View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8584_low_16 (Length: 258)
Name: NF8584_low_16
Description: NF8584
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8584_low_16 |
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Alignment Details
Target: chr1 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 13 - 242
Target Start/End: Original strand, 28954242 - 28954477
Alignment:
| Q |
13 |
gtttggtgttagtagttatgacatgcatttagttatgatctgaagtt------tcagtttcagcagagaaagttcccatcttttgtatatcagaatcaga |
106 |
Q |
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| T |
28954242 |
gtttggtgttagtagttatgacatgcatttagttatgatctgaagtttcagtttcagtttcagcagagaaagttcccatcttttgtatatcagaatcaga |
28954341 |
T |
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| Q |
107 |
tcagaaccaaaagagttagtatttttgaaaaagggaagtgtgatgtgtaagttcaaaaataaacaatgtgattaatttgtgtatttttgaaaaacaagga |
206 |
Q |
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| T |
28954342 |
tcagaaccaaaagagttagtatttttgaaaaagggaagtgtgatgtgtaagttcaaaaataaacaatgtgattaatttgtgtatttttgaaaaacaagga |
28954441 |
T |
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| Q |
207 |
tgagaatggaattttggtacaaagtgagtttgaagt |
242 |
Q |
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| T |
28954442 |
tgagaatggaactttggtacaaagtgagtttgaagt |
28954477 |
T |
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