccacatcttgttttaaagtgaataaaattctccaatgagaaaaacacaaagttgcttccc 20609159  T
Q  207 ttaagcaattgtatggataggtattttaagga 238  Q
    || || || |||||| ||||||||||||||||    
T  20609158 ttgagtaaatgtatgaataggtattttaagga 20609127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 238
Target Start/End: Complemental strand, 20791568 - 20791437
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatccc 206  Q
    |||||||  |||||||||||||||||| |||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||   |||| | ||||    
T  20791568 atgaaagcaaactcttgtgttttaagtcttcttgatatacccacatcttgttttaaagtgaataaaattctccaatgagaaaaacacaaagttgcttccc 20791469  T
Q  207 ttaagcaattgtatggataggtattttaagga 238  Q
    || || || |||||| ||||||||||||||||    
T  20791468 ttgagtaaatgtatgaataggtattttaagga 20791437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 24939891 - 24940022
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatccc 206  Q
    |||||||  |||||||||||||||||| |||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||   |||| | ||||    
T  24939891 atgaaagcaaactcttgtgttttaagtcttcttgatatacccacatcttgttttaaagtgaataaaattctccaatgagaaaaacacaaagttgcttccc 24939990  T
Q  207 ttaagcaattgtatggataggtattttaagga 238  Q
    || || || |||||| ||||||||||||||||    
T  24939991 ttgagtaaatgtatgaataggtattttaagga 24940022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 299
Target Start/End: Original strand, 22854938 - 22855128
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaaca-tgagttacatccctt 208  Q
    ||||||||||  ||||||||| ||||| |||||| ||||||||||||  |||||| |||||| |||||||||||||||||| ||   |||| ||  ||||    
T  22854938 atgaaagtgatttcttgtgttgtaagtgttcttgctatacccacatcaagttttaatgtgaa-aattctccaatgagaaaagcacctagttgcaatcctt 22855036  T
Q  209 aagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaatt-aaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     || || |||||| |||||||||||||||| |||||||||||| ||| ||||| ||  ||| | |||||| |||||||||||| ||||||||    
T  22855037 gagtaagtgtatgaataggtattttaaggaacacgttctaactttaatggtaacttggacccttaaaaatcttcagagtaaaagtagtataa 22855128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 119 - 238
Target Start/End: Complemental strand, 23711520 - 23711398
Alignment:
Q  119 aactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatcccttaagcaat 215  Q
    |||||||||||||||||| |||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||   |||| | |||||| || ||     
T  23711520 aactcttgtgttttaagtcttcttgatatacccacatcttgttttaaagtgaataaaattctccaatgagaaaaacacaaagttgcttcccttgagtaaa 23711421  T
Q  216 tgtatggataggtattttaagga 238  Q
    |||||| ||||||||||||||||    
T  23711420 tgtatgaataggtattttaagga 23711398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 119 - 238
Target Start/End: Complemental strand, 21281760 - 21281640
Alignment:
Q  119 aactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat-aattctccaatgagaaaaacatgagttacatcccttaagcaattg 217  Q
    |||||||||||||||||| ||||||||||||||||||||||||||   |||||| |||| |||||||| |||||||  |||| | |||||| || || ||    
T  21281760 aactcttgtgttttaagttttcttgatatacccacatcttgttttgaagtgaataaattatccaatgaaaaaaacactagttgcttcccttgagtaagtg 21281661  T
Q  218 tatggataggtattttaagga 238  Q
    |||| ||||||||||||||||    
T  21281660 tatgaataggtattttaagga 21281640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 299
Target Start/End: Complemental strand, 22318350 - 22318161
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaacatg-agttacatccctt 208  Q
    ||||||||||  ||||||||| ||||| |||| | ||||||||||||  ||||||||||||| |||||||||||||||||| ||   |||| ||  ||||    
T  22318350 atgaaagtgatttcttgtgttgtaagtgttct-gctatacccacatcaagttttattgtgaa-aattctccaatgagaaaagcacctagttgcaatcctt 22318253  T
Q  209 aagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaatt-aaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     || || |||||| |||||||||||||||| |||||||||||| ||| ||||| ||  ||| | |||||| |||||||||||| ||||||||    
T  22318252 gagtaagtgtatgaataggtattttaaggaacacgttctaactttaatggtaacttggaccctaaaaaatcttcagagtaaaagtagtataa 22318161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 119 - 238
Target Start/End: Original strand, 23747422 - 23747544
Alignment:
Q  119 aactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatcccttaagcaat 215  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||  ||||||  |||||||||||||||||||||   |||| | |||||| || ||     
T  23747422 aactcttgtgttttaagtcttcttgatataaccacatcttgttttaaagtgaataaaattctccaatgagaaaaacacaaagttgcttcccttgagtaaa 23747521  T
Q  216 tgtatggataggtattttaagga 238  Q
    |||||| ||||||||||||||||    
T  23747522 tgtatgaataggtattttaagga 23747544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 299
Target Start/End: Complemental strand, 30760486 - 30760296
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaaca-tgagttacatccctt 208  Q
    ||||||||||  ||||||||| |||||||||||| ||||||||||||  ||||||||||||| |||||||||||||||||| ||   |||| ||  ||||    
T  30760486 atgaaagtgatttcttgtgttataagtattcttgctatacccacatcaagttttattgtgaa-aattctccaatgagaaaagcacctagttgcaatcctt 30760388  T
Q  209 aagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaa-attaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     || || |||||| ||| |||||||||||| ||||||||| || ||| |||||  |  ||| | |||||| |||||||||||| ||||||||    
T  30760387 gagtaagtgtatgaatatgtattttaaggaacacgttctagctttaatggtaacctggacccttaaaaatcttcagagtaaaagtagtataa 30760296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 299
Target Start/End: Original strand, 26847031 - 26847224
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaa--taattctccaatgagaaaaaca-tgagttacatccc 206  Q
    ||||||||||   |||||||| ||||||||||||||||||||||||| ||||||||||||||   |||||||||||||||||||||   |||| ||  ||    
T  26847031 atgaaagtgattgcttgtgttgtaagtattcttgatatacccacatcatgttttattgtgaaataaattctccaatgagaaaaacacccagttgcaatcc 26847130  T
Q  207 ttaagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaa-attaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    || || || |||||   ||||||||||||||| ||||||||| || ||| |||||  |  ||| | |||||| |||||||||||| ||||||||    
T  26847131 ttgagtaagtgtataagtaggtattttaaggaacacgttctagctttaatggtaacctggacccttaaaaatcttcagagtaaaagtagtataa 26847224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 119 - 236
Target Start/End: Original strand, 20621534 - 20621654
Alignment:
Q  119 aactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatcccttaagcaat 215  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||  ||||||  |||||||||||||||||||||   |||| | |||||| || ||     
T  20621534 aactcttgtgttttaagtcttcttgatataaccacatcttgttttaaagtgaataaaattctccaatgagaaaaacacaaagttgcttcccttgagtaaa 20621633  T
Q  216 tgtatggataggtattttaag 236  Q
    |||||| ||||||||||||||    
T  20621634 tgtatgaataggtattttaag 20621654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 119 - 238
Target Start/End: Complemental strand, 24954016 - 24953894
Alignment:
Q  119 aactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatcccttaagcaat 215  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||   |||||  |||||||||||||||||||||   |||| | |||||| || ||     
T  24954016 aactcttgtgttttaagtcttcttgatataaccacatcttgttttaaaatgaataaaattctccaatgagaaaaacacaaagttgcttcccttgagtaaa 24953917  T
Q  216 tgtatggataggtattttaagga 238  Q
    |||||| ||||||||||||||||    
T  24953916 tgtatgaataggtattttaagga 24953894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 18072263 - 18072394
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataa--ttctccaatgagaaaaaca-tgagttacatccc 206  Q
    |||||||  |||||||||||||||||  |||||||||||||||||||||||||||  ||||||||  |||| ||||||||||||||   |||| | ||||    
T  18072263 atgaaagcaaactcttgtgttttaagccttcttgatatacccacatcttgttttaaagtgaataaagttcttcaatgagaaaaacacaaagttgcttccc 18072362  T
Q  207 ttaagcaattgtatggataggtattttaagga 238  Q
    || || || |||||| ||||||| ||||||||    
T  18072363 ttgagtaagtgtatgaataggtaatttaagga 18072394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 299
Target Start/End: Complemental strand, 25117001 - 25116811
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaaca-tgagttacatccctt 208  Q
    ||||||||||  ||||||||| ||||| |||||| ||||||||||||  ||||||| ||||| |||||||||||||||||| ||   |||| ||   |||    
T  25117001 atgaaagtgatttcttgtgttgtaagtgttcttgctatacccacatcaagttttatcgtgaa-aattctccaatgagaaaagcacctagttgcaattctt 25116903  T
Q  209 aagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaa-attaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     || || |||||| ||| |||||||||||| |||||||||||| ||| |||||  |  ||||| |||||| |||| ||||||| ||||||||    
T  25116902 gagtaagtgtatgaataagtattttaaggaacacgttctaactttaatggtaacctggacctttaaaaatattcaaagtaaaagtagtataa 25116811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 299
Target Start/End: Complemental strand, 25176092 - 25175902
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaaca-tgagttacatccctt 208  Q
    ||||||||||  ||||||||| ||||| |||||| ||||||||||||  ||||||| ||||| |||||||||||||||||| ||   |||| ||   |||    
T  25176092 atgaaagtgatttcttgtgttgtaagtgttcttgctatacccacatcaagttttatcgtgaa-aattctccaatgagaaaagcacctagttgcaattctt 25175994  T
Q  209 aagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaa-attaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     || || |||||| ||| |||||||||||| |||||||||||| ||| |||||  |  ||||| |||||| |||| ||||||| ||||||||    
T  25175993 gagtaagtgtatgaataagtattttaaggaacacgttctaactttaatggtaacctggacctttaaaaatattcaaagtaaaagtagtataa 25175902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 110 - 190
Target Start/End: Complemental strand, 20439163 - 20439084
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaa 190  Q
    ||||||||||  ||||||||| ||||| |||||| ||||||||||||  ||||||||||||| ||||||||||| ||||||    
T  20439163 atgaaagtgatttcttgtgttgtaagtgttcttgctatacccacatcaagttttattgtgaa-aattctccaatcagaaaa 20439084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 47 - 97
Target Start/End: Complemental strand, 24405744 - 24405694
Alignment:
Q  47 ctacaaaactgtccattaagttttgcaactgtagcagttttagccccccaa 97  Q
    ||||||||||| ||| |||||||||||||||||| ||||||||||||||||    
T  24405744 ctacaaaactgcccactaagttttgcaactgtaggagttttagccccccaa 24405694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 97
Target Start/End: Original strand, 30603680 - 30603729
Alignment:
Q  48 tacaaaactgtccattaagttttgcaactgtagcagttttagccccccaa 97  Q
    |||||||||| ||  ||||||||||||||||||||||||| |||||||||    
T  30603680 tacaaaactgccccctaagttttgcaactgtagcagttttggccccccaa 30603729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 62 - 97
Target Start/End: Complemental strand, 21066572 - 21066537
Alignment:
Q  62 ttaagttttgcaactgtagcagttttagccccccaa 97  Q
    |||||||||||||||||||||||||| |||||||||    
T  21066572 ttaagttttgcaactgtagcagttttggccccccaa 21066537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 94
Target Start/End: Complemental strand, 28446251 - 28446204
Alignment:
Q  47 ctacaaaactgtccattaagttttgcaactgtagcagttttagccccc 94  Q
    ||||||||| ||||  ||||||||||||||||||||||||| ||||||    
T  28446251 ctacaaaaccgtcccctaagttttgcaactgtagcagttttggccccc 28446204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 3333758 - 3333808
Alignment:
Q  47 ctacaaaactgtccattaagttttgcaactgtagcagttttagccccccaa 97  Q
    ||||||||| ||||  |||||||||||| |||||||||||| |||||||||    
T  3333758 ctacaaaaccgtcctctaagttttgcaaatgtagcagttttggccccccaa 3333808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 97
Target Start/End: Original strand, 6130337 - 6130371
Alignment:
Q  63 taagttttgcaactgtagcagttttagccccccaa 97  Q
    ||||||||||||||||||||||||| |||||||||    
T  6130337 taagttttgcaactgtagcagttttggccccccaa 6130371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 97
Target Start/End: Original strand, 19340843 - 19340877
Alignment:
Q  63 taagttttgcaactgtagcagttttagccccccaa 97  Q
    ||||||||||||||||||||||||| |||||||||    
T  19340843 taagttttgcaactgtagcagttttggccccccaa 19340877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 97
Target Start/End: Original strand, 32391801 - 32391835
Alignment:
Q  63 taagttttgcaactgtagcagttttagccccccaa 97  Q
    ||||||||||||||||||||||||| |||||||||    
T  32391801 taagttttgcaactgtagcagttttggccccccaa 32391835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 97
Target Start/End: Complemental strand, 36798407 - 36798373
Alignment:
Q  63 taagttttgcaactgtagcagttttagccccccaa 97  Q
    ||||||||||||||||||||||||| |||||||||    
T  36798407 taagttttgcaactgtagcagttttggccccccaa 36798373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 97
Target Start/End: Original strand, 40276101 - 40276135
Alignment:
Q  63 taagttttgcaactgtagcagttttagccccccaa 97  Q
    ||||||||||||||||||||||||| |||||||||    
T  40276101 taagttttgcaactgtagcagttttggccccccaa 40276135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 3999104 - 3999141
Alignment:
Q  1 gccccctaaccttcacgaagttgtgattttgaccccct 38  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  3999104 gccccctaactttcacgaagttgcgattttgaccccct 3999141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 110 - 299
Target Start/End: Original strand, 11753 - 11943
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaacatgagttacatccctta 209  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||| ||||||||     
T  11753 atgaaagtgaactcttgtgttttaagttttcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaagcaaaagttgcatcccttg 11852  T
Q  210 agcaattgtatggataggtattttaagg-agcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    ||||| |||||| ||||||||||||||| |||||||||||| | ||  ||||  |||||||| |||| | || ||||||||| ||||||||    
T  11853 agcaagtgtatgaataggtattttaaggaagcacgttctaattttagtggtacgttaacctttaaaagtctttagagtaaaagtagtataa 11943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 110 - 299
Target Start/End: Complemental strand, 233645 - 233455
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaacatgagttacatccctta 209  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||| ||||||||     
T  233645 atgaaagtgaactcttgtgttttaagttttcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaagcaaaagttgcatcccttg 233546  T
Q  210 agcaattgtatggataggtattttaagg-agcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    ||||| |||||| ||||||||||||||| |||||||||||| | ||  ||||  |||||||| |||| | || ||||||||| ||||||||    
T  233545 agcaagtgtatgaataggtattttaaggaagcacgttctaattttagtggtacgttaacctttaaaagtctttagagtaaaagtagtataa 233455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 104; Significance: 7e-52; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 113 - 299
Target Start/End: Complemental strand, 17485750 - 17485563
Alignment:
Q  113 aaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataa-ttctccaatgagaaaaacatgagttacatcccttaag 211  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| || ||||||||||||| || ||||| |||||||| ||    
T  17485750 aaagtgaactcttgtgttttaagttttcttgatatacccacatcatgttttattgtgaataaattttccaatgagaaaagcacgagttgcatcccttgag 17485651  T
Q  212 caattgtatggataggtattttaaggagcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     ||||||||| ||| |||||||||||| |||||||| ||||| ||| || ||||||| | ||||||| ||||||||||| ||||||||    
T  17485650 taattgtatgaataagtattttaaggaacacgttctgactctgaagatatattaaccctaaaaaattctcagagtaaaagtagtataa 17485563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 18291377 - 18291506
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat-aattctccaatgagaaaaacatgagttacatccctt 208  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||  |||||| |||||||||||||||||||||  |||| | ||||||    
T  18291377 atgaaagtaaactcttgtgttttaagttttcttgatatacccacatcttgttttaacgtgaataaattctccaatgagaaaaacacaagttgcttccctt 18291476  T
Q  209 aagcaattgtatggataggtattttaagga 238  Q
     || || |||||| ||||||||||||||||    
T  18291477 gagtaagtgtatgaataggtattttaagga 18291506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 110 - 238
Target Start/End: Complemental strand, 15348666 - 15348537
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat-aattctccaatgagaaaaacatgagttacatccctt 208  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||  |||| | |||||||||||||||||||||  |||| | ||||||    
T  15348666 atgaaagtaaactcttgtgttttaagttttcttgatatacccacatcttgttttaaagtgactaaattctccaatgagaaaaacacaagttgcttccctt 15348567  T
Q  209 aagcaattgtatggataggtattttaagga 238  Q
     || || |||||| ||||||||||||||||    
T  15348566 gagtaagtgtatgaataggtattttaagga 15348537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 10630109 - 10630239
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaacatgagttacatccct 207  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||| || |  ||||||  |||||||||||||||||||||| |||| | |||||    
T  10630109 atgaaagtgaactcttgtattttaagttttcttgatatacccacatcttgcttcaaagtgaatacaattctccaatgagaaaaacataagttgcttccct 10630208  T
Q  208 taagcaattgtatggataggtattttaagga 238  Q
    | || || |||||| ||||||||||||||||    
T  10630209 tgagtaagtgtatgaataggtattttaagga 10630239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 110 - 238
Target Start/End: Complemental strand, 45235082 - 45234952
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtatt-cttgatatacccacatcttgttttattgtgaat-aattctccaatgagaaaaacatgagttacatccct 207  Q
    ||||||||||||||||||||||||||| || ||||||||||||||| ||||||||| ||||||| |||||||||||||||||| ||  ||||   |||||    
T  45235082 atgaaagtgaactcttgtgttttaagtctttcttgatatacccacaccttgttttaatgtgaataaattctccaatgagaaaagcacaagttgtttccct 45234983  T
Q  208 taagcaattgtatggataggtattttaagga 238  Q
    |||| || |||||| ||||||||||||||||    
T  45234982 taagtaagtgtatgaataggtattttaagga 45234952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 113 - 299
Target Start/End: Original strand, 15864870 - 15865057
Alignment:
Q  113 aaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaaca-tgagttacatcccttaag 211  Q
    |||||||  ||||||||| ||||| |||||| ||||||||||||  ||||||||||||| |||||||||||||||||| ||   |||| ||  |||||||    
T  15864870 aaagtgatttcttgtgttgtaagtgttcttgctatacccacatcaagttttattgtgaa-aattctccaatgagaaaagcacctagttgcaatccttaag 15864968  T
Q  212 caattgtatggataggtattttaaggagcacgttctaactctaaaggtaa-attaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     || |||||| |||||||||||||||| |||||||||||| ||| ||||| ||  ||| | |||||| |||||||||||| ||||||||    
T  15864969 taagtgtatgaataggtattttaaggaacacgttctaactttaatggtaacatggacccttaaaaatcttcagagtaaaagtagtataa 15865057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 110 - 299
Target Start/End: Complemental strand, 14686626 - 14686436
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaa--aacatgagttacatccct 207  Q
    ||||||||||  ||||||||| ||||| |||||| ||||||||||||  ||||||||||||| |||||||||||||||||  ||| | |||| ||  |||    
T  14686626 atgaaagtgatttcttgtgttgtaagtgttcttgctatacccacatcaagttttattgtgaa-aattctccaatgagaaaagaacct-agttgcaatcct 14686529  T
Q  208 taagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaatt-aaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    |||| || |||||| |||||||||||||||| |||||||||||| ||| ||||| ||  ||| | |||||| |||| ||||||| ||||||||    
T  14686528 taagtaagtgtatgaataggtattttaaggaacacgttctaactttaatggtaacttggacccttaaaaatcttcaaagtaaaagtagtataa 14686436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 238
Target Start/End: Complemental strand, 11497466 - 11497335
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatccc 206  Q
    |||||||  |||||||||||||||||| |||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||   |||| | ||||    
T  11497466 atgaaagcaaactcttgtgttttaagtcttcttgatatacccacatcttgttttaaagtgaataaaattctccaatgagaaaaacacaaagttgcttccc 11497367  T
Q  207 ttaagcaattgtatggataggtattttaagga 238  Q
    || || || |||||| ||||||||||||||||    
T  11497366 ttgagtaaatgtatgaataggtattttaagga 11497335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 13822277 - 13822408
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatccc 206  Q
    |||||||  |||||||||||||||||| |||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||   |||| | ||||    
T  13822277 atgaaagcaaactcttgtgttttaagtcttcttgatatacccacatcttgttttaaagtgaataaaattctccaatgagaaaaacacaaagttgcttccc 13822376  T
Q  207 ttaagcaattgtatggataggtattttaagga 238  Q
    || || || |||||| ||||||||||||||||    
T  13822377 ttgagtaaatgtatgaataggtattttaagga 13822408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 109 - 238
Target Start/End: Original strand, 38426105 - 38426235
Alignment:
Q  109 tatgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat-aattctccaatgagaaaaacatgagttacatccct 207  Q
    ||||||||| |||||||||||||||||| ||  |||||||||||||||||||||||  |||||| |||||||||||||||||  ||  |||| | |||||    
T  38426105 tatgaaagtaaactcttgtgttttaagtttttctgatatacccacatcttgttttaaagtgaataaattctccaatgagaaatgcacaagttgcttccct 38426204  T
Q  208 taagcaattgtatggataggtattttaagga 238  Q
    | || || |||||||||| ||||||||||||    
T  38426205 tgagtaaatgtatggatatgtattttaagga 38426235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 3354013 - 3354142
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat-aattctccaatgagaaaaacatgagttacatccctt 208  Q
    |||||| | |||||||||||||||||| ||| |||||||||||||||||||||||  |||||| |||| ||||||||||||  ||  |||| | ||||||    
T  3354013 atgaaaataaactcttgtgttttaagttttcctgatatacccacatcttgttttaaagtgaataaattatccaatgagaaatgcacaagttgcttccctt 3354112  T
Q  209 aagcaattgtatggataggtattttaagga 238  Q
     || || |||||||||||||||||||||||    
T  3354113 gagtaaatgtatggataggtattttaagga 3354142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 110 - 238
Target Start/End: Complemental strand, 18082310 - 18082181
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat-aattctccaatgagaaaaacatgagttacatccctt 208  Q
    |||||||| |||||||||| ||||||| ||| |||||||||||||||||||||||  |||||| |||||||||||||||||  ||  |||| | ||||||    
T  18082310 atgaaagtaaactcttgtgctttaagttttcctgatatacccacatcttgttttaaagtgaataaattctccaatgagaaatgcacaagttgcttccctt 18082211  T
Q  209 aagcaattgtatggataggtattttaagga 238  Q
     || || |||||||| ||||||||||||||    
T  18082210 gagtaaatgtatggaaaggtattttaagga 18082181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 119 - 238
Target Start/End: Complemental strand, 42710576 - 42710454
Alignment:
Q  119 aactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatcccttaagcaat 215  Q
    |||||||||||||||||| |||||||||||||||||||||||||||  ||||||  ||||||||||| |||||||||   |||| | |||||| || ||     
T  42710576 aactcttgtgttttaagtcttcttgatatacccacatcttgttttaaagtgaataaaattctccaataagaaaaacacaaagttgcttcccttgagtaaa 42710477  T
Q  216 tgtatggataggtattttaagga 238  Q
    |||||| ||||||||||||||||    
T  42710476 tgtatgaataggtattttaagga 42710454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 299
Target Start/End: Complemental strand, 15260945 - 15260752
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaa--taattctccaatgagaaaaaca-tgagttacatccc 206  Q
    ||||||||||  ||||||||| |||||||||||| |||| |||||||  |||||||||||||  ||||||||||||||||||||||   |||| ||  ||    
T  15260945 atgaaagtgatttcttgtgttataagtattcttgctatatccacatcaagttttattgtgaaattaattctccaatgagaaaaacacctagttgcaatcc 15260846  T
Q  207 ttaagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaa-attaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    || || || |||||| |  ||||||||||||| |||||||||||| ||| |||||  |  ||| | |||||| |||||||||||| ||||||||    
T  15260845 ttgagtaagtgtatgaaggggtattttaaggaacacgttctaactttaatggtaacctggacccttaaaaatcttcagagtaaaagtagtataa 15260752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 15253710 - 15253842
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataa--ttctccaatgagaaaaa-catga-gttacatcc 205  Q
    |||||||  |||||||||||||||||| |||||||||||||||||||||||||||  ||||||||  ||||||||||||||||| ||  | ||| | |||    
T  15253710 atgaaagcaaactcttgtgttttaagtcttcttgatatacccacatcttgttttaaagtgaataaaattctccaatgagaaaaaacacaaagttgcttcc 15253809  T
Q  206 cttaagcaattgtatggataggtattttaagga 238  Q
    ||| || || |||||| ||||||||||||||||    
T  15253810 cttgagtaaatgtatgaataggtattttaagga 15253842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 299
Target Start/End: Original strand, 10649769 - 10649959
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaaca-tgagttacatccctt 208  Q
    ||||||||||  ||||||||| |||||||||||  || |||||||||  ||||||||||||| |||||||||||||||||| ||   |||| ||  ||||    
T  10649769 atgaaagtgatttcttgtgttataagtattcttactacacccacatcaagttttattgtgaa-aattctccaatgagaaaagcacctagttgcaatcctt 10649867  T
Q  209 aagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaatt-aaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     || || ||||||  ||||||||||||||| ||||||||| || ||| | ||| ||  ||| | |||||| |||||||||||| ||||||||    
T  10649868 gagtaagtgtatgagtaggtattttaaggaacacgttctagctttaatgttaacttggacccttaaaaatcttcagagtaaaagtagtataa 10649959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 119 - 238
Target Start/End: Original strand, 22110331 - 22110453
Alignment:
Q  119 aactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaata--attctccaatgagaaaaaca-tgagttacatcccttaagcaat 215  Q
    |||||||||||||||||  ||||||||||| |||| ||||||||||  |||||||  ||||||||||||||||||||   |||| | |||||| || ||     
T  22110331 aactcttgtgttttaagccttcttgatataaccacgtcttgttttaaagtgaataagattctccaatgagaaaaacacaaagttgcttcccttgagtaaa 22110430  T
Q  216 tgtatggataggtattttaagga 238  Q
    |||||| ||||||||||||||||    
T  22110431 tgtatgaataggtattttaagga 22110453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 299
Target Start/End: Original strand, 12514518 - 12514593
Alignment:
Q  224 taggtattttaaggagcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    |||||||||| ||||||||||||||||| |||  ||||||| ||| | |||| |||||||||||||| ||||||||    
T  12514518 taggtattttgaggagcacgttctaactttaatagtaaattgaccattaaaagttttcagagtaaaagtagtataa 12514593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 14449340 - 14449390
Alignment:
Q  47 ctacaaaactgtccattaagttttgcaactgtagcagttttagccccccaa 97  Q
    |||||||||||||| ||||||||||||||| || ||||||| |||||||||    
T  14449340 ctacaaaactgtcctttaagttttgcaactataccagttttggccccccaa 14449390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 299
Target Start/End: Complemental strand, 15444317 - 15444233
Alignment:
Q  216 tgtatggataggtattttaaggagcacgttctaactctaaaggtaaatt-aaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    |||||| ||||||||| |||||| |||||||||||| ||| ||||| ||  ||| | |||||| |||||||||||| ||||||||    
T  15444317 tgtatgaataggtattctaaggaacacgttctaactttaatggtaacttggacccttaaaaatcttcagagtaaaagtagtataa 15444233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 53924765 - 53924860
Alignment:
Q  1 gccccctaaccttcacgaagttgtgattttgaccccct--nnnnnnnnctacaaaactgtccattaagttttgcaactgtagcagttttagccccc 94  Q
    |||||||||| ||||||||||||||||||||||||| |           |||||||| ||||  ||||||||||||||||||||||||| ||||||    
T  53924765 gccccctaactttcacgaagttgtgattttgaccccttaagaaaaaaattacaaaaccgtcccctaagttttgcaactgtagcagttttggccccc 53924860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 97
Target Start/End: Original strand, 2654037 - 2654071
Alignment:
Q  63 taagttttgcaactgtagcagttttagccccccaa 97  Q
    ||||||||||||||||||||||||| |||||||||    
T  2654037 taagttttgcaactgtagcagttttggccccccaa 2654071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 97
Target Start/End: Complemental strand, 3658168 - 3658122
Alignment:
Q  51 aaaactgtccattaagttttgcaactgtagcagttttagccccccaa 97  Q
    ||||||||||  ||||||||||||||||||||||||| || ||||||    
T  3658168 aaaactgtcctctaagttttgcaactgtagcagttttggctccccaa 3658122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 21871447 - 21871496
Alignment:
Q  47 ctacaaaactgtccattaagttttgcaactgtagcagttttagccccccaa 97  Q
    |||||||||||||| | |||||||||||||||||||||||| |||| ||||    
T  21871447 ctacaaaactgtccct-aagttttgcaactgtagcagttttggccctccaa 21871496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 21927308 - 21927357
Alignment:
Q  47 ctacaaaactgtccattaagttttgcaactgtagcagttttagccccccaa 97  Q
    |||||||||||||| | |||||||||||||||||||||||| |||| ||||    
T  21927308 ctacaaaactgtccct-aagttttgcaactgtagcagttttggccctccaa 21927357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 97
Target Start/End: Original strand, 43074671 - 43074705
Alignment:
Q  63 taagttttgcaactgtagcagttttagccccccaa 97  Q
    ||||||||||||||||||||||||| |||||||||    
T  43074671 taagttttgcaactgtagcagttttggccccccaa 43074705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 35383783 - 35383820
Alignment:
Q  1 gccccctaaccttcacgaagttgtgattttgaccccct 38  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  35383783 gccccctaactttcacgaagttgtgattttggccccct 35383820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 110 - 299
Target Start/End: Complemental strand, 1092 - 903
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaacatgagttacatccctta 209  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||| ||||||||     
T  1092 atgaaagtgaactcttgtgttttaagttttcgtgatatacccacatcttgttttattgtgaataattctccaatgagaaaagcacaagttgcatcccttg 993  T
Q  210 agcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    |||||  ||||| |||||||||||||||||| |||||||| | ||  |||| ||||||| | |||| | || ||||||||| ||||||||    
T  992 agcaagcgtatgaataggtattttaaggagcgcgttctaattttagtggtatattaacccttaaaagtctttagagtaaaagtagtataa 903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 92; Significance: 1e-44; HSPs: 2)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 110 - 249
Target Start/End: Complemental strand, 13899 - 13760
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaacatgagttacatccctta 209  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||  |||| ||||||||     
T  13899 atgaaagtgaactcttgtgttttaaggattcttgatatacccacatcttgttttattgtgaataattctccaatgagaatagcagaagttgcatcccttc 13800  T
Q  210 agcaattgtatggataggtattttaaggagcacgttctaa 249  Q
    | |||||||||| ||| ||||||| ||||| |||||||||    
T  13799 atcaattgtatgaatatgtatttttaggaggacgttctaa 13760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 110 - 249
Target Start/End: Complemental strand, 17233 - 17094
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaacatgagttacatccctta 209  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||  |||| ||||||||     
T  17233 atgaaagtgaactcttgtgttttaaggattcttgatatacccacatcttgttttattgtgaataattctccaatgagaatagcagaagttgcatcccttc 17134  T
Q  210 agcaattgtatggataggtattttaaggagcacgttctaa 249  Q
    | |||||||||| ||| ||||||| ||||| |||||||||    
T  17133 atcaattgtatgaatatgtatttttaggaggacgttctaa 17094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 91; Significance: 4e-44; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 112 - 249
Target Start/End: Complemental strand, 32401 - 32263
Alignment:
Q  112 gaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaacatgagttacatcccttaag 211  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||| |||||||| ||    
T  32401 gaaagtgaactcttgtgttttaagttttcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaagcacaagttgcatcccttgag 32302  T
Q  212 caattgtatggataggtattttaag-gagcacgttctaa 249  Q
    ||  |||||| ||||||||||||||  ||||||||||||    
T  32301 catgtgtatgaataggtattttaagaaagcacgttctaa 32263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 113 - 299
Target Start/End: Complemental strand, 46057 - 45869
Alignment:
Q  113 aaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaa-ca-tgagttacatcccttaa 210  Q
    |||||||  ||||||||| ||||| |||||  ||||||||||||  ||||||||||||| | ||||||||| ||||||| || | |||| ||  |||| |    
T  46057 aaagtgatttcttgtgttgtaagtgttctttctatacccacatcaagttttattgtgaa-atttctccaataagaaaaagcacttagttgcaatccttta 45959  T
Q  211 gcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaatta-accttcaaaaattttcagagtaaaaatagtataa 299  Q
    | || ||||||  ||||||||||||||| |||||||||||| ||| ||||| ||| ||| | |||||| || ||||||||| ||||||||    
T  45958 gtaagtgtatgagtaggtattttaaggaacacgttctaactttaatggtaacttagacccttaaaaatcttgagagtaaaagtagtataa 45869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 4e-44; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 110 - 299
Target Start/End: Complemental strand, 25371811 - 25371621
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaacatgagttacatccctta 209  Q
    |||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||  |||| ||||||||     
T  25371811 atgaaagtgaacacttgtgttttaagttttcttgataaacccacatcttgttttattgtggataattctccaatgagaaaagcacaagttgcatcccttg 25371712  T
Q  210 agcaattgtatggataggtattttaagg-agcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    ||||| |||||| ||||||| ||||||| |||||||||||| | ||  ||||  |||||||| |||| | || ||||||||| ||||||||    
T  25371711 agcaagtgtatgaataggtactttaaggaagcacgttctaattttagtggtacgttaacctttaaaagtctttagagtaaaagtagtataa 25371621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 110 - 249
Target Start/End: Original strand, 24501456 - 24501596
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat-aattctccaatgagaaaaacatgagttacatccctt 208  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||| |   |||| ||||||||    
T  24501456 atgaaagtgaactcttgtgttttaagtattcttgatatactcacatcttgttttaatgtgaataaattctccaatgagaaaagcccaagttgcatccctt 24501555  T
Q  209 aagcaattgtatggataggtattttaaggagcacgttctaa 249  Q
     |||||||||||| ||||||| |||||| ||||||||||||    
T  24501556 gagcaattgtatgaataggtagtttaagaagcacgttctaa 24501596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 110 - 299
Target Start/End: Original strand, 27630876 - 27631069
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaa--taattctccaatgagaaaaaca--tgagttacatcc 205  Q
    ||||||||||  ||||||||| |||||||||||| ||||||||||||  |||||||||||||  ||||||||||||||||||||||  || ||| ||  |    
T  27630876 atgaaagtgatttcttgtgttataagtattcttgctatacccacatcaagttttattgtgaaattaattctccaatgagaaaaacacctg-gttgcaatc 27630974  T
Q  206 cttaagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaatt-aaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    ||| || || |||||| |||||||||||||||| |||||||||||| ||| ||||| ||  ||| | |||||| |||||||||||| ||||||||    
T  27630975 cttgagtaagtgtatgaataggtattttaaggaacacgttctaactttaatggtaacttggacccttaaaaatcttcagagtaaaagtagtataa 27631069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 110 - 299
Target Start/End: Original strand, 24170692 - 24170882
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaaca-tgagttacatccctt 208  Q
    ||||||||||  ||||||||| ||||| |||||| ||||||||||||  ||||||||||||| |||||||||||||||||| ||   |||| ||  ||||    
T  24170692 atgaaagtgatttcttgtgttgtaagtgttcttgctatacccacatcaagttttattgtgaa-aattctccaatgagaaaagcacctagttgcaatcctt 24170790  T
Q  209 aagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaatt-aaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     || || |||||| |||||||||||||||| |||||||||||| ||| ||||| ||  ||| | |||||| |||||||||||| ||||||||    
T  24170791 gagtaagtgtatgaataggtattttaaggaacacgttctaactttaatggtaacttggacccttaaaaatcttcagagtaaaagtagtataa 24170882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 110 - 238
Target Start/End: Complemental strand, 25145616 - 25145486
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaacatgagttacatccct 207  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||| || |  ||||||  |||||||||||||||||||||  |||| | |||||    
T  25145616 atgaaagtgaactcttgtattttaagttttcttgatatacccacatcttgcttcaaagtgaatacaattctccaatgagaaaaacacaagttgcttccct 25145517  T
Q  208 taagcaattgtatggataggtattttaagga 238  Q
    | || || |||||| ||||||||||||||||    
T  25145516 tgagtaagtgtatgaataggtattttaagga 25145486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 208
Target Start/End: Complemental strand, 25368533 - 25368435
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat-aattctccaatgagaaaaacatgagttacatccctt 208  Q
    ||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||  |||| ||||||||    
T  25368533 atgaaagtgaattcttgtgttt-aactattcttgatatacccacatcttgttttattgtgaataaattcttcaatgagaaaaacacaagttgcatccctt 25368435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 110 - 299
Target Start/End: Complemental strand, 25366608 - 25366415
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaa--taattctccaatgagaaaaaca-tgagttacatccc 206  Q
    ||||||||||  ||||||||| |||||||||||| ||||||||||||   ||||||||||||  ||||||||||||||||||||||   |||| ||  ||    
T  25366608 atgaaagtgatttcttgtgttataagtattcttgctatacccacatcaatttttattgtgaaactaattctccaatgagaaaaacacctagttgcaatcc 25366509  T
Q  207 ttaagcaattgtatggataggtattttaagg-agcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    || || || |||||| ||||||||||||||| |||||||||||| | ||  ||||  |||||||| |||| | || ||||||||| ||||||||    
T  25366508 ttgagtaagtgtatgaataggtattttaaggaagcacgttctaattttagtggtacgttaacctttaaaagtctttagagtaaaagtagtataa 25366415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 113 - 299
Target Start/End: Complemental strand, 23160219 - 23160029
Alignment:
Q  113 aaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaa--taattctccaatgagaaaaaca--tgagttacatccctt 208  Q
    |||||||  ||||||||| |||||||||||| ||||||||||||  |||||||||||||  |||||||||||| |||||||||  || ||| ||  ||||    
T  23160219 aaagtgatttcttgtgttataagtattcttgctatacccacatcaagttttattgtgaaattaattctccaataagaaaaacacctg-gttgcaatcctt 23160121  T
Q  209 aagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaa-attaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     || || |||||| |||||||||||||||| |||||||||||| ||| |||||  |  ||| | |||||| |||||||||||| ||||||||    
T  23160120 gagtaagtgtatgaataggtattttaaggaacacgttctaactttaatggtaacctggacccttaaaaatcttcagagtaaaagtagtataa 23160029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 113 - 299
Target Start/End: Complemental strand, 23571476 - 23571286
Alignment:
Q  113 aaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaa--taattctccaatgagaaaaaca--tgagttacatccctt 208  Q
    |||||||  ||||||||| |||||||||||| ||||||||||||  |||||||||||||  |||||||||||| |||||||||  || ||| ||  ||||    
T  23571476 aaagtgatttcttgtgttataagtattcttgctatacccacatcaagttttattgtgaaattaattctccaataagaaaaacacctg-gttgcaatcctt 23571378  T
Q  209 aagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaa-attaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     || || |||||| |||||||||||||||| |||||||||||| ||| |||||  |  ||| | |||||| |||||||||||| ||||||||    
T  23571377 gagtaagtgtatgaataggtattttaaggaacacgttctaactttaatggtaacctggacccttaaaaatcttcagagtaaaagtagtataa 23571286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 110 - 238
Target Start/End: Complemental strand, 22045512 - 22045381
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatccc 206  Q
    |||||||  |||||||||||||||||| ||||||||||| |||||||||||||||  ||||||  |||||||||||||||||||||   |||| | ||||    
T  22045512 atgaaagcaaactcttgtgttttaagtcttcttgatataaccacatcttgttttaaagtgaataaaattctccaatgagaaaaacacaaagttgcttccc 22045413  T
Q  207 ttaagcaattgtatggataggtattttaagga 238  Q
    || || || |||||| ||||||||||||||||    
T  22045412 ttgagtaaatgtatgaataggtattttaagga 22045381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 25356874 - 25357005
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatccc 206  Q
    |||||||  |||||||||||||||||| ||||||||||| |||||||||||||||  ||||||  |||||||||||||||||||||   |||| | ||||    
T  25356874 atgaaagcaaactcttgtgttttaagtcttcttgatataaccacatcttgttttaaagtgaataaaattctccaatgagaaaaacacaaagttgcttccc 25356973  T
Q  207 ttaagcaattgtatggataggtattttaagga 238  Q
    || || || |||||| ||||||||||||||||    
T  25356974 ttgagtaaatgtatgaataggtattttaagga 25357005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 299
Target Start/End: Original strand, 23647295 - 23647485
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaaca-tgagttacatccctt 208  Q
    ||||||||||||||||||||||||||| |||||| |||| |||||||  |||||||| |||| |||||||||||||||||| ||   | || ||  || |    
T  23647295 atgaaagtgaactcttgtgttttaagtgttcttgctataaccacatcaagttttattctgaa-aattctccaatgagaaaagcacctacttgcaatccct 23647393  T
Q  209 aagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaatt-aaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     || || ||||||  ||||||||||||||| |||||||||||| ||| ||||| ||  ||| | |||||| |||||||||||| ||||||||    
T  23647394 gagtaagtgtatgagtaggtattttaaggaacacgttctaactttaatggtaacttggacccttaaaaatcttcagagtaaaagtagtataa 23647485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 299
Target Start/End: Complemental strand, 26192474 - 26192284
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaaca-tgagttacatccctt 208  Q
    ||||||||||  ||||||||| ||||| |||||| ||||||||||||  ||||||||||||| |||||||||||||||||| ||   |||| ||  ||||    
T  26192474 atgaaagtgatttcttgtgttgtaagtgttcttgctatacccacatcaagttttattgtgaa-aattctccaatgagaaaagcacctagttgcaatcctt 26192376  T
Q  209 aagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaatt-aaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     || || |||||| |||||||||||||| | |||||||||||| ||| ||||| ||  ||| | |||||| || ||||||||| ||||||||    
T  26192375 gagtaagtgtatgaataggtattttaagaaacacgttctaactttaatggtaacttggacccttaaaaatctttagagtaaaagtagtataa 26192284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 119 - 193
Target Start/End: Original strand, 22664459 - 22664535
Alignment:
Q  119 aactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca 193  Q
    |||||||||||||||||| |||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||    
T  22664459 aactcttgtgttttaagtcttcttgatatacccacatcttgttttaaagtgaataaaattctccaatgagaaaaaca 22664535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 110 - 230
Target Start/End: Complemental strand, 24820871 - 24820750
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat-aattctccaatgagaaaaacatgagttacatccctt 208  Q
    |||||||| |||||||||||||||| | ||| |||||||| ||||||||||||||   ||||| ||||||||||||||||| |||  |||| | ||||||    
T  24820871 atgaaagtaaactcttgtgttttaaattttcctgatatactcacatcttgttttaaactgaataaattctccaatgagaaatacacaagttgcttccctt 24820772  T
Q  209 aagcaattgtatggataggtat 230  Q
    ||| || |||||||||||||||    
T  24820771 aagtaaatgtatggataggtat 24820750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 238
Target Start/End: Complemental strand, 12467 - 12337
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatccc 206  Q
    |||||||  ||||||||| |||||||| |||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||   |||| | ||||    
T  12467 atgaaagcaaactcttgt-ttttaagtcttcttgatatacccacatcttgttttaaagtgaataaaattctccaatgagaaaaacacaaagttgcttccc 12369  T
Q  207 ttaagcaattgtatggataggtattttaagga 238  Q
    || || || |||||| ||||||||||||||||    
T  12368 ttgagtaaatgtatgaataggtattttaagga 12337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 17589771 - 17589902
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatccc 206  Q
    |||||||  |||||||||||||||||| ||||||||||| ||||||||||||| |  ||||||  |||||||||||||||||||||   |||| | ||||    
T  17589771 atgaaagcaaactcttgtgttttaagttttcttgatataaccacatcttgtttcaaagtgaataaaattctccaatgagaaaaacacaaagttgcttccc 17589870  T
Q  207 ttaagcaattgtatggataggtattttaagga 238  Q
    || || || |||||| ||||||||||||||||    
T  17589871 ttgagtaaatgtatgaataggtattttaagga 17589902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 238
Target Start/End: Complemental strand, 24796136 - 24796005
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatccc 206  Q
    |||||||  |||||||||||||||||| ||||||||||| ||||||||||||| |  ||||||  |||||||||||||||||||||   |||| | ||||    
T  24796136 atgaaagcaaactcttgtgttttaagtcttcttgatataaccacatcttgtttcaaagtgaataaaattctccaatgagaaaaacacaaagttgcttccc 24796037  T
Q  207 ttaagcaattgtatggataggtattttaagga 238  Q
    || || || |||||| ||||||||||||||||    
T  24796036 ttgagtaaatgtatgaataggtattttaagga 24796005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 119 - 238
Target Start/End: Original strand, 116915 - 117037
Alignment:
Q  119 aactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatcccttaagcaat 215  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||  ||||||  |||||||||||||||||||||   ||||   |||||| || ||     
T  116915 aactcttgtgttttaagtcttcttgatatacccacatcttattttaaagtgaataaaattctccaatgagaaaaacacaaagttgtttcccttgagtaaa 117014  T
Q  216 tgtatggataggtattttaagga 238  Q
    |||||| ||||||||||||||||    
T  117015 tgtatgaataggtattttaagga 117037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 119 - 238
Target Start/End: Original strand, 16775023 - 16775145
Alignment:
Q  119 aactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaata--attctccaatgagaaaaaca-tgagttacatcccttaagcaat 215  Q
    |||||||||||||||||  ||||||||||| |||||||||||||||  |||||||  ||||||||||||||||||||   |||| | |||||| || ||     
T  16775023 aactcttgtgttttaagccttcttgatataaccacatcttgttttaaagtgaataggattctccaatgagaaaaacacaaagttgcttcccttgagtaaa 16775122  T
Q  216 tgtatggataggtattttaagga 238  Q
    |||||| ||||||||||||||||    
T  16775123 tgtatgaataggtattttaagga 16775145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 110 - 299
Target Start/End: Complemental strand, 27769653 - 27769460
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaa--taattctccaatgagaaaaaca-tgagttacatccc 206  Q
    ||||||||||  ||||||||| ||| |||||||| ||||||||||||  |||||||||||||   |||||||||||||||||||||   |||| ||  ||    
T  27769653 atgaaagtgatttcttgtgttataaatattcttgctatacccacatcaagttttattgtgaaataaattctccaatgagaaaaacacctagttgcaatcc 27769554  T
Q  207 ttaagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaa-attaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    || || || ||||||  ||||||||||||||| ||| ||||| || ||| |||||  |  ||| |||||||| |||||||||||| ||||||||    
T  27769553 ttgagtaagtgtatgagtaggtattttaaggaacacattctagctttaatggtaacctggaccctcaaaaatcttcagagtaaaagtagtataa 27769460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 224 - 299
Target Start/End: Complemental strand, 19806359 - 19806284
Alignment:
Q  224 taggtattttaaggagcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    ||||||||||||||||||||||||||||  || |||||||||||| | |||| |||||||||||||| ||||||||    
T  19806359 taggtattttaaggagcacgttctaacttcaatggtaaattaacccttaaaagttttcagagtaaaagtagtataa 19806284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 34679386 - 34679290
Alignment:
Q  1 gccccctaaccttcacgaagttgtgattttgaccccctnnnnnnnnctacaaaactgtccattaagttttgcaactgtagcagttttagccccccaa 97  Q
    |||||||||| |||||||||||||||||||| ||||||        ||||||||| | ||  ||||||||||||||||||||||||| |||||||||    
T  34679386 gccccctaactttcacgaagttgtgattttggccccctaaaaaaaactacaaaaccgccccctaagttttgcaactgtagcagttttggccccccaa 34679290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 224 - 299
Target Start/End: Complemental strand, 24019801 - 24019726
Alignment:
Q  224 taggtattttaaggagcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    |||||||||||||||||||||||||||| ||  |||||||| ||| | |||| |||||||||||||| ||||||||    
T  24019801 taggtattttaaggagcacgttctaactttagtggtaaattgacccttaaaagttttcagagtaaaagtagtataa 24019726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 110 - 238
Target Start/End: Complemental strand, 24517172 - 24517042
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaata--attctccaatgagaaaaacatgagttacatccct 207  Q
    |||||||||||||||| | |||||||| |||| |||||||||||| ||||||| |   ||||||  ||||||||||||||||||||  | || | |||||    
T  24517172 atgaaagtgaactcttttattttaagttttctcgatatacccacaccttgtttcaaaatgaataatattctccaatgagaaaaacacaaattgcttccct 24517073  T
Q  208 taagcaattgtatggataggtattttaagga 238  Q
    | || || |||||| ||| ||||||||||||    
T  24517072 tgagtaagtgtatgaatatgtattttaagga 24517042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 113 - 299
Target Start/End: Complemental strand, 25338958 - 25338773
Alignment:
Q  113 aaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaaca-tgagttacatcccttaag 211  Q
    |||||||  ||||||||||||||| |||||| |||||||||||||||| |||||||||| |||||| |  |||||||| ||   |||| ||    || ||    
T  25338958 aaagtgatttcttgtgttttaagtgttcttgctatacccacatcttgtcttattgtgaa-aattct-ctttgagaaaagcacaaagttgcagtttttgag 25338861  T
Q  212 caattgtatggataggtattttaaggagcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     || ||||||  || |||||| ||||||||||||||||||  || |||||||||||| |  ||| |||||||||||||| ||||||||    
T  25338860 taagtgtatgagtatgtatttgaaggagcacgttctaacttcaatggtaaattaaccctttaaagttttcagagtaaaagtagtataa 25338773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 110 - 299
Target Start/End: Original strand, 24320549 - 24320737
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaa--acatgagttacatccct 207  Q
    ||||||||||  ||||||||||||||| |||||| |||||||||||| | |||||||||||| |||||| |  ||||||||  |||| |||| ||  | |    
T  24320549 atgaaagtgacttcttgtgttttaagtgttcttgctatacccacatcatattttattgtgaa-aattct-ctttgagaaaagcacat-agttgcactctt 24320645  T
Q  208 taagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    | || || ||| | | |||||||||| ||||||||||||||| | ||  |||||||| ||| | |||| |||| ||||||||| ||||||||    
T  24320646 tgagtaaatgtgtaggtaggtattttgaggagcacgttctaattttagtggtaaattgacccttaaaagttttaagagtaaaagtagtataa 24320737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 299
Target Start/End: Original strand, 29955310 - 29955385
Alignment:
Q  224 taggtattttaaggagcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    ||||| |||||||||||||||||||||| ||| |||||||||||  | |||| |||| ||||||||| ||||||||    
T  29955310 taggtgttttaaggagcacgttctaactgtaatggtaaattaactcttaaaagttttaagagtaaaagtagtataa 29955385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 299
Target Start/End: Complemental strand, 25583430 - 25583362
Alignment:
Q  230 ttttaaggagcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    ||||||||||||||||||||||  || |||||||||||| |||||| |||| ||||||||| ||||||||    
T  25583430 ttttaaggagcacgttctaacttcaatggtaaattaacc-tcaaaagttttaagagtaaaagtagtataa 25583362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 193
Target Start/End: Original strand, 27626958 - 27627034
Alignment:
Q  119 aactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataa--ttctccaatgagaaaaaca 193  Q
    |||||||||||||||||  ||||||||||||| |||||||||||||  ||||||||  || | ||||||||||||||    
T  27626958 aactcttgtgttttaagccttcttgatatacctacatcttgttttaaagtgaataaagtttttcaatgagaaaaaca 27627034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 299
Target Start/End: Original strand, 15532272 - 15532364
Alignment:
Q  207 ttaagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    ||||| |||||| | | ||||| ||||||  ||||||||||||||  || |||||||||| | ||||||||||| ||||||||| ||||||||    
T  15532272 ttaagtaattgtgtaggtaggtgttttaaatagcacgttctaacttcaatggtaaattaatcctcaaaaattttaagagtaaaagtagtataa 15532364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 94
Target Start/End: Complemental strand, 6592981 - 6592934
Alignment:
Q  47 ctacaaaactgtccattaagttttgcaactgtagcagttttagccccc 94  Q
    ||||||||||| ||  ||||||||||||||||||||||||| ||||||    
T  6592981 ctacaaaactgccccctaagttttgcaactgtagcagttttggccccc 6592934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 15023134 - 15023036
Alignment:
Q  1 gccccctaaccttcacgaagttgtgattttgaccccct--nnnnnnnnctacaaaactgtccattaagttttgcaactgtagcagttttagccccccaa 97  Q
    |||||||||| |||| ||||||||||||||||||||||          ||||||||| ||||  ||||||||| |||||||||| |||| |||||||||    
T  15023134 gccccctaactttcaagaagttgtgattttgaccccctaagaaaaaaactacaaaaccgtcccctaagttttgtaactgtagcaattttggccccccaa 15023036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 94
Target Start/End: Original strand, 44617802 - 44617845
Alignment:
Q  51 aaaactgtccattaagttttgcaactgtagcagttttagccccc 94  Q
    |||| ||||| |||||||||||||||||||||||||||| ||||    
T  44617802 aaaattgtcccttaagttttgcaactgtagcagttttagtcccc 44617845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 97
Target Start/End: Complemental strand, 6510231 - 6510197
Alignment:
Q  63 taagttttgcaactgtagcagttttagccccccaa 97  Q
    ||||||||||||||||||||||||| |||||||||    
T  6510231 taagttttgcaactgtagcagttttggccccccaa 6510197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 35718903 - 35718857
Alignment:
Q  47 ctacaaaactgtccattaagttttgcaactgtagcagttttagcccc 93  Q
    ||||||||| ||||  ||||||||||||||||||||||||| |||||    
T  35718903 ctacaaaaccgtcccctaagttttgcaactgtagcagttttggcccc 35718857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 97
Target Start/End: Complemental strand, 37431785 - 37431735
Alignment:
Q  47 ctacaaaactgtccattaagttttgcaactgtagcagttttagccccccaa 97  Q
    ||||||||| | || ||||||||||||||||||||| |||| |||||||||    
T  37431785 ctacaaaaccgccccttaagttttgcaactgtagcatttttggccccccaa 37431735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 14943554 - 14943591
Alignment:
Q  1 gccccctaaccttcacgaagttgtgattttgaccccct 38  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  14943554 gccccctaactttcacgaagttgtgattttgacaccct 14943591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 44297628 - 44297676
Alignment:
Q  47 ctacaaaactgtccattaagttttgcaactgtagcagttttagcccccc 95  Q
    ||||||||||| ||  ||||||||| ||||||||||||||| |||||||    
T  44297628 ctacaaaactgccccctaagttttgtaactgtagcagttttggcccccc 44297676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 4e-44; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 110 - 299
Target Start/End: Original strand, 8652408 - 8652598
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaacatgagttacatccctta 209  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||  |||| ||||||||     
T  8652408 atgaaagtgaactcttgtgttttaagttttcttgataaacccacatcttgttttatcgtgaataattctccaatgagaaaagcacaagttgcatcccttg 8652507  T
Q  210 agcaattgtatggataggtattttaagg-agcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    ||||| |||||| ||||||||||||||| ||||| |||||| | ||  ||||  ||||| || |||| | || ||||||||| ||||||||    
T  8652508 agcaagtgtatgaataggtattttaaggaagcacattctaattttagtggtacgttaacttttaaaagtctttagagtaaaattagtataa 8652598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 110 - 299
Target Start/End: Complemental strand, 19876525 - 19876335
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaa--acatgagttacatccct 207  Q
    ||||||||||  ||||||||||||||| |||||| ||||||| ||||||||||||||||||| ||||||||||||||||||  ||||| ||| || || |    
T  19876525 atgaaagtgatttcttgtgttttaagtgttcttgctatacccgcatcttgttttattgtgaaaaattctccaatgagaaaagcacatg-gttgcagcctt 19876427  T
Q  208 taagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    | || || |||||| |||||||||||||||| |||||||||| | ||  |||||||||||| |  ||| |||||||||||||| ||||||||    
T  19876426 tgagtaagtgtatgaataggtattttaaggaacacgttctaattttagtggtaaattaaccctttaaagttttcagagtaaaagtagtataa 19876335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 110 - 299
Target Start/End: Complemental strand, 8948409 - 8948219
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaaca-tgagttacatccctt 208  Q
    ||||||||||  ||||||||||||||| |||||| |||||||||||| |||||||||||||| |||||||||||||||||| || | |||| ||  ||||    
T  8948409 atgaaagtgatttcttgtgttttaagtgttcttgttatacccacatcatgttttattgtgaa-aattctccaatgagaaaagcacttagttgcaatcctt 8948311  T
Q  209 aagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaatta-accttcaaaaattttcagagtaaaaatagtataa 299  Q
     ||||| |||||| |||||||||||||||| |||||||||||| ||| ||||| ||| ||| | |||| | |||||| ||||| ||||||||    
T  8948310 gagcaagtgtatgaataggtattttaaggaacacgttctaactttaatggtaacttagacccttaaaagtcttcagaataaaagtagtataa 8948219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 110 - 299
Target Start/End: Complemental strand, 21785306 - 21785116
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaaca-tgagttacatccctt 208  Q
    ||||||||||  ||||||||| ||||| |||||||||||||||||||  ||||||||||||| |||||||||||||||||| ||   |||| ||  ||||    
T  21785306 atgaaagtgatttcttgtgttgtaagtgttcttgatatacccacatcaagttttattgtgaa-aattctccaatgagaaaagcacctagttgcaatcctt 21785208  T
Q  209 aagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaatt-aaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     || || ||||||  ||||||||||||||| |||||||||||| ||| ||||| ||  ||| | |||||| |||||||||||| ||||||||    
T  21785207 gagtaaatgtatgagtaggtattttaaggaacacgttctaactttaatggtaacttggacccttaaaaatcttcagagtaaaagtagtataa 21785116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 113 - 299
Target Start/End: Original strand, 3989461 - 3989650
Alignment:
Q  113 aaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat-aattctccaatgagaaaaaca-tgagttacatcccttaa 210  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||  |||||| ||||||||||||||||||| |   |||| | |||||| |    
T  3989461 aaagtaaactcttgtgttttaagttttcttgatatacccacatcttgttttaacgtgaataaattctccaatgagaaaaatacaaagttgcttcccttga 3989560  T
Q  211 gcaattgtatggataggtattttaagg-agcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    | || |||||| ||||||||||||||| |   |||||||| | ||  |||| ||| ||||| ||||||| ||| ||||||| ||||||||    
T  3989561 gtaagtgtatgaataggtattttaaggaaatgcgttctaattttagtggtacattgacctttaaaaattctcaaagtaaaagtagtataa 3989650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 119 - 238
Target Start/End: Original strand, 27046246 - 27046368
Alignment:
Q  119 aactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatcccttaagcaat 215  Q
    |||||||||||||||||| |||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||   |||| | |||||| || ||     
T  27046246 aactcttgtgttttaagtcttcttgatatacccacatcttgttttaaagtgaataaaattctccaatgagaaaaacacaaagttgcttcccttgagtaaa 27046345  T
Q  216 tgtatggataggtattttaagga 238  Q
    |||||| ||||||||||||||||    
T  27046346 tgtatgaataggtattttaagga 27046368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 20236830 - 20236961
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatccc 206  Q
    |||||||  |||||||||||||||||| |||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||   |||| | ||||    
T  20236830 atgaaagcaaactcttgtgttttaagtcttcttgatatacccacatcttgttttaaagtgaataaaattctccaatgagaaaaacacaaagttgcttccc 20236929  T
Q  207 ttaagcaattgtatggataggtattttaagga 238  Q
    || || || |||||  ||||||||||||||||    
T  20236930 ttgagtaaatgtataaataggtattttaagga 20236961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 299
Target Start/End: Complemental strand, 52939468 - 52939277
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattc-tccaatgagaaaaacatgagttacatccctt 208  Q
    |||||||| ||||||||||||||||||  || |||||||||||||||||||||||  ||||||||  | ||||||||||||  ||  |||| | ||| ||    
T  52939468 atgaaagtaaactcttgtgttttaagttctcctgatatacccacatcttgttttaaagtgaataaaacctccaatgagaaatgcacaagttgcttccatt 52939369  T
Q  209 aagcaattgtatggataggtattttaaggagca-cgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     || || |||||| ||||||||||||||||    |||||||| | ||| ||||  |||||||| ||||||| ||| ||||||||||||||||    
T  52939368 gagtaaatgtatgaataggtattttaaggaaatgcgttctaattttaatggtacgttaacctttaaaaattctcaaagtaaaaatagtataa 52939277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 110 - 238
Target Start/End: Complemental strand, 21799515 - 21799384
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataa--ttctccaatgagaaaaaca-tgagttacatccc 206  Q
    |||||||  |||||||||||||||||  |||||||||||||||||||||||||||  ||||||||  |||| ||||||||||||||   |||| | ||||    
T  21799515 atgaaagcaaactcttgtgttttaagccttcttgatatacccacatcttgttttaaagtgaataaagttcttcaatgagaaaaacacaaagttgcttccc 21799416  T
Q  207 ttaagcaattgtatggataggtattttaagga 238  Q
    || || || |||||| ||||||| ||||||||    
T  21799415 ttgagtaagtgtatgaataggtaatttaagga 21799384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 110 - 238
Target Start/End: Complemental strand, 17095454 - 17095322
Alignment:
Q  110 atgaaagtgaactcttgtgtttta-agtattcttgatatacccacatcttgttttattgtgaataa--ttctccaatgagaaaaaca-tgagttacatcc 205  Q
    |||||||  ||||||||||||||  ||| ||||||||||||||| |||||||||||  ||||||||  |||| ||||||||||||||   |||| | |||    
T  17095454 atgaaagcaaactcttgtgttttttagtcttcttgatatacccatatcttgttttaaagtgaataaagttcttcaatgagaaaaacacaaagttgcttcc 17095355  T
Q  206 cttaagcaattgtatggataggtattttaagga 238  Q
    ||| || || |||||| ||||||||||||||||    
T  17095354 cttgagtaaatgtatgaataggtattttaagga 17095322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 23891681 - 23891776
Alignment:
Q  4 ccctaaccttcacgaagttgtgattttgaccccctnnnnnnnn--ctacaaaactgtccattaagttttgcaactgtagcagttttagccccccaa 97  Q
    ||||||| |||||||||||||||||||| ||||||          ||||||||| | || |||||||||||||||||||||||||| |||||||||    
T  23891681 ccctaactttcacgaagttgtgattttggccccctaagaaaaaaactacaaaaccgccccttaagttttgcaactgtagcagttttggccccccaa 23891776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 299
Target Start/End: Complemental strand, 16383263 - 16383188
Alignment:
Q  224 taggtattttaaggagcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    |||||||||||||||||||||||||||| ||| ||| |||| ||| | |||| | || ||||||||| ||||||||    
T  16383263 taggtattttaaggagcacgttctaactttaatggtcaattgacccttaaaagtctttagagtaaaagtagtataa 16383188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 45739182 - 45739133
Alignment:
Q  48 tacaaaactgtccattaagttttgcaactgtagcagttttagccccccaa 97  Q
    |||||||||| ||  ||||||||||||||||||||||||| |||||||||    
T  45739182 tacaaaactgccccataagttttgcaactgtagcagttttggccccccaa 45739133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 62 - 93
Target Start/End: Complemental strand, 44436980 - 44436949
Alignment:
Q  62 ttaagttttgcaactgtagcagttttagcccc 93  Q
    ||||||||||||||||||||||||||||||||    
T  44436980 ttaagttttgcaactgtagcagttttagcccc 44436949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 97
Target Start/End: Complemental strand, 17760937 - 17760887
Alignment:
Q  47 ctacaaaactgtccattaagttttgcaactgtagcagttttagccccccaa 97  Q
    ||||||||| | || ||||||||||||| |||||||||||| |||||||||    
T  17760937 ctacaaaaccgccccttaagttttgcaattgtagcagttttggccccccaa 17760887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 42924346 - 42924383
Alignment:
Q  1 gccccctaaccttcacgaagttgtgattttgaccccct 38  Q
    |||| ||||| |||||||||||||||||||||||||||    
T  42924346 gccctctaactttcacgaagttgtgattttgaccccct 42924383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 88; Significance: 3e-42; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 110 - 245
Target Start/End: Original strand, 4312101 - 4312236
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaacatgagttacatccctta 209  Q
    |||||||||||||||| ||||||||||  ||||||| |||||||||||||||||||| ||||||||||||||||||||||| || ||||| ||||||||     
T  4312101 atgaaagtgaactcttttgttttaagttctcttgatgtacccacatcttgttttattatgaataattctccaatgagaaaagcacgagttgcatcccttg 4312200  T
Q  210 agcaattgtatggataggtattttaaggagcacgtt 245  Q
    || ||||||||| |||||||||||||| ||||||||    
T  4312201 agtaattgtatgaataggtattttaagaagcacgtt 4312236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 110 - 299
Target Start/End: Complemental strand, 48802705 - 48802514
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataa-ttctccaatgagaaaaacatgagttacatccctt 208  Q
    ||||||||||| ||||||||||||||| ||||||||| |||| |||| ||||||| ||||||||| |||||||||||||||| ||  |||||||||||||    
T  48802705 atgaaagtgaaatcttgtgttttaagttttcttgataaacccgcatcatgttttaatgtgaataaattctccaatgagaaaagcactagttacatccctt 48802606  T
Q  209 aagcaattgtatggataggtattttaagg-agcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     ||||| |||||| ||||||||||||||| |||||||||||| | ||  ||||  |||||||| |||| | || ||||||||| ||||||||    
T  48802605 gagcaagtgtatgaataggtattttaaggaagcacgttctaattttagtggtacgttaacctttaaaagtctttagagtaaaagtagtataa 48802514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 110 - 299
Target Start/End: Complemental strand, 8782849 - 8782659
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat-aattctccaatgagaaaaacatgagttacatccctt 208  Q
    ||||||||||| |||||||||||||||  ||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||  |||| || |||||    
T  8782849 atgaaagtgaattcttgtgttttaagtgatcttgctatacccacatcttgttttattgtgaataaattctccaatgagaaaagcacaagttgcacccctt 8782750  T
Q  209 aagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     ||||| |||||| ||| |||||||||| |||||||||||| | ||  |||| ||||||| | |||| | || ||||||||| || |||||    
T  8782749 gagcaagtgtatgaataagtattttaagtagcacgttctaattttagtggtacattaacccttaaaagtctttagagtaaaagtaatataa 8782659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 110 - 299
Target Start/End: Original strand, 20107653 - 20107844
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat-aattctccaatgagaaaaacatgagttacatccctt 208  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||  |||| | ||||||    
T  20107653 atgaaagtgaactcttgtattttaagttttcttgatatacccacatcttgttttaatgtgaataaattctccaatgagaaaagcacaagttgcttccctt 20107752  T
Q  209 aagcaattgtatggataggtattttaagg-agcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     || || |||||| ||| ||||||||||| | |||||||||| | ||  ||||  |||||||| |||| | || ||||||||| ||||||||    
T  20107753 gagtaagtgtatgaataagtattttaaggaaacacgttctaattttagtggtacgttaacctttaaaagtctttagagtaaaagtagtataa 20107844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 110 - 299
Target Start/End: Original strand, 18286982 - 18287175
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaa--taattctccaatgagaaaaaca--tgagttacatcc 205  Q
    ||||||||||  ||||||||| |||||||||||| ||||||||||||  |||||||||||||  ||||||||||||||||||||||  || ||| ||  |    
T  18286982 atgaaagtgatttcttgtgttataagtattcttgctatacccacatcaagttttattgtgaaattaattctccaatgagaaaaacacctg-gttgcaatc 18287080  T
Q  206 cttaagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaa-attaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    ||| || || |||||| |||||||||||||||| |||||||||||| ||| |||||  |  ||| | |||||| |||||||||||| ||||||||    
T  18287081 cttgagtaagtgtatgaataggtattttaaggaacacgttctaactttaatggtaacctggacccttaaaaatcttcagagtaaaagtagtataa 18287175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 261
Target Start/End: Complemental strand, 4792267 - 4792116
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaaca-tgagttacatccctt 208  Q
    ||||||||||  ||||||||||||||| |||||| |||||||||||| ||||||||| |||| |||||||||||||||||| || | |||| ||  ||||    
T  4792267 atgaaagtgatttcttgtgttttaagtgttcttgctatacccacatcatgttttattatgaa-aattctccaatgagaaaagcacttagttgcaatcctt 4792169  T
Q  209 aagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaa 261  Q
     ||||| ||||||  ||||||||||| ||| |||||||||||| ||| |||||    
T  4792168 gagcaagtgtatgagtaggtattttacggaacacgttctaactttaatggtaa 4792116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 23514430 - 23514561
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaac-atgagttacatccc 206  Q
    |||||||  |||||||||||||||||| |||||||||||||||||||||||||||  ||||||  |||||||||||||||||||| |  |||| | ||||    
T  23514430 atgaaagcaaactcttgtgttttaagtcttcttgatatacccacatcttgttttaaagtgaatacaattctccaatgagaaaaacaaaaagttgcttccc 23514529  T
Q  207 ttaagcaattgtatggataggtattttaagga 238  Q
    || || || |||||| ||||||||||||||||    
T  23514530 ttgagtaaatgtatgaataggtattttaagga 23514561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 299
Target Start/End: Original strand, 5396494 - 5396684
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaacat-gagttacatccctt 208  Q
    ||||||||||  ||||||||| ||||| |||||| ||||||||||||  ||||||||||||| |||||||||||||||||| |||  |||| ||  ||||    
T  5396494 atgaaagtgatttcttgtgttgtaagtgttcttgctatacccacatcaagttttattgtgaa-aattctccaatgagaaaagcatctagttgcaatcctt 5396592  T
Q  209 aagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaatt-aaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     || || |||||| |||||||||||||||| ||| |||||||| ||| ||||| ||  ||| | |||||| |||| ||||||| ||||||||    
T  5396593 gagtaagtgtatgaataggtattttaaggaacacattctaactttaatggtaacttggacccttaaaaatcttcaaagtaaaagtagtataa 5396684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 299
Target Start/End: Original strand, 13657286 - 13657477
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat-aattctccaatgagaaaaacatgagttacatccctt 208  Q
    |||||||||||||||||| |||| ||| ||||||||||||||||||||||||| |   ||||| ||||||||||||||||| |||  |||| | ||||||    
T  13657286 atgaaagtgaactcttgtatttttagttttcttgatatacccacatcttgtttcaaaatgaataaattctccaatgagaaatacacaagttgcttccctt 13657385  T
Q  209 aagcaattgtatg-gataggtattttaaggagcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     || || |||||| |  || |||||| |||| |||||||| | | | |||||||||||||| ||||||||  ||| ||||||| ||||||||    
T  13657386 gagtaaatgtatgagtaagatatttttaggaacacgttctgattattaaggtaaattaaccctcaaaaatcctcaaagtaaaagtagtataa 13657477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 119 - 238
Target Start/End: Complemental strand, 16150325 - 16150203
Alignment:
Q  119 aactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatcccttaagcaat 215  Q
    |||||||||||||||||| |||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||   |||| | |||||| || ||     
T  16150325 aactcttgtgttttaagtcttcttgatatacccacatcttgttttaaagtgaataaaattctccaatgagaaaaacacaaagttgcttcccttgagtaaa 16150226  T
Q  216 tgtatggataggtattttaagga 238  Q
    |||||| ||||||||||||||||    
T  16150225 tgtatgaataggtattttaagga 16150203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 110 - 235
Target Start/End: Complemental strand, 10432594 - 10432468
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat-aattctccaatgagaaaaacatgagttacatccctt 208  Q
    ||||||||  ||||||||||||||||| |||||||||||||||||||||||||||  |||| | |||||||||||||||||||||  |||| | ||||||    
T  10432594 atgaaagtatactcttgtgttttaagttttcttgatatacccacatcttgttttaaagtgactaaattctccaatgagaaaaacacaagttgcttccctt 10432495  T
Q  209 aagcaattgtatggataggtattttaa 235  Q
     || || |||||| ||| |||||||||    
T  10432494 gagtaagtgtatgaataagtattttaa 10432468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 8717228 - 8717359
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatccc 206  Q
    |||||||  |||||||||||||||||| |||||||||||||||||||||||||||  ||||||  || ||||||||||||||||||   |||| | ||||    
T  8717228 atgaaagcaaactcttgtgttttaagtcttcttgatatacccacatcttgttttaaagtgaataaaaatctccaatgagaaaaacacaaagttgcttccc 8717327  T
Q  207 ttaagcaattgtatggataggtattttaagga 238  Q
    || || || |||||| ||||||||||||||||    
T  8717328 ttgagtaaatgtatgaataggtattttaagga 8717359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 14550459 - 14550590
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatccc 206  Q
    |||||||  |||||||||||||||||| |||||||||||||||||||||||||||  ||||||  || ||||||||||||||||||   |||| | ||||    
T  14550459 atgaaagcaaactcttgtgttttaagtcttcttgatatacccacatcttgttttaaagtgaataaaactctccaatgagaaaaacacaaagttgcttccc 14550558  T
Q  207 ttaagcaattgtatggataggtattttaagga 238  Q
    || || || |||||| ||||||||||||||||    
T  14550559 ttgagtaaatgtatgaataggtattttaagga 14550590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 299
Target Start/End: Original strand, 825004 - 825194
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaaca-tgagttacatccctt 208  Q
    ||||||||||  ||||||||| ||| | |||||| ||||||||||||  ||||||||||||| |||||||||||||||||| ||   |||| ||  ||||    
T  825004 atgaaagtgatttcttgtgttgtaattgttcttgctatacccacatcaagttttattgtgaa-aattctccaatgagaaaagcacctagttgcaatcctt 825102  T
Q  209 aagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaatt-aaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     || || | |||| |||||||||||||||| |||||||||||| ||| ||||| ||  ||| | |||||| |||||||||||| ||||||||    
T  825103 gagtaagtttatgaataggtattttaaggaacacgttctaactttaatggtaacttggacccttaaaaatcttcagagtaaaagtagtataa 825194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 236
Target Start/End: Original strand, 13355599 - 13355726
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat-aattctccaatgagaaaaacatgagttacatccctt 208  Q
    |||||| | ||| |||||||||||||| ||||||||||||||||||||| |||||  |||||| |||||||||||||||||||||  |||| | ||||||    
T  13355599 atgaaattaaacacttgtgttttaagttttcttgatatacccacatctttttttaaagtgaataaattctccaatgagaaaaacacaagttgcttccctt 13355698  T
Q  209 aagcaattgtatggataggtattttaag 236  Q
     || || |||||  ||||||||||||||    
T  13355699 gagtaagtgtataaataggtattttaag 13355726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 299
Target Start/End: Complemental strand, 16326618 - 16326428
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaaca-tgagttacatccctt 208  Q
    ||||||||||  | ||||||| ||||| |||||| ||||||||||||  ||||||||||||| |||||||||||||||||| ||   |||| ||  ||||    
T  16326618 atgaaagtgattttttgtgttgtaagtgttcttgctatacccacatcaagttttattgtgaa-aattctccaatgagaaaagcacctagttgcaatcctt 16326520  T
Q  209 aagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaatt-aaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     || || |||||| |||||||||||||||| |||||||||||| ||| ||||| ||  ||| | |||||| |||||| ||||| ||||||||    
T  16326519 gagtaagtgtatgaataggtattttaaggaacacgttctaactttaatggtaacttggacccttaaaaatcttcagattaaaagtagtataa 16326428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 109 - 299
Target Start/End: Complemental strand, 15207419 - 15207228
Alignment:
Q  109 tatgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaaca-tgagttacatccct 207  Q
    |||||||||||  |||  |||| ||||| |||||| ||||||||||||  ||||||||||||| |||||||||||||||||| ||   |||| ||  |||    
T  15207419 tatgaaagtgatttctcatgttgtaagtgttcttgctatacccacatcaagttttattgtgaa-aattctccaatgagaaaagcacctagttgcaatcct 15207321  T
Q  208 taagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaatt-aaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    | || || |||||  |||||||||||||||| |||||||||||| ||| ||||| ||  ||||| |||||| |||| ||||||| ||||||||    
T  15207320 tgagtaagtgtataaataggtattttaaggaacacgttctaactttaatggtaacttggacctttaaaaatcttcaaagtaaaagtagtataa 15207228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 119 - 238
Target Start/End: Original strand, 13673228 - 13673350
Alignment:
Q  119 aactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatcccttaagcaat 215  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||  ||||||  ||||||||||||||||| |||   |||| | |||||| || ||     
T  13673228 aactcttgtgttttaagtcttcttgatataaccacatcttgttttaaagtgaataaaattctccaatgagaaatacacaaagttgcttcccttgagtaaa 13673327  T
Q  216 tgtatggataggtattttaagga 238  Q
    |||||| ||||||||||||||||    
T  13673328 tgtatgaataggtattttaagga 13673350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 119 - 238
Target Start/End: Complemental strand, 18594109 - 18593987
Alignment:
Q  119 aactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatcccttaagcaat 215  Q
    ||||||||||||||| || ||||||||||| |||||||||||||||  ||||||  |||||||||||||||||||||   |||| | |||||| || ||     
T  18594109 aactcttgtgttttaggtcttcttgatataaccacatcttgttttaaagtgaataaaattctccaatgagaaaaacacaaagttgcttcccttgagtaaa 18594010  T
Q  216 tgtatggataggtattttaagga 238  Q
    |||||| ||||||||||||||||    
T  18594009 tgtatgaataggtattttaagga 18593987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 119 - 238
Target Start/End: Original strand, 18617575 - 18617697
Alignment:
Q  119 aactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatcccttaagcaat 215  Q
    ||||||||||||||| || ||||||||||| |||||||||||||||  ||||||  |||||||||||||||||||||   |||| | |||||| || ||     
T  18617575 aactcttgtgttttaggtcttcttgatataaccacatcttgttttaaagtgaataaaattctccaatgagaaaaacacaaagttgcttcccttgagtaaa 18617674  T
Q  216 tgtatggataggtattttaagga 238  Q
    |||||| ||||||||||||||||    
T  18617675 tgtatgaataggtattttaagga 18617697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 261
Target Start/End: Original strand, 15065150 - 15065304
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaa--taattctccaatgagaaaaaca-tgagttacatccc 206  Q
    ||||||||||  ||||||||| |||||||||||| ||||||||||||   ||||||||||||  |||||||||||||| |||| ||   |||| ||  ||    
T  15065150 atgaaagtgatttcttgtgttataagtattcttgctatacccacatcaaattttattgtgaaattaattctccaatgaaaaaagcacctagttgcaatcc 15065249  T
Q  207 ttaagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaa 261  Q
    || || || ||||||  ||||||||||||||| ||||||||| |||||| |||||    
T  15065250 ttgagtaagtgtatgagtaggtattttaaggaacacgttctagctctaatggtaa 15065304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 110 - 236
Target Start/End: Original strand, 12566381 - 12566502
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaacatgagttacatccctta 209  Q
    |||||||| ||||||| |||||||||| |||||||||||||||||||||||||     | |  |||||||||||||||||||||  |||| | ||||||     
T  12566381 atgaaagtaaactcttatgttttaagttttcttgatatacccacatcttgttt-----tcataaattctccaatgagaaaaacacaagttgcttcccttg 12566475  T
Q  210 agcaattgtatggataggtattttaag 236  Q
    || || |||||| ||| ||||||||||    
T  12566476 agtaagtgtatgaatatgtattttaag 12566502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 110 - 248
Target Start/End: Complemental strand, 14222554 - 14222413
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaa--taattctccaatgagaaaaaca-tgagttacatccc 206  Q
    ||||||||||  ||||||||| |||||||||||| ||||||||| ||  |||||||||||||  ||||||||||||||||||| ||   |||| ||  ||    
T  14222554 atgaaagtgatttcttgtgttataagtattcttgctatacccacgtcaagttttattgtgaaattaattctccaatgagaaaagcacctagttgcaatcc 14222455  T
Q  207 ttaagcaattgtatggataggtattttaaggagcacgttcta 248  Q
    || || || ||||||  ||||||||||||||| |||||||||    
T  14222454 ttgagtaagtgtatgagtaggtattttaaggaacacgttcta 14222413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 539611 - 539547
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataa 174  Q
    |||||||  |||||||||||||||||| |||||||||||||||||||||||||||  ||||||||    
T  539611 atgaaagcaaactcttgtgttttaagtcttcttgatatacccacatcttgttttaaagtgaataa 539547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 110 - 261
Target Start/End: Complemental strand, 15917615 - 15917464
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaaca-tgagttacatccctt 208  Q
    ||||||||||  ||| ||||| ||||| |||||| ||||||||||||   | |||||||||| |||||||||||||||||| ||   |||| ||  ||||    
T  15917615 atgaaagtgatttctcgtgttgtaagtgttcttgctatacccacatcaattgttattgtgaa-aattctccaatgagaaaagcacctagttgcaatcctt 15917517  T
Q  209 aagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaa 261  Q
     || || |||||| |||||||||||||||| |||||||||||| ||| |||||    
T  15917516 gagtaagtgtatgaataggtattttaaggaacacgttctaactttaatggtaa 15917464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 248
Target Start/End: Original strand, 27290714 - 27290855
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaa--taattctccaatgagaaaaaca-tgagttacatccc 206  Q
    ||||||||||  ||||||||| |||||||| ||| |||||||||| |  |||||||||||||   |||||||||||||||||| ||  ||||| ||  ||    
T  27290714 atgaaagtgatttcttgtgttataagtatttttgctatacccacaccaagttttattgtgaaataaattctccaatgagaaaagcaccgagttgcaatcc 27290813  T
Q  207 ttaagcaattgtatggataggtattttaaggagcacgttcta 248  Q
    || || || ||||||  ||||||||||||||| |||||||||    
T  27290814 ttgagtaagtgtatgagtaggtattttaaggaacacgttcta 27290855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 174
Target Start/End: Original strand, 9582285 - 9582340
Alignment:
Q  119 aactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataa 174  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||  ||||||||    
T  9582285 aactcttgtgttttaagtcttcttgatatatccacatcttgttttaaagtgaataa 9582340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 17876404 - 17876358
Alignment:
Q  48 tacaaaactgtccattaagttttgcaactgtagcagttttagccccc 94  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||    
T  17876404 tacaaaaccgtccattaagttttgcaactgtagcagttttggccccc 17876358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 11927761 - 11927698
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaata 173  Q
    |||||||| ||||||||||||||||||  || | |||||||||||||||||||||  |||||||    
T  11927761 atgaaagtaaactcttgtgttttaagttctcctaatatacccacatcttgttttaaagtgaata 11927698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 35250411 - 35250317
Alignment:
Q  3 cccctaaccttcacgaagttgtgattttgaccccctnnnnnnnnctacaaaactgtccattaagttttgcaactgtagcagttttagccccccaa 97  Q
    |||||||| || || |||||| ||||||||||||||        || |||||||| ||  ||||||||||||||||||||||||| |||||||||    
T  35250411 cccctaactttgacaaagttgcgattttgaccccctaaaaaaaactgcaaaactgccccctaagttttgcaactgtagcagttttggccccccaa 35250317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 171
Target Start/End: Complemental strand, 6713792 - 6713743
Alignment:
Q  122 tcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaa 171  Q
    ||||||||||| |||||||||| |||||||||| | ||||||||||||||    
T  6713792 tcttgtgttttgagtattcttgctatacccacaccatgttttattgtgaa 6713743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 20185211 - 20185114
Alignment:
Q  1 gccccctaaccttcacgaagttgtgattttgaccccctnnnnnnnn-ctacaaaactgtccattaagttttgcaactgtagcagttttagccccccaa 97  Q
    |||||||||| |||||||||||| ||||||||||||||         ||||||||| | |   ||||||||||||||||||||||||| |||||||||    
T  20185211 gccccctaactttcacgaagttgcgattttgaccccctaaaaaaaaactacaaaaccgcctcctaagttttgcaactgtagcagttttggccccccaa 20185114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 296
Target Start/End: Complemental strand, 6713690 - 6713618
Alignment:
Q  224 taggtattttaaggagcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagta 296  Q
    ||||||||||||||| ||| |||||||| ||  |||||||| ||| | |||| |||||||||||||| |||||    
T  6713690 taggtattttaaggaacacattctaactttagtggtaaattgacccttaaaagttttcagagtaaaagtagta 6713618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 299
Target Start/End: Complemental strand, 4326810 - 4326735
Alignment:
Q  224 taggtattttaaggagcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    |||||||||||||||||||||||||| | ||  |||||||| ||| | |||| |||||| ||||||| || |||||    
T  4326810 taggtattttaaggagcacgttctaagtttagtggtaaattgacccttaaaagttttcaaagtaaaagtaatataa 4326735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 94
Target Start/End: Original strand, 15107059 - 15107106
Alignment:
Q  47 ctacaaaactgtccattaagttttgcaactgtagcagttttagccccc 94  Q
    |||||||| ||||| ||||||||||||||| |||||||||| ||||||    
T  15107059 ctacaaaattgtcccttaagttttgcaactatagcagttttggccccc 15107106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 16466468 - 16466405
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaata 173  Q
    |||||| | ||||||||||||||||||  || | |||||||||||||||||||||  |||||||    
T  16466468 atgaaattaaactcttgtgttttaagttctcctaatatacccacatcttgttttaaagtgaata 16466405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 94
Target Start/End: Complemental strand, 36903518 - 36903471
Alignment:
Q  47 ctacaaaactgtccattaagttttgcaactgtagcagttttagccccc 94  Q
    |||||||||||  |  ||||||||||||||||||||||||||||||||    
T  36903518 ctacaaaactgcaccctaagttttgcaactgtagcagttttagccccc 36903471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 97
Target Start/End: Complemental strand, 28472610 - 28472576
Alignment:
Q  63 taagttttgcaactgtagcagttttagccccccaa 97  Q
    ||||||||||||||||||||||||| |||||||||    
T  28472610 taagttttgcaactgtagcagttttggccccccaa 28472576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 87
Target Start/End: Complemental strand, 23746136 - 23746096
Alignment:
Q  47 ctacaaaactgtccattaagttttgcaactgtagcagtttt 87  Q
    ||||||||| ||||  |||||||||||||||||||||||||    
T  23746136 ctacaaaaccgtcctctaagttttgcaactgtagcagtttt 23746096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 87
Target Start/End: Original strand, 36580340 - 36580380
Alignment:
Q  47 ctacaaaactgtccattaagttttgcaactgtagcagtttt 87  Q
    ||||||||| ||||  |||||||||||||||||||||||||    
T  36580340 ctacaaaaccgtcccctaagttttgcaactgtagcagtttt 36580380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0402 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 110 - 249
Target Start/End: Original strand, 7158 - 7298
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaacatgagttacatccctta 209  Q
    ||||||| ||| ||||||||||||||| | |||||||||| |||||||||||||||||||||||||||| ||||||| ||| ||  |||| ||||||||     
T  7158 atgaaagagaattcttgtgttttaagtttccttgatatacacacatcttgttttattgtgaataattctgcaatgaggaaagcacaagttgcatcccttg 7257  T
Q  210 agcaattgtatggataggta-ttttaaggagcacgttctaa 249  Q
    || ||||||||| ||| ||| ||||||||||||||||||||    
T  7258 aggaattgtatgaatatgtacttttaaggagcacgttctaa 7298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 110 - 299
Target Start/End: Original strand, 10781 - 10971
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataa-ttctccaatgagaaaaacatgagttacatccctt 208  Q
    ||||||||||||||||||  ||||||| ||||||||||||||||||||| ||| |  |||||||| |||||||||||||||| ||  |||| | ||||||    
T  10781 atgaaagtgaactcttgtaatttaagttttcttgatatacccacatcttttttcaaagtgaataaattctccaatgagaaaagcacaagttgcttccctt 10880  T
Q  209 aagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     || || |||||| |||| ||||||||||| ||| |||| ||| | |||||||||||||| | | ||||| ||| ||||||| ||||||||    
T  10881 gagtaaatgtatgaatagatattttaaggaacacattctgactattaaggtaaattaaccctaagaaattctcaaagtaaaagtagtataa 10971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 110 - 238
Target Start/End: Complemental strand, 9172 - 9043
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat-aattctccaatgagaaaaacatgagttacatccctt 208  Q
    |||||| | |||||||||||||||||| |||||||||||||||||||||||||||  |||||| |||||||||||||||||||||  |||| | ||||||    
T  9172 atgaaattaaactcttgtgttttaagttttcttgatatacccacatcttgttttaaagtgaataaattctccaatgagaaaaacacaagttgcttccctt 9073  T
Q  209 aagcaattgtatggataggtattttaagga 238  Q
     || || |||||| ||||||||||||||||    
T  9072 gagtaagtgtatgaataggtattttaagga 9043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 110 - 299
Target Start/End: Complemental strand, 51344 - 51152
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat-aattctccaatgagaaaaaca-tgagttacatccct 207  Q
    |||||||| |||||||||| ||||||| ||||| |||||||||||||||||||||  |||||| |||||||||||||||||| ||   |||| ||  |||    
T  51344 atgaaagtaaactcttgtgctttaagttttctttatatacccacatcttgttttaaagtgaataaattctccaatgagaaaagcacctagttgcaatcct 51245  T
Q  208 taagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaatt-aaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    | || || |||||| ||||||||||||||||  ||||||||||| ||| ||||| ||  ||| | |||||| |||||||||||| ||||||||    
T  51244 tgagtaagtgtatgaataggtattttaaggaatacgttctaactttaatggtaacttggacccttaaaaatcttcagagtaaaagtagtataa 51152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 1e-28; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 110 - 299
Target Start/End: Original strand, 22101773 - 22101966
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaa--taattctccaatgagaaaaaca--tgagttacatcc 205  Q
    ||||||||||  ||||||||| |||||||||||| ||||||||||||  |||||||||||||  ||||||||||||||||||||||  || ||| ||  |    
T  22101773 atgaaagtgatttcttgtgttataagtattcttgctatacccacatcaagttttattgtgaaattaattctccaatgagaaaaacacctg-gttgcaatc 22101871  T
Q  206 cttaagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaa-attaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    ||| || || |||||| |||||||||||||||| |||||||||||| ||| |||||  |  ||| | |||||| |||||||||||| ||||||||    
T  22101872 cttgagtaagtgtatgaataggtattttaaggaacacgttctaactttaatggtaacctggacccttaaaaatcttcagagtaaaagtagtataa 22101966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 110 - 299
Target Start/End: Original strand, 22369323 - 22369513
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaaca-tgagttacatccctt 208  Q
    ||||||||||  ||||||||| ||||| |||||| ||||||||||||  ||||||||||||| |||||||||||||||||| ||   |||| ||  ||||    
T  22369323 atgaaagtgatttcttgtgttgtaagtgttcttgctatacccacatcaagttttattgtgaa-aattctccaatgagaaaagcacctagttgcaatcctt 22369421  T
Q  209 aagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaatt-aaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     || || |||||| |||||||||||||||| |||||||||||| ||| ||||| ||  ||| | |||||| |||||||||||| ||||||||    
T  22369422 gagtaagtgtatgaataggtattttaaggaacacgttctaactttaatggtaacttggacccttaaaaatcttcagagtaaaagtagtataa 22369513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 238
Target Start/End: Complemental strand, 21099643 - 21099512
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatccc 206  Q
    |||||||  |||||||||||||||||| |||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||   |||| | ||||    
T  21099643 atgaaagcaaactcttgtgttttaagtcttcttgatatacccacatcttgttttaaagtgaataaaattctccaatgagaaaaacacaaagttgcttccc 21099544  T
Q  207 ttaagcaattgtatggataggtattttaagga 238  Q
    || || || |||||| ||||||||||||||||    
T  21099543 ttgagtaaatgtatgaataggtattttaagga 21099512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 21381455 - 21381586
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatccc 206  Q
    |||||||  |||||||||||||||||| |||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||   |||| | ||||    
T  21381455 atgaaagcaaactcttgtgttttaagtcttcttgatatacccacatcttgttttaaagtgaataaaattctccaatgagaaaaacacaaagttgcttccc 21381554  T
Q  207 ttaagcaattgtatggataggtattttaagga 238  Q
    || || || |||||| ||||||||||||||||    
T  21381555 ttgagtaaatgtatgaataggtattttaagga 21381586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 21955437 - 21955568
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatccc 206  Q
    |||||||  |||||||||||||||||| |||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||   |||| | ||||    
T  21955437 atgaaagcaaactcttgtgttttaagtcttcttgatatacccacatcttgttttaaagtgaataaaattctccaatgagaaaaacacaaagttgcttccc 21955536  T
Q  207 ttaagcaattgtatggataggtattttaagga 238  Q
    || || || |||||| ||||||||||||||||    
T  21955537 ttgagtaaatgtatgaataggtattttaagga 21955568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 299
Target Start/End: Original strand, 20001679 - 20001869
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaaca-tgagttacatccctt 208  Q
    ||||||||||  ||||||||| ||||| |||||| ||||||||||||  ||||||||||||| |||||||||||||||||||||   |||| ||  ||||    
T  20001679 atgaaagtgatttcttgtgttgtaagtgttcttgctatacccacatcaagttttattgtgaa-aattctccaatgagaaaaacacctagttgcaatcctt 20001777  T
Q  209 aagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaa-attaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     || || |||||| |||||||||||||||| ||||||||| || ||| |||||  |  ||| | |||||| |||||||||||| ||||||||    
T  20001778 gagtaagtgtatgaataggtattttaaggaacacgttctagctttaatggtaacctggacccttaaaaatcttcagagtaaaactagtataa 20001869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 110 - 299
Target Start/End: Complemental strand, 22100492 - 22100299
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaa--taattctccaatgagaaaaaca-tgagttacatccc 206  Q
    ||||||||||  ||||||||| |||||||||||| ||||||||||||  |||||||||||||  ||||||||||||||||||| ||   |||| ||  ||    
T  22100492 atgaaagtgatttcttgtgttataagtattcttgctatacccacatcaagttttattgtgaaattaattctccaatgagaaaagcacctagttgcaatcc 22100393  T
Q  207 ttaagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaa-attaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    || || || ||||||  ||||||||||||||| ||||||||| || ||| |||||  | |||| | |||||| |||||||||||| ||||||||    
T  22100392 ttgagtaagtgtatgagtaggtattttaaggaacacgttctagctttaatggtaacctgaacccttaaaaatcttcagagtaaaagtagtataa 22100299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 17620104 - 17620234
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaacatgagttacatccct 207  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||| || |  ||||||  ||||||||||||| |||||||  |||| | |||||    
T  17620104 atgaaagtgaactcttgtattttaagttttcttgatatacccacatcttgcttcaaagtgaatacaattctccaatgataaaaacacaagttgcttccct 17620203  T
Q  208 taagcaattgtatggataggtattttaagga 238  Q
    | || || |||||| ||| ||||||||||||    
T  17620204 tgagtaagtgtatgaataagtattttaagga 17620234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 299
Target Start/End: Original strand, 19766909 - 19767099
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaaca-tgagttacatccctt 208  Q
    ||||||||||  ||||||||| ||||| |||||| ||||||||||||  ||||||||||||| |||||||||||||||||| ||   |||| ||  ||||    
T  19766909 atgaaagtgatttcttgtgttgtaagtgttcttgctatacccacatcaagttttattgtgaa-aattctccaatgagaaaagcacctagttgcaatcctt 19767007  T
Q  209 aagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaatt-aaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     || || |||||| |||||||||||||||| ||| |||||||| ||| ||||| ||  ||| | ||||||  ||||||||||| ||||||||    
T  19767008 gagtaagtgtatgaataggtattttaaggaacacattctaactttaatggtaacttggacccttaaaaatcatcagagtaaaagtagtataa 19767099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 238
Target Start/End: Complemental strand, 20039840 - 20039710
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtga--ataattctccaatgagaaaaacatgagttacatccct 207  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||| || |  ||||  | |||||||||||||||||||||  || | | |||||    
T  20039840 atgaaagtgaactcttgtattttaagttttcttgatatacccacatcttgcttcaaagtgattacaattctccaatgagaaaaacacaagctgcttccct 20039741  T
Q  208 taagcaattgtatggataggtattttaagga 238  Q
    | || || |||||| ||||||||||||||||    
T  20039740 tgagtaagtgtatgaataggtattttaagga 20039710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 165 - 275
Target Start/End: Original strand, 20375207 - 20375318
Alignment:
Q  165 ttgtgaataa-ttctccaatgagaaaaacatgagttacatcccttaagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaat 263  Q
    |||||||||| |||||||||||||||| ||  |||| |||||||| ||||| |||||| ||||||||||||||||||||||||||| | ||  |||||||    
T  20375207 ttgtgaataaattctccaatgagaaaagcacaagttgcatcccttgagcaagtgtatgaataggtattttaaggagcacgttctaattttagtggtaaat 20375306  T
Q  264 taaccttcaaaa 275  Q
    ||||||| ||||    
T  20375307 taacctttaaaa 20375318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 295
Target Start/End: Complemental strand, 22034392 - 22034203
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaa--taattctccaatgagaaaaaca-tgagttacatccc 206  Q
    ||||||||||  ||||||||| |||||||||||| ||||||||||||  |||||||||||||  ||||||||||||||||||| ||   |||| ||  ||    
T  22034392 atgaaagtgatttcttgtgttataagtattcttgctatacccacatcaagttttattgtgaaattaattctccaatgagaaaagcacctagttgcaatcc 22034293  T
Q  207 ttaagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaatt-aaccttcaaaaattttcagagtaaaaatagt 295  Q
    || || || ||||||  ||||||||||||||| ||||||||| || ||| ||||| ||  ||| | |||||| |||||||||||| ||||    
T  22034292 ttgagtaagtgtatgagtaggtattttaaggaacacgttctagctttaatggtaacttggacccttaaaaatcttcagagtaaaagtagt 22034203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 110 - 238
Target Start/End: Complemental strand, 21854631 - 21854501
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaacatgagttacatccct 207  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||| || || |  ||||||  |||||||||||||||||||||  |||| | |||||    
T  21854631 atgaaagtgaactcttgtattttaagttttcttgatatacccacatcatgcttcaaagtgaatacaattctccaatgagaaaaacacaagttgcttccct 21854532  T
Q  208 taagcaattgtatggataggtattttaagga 238  Q
    | |  || | |||| ||||||||||||||||    
T  21854531 tgattaagtatatgaataggtattttaagga 21854501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 8313830 - 8313961
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataa--ttctccaatgagaaaaaca-tgagttacatccc 206  Q
    |||||||  |||||||||||||||||  |||||||||||||||||||||||||||  ||||||||  |||| ||||||||||||||   |||| | ||||    
T  8313830 atgaaagcaaactcttgtgttttaagccttcttgatatacccacatcttgttttaaagtgaataaagttcttcaatgagaaaaacacaaagttgcttccc 8313929  T
Q  207 ttaagcaattgtatggataggtattttaagga 238  Q
    || || || |||||| ||||||| ||||||||    
T  8313930 ttgagtaagtgtatgaataggtaatttaagga 8313961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 113 - 299
Target Start/End: Complemental strand, 11347790 - 11347603
Alignment:
Q  113 aaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaaca-tgagttacatcccttaag 211  Q
    |||||||  ||||||||| |||||||||||| ||||||||||||  ||||||||||||| |||||||||||||||| | ||   |||| ||  |||| ||    
T  11347790 aaagtgatttcttgtgttgtaagtattcttgctatacccacatcaagttttattgtgaa-aattctccaatgagaatagcacctagttgcaatccttgag 11347692  T
Q  212 caattgtatggataggtattttaaggagcacgttctaactctaaaggtaa-attaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     || |||||| |||||||||||||||| || |||||| || ||| |||||  |  ||| | |||||| |||||||||||| ||||||||    
T  11347691 taagtgtatgaataggtattttaaggaacaagttctagctttaatggtaacctggacccttaaaaatcttcagagtaaaagtagtataa 11347603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 110 - 193
Target Start/End: Complemental strand, 8323700 - 8323615
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca 193  Q
    |||||||  |||||||||||||||||| ||||||||||| |||||||||||||||  ||||||  ||||||||||| |||||||||    
T  8323700 atgaaagcaaactcttgtgttttaagtcttcttgatataaccacatcttgttttaaagtgaataaaattctccaataagaaaaaca 8323615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 110 - 299
Target Start/End: Original strand, 21830395 - 21830588
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaa--taattctccaatgagaaaaaca-tgagttacatccc 206  Q
    ||||||||||  ||||||||| ||||| |||||| ||||||||||||  |||||||||||||  ||||||||||||||||||| ||   |||| ||  ||    
T  21830395 atgaaagtgatttcttgtgttgtaagtgttcttgctatacccacatcaagttttattgtgaaattaattctccaatgagaaaagcacctagttgcaatcc 21830494  T
Q  207 ttaagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaa-attaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    || || || ||||||  ||||||||||||||| | ||||||| || ||| |||||  |  ||| | |||||| |||||||||||| ||||||||    
T  21830495 ttgagtaagtgtatgagtaggtattttaaggaacgcgttctagctttaatggtaacctggacccttaaaaatcttcagagtaaaagtagtataa 21830588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 119 - 238
Target Start/End: Original strand, 23910812 - 23910935
Alignment:
Q  119 aactcttgtgttttaagtattcttgatatacccacatcttgttttattgtga---ataattctccaatgagaaaaaca-tgagttacatcccttaagcaa 214  Q
    |||||||||||||||||| |||||||||||||||||||||||||||  || |   | |||||||||||||||||||||   |||| | |||||| || ||    
T  23910812 aactcttgtgttttaagtcttcttgatatacccacatcttgttttaaagtaaaataaaattctccaatgagaaaaacacaaagttgcttcccttgagtaa 23910911  T
Q  215 ttgtatggataggtattttaagga 238  Q
     |||||| ||| ||||||||||||    
T  23910912 atgtatgaataagtattttaagga 23910935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 20711830 - 20711960
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaata--attctccaatgagaaaaacatgagttacatccct 207  Q
    |||||||||||||||| | |||||||| |||| |||||||||||| ||||||| |   ||||||  |||||||||||||| |||||  | || | |||||    
T  20711830 atgaaagtgaactcttttattttaagttttctcgatatacccacaacttgtttcaaaatgaataatattctccaatgagataaacacaaattgcttccct 20711929  T
Q  208 taagcaattgtatggataggtattttaagga 238  Q
    | || || |||||| ||||||||||||||||    
T  20711930 tgagtaagtgtatgaataggtattttaagga 20711960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 138 - 261
Target Start/End: Original strand, 23674939 - 23675062
Alignment:
Q  138 ttcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaaca-tgagttacatcccttaagcaattgtatggataggtattttaag 236  Q
    |||||| ||||||||||||  ||||||||||||| |||||||||||||||||||||   |||| ||  |||| ||  | |||||| ||||||||||||||    
T  23674939 ttcttgctatacccacatcaagttttattgtgaa-aattctccaatgagaaaaacacctagttgcaatccttgagtgagtgtatgaataggtattttaag 23675037  T
Q  237 gagcacgttctaactctaaaggtaa 261  Q
    || ||||||||| || ||| |||||    
T  23675038 gaacacgttctagctttaatggtaa 23675062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 16419461 - 16419397
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataa 174  Q
    |||||||| ||||||||||||||||||  || | |||||||||||||||||||||  ||||||||    
T  16419461 atgaaagtaaactcttgtgttttaagttctccttatatacccacatcttgttttaaagtgaataa 16419397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 35213049 - 35213145
Alignment:
Q  1 gccccctaaccttcacgaagttgtgattttgaccccctnnnnnnnnctacaaaactgtccattaagttttgcaactgtagcagttttagccccccaa 97  Q
    |||| ||||| || || |||||| ||||||||||||||        ||||||||||| || |||||||||||||||||| ||||||| |||||||||    
T  35213049 gcccactaactttgacaaagttgcgattttgaccccctaaaaaaaactacaaaactgccccttaagttttgcaactgtaacagttttggccccccaa 35213145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 299
Target Start/End: Complemental strand, 21942291 - 21942100
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat-aattctccaatgagaaaaacatgagttacatccctt 208  Q
    |||||||| ||||||||||||||||||  || | |||||||||||||||||||||  | |||| ||  ||||||||||| |  ||  |||| | ||||||    
T  21942291 atgaaagtaaactcttgtgttttaagttctcctaatatacccacatcttgttttaaagcgaataaaacctccaatgagatatgcacaagttgcttccctt 21942192  T
Q  209 aagcaattgtatggataggtattttaagg-agcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     || || |||||| ||||||||| ||||| |   |||||||| | ||  ||||  |||||||| ||||||| ||| ||||||||| ||||||    
T  21942191 gagtaaatgtatgaataggtattctaaggaaatgcgttctaattttagtggtacgttaacctttaaaaattctcaaagtaaaaatggtataa 21942100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 300
Target Start/End: Original strand, 22903925 - 22904001
Alignment:
Q  224 taggtattttaaggagcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataat 300  Q
    |||||||||||||||||||||||||||| ||  |||||||| ||  | |||| |||||| ||||||| || ||||||    
T  22903925 taggtattttaaggagcacgttctaactttagtggtaaattgactcttaaaagttttcaaagtaaaagtaatataat 22904001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 97
Target Start/End: Original strand, 17070989 - 17071023
Alignment:
Q  63 taagttttgcaactgtagcagttttagccccccaa 97  Q
    ||||||||||||||||||||||||| |||||||||    
T  17070989 taagttttgcaactgtagcagttttggccccccaa 17071023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 97
Target Start/End: Complemental strand, 17577283 - 17577249
Alignment:
Q  63 taagttttgcaactgtagcagttttagccccccaa 97  Q
    ||||||||||||||||||||||||| |||||||||    
T  17577283 taagttttgcaactgtagcagttttggccccccaa 17577249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 30539055 - 30539105
Alignment:
Q  47 ctacaaaactgtccattaagttttgcaactgtagcagttttagccccccaa 97  Q
    ||||||||||| ||  |||||||| |||||||||||||||| |||||||||    
T  30539055 ctacaaaactgccccctaagttttacaactgtagcagttttggccccccaa 30539105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0566 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0566
Description:

Target: scaffold0566; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 110 - 299
Target Start/End: Original strand, 1978 - 2168
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaaca-tgagttacatccctt 208  Q
    ||||||||||  ||||||||| ||||| |||||||||||||||||||  ||||||||||||| |||||||||||||||||| ||   |||| ||  ||||    
T  1978 atgaaagtgatttcttgtgttgtaagtgttcttgatatacccacatcaagttttattgtgaa-aattctccaatgagaaaagcacctagttgcaatcctt 2076  T
Q  209 aagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaatt-aaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     || || |||||| ||| |||||||||||| |||||||||||| ||| ||||| ||  ||| | |||||| |||||||||||| ||||||||    
T  2077 gagtaagtgtatgaataagtattttaaggaacacgttctaactttaatggtaacttggacccttaaaaatcttcagagtaaaagtagtataa 2168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 122 - 299
Target Start/End: Original strand, 11908 - 12086
Alignment:
Q  122 tcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaaca-tgagttacatcccttaagcaattgtat 220  Q
    ||||||||||||||| |||| | ||||||||||||  ||||||||||||| |||||||||||||||||| || | |||  ||  |||| ||||| |||||    
T  11908 tcttgtgttttaagtgttctggctatacccacatcaagttttattgtgaa-aattctccaatgagaaaagcacttagtcgcaatccttgagcaagtgtat 12006  T
Q  221 ggataggtattttaaggagcacgttctaactctaaaggtaaatta-accttcaaaaattttcagagtaaaaatagtataa 299  Q
    |  ||||||||||||||| |||||||||||| ||| ||||| ||| ||| | |||||| |||||||||||| ||||||||    
T  12007 gagtaggtattttaaggaacacgttctaactttaatggtaacttagacccttaaaaatattcagagtaaaagtagtataa 12086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 64; Significance: 5e-28; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 110 - 236
Target Start/End: Complemental strand, 252720 - 252593
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat-aattctccaatgagaaaaacatgagttacatccctt 208  Q
    |||||||| |||||||||||||||||| ||| |||||||||||||||||||||||  |||||| |||||||||||||||||  ||  |||| | ||||||    
T  252720 atgaaagtaaactcttgtgttttaagttttcctgatatacccacatcttgttttaaagtgaataaattctccaatgagaaatgcacaagttgcttccctt 252621  T
Q  209 aagcaattgtatggataggtattttaag 236  Q
     || || |||||||||||||||||||||    
T  252620 gagtaaatgtatggataggtattttaag 252593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 110 - 162
Target Start/End: Complemental strand, 355346 - 355294
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttt 162  Q
    |||||||||||||||||| |||| ||| |||| ||||||||||||||||||||    
T  355346 atgaaagtgaactcttgtatttttagttttctcgatatacccacatcttgttt 355294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 299
Target Start/End: Original strand, 161206 - 161397
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaa-ca-tgagttacatccct 207  Q
    ||||||||||  ||||||||||||||| |||||| ||||||||||||  ||||||||||||| ||||||||||||||||||| || | |||| ||  |||    
T  161206 atgaaagtgatttcttgtgttttaagtgttcttgctatacccacatcaagttttattgtgaa-aattctccaatgagaaaaagcacttagttgcaatcct 161304  T
Q  208 taagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaatt-aaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    | || || ||||||  ||||||||||||||| || ||||||||| ||| ||||| ||  ||| | |||||| |||||||||||| ||||||||    
T  161305 tgagtaagtgtatgagtaggtattttaaggaacaagttctaactttaatggtaacttggacccttaaaaatcttcagagtaaaagtagtataa 161397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 171
Target Start/End: Original strand, 171532 - 171593
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaa 171  Q
    ||||||||||  |||||| |||||||| |||||| |||||||||||||| ||||| ||||||    
T  171532 atgaaagtgatttcttgtattttaagtgttcttgctatacccacatctttttttaatgtgaa 171593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 116010 - 116139
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataa-ttctccaatgagaaaaacatgagttacatccctt 208  Q
    |||||||| |||||||||||||||||| ||| |||||||||||||||||||||||  |||||||| |||||||||||||||  ||  |||| | ||||||    
T  116010 atgaaagtaaactcttgtgttttaagttttcctgatatacccacatcttgttttaaagtgaataagttctccaatgagaaatgcacaagttgcttccctt 116109  T
Q  209 aagcaattgtatggataggtattttaagga 238  Q
     || || ||| |||||||||||||| ||||    
T  116110 gagtaaatgtgtggataggtatttttagga 116139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 120314 - 120443
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataa-ttctccaatgagaaaaacatgagttacatccctt 208  Q
    |||||||| |||||||||||||||||| ||| |||||||||||||||||||||||  |||||||| |||||||||||||||  ||  |||| | ||||||    
T  120314 atgaaagtaaactcttgtgttttaagttttcctgatatacccacatcttgttttaaagtgaataagttctccaatgagaaatgcacaagttgcttccctt 120413  T
Q  209 aagcaattgtatggataggtattttaagga 238  Q
     || || ||| |||||||||||||| ||||    
T  120414 gagtaaatgtgtggataggtatttttagga 120443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 12849 - 12980
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatccc 206  Q
    |||||||  |||||||||||||||||| ||||||||||| |||||||||||||||  ||||||  |||||||||||||||||||||   |||| | ||||    
T  12849 atgaaagcaaactcttgtgttttaagtcttcttgatataaccacatcttgttttaaagtgaataaaattctccaatgagaaaaacacaaagttgcttccc 12948  T
Q  207 ttaagcaattgtatggataggtattttaagga 238  Q
    || || || |||||| ||||||||||||||||    
T  12949 ttgagtaaatgtatgaataggtattttaagga 12980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 7374 - 7504
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaacatgagttacatccct 207  Q
    |||||||||||||||||| | |||||| |||||||||||||||||||||| || |   |||||  |||||||||||||||||||||  |||| | |||||    
T  7374 atgaaagtgaactcttgtatcttaagttttcttgatatacccacatcttgattcaaaatgaatgaaattctccaatgagaaaaacacaagttgcttccct 7473  T
Q  208 taagcaattgtatggataggtattttaagga 238  Q
    | || || |||||| ||||||||||||||||    
T  7474 tgagtaaatgtatgaataggtattttaagga 7504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0656 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0656
Description:

Target: scaffold0656; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 122 - 299
Target Start/End: Complemental strand, 3358 - 3180
Alignment:
Q  122 tcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaacatg-agttacatcccttaagcaattgtat 220  Q
    ||||||||| | ||| |||||| ||||||||||||  ||||||||||||| |||||||||||||||||| ||   |||| ||  |||| || || |||||    
T  3358 tcttgtgttgtgagtgttcttgctatacccacatcaagttttattgtgaa-aattctccaatgagaaaagcacctagttgcaatccttgagtaagtgtat 3260  T
Q  221 ggataggtattttaaggagcacgttctaactctaaaggtaaatt-aaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    | |||||||||||||||| |||||||||||| ||| ||||| ||  ||| | |||||| |||||||||||| ||||||||    
T  3259 gaataggtattttaaggaacacgttctaactttaatggtaacttggacccttaaaaatcttcagagtaaaagtagtataa 3180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 238
Target Start/End: Complemental strand, 17396 - 17266
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtga--ataattctccaatgagaaaaacatgagttacatccct 207  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||| || |  ||||  | |||||||||||||||||||||  || | | |||||    
T  17396 atgaaagtgaactcttgtattttaagttttcttgatatacccacatcttgcttcaaagtgattacaattctccaatgagaaaaacacaagctgcttccct 17297  T
Q  208 taagcaattgtatggataggtattttaagga 238  Q
    | || || |||||| ||||||||||||||||    
T  17296 tgagtaagtgtatgaataggtattttaagga 17266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 299
Target Start/End: Original strand, 205 - 396
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat-aattctccaatgagaaaaacatgagttacatccctt 208  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||||||  |||||| ||  |||||||||||||  ||  |||| | ||||||    
T  205 atgaaagtgaactcttgtgttttaagttctcctgatatacccacatcttgttttaaagtgaataaaacctccaatgagaaatgcacaagttgcttccctt 304  T
Q  209 aagcaattgtatggataggtattttaagg-agcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     || || |||||| ||||||||||||||| |   |||||||| | ||  ||||  |||||| | ||||||| ||| ||||||||||||||||    
T  305 gagtaaatgtatgaataggtattttaaggaaatgcgttctaattttagtggtacgttaaccattaaaaattctcaaagtaaaaatagtataa 396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 119 - 238
Target Start/End: Original strand, 122741 - 122863
Alignment:
Q  119 aactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatcccttaagcaat 215  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||  ||||||  |||||||||||||||||||||   |||| | |||||| || ||     
T  122741 aactcttgtgttttaagtcttcttgatatacccacgtcttgttttaaagtgaataaaattctccaatgagaaaaacacaaagttgcttcccttgagtaaa 122840  T
Q  216 tgtatggataggtattttaagga 238  Q
    |||||| ||||||||||||||||    
T  122841 tgtatgaataggtattttaagga 122863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 110 - 230
Target Start/End: Complemental strand, 19037 - 18916
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat-aattctccaatgagaaaaacatgagttacatccctt 208  Q
    |||||||| |||||||||||||||| | ||| |||||||| ||||||||||||||   ||||| ||||||||||||||||| |||  |||| | ||||||    
T  19037 atgaaagtaaactcttgtgttttaaattttcctgatatactcacatcttgttttaaactgaataaattctccaatgagaaatacacaagttgcttccctt 18938  T
Q  209 aagcaattgtatggataggtat 230  Q
    ||| || |||||||||||||||    
T  18937 aagtaaatgtatggataggtat 18916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 113 - 299
Target Start/End: Original strand, 142 - 329
Alignment:
Q  113 aaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaaca-tgagttacatcccttaag 211  Q
    |||||||  ||||||||| ||||| |||||  ||||||||||||  ||||||||||||| |||||||||||||||||  ||   |||| ||  |||| ||    
T  142 aaagtgatttcttgtgttgtaagtgttctttctatacccacatcaagttttattgtgaa-aattctccaatgagaaaggcacctagttgcaatccttgag 240  T
Q  212 caattgtatggataggtattttaaggagcacgttctaactctaaaggtaa-attaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     || |||||| |||||||||||||||| |||||||||||| ||| ||||| ||  ||| | |||||| |||||||||||| ||||||||    
T  241 taagtgtatgaataggtattttaaggaacacgttctaactttaatggtaacatggacccttaaaaatcttcagagtaaaagtagtataa 329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1225 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold1225
Description:

Target: scaffold1225; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 110 - 299
Target Start/End: Original strand, 973 - 1166
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataat---tctccaatgagaaaaacatga-gttacatcc 205  Q
    ||||||||||| ||||||||||||||| |||||| | |||  |||||||||||||||||||| ||    | | || |||||||| ||  | ||| |||||    
T  973 atgaaagtgaattcttgtgttttaagtgttcttgttgtactgacatcttgttttattgtgaaaaaaaaatattcactgagaaaagcacaaagttgcatcc 1072  T
Q  206 cttaagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    ||| ||||| ||||||  |||||||||||||||||| ||||||| | ||  |||| ||||||| | |||||| || ||||||||| ||||||||    
T  1073 cttgagcaagtgtatgagtaggtattttaaggagcatgttctaattttagtggtacattaacccttaaaaatctttagagtaaaagtagtataa 1166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 119 - 238
Target Start/End: Original strand, 411 - 533
Alignment:
Q  119 aactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatcccttaagcaat 215  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||  ||||||  |||||||||||||||||||||   |||| | |||||  || ||     
T  411 aactcttgtgttttaagtcttcttgatataaccacatcttgttttaaagtgaataaaattctccaatgagaaaaacacaaagttgcttccctagagtaaa 510  T
Q  216 tgtatggataggtattttaagga 238  Q
    |||||| ||||||||||||||||    
T  511 tgtatgaataggtattttaagga 533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 110 - 299
Target Start/End: Original strand, 9941 - 10131
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaaca-tgagttacatccctt 208  Q
    ||||||||||  ||||||||| ||||||| |||| ||||||||||||  ||||||||||||| |||||||||| ||||||| ||   |||| ||  ||||    
T  9941 atgaaagtgatttcttgtgttataagtatgcttgctatacccacatcaagttttattgtgaa-aattctccaaagagaaaagcacctagttgcaatcctt 10039  T
Q  209 aagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaa-attaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     || || |||||| |||||||||||||||| ||||||||| || ||| |||||  |  ||| | |||||| |||||||||||| ||||||||    
T  10040 gagtaagtgtatgaataggtattttaaggaacacgttctagctttaatggtaacctggacccttaaaaatcttcagagtaaaagtagtataa 10131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 110 - 299
Target Start/End: Complemental strand, 22991 - 22801
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaaca-tgagttacatccctt 208  Q
    ||||||||||  ||||||||| ||||| || ||| ||||||| ||||  ||||||||||||| |||||||||||||||||| ||   |||| ||  ||||    
T  22991 atgaaagtgatttcttgtgttgtaagtgtttttgctataccctcatcaagttttattgtgaa-aattctccaatgagaaaagcacctagttgcaatcctt 22893  T
Q  209 aagcaattgtatggataggtattttaaggagcacgttctaactctaaaggtaaatt-aaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     || || |||||| |||||||||||||||| |||||||||||  ||| ||||| ||  ||| | |||||| |||||||||||| ||||||||    
T  22892 gagtaagtgtatgaataggtattttaaggaacacgttctaaccttaatggtaacttggacccttaaaaatcttcagagtaaaagtagtataa 22801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 122 - 299
Target Start/End: Original strand, 29880 - 30058
Alignment:
Q  122 tcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaaca-tgagttacatcccttaagcaattgtat 220  Q
    ||||||||| ||||| |||||| ||||||||||||  ||||||||||||| |||||||||||||||||| ||   |||| ||  |||| || || |||||    
T  29880 tcttgtgttgtaagtgttcttgctatacccacatcaagttttattgtgaa-aattctccaatgagaaaagcacctagttgcaatccttgagtaagtgtat 29978  T
Q  221 ggataggtattttaaggagcacgttctaactctaaaggtaa-attaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    | |||||||||||||||| ||||||||| || ||| |||||  |  ||| | |||||| |||||||||||| ||||||||    
T  29979 gaataggtattttaaggaacacgttctagctttaatggtaacctggacccttaaaaatcttcagagtaaaagtagtataa 30058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 110 - 238
Target Start/End: Complemental strand, 12294 - 12166
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaaca-tgagttacatccctt 208  Q
    ||||||||||  ||||||||| ||||| |||||| |||||||||||| |||||||||||||| |||||||||||||||||| ||   |||| ||  ||||    
T  12294 atgaaagtgatttcttgtgttgtaagtgttcttgctatacccacatcatgttttattgtgaa-aattctccaatgagaaaagcacctagttgcaatcctt 12196  T
Q  209 aagcaattgtatggataggtattttaagga 238  Q
     || || |||||| ||||||||||||||||    
T  12195 gagtaagtgtatgaataggtattttaagga 12166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 110 - 189
Target Start/End: Original strand, 9557 - 9637
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat-aattctccaatgagaaa 189  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||| |   ||||| |||||||||||||||||    
T  9557 atgaaagtaaactcttgtgttttaagttttcttgatatacccacatcttgtttcaaaatgaataaattctccaatgagaaa 9637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 110 - 238
Target Start/End: Complemental strand, 4462 - 4332
Alignment:
Q  110 atgaaagtgaactcttgtgttttaa-gtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaacatgagttacatccc 206  Q
    |||||||| ||||||||| |||||| || ||||||||||||||||||||||||| |   |||||  |||||||||||||||||||||  |||| | ||||    
T  4462 atgaaagtaaactcttgtattttaaagttttcttgatatacccacatcttgtttcaaaatgaatgaaattctccaatgagaaaaacacaagttgcttccc 4363  T
Q  207 ttaagcaattgtatggataggtattttaagga 238  Q
    ||||| || |||||  ||||||||||||||||    
T  4362 ttaagtaagtgtat-aataggtattttaagga 4332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 110 - 188
Target Start/End: Original strand, 5963 - 6040
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaa 188  Q
    ||||||||||  ||||||||| |||||||||||| ||||||||||||  ||||||||||||| ||||||||||||||||    
T  5963 atgaaagtgatttcttgtgttgtaagtattcttgctatacccacatcaagttttattgtgaa-aattctccaatgagaa 6040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 110 - 236
Target Start/End: Complemental strand, 35955 - 35826
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat--aattctccaatgagaaaaaca-tgagttacatccc 206  Q
    ||||||||||||||||   |||||||| ||||||||||||||||||||||||| |   |||||  |||||||||||||||||||||   |||| | ||||    
T  35955 atgaaagtgaactctttcattttaagttttcttgatatacccacatcttgtttcaaaatgaatgaaattctccaatgagaaaaacacaaagttgcttccc 35856  T
Q  207 ttaagcaattgtatggataggtattttaag 236  Q
    || || || |||||| ||||||||||||||    
T  35855 ttgagtaaatgtatgaataggtattttaag 35826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 110 - 189
Target Start/End: Original strand, 44813 - 44894
Alignment:
Q  110 atgaaagtgaactcttgtgttttaa-gtattcttgatatacccacatcttgttttattgtgaat-aattctccaatgagaaa 189  Q
    |||||||| |||||||||||||||| || ||| |||||||||||||||||||||||  |||||| |||||||||||||||||    
T  44813 atgaaagtaaactcttgtgttttaaagttttcctgatatacccacatcttgttttaaagtgaataaattctccaatgagaaa 44894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 110 - 189
Target Start/End: Original strand, 52202 - 52283
Alignment:
Q  110 atgaaagtgaactcttgtgttttaa-gtattcttgatatacccacatcttgttttattgtgaat-aattctccaatgagaaa 189  Q
    |||||||| |||||||||||||||| || ||| |||||||||||||||||||||||  |||||| |||||||||||||||||    
T  52202 atgaaagtaaactcttgtgttttaaagttttcctgatatacccacatcttgttttaaagtgaataaattctccaatgagaaa 52283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 110 - 237
Target Start/End: Original strand, 10515 - 10644
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaa-taattctccaatg-agaaaaacatgagttacatccct 207  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||| |||||  ||||| ||||||| ||||| | ||||| |  |||| | |||||    
T  10515 atgaaagtaaactcttgtgttttaagttttcttgatatacccacatcttattttaaagtgaattaattctacaatgtaaaaaaaaacaagttgcttccct 10614  T
Q  208 taagcaattgtatggataggtattttaagg 237  Q
    | || || |||||| |||||||||| ||||    
T  10615 tgagtaagtgtatgaataggtatttcaagg 10644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 110 - 190
Target Start/End: Original strand, 8106 - 8185
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaa 190  Q
    ||||||||||  ||| ||||| ||||| |||||||||||||||||||  ||||||||||||| ||||||||||||||||||    
T  8106 atgaaagtgatttctcgtgttgtaagtgttcttgatatacccacatcaagttttattgtgaa-aattctccaatgagaaaa 8185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 110 - 238
Target Start/End: Complemental strand, 1090 - 960
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaata--attctccaatgagaaaaacatgagttacatccct 207  Q
    |||||||||||||||| | |||||||| |||| |||||||||||| ||||||| |   ||||||  ||||||||||||||||||||  | || | |||||    
T  1090 atgaaagtgaactcttttattttaagttttctcgatatacccacaccttgtttcaaaatgaataatattctccaatgagaaaaacacaaattgcttccct 991  T
Q  208 taagcaattgtatggataggtattttaagga 238  Q
    | || || |||||| ||| ||||||||||||    
T  990 tgagtaagtgtatgaatatgtattttaagga 960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0506 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0506
Description:

Target: scaffold0506; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 110 - 299
Target Start/End: Complemental strand, 3134 - 2943
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaat-aattctccaatgagaaaaacatgagttacatccctt 208  Q
    |||||||| || |||||||||||||||  || | |||||||||||||||||||||  |||||| ||  ||||||||||| |  ||  |||| | ||||||    
T  3134 atgaaagtaaaatcttgtgttttaagttctcataatatacccacatcttgttttaaagtgaataaaacctccaatgagatatgcacaagttgcttccctt 3035  T
Q  209 aagcaattgtatggataggtattttaagg-agcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
     || || |||||| ||||||||||||||| |   |||||||| | ||  ||||  |||||||| ||||||| ||| ||||||||||||||||    
T  3034 gagtaaatgtatgaataggtattttaaggaaatgcgttctaattttagtggtacgttaacctttaaaaattctcaaagtaaaaatagtataa 2943  T

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Target: scaffold0974 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0974
Description:

Target: scaffold0974; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 476 - 540
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataa 174  Q
    |||||||| |||||||||||||||||| ||| | |||||||||||||||||||||  ||||||||    
T  476 atgaaagtaaactcttgtgttttaagttttccttatatacccacatcttgttttaaagtgaataa 540  T

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Target: scaffold0157 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 299
Target Start/End: Complemental strand, 6393 - 6318
Alignment:
Q  224 taggtattttaaggagcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    |||||||||| ||||||||||||||||| |||  ||||||| ||| | |||| |||||||||||||| ||||||||    
T  6393 taggtattttgaggagcacgttctaactttaatagtaaattgaccattaaaagttttcagagtaaaagtagtataa 6318  T

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Target: scaffold0146 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 190
Target Start/End: Original strand, 22237 - 22319
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaa--taattctccaatgagaaaa 190  Q
    ||||||||||  ||||||||| |||||||||||| |||||||||| |  |||||||||||||   ||||||||||||||||||    
T  22237 atgaaagtgatttcttgtgttataagtattcttgctatacccacaacaagttttattgtgaaataaattctccaatgagaaaa 22319  T

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Target: scaffold0116 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 299
Target Start/End: Complemental strand, 38566 - 38388
Alignment:
Q  122 tcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaaaca-tgagttacatcccttaagcaattgtat 220  Q
    ||||||||| ||||| |||||| ||||||||||||  |||||||||| || |||| || |||||||||| ||   |||| ||  |||| || ||||||||    
T  38566 tcttgtgttgtaagtgttcttgctatacccacatcaagttttattgttaa-aattttctaatgagaaaagcacctagttgcaatccttgagtaattgtat 38468  T
Q  221 ggataggtattttaaggagcacgttctaactctaaaggtaaatt-aaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    |  || ||||||||| || |||||||||||| ||| ||||| ||  ||| | |||||| |||||||||||| ||||||||    
T  38467 gattatgtattttaatgaacacgttctaactttaatggtaacttggacccttaaaaatcttcagagtaaaagtagtataa 38388  T

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Target: scaffold0022 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 174
Target Start/End: Original strand, 24958 - 25013
Alignment:
Q  119 aactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataa 174  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||    
T  24958 aactcttgtgttttaagtcttcttgacatacccacatcttgttttaaagtgaataa 25013  T

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Target: scaffold0034 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 59472 - 59408
Alignment:
Q  110 atgaaagtgaactcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataa 174  Q
    |||||||| ||||||||||||||||||  || | |||||||||||||||||||||  ||||||||    
T  59472 atgaaagtaaactcttgtgttttaagttctccttatatacccacatcttgttttaaagtgaataa 59408  T

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Target: scaffold0417 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 96
Target Start/End: Complemental strand, 9567 - 9534
Alignment:
Q  63 taagttttgcaactgtagcagttttagcccccca 96  Q
    ||||||||||||||||||||||||||||||||||    
T  9567 taagttttgcaactgtagcagttttagcccccca 9534  T

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Target: scaffold0473 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 190
Target Start/End: Original strand, 13409 - 13476
Alignment:
Q  122 tcttgtgttttaagtattcttgatatacccacatcttgttttattgtgaataattctccaatgagaaaa 190  Q
    ||||||||| ||||| | |||| ||||||||||||  ||||||||||||| |||||| |||||||||||    
T  13409 tcttgtgttgtaagtgtccttgctatacccacatcaagttttattgtgaa-aattcttcaatgagaaaa 13476  T

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Target: scaffold0848 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 299
Target Start/End: Original strand, 1442 - 1517
Alignment:
Q  224 taggtattttaaggagcacgttctaactctaaaggtaaattaaccttcaaaaattttcagagtaaaaatagtataa 299  Q
    |||||||||||||||||| ||||||||| ||  ||||||||  || | |||| |||||| ||||||| ||||||||    
T  1442 taggtattttaaggagcatgttctaactttagtggtaaattggcccttaaaagttttcaaagtaaaagtagtataa 1517  T

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Target: scaffold0735 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0735
Description:

Target: scaffold0735; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 6078 - 6115
Alignment:
Q  1 gccccctaaccttcacgaagttgtgattttgaccccct 38  Q
    |||| ||||| |||||||||||||||||||||||||||    
T  6078 gccctctaactttcacgaagttgtgattttgaccccct 6115  T

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