View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8584_low_19 (Length: 231)

Name: NF8584_low_19
Description: NF8584
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8584_low_19
NF8584_low_19
[»] chr3 (44 HSPs)
chr3 (37-225)||(47056570-47056762)
chr3 (198-231)||(3069612-3069645)
chr3 (198-231)||(20714243-20714276)
chr3 (198-231)||(32931956-32931989)
chr3 (198-231)||(36818956-36818989)
chr3 (195-231)||(51464310-51464346)
chr3 (196-231)||(14957834-14957869)
chr3 (196-231)||(20380927-20380962)
chr3 (197-231)||(462439-462473)
chr3 (197-231)||(11327107-11327141)
chr3 (197-231)||(23163195-23163229)
chr3 (198-228)||(28263551-28263581)
chr3 (198-231)||(108431-108464)
chr3 (198-231)||(1901964-1901997)
chr3 (198-231)||(1911410-1911443)
chr3 (198-231)||(3958056-3958089)
chr3 (198-231)||(5398918-5398951)
chr3 (198-231)||(8254027-8254060)
chr3 (198-231)||(12792638-12792671)
chr3 (198-231)||(18169157-18169190)
chr3 (198-231)||(20215948-20215981)
chr3 (198-231)||(30400194-30400227)
chr3 (195-228)||(31176481-31176514)
chr3 (198-231)||(34021501-34021534)
chr3 (198-231)||(34607958-34607991)
chr3 (198-231)||(35272027-35272060)
chr3 (198-231)||(35376589-35376622)
chr3 (198-231)||(38944179-38944212)
chr3 (198-231)||(43169780-43169813)
chr3 (198-231)||(47683801-47683834)
chr3 (198-231)||(48405410-48405443)
chr3 (198-231)||(48945847-48945880)
chr3 (198-231)||(49196696-49196729)
chr3 (198-231)||(52454132-52454165)
chr3 (198-231)||(52564672-52564705)
chr3 (198-231)||(53932429-53932462)
chr3 (195-231)||(2482712-2482748)
chr3 (198-230)||(4140613-4140645)
chr3 (197-225)||(16295463-16295491)
chr3 (195-231)||(29573394-29573430)
chr3 (198-230)||(41877650-41877682)
chr3 (197-225)||(42643234-42643262)
chr3 (199-231)||(47101523-47101555)
chr3 (195-231)||(50294150-50294186)
[»] chr7 (27 HSPs)
chr7 (105-194)||(44196574-44196663)
chr7 (197-231)||(25200397-25200431)
chr7 (198-231)||(30864455-30864488)
chr7 (198-231)||(31274567-31274600)
chr7 (191-231)||(237017-237057)
chr7 (199-231)||(37325857-37325889)
chr7 (196-231)||(19880269-19880304)
chr7 (196-231)||(29162317-29162352)
chr7 (196-231)||(31982055-31982090)
chr7 (197-231)||(2347097-2347131)
chr7 (197-231)||(33050182-33050216)
chr7 (198-231)||(2469703-2469736)
chr7 (198-231)||(3040412-3040445)
chr7 (198-231)||(4971290-4971323)
chr7 (198-231)||(10656632-10656665)
chr7 (198-231)||(19426580-19426613)
chr7 (198-231)||(22330658-22330691)
chr7 (198-231)||(27164875-27164908)
chr7 (199-228)||(37173015-37173044)
chr7 (198-231)||(37352017-37352050)
chr7 (198-231)||(37856192-37856225)
chr7 (198-231)||(41966332-41966365)
chr7 (198-231)||(41985127-41985160)
chr7 (195-231)||(6353722-6353758)
chr7 (195-231)||(28109954-28109990)
chr7 (196-228)||(29763828-29763860)
chr7 (195-231)||(41080123-41080159)
[»] chr5 (31 HSPs)
chr5 (195-231)||(3263546-3263582)
chr5 (196-231)||(9599766-9599801)
chr5 (196-231)||(12718418-12718453)
chr5 (196-231)||(12779644-12779679)
chr5 (197-231)||(30574415-30574449)
chr5 (198-231)||(9594478-9594511)
chr5 (196-231)||(3109625-3109660)
chr5 (196-231)||(34381010-34381045)
chr5 (197-231)||(4719649-4719683)
chr5 (197-231)||(16143389-16143423)
chr5 (197-231)||(19127123-19127157)
chr5 (197-231)||(39595271-39595305)
chr5 (197-231)||(42699056-42699090)
chr5 (198-231)||(6865814-6865847)
chr5 (198-231)||(12512803-12512836)
chr5 (198-231)||(14914372-14914405)
chr5 (198-231)||(23991172-23991205)
chr5 (198-231)||(28501592-28501625)
chr5 (198-231)||(28811429-28811462)
chr5 (195-224)||(32873194-32873223)
chr5 (198-231)||(33823731-33823764)
chr5 (198-231)||(36713216-36713249)
chr5 (198-231)||(38500943-38500976)
chr5 (195-231)||(6420669-6420705)
chr5 (195-231)||(12661985-12662021)
chr5 (195-231)||(15918028-15918064)
chr5 (195-231)||(26754676-26754712)
chr5 (195-231)||(27440476-27440512)
chr5 (195-231)||(30334793-30334829)
chr5 (196-228)||(36581506-36581538)
chr5 (195-231)||(41621966-41622002)
[»] chr2 (27 HSPs)
chr2 (195-231)||(30487507-30487543)
chr2 (197-231)||(25801840-25801874)
chr2 (198-231)||(34144589-34144622)
chr2 (198-231)||(37966367-37966400)
chr2 (197-231)||(4344448-4344482)
chr2 (197-231)||(30856806-30856840)
chr2 (198-231)||(2308360-2308393)
chr2 (198-231)||(3196125-3196158)
chr2 (198-231)||(4738610-4738643)
chr2 (198-231)||(5167780-5167813)
chr2 (198-231)||(6365186-6365219)
chr2 (198-231)||(10687941-10687974)
chr2 (198-231)||(14140375-14140408)
chr2 (198-231)||(15283288-15283321)
chr2 (198-231)||(27307269-27307302)
chr2 (198-231)||(29795447-29795480)
chr2 (198-231)||(31296883-31296916)
chr2 (198-231)||(33296109-33296142)
chr2 (198-231)||(35171264-35171297)
chr2 (198-231)||(36132974-36133007)
chr2 (198-231)||(36435681-36435714)
chr2 (198-231)||(36909881-36909914)
chr2 (198-231)||(41040266-41040299)
chr2 (198-231)||(42283277-42283310)
chr2 (195-231)||(32688582-32688618)
chr2 (199-231)||(36582260-36582292)
chr2 (199-231)||(38246789-38246821)
[»] chr4 (39 HSPs)
chr4 (196-231)||(39241328-39241363)
chr4 (197-231)||(7037522-7037556)
chr4 (198-231)||(1796366-1796399)
chr4 (198-231)||(5208365-5208398)
chr4 (198-231)||(27001447-27001480)
chr4 (198-231)||(51377331-51377364)
chr4 (198-231)||(51717320-51717353)
chr4 (198-231)||(55268039-55268072)
chr4 (195-231)||(39010175-39010211)
chr4 (196-231)||(11997683-11997718)
chr4 (196-231)||(15596394-15596429)
chr4 (196-231)||(26885289-26885324)
chr4 (196-231)||(30778291-30778326)
chr4 (197-231)||(6370979-6371013)
chr4 (197-231)||(9032779-9032813)
chr4 (197-231)||(30042133-30042167)
chr4 (197-231)||(32365694-32365728)
chr4 (197-231)||(33438044-33438078)
chr4 (197-231)||(37547064-37547098)
chr4 (198-231)||(169540-169573)
chr4 (198-231)||(3222989-3223022)
chr4 (198-231)||(4896538-4896571)
chr4 (198-231)||(10994190-10994223)
chr4 (198-231)||(11064127-11064160)
chr4 (198-231)||(13267516-13267549)
chr4 (198-231)||(24235320-24235353)
chr4 (198-231)||(26440676-26440709)
chr4 (198-231)||(31221413-31221446)
chr4 (198-231)||(34116578-34116611)
chr4 (198-231)||(34259815-34259848)
chr4 (198-231)||(41119508-41119541)
chr4 (198-231)||(43168752-43168785)
chr4 (198-231)||(44368240-44368273)
chr4 (198-231)||(46173550-46173583)
chr4 (198-231)||(51359828-51359861)
chr4 (198-231)||(54036556-54036589)
chr4 (196-228)||(1031753-1031785)
chr4 (199-231)||(28676179-28676211)
chr4 (196-224)||(36812448-36812476)
[»] chr1 (28 HSPs)
chr1 (197-231)||(13813557-13813591)
chr1 (195-231)||(20288378-20288414)
chr1 (196-231)||(11597646-11597681)
chr1 (196-231)||(25995458-25995493)
chr1 (196-231)||(32821633-32821668)
chr1 (198-229)||(36439657-36439688)
chr1 (197-231)||(5309078-5309112)
chr1 (197-231)||(41507221-41507255)
chr1 (197-231)||(50528095-50528129)
chr1 (198-231)||(6829821-6829854)
chr1 (198-231)||(9011645-9011678)
chr1 (198-231)||(25302681-25302714)
chr1 (198-231)||(27687546-27687579)
chr1 (198-231)||(30439250-30439283)
chr1 (198-231)||(31427995-31428028)
chr1 (198-231)||(39669806-39669839)
chr1 (198-231)||(40596081-40596114)
chr1 (198-231)||(40612114-40612147)
chr1 (198-231)||(42256460-42256493)
chr1 (198-231)||(45740582-45740615)
chr1 (198-231)||(48325805-48325838)
chr1 (198-231)||(49425738-49425771)
chr1 (198-231)||(49453491-49453524)
chr1 (198-231)||(50226917-50226950)
chr1 (196-224)||(30505381-30505409)
chr1 (195-231)||(32938856-32938892)
chr1 (199-231)||(32966268-32966300)
chr1 (199-231)||(36231744-36231776)
[»] scaffold0011 (2 HSPs)
scaffold0011 (195-228)||(18592-18625)
scaffold0011 (198-231)||(219702-219735)
[»] chr8 (21 HSPs)
chr8 (198-231)||(1065417-1065450)
chr8 (198-231)||(20288533-20288566)
chr8 (198-231)||(21075162-21075195)
chr8 (198-231)||(30927969-30928002)
chr8 (195-231)||(1796493-1796529)
chr8 (200-231)||(21648969-21649000)
chr8 (197-231)||(21273748-21273782)
chr8 (197-231)||(38844828-38844862)
chr8 (197-231)||(43873729-43873763)
chr8 (198-231)||(5502371-5502404)
chr8 (198-231)||(12732842-12732875)
chr8 (198-231)||(22852877-22852910)
chr8 (198-231)||(28927681-28927714)
chr8 (198-231)||(41273515-41273548)
chr8 (198-231)||(41293759-41293792)
chr8 (198-231)||(43419879-43419912)
chr8 (198-231)||(44380652-44380685)
chr8 (198-231)||(45101396-45101429)
chr8 (198-226)||(3650113-3650141)
chr8 (199-231)||(39719286-39719318)
chr8 (196-224)||(45081396-45081424)
[»] chr6 (13 HSPs)
chr6 (198-231)||(2056783-2056816)
chr6 (198-231)||(9954548-9954581)
chr6 (197-231)||(2163701-2163735)
chr6 (197-231)||(2175334-2175368)
chr6 (197-231)||(3660391-3660425)
chr6 (197-231)||(32457290-32457324)
chr6 (198-231)||(3339537-3339570)
chr6 (198-231)||(11785355-11785388)
chr6 (198-231)||(30796113-30796146)
chr6 (199-231)||(6435037-6435069)
chr6 (195-227)||(25554242-25554274)
chr6 (195-227)||(25995439-25995471)
chr6 (195-227)||(26094902-26094934)
[»] scaffold0286 (1 HSPs)
scaffold0286 (197-231)||(18674-18708)
[»] scaffold0026 (1 HSPs)
scaffold0026 (197-231)||(113624-113658)
[»] scaffold0003 (1 HSPs)
scaffold0003 (198-228)||(88808-88838)
[»] scaffold0514 (1 HSPs)
scaffold0514 (198-231)||(1534-1567)
[»] scaffold0131 (1 HSPs)
scaffold0131 (199-231)||(15572-15604)


Alignment Details
Target: chr3 (Bit Score: 160; Significance: 2e-85; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 37 - 225
Target Start/End: Complemental strand, 47056762 - 47056570
Alignment:
Q  37 gtgcaagaaaagcaagaatgactatatatattt----ggctttagataaactggaaaatattagttccgtgaaagatggaaatcatggccgttccttggt 132  Q
    |||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47056762 gtgcaagaaaagcaagaatgactatatatatttatttggctttagataaactggaaaatattagttccgtgaaagatggaaatcatggccgttccttggt 47056663  T
Q  133 taaattctagggacctgatctgttcgtgcatttcttgcttgaactttctcgtaacattaagcattgagaaatgatatttgtacaaccaatttg 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||| ||||    
T  47056662 taaattctagggacctgatctgttcgtgcatttcttgcttgaactttcccgtaacattaaacattgagaaatgatatttgtgcaaccattttg 47056570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 3069645 - 3069612
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||||||||||||||    
T  3069645 gagaaatgatatttgtacaaccaatttgtgacaa 3069612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 20714243 - 20714276
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||||||||||||||    
T  20714243 gagaaatgatatttgtacaaccaatttgtgacaa 20714276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 32931989 - 32931956
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||||||||||||||    
T  32931989 gagaaatgatatttgtacaaccaatttgtgacaa 32931956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 36818956 - 36818989
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||||||||||||||    
T  36818956 gagaaatgatatttgtacaaccaatttgtgacaa 36818989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 231
Target Start/End: Complemental strand, 51464346 - 51464310
Alignment:
Q  195 attgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||||||| ||||||||||    
T  51464346 attgagaaatgatatttgtacaaccactttgtgacaa 51464310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 231
Target Start/End: Original strand, 14957834 - 14957869
Alignment:
Q  196 ttgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||||| ||||||||||    
T  14957834 ttgagaaatgatatttgtacaaccactttgtgacaa 14957869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 231
Target Start/End: Complemental strand, 20380962 - 20380927
Alignment:
Q  196 ttgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||||| ||||||||||    
T  20380962 ttgagaaatgatatttgtacaaccactttgtgacaa 20380927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Complemental strand, 462473 - 462439
Alignment:
Q  197 tgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||||| ||||||||||    
T  462473 tgagaaatgatatttgtacaaccattttgtgacaa 462439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Original strand, 11327107 - 11327141
Alignment:
Q  197 tgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||||| ||||||||||    
T  11327107 tgagaaatgatatttgtacaaccattttgtgacaa 11327141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Complemental strand, 23163229 - 23163195
Alignment:
Q  197 tgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||| ||||||||||||||||||||||||||    
T  23163229 tgagaaatcatatttgtacaaccaatttgtgacaa 23163195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 228
Target Start/End: Original strand, 28263551 - 28263581
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtga 228  Q
    |||||||||||||||||||||||||||||||    
T  28263551 gagaaatgatatttgtacaaccaatttgtga 28263581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 108431 - 108464
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  108431 gagaaatgatatttgtacaaccactttgtgacaa 108464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 1901997 - 1901964
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  1901997 gagaaatgatatttgtacaaccactttgtgacaa 1901964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 1911443 - 1911410
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  1911443 gagaaatgatatttgtacaaccactttgtgacaa 1911410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 3958089 - 3958056
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||| |||||||||||||    
T  3958089 gagaaatgatatttgtacaatcaatttgtgacaa 3958056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 5398918 - 5398951
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  5398918 gagaaatgatatttgtacaaccactttgtgacaa 5398951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 8254027 - 8254060
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  8254027 gagaaatgatatttgtacaaccattttgtgacaa 8254060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 12792638 - 12792671
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  12792638 gagaaatgatatttgtacaaccactttgtgacaa 12792671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 18169157 - 18169190
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  18169157 gagaaatgatatttgtacaaccactttgtgacaa 18169190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 20215948 - 20215981
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  20215948 gagaaatgatatttgtacaaccactttgtgacaa 20215981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 30400227 - 30400194
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||| ||||||||||||    
T  30400227 gagaaatgatatttgtacaacaaatttgtgacaa 30400194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 228
Target Start/End: Complemental strand, 31176514 - 31176481
Alignment:
Q  195 attgagaaatgatatttgtacaaccaatttgtga 228  Q
    |||||||||||||||||||||||||| |||||||    
T  31176514 attgagaaatgatatttgtacaaccactttgtga 31176481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 34021534 - 34021501
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||| |||||||||||||    
T  34021534 gagaaatgatatttgtacaatcaatttgtgacaa 34021501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 34607991 - 34607958
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  34607991 gagaaatgatatttgtacaaccactttgtgacaa 34607958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 35272027 - 35272060
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  35272027 gagaaatgatatttgtacaaccactttgtgacaa 35272060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 35376622 - 35376589
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  35376622 gagaaatgatatttgtacaaccattttgtgacaa 35376589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 38944212 - 38944179
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||| ||||||||||||    
T  38944212 gagaaatgatatttgtacaactaatttgtgacaa 38944179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 43169813 - 43169780
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  43169813 gagaaatgatatttgtacaaccattttgtgacaa 43169780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 47683801 - 47683834
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  47683801 gagaaatgatatttgtacaaccattttgtgacaa 47683834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 48405410 - 48405443
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  48405410 gagaaatgatatttgtacaaccattttgtgacaa 48405443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 48945847 - 48945880
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  48945847 gagaaatgatatttgtacaaccactttgtgacaa 48945880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 49196696 - 49196729
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  49196696 gagaaatgatatttgtacaaccattttgtgacaa 49196729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 52454165 - 52454132
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||| |||||||||||||    
T  52454165 gagaaatgatatttgtacaatcaatttgtgacaa 52454132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 52564705 - 52564672
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  52564705 gagaaatgatatttgtacaaccattttgtgacaa 52564672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 53932462 - 53932429
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  53932462 gagaaatgatatttgtacaaccattttgtgacaa 53932429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 231
Target Start/End: Complemental strand, 2482748 - 2482712
Alignment:
Q  195 attgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  2482748 attgagaaatgatatttgtacatccattttgtgacaa 2482712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 230
Target Start/End: Complemental strand, 4140645 - 4140613
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgaca 230  Q
    ||||||||||||||| |||||||||||||||||    
T  4140645 gagaaatgatatttgaacaaccaatttgtgaca 4140613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 16295463 - 16295491
Alignment:
Q  197 tgagaaatgatatttgtacaaccaatttg 225  Q
    |||||||||||||||||||||||||||||    
T  16295463 tgagaaatgatatttgtacaaccaatttg 16295491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 231
Target Start/End: Complemental strand, 29573430 - 29573394
Alignment:
Q  195 attgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||||||| ||||| ||||    
T  29573430 attgagaaatgatatttgtacaaccattttgtaacaa 29573394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 230
Target Start/End: Complemental strand, 41877682 - 41877650
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgaca 230  Q
    ||||||||||||||||||||||| |||||||||    
T  41877682 gagaaatgatatttgtacaaccactttgtgaca 41877650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 42643234 - 42643262
Alignment:
Q  197 tgagaaatgatatttgtacaaccaatttg 225  Q
    |||||||||||||||||||||||||||||    
T  42643234 tgagaaatgatatttgtacaaccaatttg 42643262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 231
Target Start/End: Original strand, 47101523 - 47101555
Alignment:
Q  199 agaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||| ||||||||||    
T  47101523 agaaatgatatttgtacaaccattttgtgacaa 47101555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 231
Target Start/End: Complemental strand, 50294186 - 50294150
Alignment:
Q  195 attgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||||||| |||| |||||    
T  50294186 attgagaaatgatatttgtacaaccactttgcgacaa 50294150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 105 - 194
Target Start/End: Original strand, 44196574 - 44196663
Alignment:
Q  105 aagatggaaatcatggccgttccttggttaaattctagggacctgatctgttcgtgcatttcttgcttgaactttctcgtaacattaagc 194  Q
    |||| ||||||||||| ||||||||||||||||| || | ||||||||| ||||||||||||||||||||||||||  ||||||||||||    
T  44196574 aagacggaaatcatggtcgttccttggttaaattataagaacctgatctattcgtgcatttcttgcttgaactttcctgtaacattaagc 44196663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 197 - 231
Target Start/End: Complemental strand, 25200431 - 25200397
Alignment:
Q  197 tgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||||||||||||||||    
T  25200431 tgagaaatgatatttgtacaaccaatttgtgacaa 25200397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 30864488 - 30864455
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||||||||||||||    
T  30864488 gagaaatgatatttgtacaaccaatttgtgacaa 30864455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 31274600 - 31274567
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||||||||||||||    
T  31274600 gagaaatgatatttgtacaaccaatttgtgacaa 31274567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 231
Target Start/End: Original strand, 237017 - 237057
Alignment:
Q  191 aagcattgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||| |||||||||||||||||| |||||||||||||    
T  237017 aagcattgggaaatgatatttgtacaatcaatttgtgacaa 237057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 231
Target Start/End: Complemental strand, 37325889 - 37325857
Alignment:
Q  199 agaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||||||||||||||    
T  37325889 agaaatgatatttgtacaaccaatttgtgacaa 37325857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 231
Target Start/End: Complemental strand, 19880304 - 19880269
Alignment:
Q  196 ttgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||| |||||||||||||||||||||||    
T  19880304 ttgagaaatgatgtttgtacaaccaatttgtgacaa 19880269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 231
Target Start/End: Complemental strand, 29162352 - 29162317
Alignment:
Q  196 ttgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||| |||||||||||||    
T  29162352 ttgagaaatgatatttgtacaatcaatttgtgacaa 29162317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 231
Target Start/End: Original strand, 31982055 - 31982090
Alignment:
Q  196 ttgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||||| ||||||||||    
T  31982055 ttgagaaatgatatttgtacaaccactttgtgacaa 31982090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Complemental strand, 2347131 - 2347097
Alignment:
Q  197 tgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||||| ||||||||||    
T  2347131 tgagaaatgatatttgtacaaccattttgtgacaa 2347097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Original strand, 33050182 - 33050216
Alignment:
Q  197 tgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||||| ||||||||||    
T  33050182 tgagaaatgatatttgtacaaccattttgtgacaa 33050216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 2469703 - 2469736
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  2469703 gagaaatgatatttgtacaaccactttgtgacaa 2469736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 3040412 - 3040445
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||| ||||||||||||||||||||||||||    
T  3040412 gagaaattatatttgtacaaccaatttgtgacaa 3040445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 4971290 - 4971323
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  4971290 gagaaatgatatttgtacaaccattttgtgacaa 4971323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 10656632 - 10656665
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||||||| ||||||    
T  10656632 gagaaatgatatttgtacaaccaatttctgacaa 10656665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 19426580 - 19426613
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  19426580 gagaaatgatatttgtacaaccattttgtgacaa 19426613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 22330691 - 22330658
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  22330691 gagaaatgatatttgtacaaccactttgtgacaa 22330658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 27164908 - 27164875
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||| |||||||||||||    
T  27164908 gagaaatgatatttgtacaatcaatttgtgacaa 27164875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Complemental strand, 37173044 - 37173015
Alignment:
Q  199 agaaatgatatttgtacaaccaatttgtga 228  Q
    ||||||||||||||||||||||||||||||    
T  37173044 agaaatgatatttgtacaaccaatttgtga 37173015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 37352050 - 37352017
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  37352050 gagaaatgatatttgtacaaccactttgtgacaa 37352017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 37856225 - 37856192
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  37856225 gagaaatgatatttgtacaaccattttgtgacaa 37856192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 41966332 - 41966365
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  41966332 gagaaatgatatttgtacaaccactttgtgacaa 41966365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 41985160 - 41985127
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||| |||||||||||||    
T  41985160 gagaaatgatatttgtacaatcaatttgtgacaa 41985127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 6353722 - 6353758
Alignment:
Q  195 attgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  6353722 attgagaaatgatatttgtacaaccattttttgacaa 6353758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 28109954 - 28109990
Alignment:
Q  195 attgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  28109954 attgagaaatgatatttgtacaaccactttttgacaa 28109990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 228
Target Start/End: Original strand, 29763828 - 29763860
Alignment:
Q  196 ttgagaaatgatatttgtacaaccaatttgtga 228  Q
    ||||||||||||||||||||||||| |||||||    
T  29763828 ttgagaaatgatatttgtacaaccattttgtga 29763860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 41080123 - 41080159
Alignment:
Q  195 attgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| || ||||||||||    
T  41080123 attgagaaatgatatttgtacaatcattttgtgacaa 41080159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000005; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 231
Target Start/End: Complemental strand, 3263582 - 3263546
Alignment:
Q  195 attgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||||||||||||||||||    
T  3263582 attgagaaatgatatttgtacaaccaatttgtgacaa 3263546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 231
Target Start/End: Complemental strand, 9599801 - 9599766
Alignment:
Q  196 ttgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||||||||||||||||    
T  9599801 ttgagaaatgatatttgtacaaccaatttgtgacaa 9599766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 231
Target Start/End: Complemental strand, 12718453 - 12718418
Alignment:
Q  196 ttgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||||||||||||||||    
T  12718453 ttgagaaatgatatttgtacaaccaatttgtgacaa 12718418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 231
Target Start/End: Complemental strand, 12779679 - 12779644
Alignment:
Q  196 ttgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||||||||||||||||    
T  12779679 ttgagaaatgatatttgtacaaccaatttgtgacaa 12779644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 197 - 231
Target Start/End: Complemental strand, 30574449 - 30574415
Alignment:
Q  197 tgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||||||||||||||||    
T  30574449 tgagaaatgatatttgtacaaccaatttgtgacaa 30574415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 9594478 - 9594511
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||||||||||||||    
T  9594478 gagaaatgatatttgtacaaccaatttgtgacaa 9594511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 231
Target Start/End: Complemental strand, 3109660 - 3109625
Alignment:
Q  196 ttgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||| |||||||||||||    
T  3109660 ttgagaaatgatatttgtacaatcaatttgtgacaa 3109625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 231
Target Start/End: Original strand, 34381010 - 34381045
Alignment:
Q  196 ttgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||||| ||||||||||    
T  34381010 ttgagaaatgatatttgtacaaccactttgtgacaa 34381045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Original strand, 4719649 - 4719683
Alignment:
Q  197 tgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||||||||| ||||||    
T  4719649 tgagaaatgatatttgtacaaccaatttttgacaa 4719683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Original strand, 16143389 - 16143423
Alignment:
Q  197 tgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||||| ||||||||||    
T  16143389 tgagaaatgatatttgtacaaccattttgtgacaa 16143423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Original strand, 19127123 - 19127157
Alignment:
Q  197 tgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||||| ||||||||||    
T  19127123 tgagaaatgatatttgtacaaccactttgtgacaa 19127157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Original strand, 39595271 - 39595305
Alignment:
Q  197 tgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||||| ||||||||||    
T  39595271 tgagaaatgatatttgtacaaccactttgtgacaa 39595305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Original strand, 42699056 - 42699090
Alignment:
Q  197 tgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||||| ||||||||||    
T  42699056 tgagaaatgatatttgtacaaccattttgtgacaa 42699090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 6865847 - 6865814
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  6865847 gagaaatgatatttgtacaaccactttgtgacaa 6865814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 12512803 - 12512836
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||| |||||||||||||||||    
T  12512803 gagaaatgatatttgtgcaaccaatttgtgacaa 12512836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 14914372 - 14914405
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  14914372 gagaaatgatatttgtacaaccattttgtgacaa 14914405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 23991205 - 23991172
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  23991205 gagaaatgatatttgtacaaccactttgtgacaa 23991172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 28501592 - 28501625
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  28501592 gagaaatgatatttgtacaaccattttgtgacaa 28501625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 28811429 - 28811462
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  28811429 gagaaatgatatttgtacaaccactttgtgacaa 28811462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 224
Target Start/End: Complemental strand, 32873223 - 32873194
Alignment:
Q  195 attgagaaatgatatttgtacaaccaattt 224  Q
    ||||||||||||||||||||||||||||||    
T  32873223 attgagaaatgatatttgtacaaccaattt 32873194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 33823764 - 33823731
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||||| |||||||||    
T  33823764 gagaaatgatatttgtacaaccaacttgtgacaa 33823731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 36713249 - 36713216
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  36713249 gagaaatgatatttgtacaaccactttgtgacaa 36713216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 38500943 - 38500976
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  38500943 gagaaatgatatttgtacaaccattttgtgacaa 38500976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 6420669 - 6420705
Alignment:
Q  195 attgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  6420669 attgagaaatgatatttctacaaccattttgtgacaa 6420705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 231
Target Start/End: Complemental strand, 12662021 - 12661985
Alignment:
Q  195 attgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  12662021 attgagaaatgatatttgtacatccactttgtgacaa 12661985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 231
Target Start/End: Complemental strand, 15918064 - 15918028
Alignment:
Q  195 attgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||||  ||||||||||||    
T  15918064 attgagaaatgatatttgtacaattaatttgtgacaa 15918028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 231
Target Start/End: Complemental strand, 26754712 - 26754676
Alignment:
Q  195 attgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||||||| || ||||||    
T  26754712 attgagaaatgatatttgtacaaccaaattttgacaa 26754676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 27440476 - 27440512
Alignment:
Q  195 attgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| || ||||||||||    
T  27440476 attgagaaatgatatttgtacaatcattttgtgacaa 27440512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 231
Target Start/End: Complemental strand, 30334829 - 30334793
Alignment:
Q  195 attgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  30334829 attgagaaatgatatttgtacaaccactttatgacaa 30334793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 228
Target Start/End: Complemental strand, 36581538 - 36581506
Alignment:
Q  196 ttgagaaatgatatttgtacaaccaatttgtga 228  Q
    ||||||||||||||||||||||||| |||||||    
T  36581538 ttgagaaatgatatttgtacaaccactttgtga 36581506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 231
Target Start/End: Complemental strand, 41622002 - 41621966
Alignment:
Q  195 attgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  41622002 attgagaaatgatatttgtacaaccactttttgacaa 41621966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000005; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 231
Target Start/End: Complemental strand, 30487543 - 30487507
Alignment:
Q  195 attgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||||||||||||||||||    
T  30487543 attgagaaatgatatttgtacaaccaatttgtgacaa 30487507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 197 - 231
Target Start/End: Complemental strand, 25801874 - 25801840
Alignment:
Q  197 tgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||||||||||||||||    
T  25801874 tgagaaatgatatttgtacaaccaatttgtgacaa 25801840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 34144622 - 34144589
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||||||||||||||    
T  34144622 gagaaatgatatttgtacaaccaatttgtgacaa 34144589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 37966367 - 37966400
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||||||||||||||    
T  37966367 gagaaatgatatttgtacaaccaatttgtgacaa 37966400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Original strand, 4344448 - 4344482
Alignment:
Q  197 tgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||||| ||||||||||    
T  4344448 tgagaaatgatatttgtacaaccattttgtgacaa 4344482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Original strand, 30856806 - 30856840
Alignment:
Q  197 tgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||||| ||||||||||    
T  30856806 tgagaaatgatatttgtacaaccactttgtgacaa 30856840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 2308393 - 2308360
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||||||| ||||||    
T  2308393 gagaaatgatatttgtacaaccaatttttgacaa 2308360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 3196158 - 3196125
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||| |||||||||||||    
T  3196158 gagaaatgatatttgtacaatcaatttgtgacaa 3196125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 4738643 - 4738610
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  4738643 gagaaatgatatttgtacaaccactttgtgacaa 4738610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 5167813 - 5167780
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  5167813 gagaaatgatatttgtacaaccactttgtgacaa 5167780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 6365186 - 6365219
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  6365186 gagaaatgatatttgtacaaccactttgtgacaa 6365219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 10687941 - 10687974
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||| |||||||||||||    
T  10687941 gagaaatgatatttgtacaaacaatttgtgacaa 10687974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 14140408 - 14140375
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||| ||||||||||||    
T  14140408 gagaaatgatatttgtacaactaatttgtgacaa 14140375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 15283321 - 15283288
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  15283321 gagaaatgatatttgtacaaccactttgtgacaa 15283288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 27307302 - 27307269
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||| |||||||||||||    
T  27307302 gagaaatgatatttgtacaatcaatttgtgacaa 27307269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 29795447 - 29795480
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  29795447 gagaaatgatatttgtacaaccattttgtgacaa 29795480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 31296916 - 31296883
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  31296916 gagaaatgatatttgtacaaccattttgtgacaa 31296883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 33296142 - 33296109
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  33296142 gagaaatgatatttgtacaaccactttgtgacaa 33296109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 35171297 - 35171264
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  35171297 gagaaatgatatttgtacaaccattttgtgacaa 35171264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 36132974 - 36133007
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  36132974 gagaaatgatatttgtacaaccactttgtgacaa 36133007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 36435681 - 36435714
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  36435681 gagaaatgatatttgtacaaccactttgtgacaa 36435714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 36909914 - 36909881
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  36909914 gagaaatgatatttgtacaaccattttgtgacaa 36909881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 41040266 - 41040299
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  41040266 gagaaatgatatttgtacaaccactttgtgacaa 41040299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 42283310 - 42283277
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  42283310 gagaaatgatatttgtacaaccactttgtgacaa 42283277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 231
Target Start/End: Complemental strand, 32688618 - 32688582
Alignment:
Q  195 attgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  32688618 attgagaaatgatatttgtacaaccactttctgacaa 32688582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 231
Target Start/End: Original strand, 36582260 - 36582292
Alignment:
Q  199 agaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||| |||||||||||    
T  36582260 agaaatgatatttgtacaacccatttgtgacaa 36582292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 231
Target Start/End: Complemental strand, 38246821 - 38246789
Alignment:
Q  199 agaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||| |||||||||||||    
T  38246821 agaaatgatatttgtacaatcaatttgtgacaa 38246789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000002; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 231
Target Start/End: Complemental strand, 39241363 - 39241328
Alignment:
Q  196 ttgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||||||||||||||||    
T  39241363 ttgagaaatgatatttgtacaaccaatttgtgacaa 39241328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 197 - 231
Target Start/End: Complemental strand, 7037556 - 7037522
Alignment:
Q  197 tgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||||||||||||||||    
T  7037556 tgagaaatgatatttgtacaaccaatttgtgacaa 7037522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 1796366 - 1796399
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||||||||||||||    
T  1796366 gagaaatgatatttgtacaaccaatttgtgacaa 1796399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 5208398 - 5208365
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||||||||||||||    
T  5208398 gagaaatgatatttgtacaaccaatttgtgacaa 5208365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 27001480 - 27001447
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||||||||||||||    
T  27001480 gagaaatgatatttgtacaaccaatttgtgacaa 27001447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 51377364 - 51377331
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||||||||||||||    
T  51377364 gagaaatgatatttgtacaaccaatttgtgacaa 51377331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 51717353 - 51717320
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||||||||||||||    
T  51717353 gagaaatgatatttgtacaaccaatttgtgacaa 51717320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 55268072 - 55268039
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||||||||||||||    
T  55268072 gagaaatgatatttgtacaaccaatttgtgacaa 55268039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 231
Target Start/End: Complemental strand, 39010211 - 39010175
Alignment:
Q  195 attgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||||||| ||||||||||    
T  39010211 attgagaaatgatatttgtacaaccattttgtgacaa 39010175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 231
Target Start/End: Original strand, 11997683 - 11997718
Alignment:
Q  196 ttgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||||| ||||||||||    
T  11997683 ttgagaaatgatatttgtacaaccactttgtgacaa 11997718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 231
Target Start/End: Original strand, 15596394 - 15596429
Alignment:
Q  196 ttgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||||| ||||||||||    
T  15596394 ttgagaaatgatatttgtacaaccactttgtgacaa 15596429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 231
Target Start/End: Original strand, 26885289 - 26885324
Alignment:
Q  196 ttgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||||| ||||||||||    
T  26885289 ttgagaaatgatatttgtacaaccactttgtgacaa 26885324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 231
Target Start/End: Complemental strand, 30778326 - 30778291
Alignment:
Q  196 ttgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||| ||||||||||||||    
T  30778326 ttgagaaatgatatttgtacagccaatttgtgacaa 30778291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Original strand, 6370979 - 6371013
Alignment:
Q  197 tgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||||| ||||||||||    
T  6370979 tgagaaatgatatttgtacaaccactttgtgacaa 6371013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Original strand, 9032779 - 9032813
Alignment:
Q  197 tgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||| |||||||||||||    
T  9032779 tgagaaatgatatttgtacaatcaatttgtgacaa 9032813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Original strand, 30042133 - 30042167
Alignment:
Q  197 tgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||||| ||||||||||    
T  30042133 tgagaaatgatatttgtacaaccattttgtgacaa 30042167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Complemental strand, 32365728 - 32365694
Alignment:
Q  197 tgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||||| ||||||||||    
T  32365728 tgagaaatgatatttgtacaaccattttgtgacaa 32365694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Original strand, 33438044 - 33438078
Alignment:
Q  197 tgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||| ||||||||||||||||    
T  33438044 tgagaaatgatatttgtaaaaccaatttgtgacaa 33438078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Original strand, 37547064 - 37547098
Alignment:
Q  197 tgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||||| ||||||||||    
T  37547064 tgagaaatgatatttgtacaaccactttgtgacaa 37547098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 169573 - 169540
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  169573 gagaaatgatatttgtacaaccattttgtgacaa 169540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 3222989 - 3223022
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||| |||||||||||||    
T  3222989 gagaaatgatatttgtacaatcaatttgtgacaa 3223022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 4896571 - 4896538
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  4896571 gagaaatgatatttgtacaaccactttgtgacaa 4896538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 10994223 - 10994190
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  10994223 gagaaatgatatttgtacaaccattttgtgacaa 10994190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 11064160 - 11064127
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  11064160 gagaaatgatatttgtacaaccactttgtgacaa 11064127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 13267549 - 13267516
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  13267549 gagaaatgatatttgtacaaccattttgtgacaa 13267516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 24235320 - 24235353
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||| |||||||||||||    
T  24235320 gagaaatgatatttgtacaatcaatttgtgacaa 24235353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 26440676 - 26440709
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  26440676 gagaaatgatatttgtacaaccactttgtgacaa 26440709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 31221413 - 31221446
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||| |||||||||||||    
T  31221413 gagaaatgatatttgtacaatcaatttgtgacaa 31221446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 34116611 - 34116578
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  34116611 gagaaatgatatttgtacaaccactttgtgacaa 34116578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 34259815 - 34259848
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  34259815 gagaaatgatatttgtacaaccattttgtgacaa 34259848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 41119541 - 41119508
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  41119541 gagaaatgatatttgtacaaccactttgtgacaa 41119508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 43168785 - 43168752
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  43168785 gagaaatgatatttgtacaaccattttgtgacaa 43168752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 44368273 - 44368240
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||| |||||||||||||    
T  44368273 gagaaatgatatttgtacaatcaatttgtgacaa 44368240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 46173550 - 46173583
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  46173550 gagaaatgatatttgtacaaccactttgtgacaa 46173583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 51359861 - 51359828
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  51359861 gagaaatgatatttgtacaaccattttgtgacaa 51359828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 54036589 - 54036556
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  54036589 gagaaatgatatttgtacaaccattttgtgacaa 54036556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 228
Target Start/End: Original strand, 1031753 - 1031785
Alignment:
Q  196 ttgagaaatgatatttgtacaaccaatttgtga 228  Q
    ||||||||||||||||||||||||| |||||||    
T  1031753 ttgagaaatgatatttgtacaaccactttgtga 1031785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 231
Target Start/End: Complemental strand, 28676211 - 28676179
Alignment:
Q  199 agaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||| ||||||||||    
T  28676211 agaaatgatatttgtacaaccattttgtgacaa 28676179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 224
Target Start/End: Complemental strand, 36812476 - 36812448
Alignment:
Q  196 ttgagaaatgatatttgtacaaccaattt 224  Q
    |||||||||||||||||||||||||||||    
T  36812476 ttgagaaatgatatttgtacaaccaattt 36812448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.00000000008; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 197 - 231
Target Start/End: Original strand, 13813557 - 13813591
Alignment:
Q  197 tgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||||||||||||||||    
T  13813557 tgagaaatgatatttgtacaaccaatttgtgacaa 13813591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 231
Target Start/End: Complemental strand, 20288414 - 20288378
Alignment:
Q  195 attgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||| ||||||||||||||    
T  20288414 attgagaaatgatatttgtacatccaatttgtgacaa 20288378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 231
Target Start/End: Original strand, 11597646 - 11597681
Alignment:
Q  196 ttgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||| |||||||||||||||||||||    
T  11597646 ttgagaaatgatatctgtacaaccaatttgtgacaa 11597681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 231
Target Start/End: Original strand, 25995458 - 25995493
Alignment:
Q  196 ttgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||| |||||||||||||    
T  25995458 ttgagaaatgatatttgtacaatcaatttgtgacaa 25995493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 231
Target Start/End: Original strand, 32821633 - 32821668
Alignment:
Q  196 ttgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||||| ||||||||||    
T  32821633 ttgagaaatgatatttgtacaaccactttgtgacaa 32821668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 198 - 229
Target Start/End: Original strand, 36439657 - 36439688
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgac 229  Q
    ||||||||||||||||||||||||||||||||    
T  36439657 gagaaatgatatttgtacaaccaatttgtgac 36439688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Complemental strand, 5309112 - 5309078
Alignment:
Q  197 tgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||||| ||||||||||    
T  5309112 tgagaaatgatatttgtacaaccactttgtgacaa 5309078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Complemental strand, 41507255 - 41507221
Alignment:
Q  197 tgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||||| ||||||||||    
T  41507255 tgagaaatgatatttgtacaaccattttgtgacaa 41507221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Complemental strand, 50528129 - 50528095
Alignment:
Q  197 tgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||| |||||||||||||    
T  50528129 tgagaaatgatatttgtacaatcaatttgtgacaa 50528095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 6829854 - 6829821
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||| ||||||||||||    
T  6829854 gagaaatgatatttgtacaactaatttgtgacaa 6829821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 9011645 - 9011678
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  9011645 gagaaatgatatttgtacaaccattttgtgacaa 9011678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 25302714 - 25302681
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  25302714 gagaaatgatatttgtacaaccactttgtgacaa 25302681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 27687579 - 27687546
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  27687579 gagaaatgatatttgtacaaccattttgtgacaa 27687546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 30439250 - 30439283
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||||||| ||||||    
T  30439250 gagaaatgatatttgtacaaccaatttatgacaa 30439283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 31428028 - 31427995
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  31428028 gagaaatgatatttgtacaaccactttgtgacaa 31427995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 39669806 - 39669839
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  39669806 gagaaatgatatttgtacaaccattttgtgacaa 39669839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 40596114 - 40596081
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  40596114 gagaaatgatatttgtacaaccattttgtgacaa 40596081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 40612114 - 40612147
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  40612114 gagaaatgatatttgtacaaccattttgtgacaa 40612147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 42256460 - 42256493
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  42256460 gagaaatgatatttgtacaaccattttgtgacaa 42256493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 45740615 - 45740582
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  45740615 gagaaatgatatttgtacaaccactttgtgacaa 45740582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 48325838 - 48325805
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  48325838 gagaaatgatatttgtacaaccattttgtgacaa 48325805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 49425738 - 49425771
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  49425738 gagaaatgatatttgtacaaccactttgtgacaa 49425771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 49453491 - 49453524
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  49453491 gagaaatgatatttgtacaaccactttgtgacaa 49453524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 50226950 - 50226917
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  50226950 gagaaatgatatttgtacaaccactttgtgacaa 50226917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 224
Target Start/End: Complemental strand, 30505409 - 30505381
Alignment:
Q  196 ttgagaaatgatatttgtacaaccaattt 224  Q
    |||||||||||||||||||||||||||||    
T  30505409 ttgagaaatgatatttgtacaaccaattt 30505381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 32938856 - 32938892
Alignment:
Q  195 attgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||||  ||||||||||||    
T  32938856 attgagaaatgatatttgtacaattaatttgtgacaa 32938892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 231
Target Start/End: Original strand, 32966268 - 32966300
Alignment:
Q  199 agaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||| ||||||||||    
T  32966268 agaaatgatatttgtacaaccactttgtgacaa 32966300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 231
Target Start/End: Complemental strand, 36231776 - 36231744
Alignment:
Q  199 agaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||| ||||||||||    
T  36231776 agaaatgatatttgtacaaccattttgtgacaa 36231744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 228
Target Start/End: Original strand, 18592 - 18625
Alignment:
Q  195 attgagaaatgatatttgtacaaccaatttgtga 228  Q
    ||||||||||||||||||||||||||||||||||    
T  18592 attgagaaatgatatttgtacaaccaatttgtga 18625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 219735 - 219702
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  219735 gagaaatgatatttgtacaaccactttgtgacaa 219702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000003; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 1065417 - 1065450
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||||||||||||||    
T  1065417 gagaaatgatatttgtacaaccaatttgtgacaa 1065450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 20288533 - 20288566
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||||||||||||||    
T  20288533 gagaaatgatatttgtacaaccaatttgtgacaa 20288566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 21075162 - 21075195
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||||||||||||||    
T  21075162 gagaaatgatatttgtacaaccaatttgtgacaa 21075195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 30928002 - 30927969
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||||||||||||||    
T  30928002 gagaaatgatatttgtacaaccaatttgtgacaa 30927969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 1796493 - 1796529
Alignment:
Q  195 attgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||||||| ||||||||||    
T  1796493 attgagaaatgatatttgtacaaccactttgtgacaa 1796529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 231
Target Start/End: Complemental strand, 21649000 - 21648969
Alignment:
Q  200 gaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||||||||||||    
T  21649000 gaaatgatatttgtacaaccaatttgtgacaa 21648969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Complemental strand, 21273782 - 21273748
Alignment:
Q  197 tgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||||| ||||||||||    
T  21273782 tgagaaatgatatttgtacaaccattttgtgacaa 21273748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Complemental strand, 38844862 - 38844828
Alignment:
Q  197 tgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||||| ||||||||||    
T  38844862 tgagaaatgatatttgtacaaccattttgtgacaa 38844828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Complemental strand, 43873763 - 43873729
Alignment:
Q  197 tgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||||| ||||||||||    
T  43873763 tgagaaatgatatttgtacaaccattttgtgacaa 43873729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 5502371 - 5502404
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  5502371 gagaaatgatatttgtacaaccactttgtgacaa 5502404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 12732842 - 12732875
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  12732842 gagaaatgatatttgtacaaccactttgtgacaa 12732875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 22852910 - 22852877
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  22852910 gagaaatgatatttgtacaaccactttgtgacaa 22852877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 28927681 - 28927714
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  28927681 gagaaatgatatttgtacaaccactttgtgacaa 28927714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 41273515 - 41273548
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||| |||||||||||||    
T  41273515 gagaaatgatatttgtacaaacaatttgtgacaa 41273548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 41293792 - 41293759
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||| |||||||||||||||||||    
T  41293792 gagaaatgatatttttacaaccaatttgtgacaa 41293759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 43419879 - 43419912
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||| ||||||||||||    
T  43419879 gagaaatgatatttgtacaactaatttgtgacaa 43419912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 44380685 - 44380652
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  44380685 gagaaatgatatttgtacaaccattttgtgacaa 44380652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 45101396 - 45101429
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  45101396 gagaaatgatatttgtacaaccactttgtgacaa 45101429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 226
Target Start/End: Original strand, 3650113 - 3650141
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgt 226  Q
    |||||||||||||||||||||||||||||    
T  3650113 gagaaatgatatttgtacaaccaatttgt 3650141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 231
Target Start/End: Complemental strand, 39719318 - 39719286
Alignment:
Q  199 agaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||| |||||||||||||    
T  39719318 agaaatgatatttgtacaatcaatttgtgacaa 39719286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 224
Target Start/End: Original strand, 45081396 - 45081424
Alignment:
Q  196 ttgagaaatgatatttgtacaaccaattt 224  Q
    |||||||||||||||||||||||||||||    
T  45081396 ttgagaaatgatatttgtacaaccaattt 45081424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000003; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 2056783 - 2056816
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||||||||||||||    
T  2056783 gagaaatgatatttgtacaaccaatttgtgacaa 2056816  T

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Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 9954548 - 9954581
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||||||||||||||    
T  9954548 gagaaatgatatttgtacaaccaatttgtgacaa 9954581  T

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Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Original strand, 2163701 - 2163735
Alignment:
Q  197 tgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||| |||||||||||||    
T  2163701 tgagaaatgatatttgtacaatcaatttgtgacaa 2163735  T

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Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Original strand, 2175334 - 2175368
Alignment:
Q  197 tgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||| |||||||||||||    
T  2175334 tgagaaatgatatttgtacaatcaatttgtgacaa 2175368  T

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Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Complemental strand, 3660425 - 3660391
Alignment:
Q  197 tgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||| ||||||||||||||||||||||||||    
T  3660425 tgagaaattatatttgtacaaccaatttgtgacaa 3660391  T

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Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Complemental strand, 32457324 - 32457290
Alignment:
Q  197 tgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||||| ||||||||||    
T  32457324 tgagaaatgatatttgtacaaccactttgtgacaa 32457290  T

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Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 3339570 - 3339537
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  3339570 gagaaatgatatttgtacaaccattttgtgacaa 3339537  T

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Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 11785355 - 11785388
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  11785355 gagaaatgatatttgtacaaccattttgtgacaa 11785388  T

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Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 30796146 - 30796113
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  30796146 gagaaatgatatttgtacaaccactttgtgacaa 30796113  T

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Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 231
Target Start/End: Original strand, 6435037 - 6435069
Alignment:
Q  199 agaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||| ||||||||||    
T  6435037 agaaatgatatttgtacaaccactttgtgacaa 6435069  T

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Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 227
Target Start/End: Original strand, 25554242 - 25554274
Alignment:
Q  195 attgagaaatgatatttgtacaaccaatttgtg 227  Q
    |||||||||||||||||||||||||| ||||||    
T  25554242 attgagaaatgatatttgtacaaccattttgtg 25554274  T

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Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 227
Target Start/End: Original strand, 25995439 - 25995471
Alignment:
Q  195 attgagaaatgatatttgtacaaccaatttgtg 227  Q
    |||||||||||||||||||||||||| ||||||    
T  25995439 attgagaaatgatatttgtacaaccattttgtg 25995471  T

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Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 227
Target Start/End: Original strand, 26094902 - 26094934
Alignment:
Q  195 attgagaaatgatatttgtacaaccaatttgtg 227  Q
    |||||||||||||||||||||||||| ||||||    
T  26094902 attgagaaatgatatttgtacaaccattttgtg 26094934  T

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Target: scaffold0286 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Complemental strand, 18708 - 18674
Alignment:
Q  197 tgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||||||| |||||||||||||    
T  18708 tgagaaatgatatttgtacaatcaatttgtgacaa 18674  T

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Target: scaffold0026 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Original strand, 113624 - 113658
Alignment:
Q  197 tgagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||||| ||||||||||    
T  113624 tgagaaatgatatttgtacaaccactttgtgacaa 113658  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 228
Target Start/End: Original strand, 88808 - 88838
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtga 228  Q
    |||||||||||||||||||||||||||||||    
T  88808 gagaaatgatatttgtacaaccaatttgtga 88838  T

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Target: scaffold0514 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 1567 - 1534
Alignment:
Q  198 gagaaatgatatttgtacaaccaatttgtgacaa 231  Q
    ||||||||||||||||| ||||||||||||||||    
T  1567 gagaaatgatatttgtataaccaatttgtgacaa 1534  T

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Target: scaffold0131 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 231
Target Start/End: Complemental strand, 15604 - 15572
Alignment:
Q  199 agaaatgatatttgtacaaccaatttgtgacaa 231  Q
    |||||||||||||||||||||| ||||||||||    
T  15604 agaaatgatatttgtacaaccactttgtgacaa 15572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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