View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8587_high_7 (Length: 335)
Name: NF8587_high_7
Description: NF8587
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8587_high_7 |
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Alignment Details
Target: chr2 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 15 - 322
Target Start/End: Original strand, 37662745 - 37663065
Alignment:
| Q |
15 |
tcatattctgcctcagaaattcacttataaagaactcagttctcttcctgttaggactcttttgaagactttgatgcctcatgatcatcttgaaattgat |
114 |
Q |
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| T |
37662745 |
tcatattctgcctcagaaattcacttataaagaactcagttctcttcctgttaggactcttttgaagactttgacgcctcatgatcatcttgaaattgat |
37662844 |
T |
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| Q |
115 |
ggagttcttggttttatggagggtgttcttatcaatgggattcagattgtgaagcctgatatgtttgtttcagagaaatttgttgttcatggaatttcaa |
214 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37662845 |
ggagttcttggttttatggagggtgttcttattaatgggattcagattgtgaagcctgatatgtttgtttcagagaaatttgttgttcatggaatttcaa |
37662944 |
T |
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| Q |
215 |
gagcttttaagatggc-------------tgagattactgcttgaagatgttgaaattagttaagggtcaatttgtcacaatatgtgtataggttttaca |
301 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37662945 |
gagcttttaagatggctgagattactgcttgagattactgcttgaagatgttgaaattagttaagggtcaatttgtcacaatatgtgtataggttttaca |
37663044 |
T |
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| Q |
302 |
ttttgatgcaatcatgtaaat |
322 |
Q |
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||||||||||||||||||||| |
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| T |
37663045 |
ttttgatgcaatcatgtaaat |
37663065 |
T |
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