View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8588_low_6 (Length: 256)

Name: NF8588_low_6
Description: NF8588
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8588_low_6
NF8588_low_6
[»] chr1 (43 HSPs)
chr1 (1-188)||(9172307-9172495)
chr1 (1-188)||(9180289-9180477)
chr1 (1-210)||(51871662-51871868)
chr1 (1-209)||(7342520-7342727)
chr1 (1-184)||(51868721-51868903)
chr1 (1-195)||(50166175-50166367)
chr1 (1-184)||(25406360-25406542)
chr1 (1-200)||(5701064-5701264)
chr1 (3-198)||(40646497-40646692)
chr1 (1-169)||(40881088-40881256)
chr1 (1-194)||(5324634-5324825)
chr1 (1-187)||(14545340-14545524)
chr1 (1-183)||(50148196-50148379)
chr1 (1-200)||(19715970-19716170)
chr1 (1-169)||(30818422-30818588)
chr1 (1-128)||(28035018-28035144)
chr1 (1-200)||(27872550-27872743)
chr1 (1-78)||(11453865-11453940)
chr1 (1-78)||(34519062-34519137)
chr1 (33-194)||(18569417-18569576)
chr1 (1-194)||(33291494-33291687)
chr1 (1-165)||(19723176-19723338)
chr1 (1-178)||(35584694-35584873)
chr1 (1-145)||(50272216-50272359)
chr1 (1-74)||(3871342-3871413)
chr1 (31-145)||(25728064-25728178)
chr1 (1-145)||(20266163-20266307)
chr1 (1-145)||(30878937-30879081)
chr1 (39-197)||(45805922-45806081)
chr1 (1-194)||(45426142-45426331)
chr1 (1-75)||(7997719-7997794)
chr1 (1-68)||(31836745-31836812)
chr1 (1-78)||(38520610-38520685)
chr1 (1-78)||(9919318-9919394)
chr1 (1-75)||(44637354-44637426)
chr1 (5-77)||(30558736-30558805)
chr1 (135-200)||(31836673-31836738)
chr1 (151-200)||(9919233-9919282)
chr1 (28-144)||(7312200-7312316)
chr1 (31-69)||(9687318-9687356)
chr1 (97-169)||(11453773-11453845)
chr1 (97-200)||(41081875-41081982)
chr1 (30-74)||(41081807-41081851)
[»] chr5 (37 HSPs)
chr5 (1-208)||(19281021-19281226)
chr5 (1-188)||(7246776-7246962)
chr5 (1-188)||(7241600-7241786)
chr5 (1-191)||(27266935-27267125)
chr5 (1-200)||(30371530-30371729)
chr5 (1-177)||(7150411-7150586)
chr5 (1-203)||(7887014-7887214)
chr5 (1-178)||(18677541-18677718)
chr5 (8-203)||(26578053-26578248)
chr5 (1-200)||(34881516-34881721)
chr5 (1-194)||(36344567-36344757)
chr5 (1-199)||(19259887-19260081)
chr5 (5-144)||(16981152-16981289)
chr5 (1-187)||(21060358-21060542)
chr5 (1-203)||(43261895-43262094)
chr5 (3-144)||(28235447-28235586)
chr5 (31-142)||(10649317-10649428)
chr5 (1-128)||(781267-781392)
chr5 (1-75)||(27751857-27751929)
chr5 (1-75)||(30298139-30298211)
chr5 (1-201)||(42579682-42579891)
chr5 (1-115)||(2057914-2058027)
chr5 (1-178)||(3271478-3271658)
chr5 (1-138)||(35475413-35475548)
chr5 (1-194)||(41184516-41184712)
chr5 (96-197)||(27751723-27751824)
chr5 (31-78)||(20257799-20257846)
chr5 (24-78)||(42432828-42432882)
chr5 (1-78)||(43148658-43148734)
chr5 (24-78)||(27576447-27576501)
chr5 (89-176)||(4953910-4953999)
chr5 (1-78)||(42886407-42886481)
chr5 (39-76)||(1696979-1697016)
chr5 (28-75)||(35631792-35631839)
chr5 (28-78)||(6445864-6445914)
chr5 (32-78)||(7613162-7613208)
chr5 (38-74)||(10148730-10148766)
[»] chr8 (31 HSPs)
chr8 (1-204)||(9072523-9072726)
chr8 (1-185)||(33895907-33896090)
chr8 (1-198)||(11196704-11196897)
chr8 (1-200)||(9619433-9619632)
chr8 (1-200)||(14906999-14907198)
chr8 (1-185)||(11725507-11725689)
chr8 (1-194)||(44100010-44100200)
chr8 (1-194)||(11463988-11464179)
chr8 (1-188)||(9498675-9498863)
chr8 (1-208)||(29777031-29777227)
chr8 (1-171)||(4808803-4808972)
chr8 (2-139)||(42448104-42448241)
chr8 (1-145)||(2655734-2655878)
chr8 (4-204)||(19876023-19876216)
chr8 (1-144)||(34611670-34611812)
chr8 (1-191)||(43890200-43890390)
chr8 (1-200)||(44577848-44578044)
chr8 (1-178)||(35580289-35580465)
chr8 (3-184)||(17949073-17949253)
chr8 (28-199)||(33342250-33342420)
chr8 (31-201)||(32724594-32724765)
chr8 (1-78)||(43192422-43192497)
chr8 (33-179)||(28239664-28239811)
chr8 (1-78)||(37565955-37566031)
chr8 (28-74)||(15597268-15597314)
chr8 (24-78)||(33298788-33298842)
chr8 (28-78)||(17430970-17431020)
chr8 (32-78)||(12184217-12184263)
chr8 (32-78)||(12428645-12428691)
chr8 (28-78)||(17427320-17427370)
chr8 (1-74)||(39153218-39153293)
[»] chr2 (42 HSPs)
chr2 (1-200)||(45128012-45128209)
chr2 (1-194)||(6173445-6173637)
chr2 (1-199)||(30420485-30420683)
chr2 (1-171)||(32680657-32680826)
chr2 (1-194)||(21570483-21570676)
chr2 (1-199)||(2808548-2808743)
chr2 (1-199)||(34598795-34598992)
chr2 (1-198)||(36233814-36234013)
chr2 (1-191)||(9986418-9986612)
chr2 (1-199)||(3270305-3270501)
chr2 (1-199)||(41712841-41713038)
chr2 (1-145)||(7015787-7015929)
chr2 (1-196)||(27249227-27249421)
chr2 (1-191)||(8971703-8971893)
chr2 (1-178)||(40626104-40626279)
chr2 (1-193)||(20047158-20047348)
chr2 (1-128)||(32913121-32913246)
chr2 (1-144)||(40660008-40660146)
chr2 (1-78)||(22421665-22421740)
chr2 (10-204)||(27476958-27477150)
chr2 (1-181)||(3725007-3725185)
chr2 (3-131)||(4228008-4228136)
chr2 (1-207)||(26025486-26025691)
chr2 (1-185)||(4192661-4192843)
chr2 (1-204)||(25086839-25087042)
chr2 (1-65)||(3269187-3269251)
chr2 (1-65)||(3269746-3269810)
chr2 (31-144)||(459379-459492)
chr2 (1-75)||(8805799-8805871)
chr2 (1-78)||(27949352-27949431)
chr2 (1-75)||(41430960-41431033)
chr2 (27-78)||(31581820-31581871)
chr2 (31-144)||(42949577-42949691)
chr2 (10-78)||(39641943-39642011)
chr2 (90-199)||(33229152-33229261)
chr2 (112-200)||(31581888-31581976)
chr2 (28-77)||(17319254-17319302)
chr2 (24-76)||(36323790-36323842)
chr2 (28-78)||(8308104-8308152)
chr2 (98-157)||(9374721-9374780)
chr2 (1-75)||(32197871-32197943)
chr2 (41-78)||(18694977-18695014)
[»] chr6 (22 HSPs)
chr6 (1-198)||(23947394-23947589)
chr6 (1-200)||(25064038-25064237)
chr6 (1-209)||(16418953-16419159)
chr6 (1-199)||(12652744-12652945)
chr6 (31-200)||(8496768-8496937)
chr6 (2-144)||(33740655-33740796)
chr6 (3-194)||(10228493-10228678)
chr6 (1-178)||(17237361-17237536)
chr6 (1-125)||(4468437-4468559)
chr6 (9-188)||(33109649-33109826)
chr6 (1-199)||(8028194-8028391)
chr6 (1-143)||(4088319-4088461)
chr6 (1-144)||(7876120-7876263)
chr6 (1-144)||(8196483-8196624)
chr6 (1-187)||(12165657-12165841)
chr6 (1-198)||(17334582-17334779)
chr6 (1-144)||(7881178-7881321)
chr6 (1-78)||(35001515-35001591)
chr6 (1-144)||(4984643-4984795)
chr6 (1-190)||(34489061-34489251)
chr6 (31-74)||(25337499-25337542)
chr6 (162-195)||(5582880-5582913)
[»] chr3 (39 HSPs)
chr3 (31-207)||(3850560-3850733)
chr3 (1-194)||(46934449-46934640)
chr3 (3-200)||(38855114-38855310)
chr3 (1-197)||(32607271-32607467)
chr3 (1-200)||(44907474-44907672)
chr3 (1-195)||(36905927-36906120)
chr3 (3-200)||(50611495-50611691)
chr3 (1-187)||(29503275-29503460)
chr3 (1-172)||(25631602-25631773)
chr3 (1-199)||(4178366-4178563)
chr3 (1-144)||(49552300-49552441)
chr3 (1-199)||(4172368-4172565)
chr3 (1-195)||(25162242-25162434)
chr3 (1-194)||(39917473-39917664)
chr3 (1-196)||(12115898-12116095)
chr3 (1-144)||(38440654-38440795)
chr3 (1-145)||(14464363-14464508)
chr3 (1-197)||(51202330-51202520)
chr3 (1-133)||(17237670-17237803)
chr3 (1-199)||(2342294-2342490)
chr3 (1-143)||(35499274-35499419)
chr3 (1-67)||(30648795-30648860)
chr3 (90-200)||(30648904-30649012)
chr3 (28-128)||(46178449-46178550)
chr3 (40-78)||(31794002-31794040)
chr3 (24-125)||(22802897-22802999)
chr3 (90-163)||(36735316-36735389)
chr3 (1-78)||(42719443-42719515)
chr3 (97-194)||(47980839-47980935)
chr3 (97-194)||(47990126-47990222)
chr3 (97-194)||(47999413-47999509)
chr3 (97-194)||(48008700-48008796)
chr3 (1-36)||(3848995-3849030)
chr3 (90-128)||(6823561-6823599)
chr3 (171-205)||(19222413-19222447)
chr3 (27-73)||(33579772-33579817)
chr3 (95-200)||(25849622-25849726)
chr3 (29-73)||(6913249-6913293)
chr3 (3-78)||(30829897-30829970)
[»] chr7 (39 HSPs)
chr7 (1-194)||(22927946-22928138)
chr7 (2-199)||(42311084-42311280)
chr7 (1-198)||(46821819-46822016)
chr7 (1-200)||(23085325-23085522)
chr7 (1-200)||(26583517-26583715)
chr7 (1-193)||(1485333-1485521)
chr7 (1-200)||(2843305-2843501)
chr7 (1-198)||(35667308-35667502)
chr7 (1-201)||(26492167-26492366)
chr7 (12-198)||(20116388-20116572)
chr7 (1-200)||(21266195-21266391)
chr7 (1-177)||(35496251-35496426)
chr7 (1-195)||(1448906-1449098)
chr7 (2-175)||(433769-433939)
chr7 (1-128)||(23425448-23425573)
chr7 (96-201)||(12539125-12539230)
chr7 (32-200)||(32684486-32684656)
chr7 (1-128)||(48207778-48207902)
chr7 (1-171)||(46338885-46339055)
chr7 (3-125)||(42067139-42067259)
chr7 (1-173)||(45199108-45199278)
chr7 (1-140)||(42408225-42408363)
chr7 (1-64)||(17223075-17223136)
chr7 (2-179)||(31235869-31236045)
chr7 (1-78)||(14627955-14628031)
chr7 (28-194)||(32522028-32522198)
chr7 (1-62)||(6558817-6558878)
chr7 (4-67)||(17499738-17499799)
chr7 (4-67)||(17553415-17553476)
chr7 (28-78)||(36143791-36143841)
chr7 (31-72)||(7640887-7640928)
chr7 (1-72)||(23786508-23786576)
chr7 (31-78)||(5546284-5546331)
chr7 (6-75)||(7740568-7740635)
chr7 (90-128)||(17611006-17611044)
chr7 (32-73)||(3860882-3860923)
chr7 (28-69)||(43369867-43369908)
chr7 (5-73)||(24770161-24770228)
chr7 (151-199)||(45630065-45630113)
[»] chr4 (49 HSPs)
chr4 (1-209)||(6972616-6972823)
chr4 (1-194)||(56194417-56194614)
chr4 (1-198)||(10389830-10390025)
chr4 (1-196)||(1531725-1531921)
chr4 (3-199)||(9528955-9529151)
chr4 (1-187)||(53616726-53616912)
chr4 (1-198)||(9283728-9283924)
chr4 (1-200)||(20569067-20569268)
chr4 (1-193)||(9645625-9645816)
chr4 (1-201)||(25273689-25273896)
chr4 (1-144)||(34024513-34024654)
chr4 (1-199)||(31381748-31381944)
chr4 (1-200)||(50766585-50766785)
chr4 (1-190)||(43444218-43444406)
chr4 (95-209)||(5333699-5333811)
chr4 (1-194)||(867978-868175)
chr4 (1-144)||(38706786-38706928)
chr4 (1-188)||(4643683-4643871)
chr4 (1-200)||(10359623-10359821)
chr4 (1-144)||(51317856-51317998)
chr4 (8-172)||(21089995-21090158)
chr4 (31-201)||(43154126-43154295)
chr4 (31-197)||(47416703-47416868)
chr4 (1-185)||(37188670-37188851)
chr4 (1-145)||(2115663-2115807)
chr4 (1-78)||(8009437-8009511)
chr4 (1-75)||(29965574-29965648)
chr4 (1-202)||(44947216-44947425)
chr4 (31-143)||(35965079-35965192)
chr4 (31-194)||(2624318-2624482)
chr4 (33-167)||(12265302-12265438)
chr4 (1-75)||(35261132-35261204)
chr4 (1-78)||(14183740-14183816)
chr4 (28-140)||(18139014-18139127)
chr4 (28-140)||(49126227-49126340)
chr4 (1-75)||(49680477-49680554)
chr4 (4-67)||(1931795-1931856)
chr4 (3-78)||(32952826-32952898)
chr4 (40-188)||(27593952-27594098)
chr4 (122-197)||(29965493-29965568)
chr4 (31-78)||(46991235-46991282)
chr4 (29-75)||(35351263-35351309)
chr4 (100-167)||(35261036-35261102)
chr4 (97-188)||(50179598-50179689)
chr4 (28-78)||(1008232-1008282)
chr4 (163-200)||(3338887-3338924)
chr4 (42-78)||(21405450-21405486)
chr4 (30-78)||(26123200-26123248)
chr4 (27-75)||(49072858-49072906)
[»] scaffold0311 (1 HSPs)
scaffold0311 (1-144)||(8579-8720)
[»] scaffold0495 (1 HSPs)
scaffold0495 (3-194)||(5212-5397)
[»] scaffold0426 (1 HSPs)
scaffold0426 (46-202)||(6140-6295)
[»] scaffold0146 (1 HSPs)
scaffold0146 (1-133)||(16396-16529)
[»] scaffold0014 (1 HSPs)
scaffold0014 (3-75)||(201450-201520)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-199)||(361875-362067)
[»] scaffold0608 (1 HSPs)
scaffold0608 (97-188)||(57-148)


Alignment Details
Target: chr1 (Bit Score: 128; Significance: 3e-66; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 9172495 - 9172307
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaa-cctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtg 99  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||       ||| ||||||||||    
T  9172495 accacacttagatgataaaatcacacaaagaaaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagaaaaaaatatgaagaggggtg 9172396  T
Q  100 atttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgtt 188  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||    
T  9172395 atttcaggtcaagaattgacccaaaaccaccccccaatgaagaaatgggatgagaaaacttagtgagagaaaattagggccggcttgtt 9172307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 9180477 - 9180289
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaa-cctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtg 99  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||       ||| ||||||||||    
T  9180477 accacacttagatgataaaatcacacaaagaaaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagaaaaaaatatgaagaggggtg 9180378  T
Q  100 atttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgtt 188  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||    
T  9180377 atttcaggtcaagaattgacccaaaaccaccccccaatgaagaaatgggatgagaaaacttagtgagagaaaattagggccggcttgtt 9180289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 51871868 - 51871662
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||||||||||||||||||||||  ||||||||| |||||||||||||||| ||||||||||||||||||||||||        || |||||||||||    
T  51871868 accacacttagatgatgaaatcaca--aagaaaaaagctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagaggggtga 51871771  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggagag 200  Q
    ||| |||||||||||||||| ||||||| ||||||||||||||| |||| |||||||| ||||||||||||||||||| || ||||||||||||||||||    
T  51871770 ttttaggtcaagaattgacccaaaacca-cccccaatgaagaaacgagaagagaaaacctagagagagaaaattagggccgacttgttggagagggagag 51871672  T
Q  201 gaagagtata 210  Q
    ||||||||||    
T  51871671 gaagagtata 51871662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 7342727 - 7342520
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||||||| | | ||||||| |||||||| || ||| |||||||||||||||||||||||        ||| |||||||||||    
T  7342727 accacacttagatgatgaaatcacaaaga-aaaaaacatagatctacgtaaaagtcacttatttagattgaaatagataaaaaaatatgaagaggggtga 7342629  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggagag 200  Q
    ||||||||||| |||||||| ||||||| ||||||||||||||| | || |||||||| ||||||||||||||||||| |||||| ||||||||||||||    
T  7342628 tttcaggtcaaaaattgacccaaaaccaccccccaatgaagaaacgggaagagaaaacctagagagagaaaattagggccggcttattggagagggagag 7342529  T
Q  201 gaagagtat 209  Q
    |||||||||    
T  7342528 gaagagtat 7342520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 51868721 - 51868903
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||||||| | | ||||||||||||||||||||||| ||||||||||||||||||||||||        || |||||||||||    
T  51868721 accacacttagatgatgaaatcacaaaga-aaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagaggggtga 51868819  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggct 184  Q
    |||||||||||||||| ||| ||||||| ||||||||||||||| | || |||||||| || ||||||||||||||||||||||    
T  51868820 tttcaggtcaagaattaacccaaaaccaccccccaatgaagaaacgggaagagaaaacctaaagagagaaaattagggtcggct 51868903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 50166175 - 50166367
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||||||| | | |||||||||| ||||||||||||||||||||||||||||||||||||         |||||||||||  |    
T  50166175 accacacttagatgatgaaatcacataga-aaaaaacctaaatctatgtgaaattcacttatttagattgaaatagatagaaaaagataaagaggggcaa 50166273  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagg 195  Q
    ||||||||||| |||||||| ||||||| ||||||||||||||| | || |||||||| |||||||||||||||| || ||||||||||||||||    
T  50166274 tttcaggtcaataattgacccaaaacca-cccccaatgaagaaacgggaagagaaaacctagagagagaaaattatgggcggcttgttggagagg 50166367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 25406360 - 25406542
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||| ||||||||| | | ||||||||||||||||||||||| ||||||||||||||||||||||||        || |||||| ||||    
T  25406360 accacacttagatgacgaaatcacaaaga-aaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagaggtgtga 25406458  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggct 184  Q
    |||||||||||||||||||| |||| || ||||||||||||||| | || || |||||||||||| ||||||||| || |||||    
T  25406459 tttcaggtcaagaattgacccaaaatcaccccccaatgaagaaacgggaagaaaaaacttagagaaagaaaattaaggccggct 25406542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 5701264 - 5701064
Alignment:
Q  1 accacacttagatgatgaaatcacaca-aagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtg 99  Q
    ||||||||||||||||||||| ||| | || ||||||||||||||||||||||| ||||||||||| ||||||||| ||        || ||||||||||    
T  5701264 accacacttagatgatgaaattacaaagaaaaaaaaacctagatctatgtgaaaatcacttatttaaattgaaataaagagaaaaagatgaagaggggtg 5701165  T
Q  100 atttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggaga 199  Q
    ||||||||||||| ||||||| |||  || ||| |||| |||||||   | |||||||||||||||||||||| ||||| |||||| |||||||||||||    
T  5701164 atttcaggtcaagtattgacccaaagtcacccctcaataaagaaattgtaagagaaaacttagagagagaaaactagggccggcttattggagagggaga 5701065  T
Q  200 g 200  Q
    |    
T  5701064 g 5701064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 198
Target Start/End: Complemental strand, 40646692 - 40646497
Alignment:
Q  3 cacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtgatt 102  Q
    ||||||||||||||||||| ||| | | |||||||||||||||| |||||| ||||||||||||||||||||| |         || |||| | ||||||    
T  40646692 cacacttagatgatgaaattacaaagaaaaaaaacctagatctacgtgaaaatcacttatttagattgaaataaatagaaaaagatgaagatgagtgatt 40646593  T
Q  103 tcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggag 198  Q
    | |||||||||||||||| ||||||| ||| ||||||||||||   | |||||||| ||||||||||||| ||||| |||||||||||||||||||    
T  40646592 ttaggtcaagaattgacccaaaaccacccctcaatgaagaaattgtaagagaaaacctagagagagaaaactagggccggcttgttggagagggag 40646497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 40881088 - 40881256
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||||||||||||||||||| || ||| |||||||||||||||| |||||| ||||| ||||||||||||||||||        || |||| | ||||    
T  40881088 accacacttagatgatgaaatctcaaaaaaaaaaaacctagatctaagtgaaaatcactcatttagattgaaatagagagaaaaagatgaagatgagtga 40881187  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagaga 169  Q
    ||| |||||||||||||||| ||||||||||| ||||||||||| |  | |||||||| ||||||||||    
T  40881188 ttttaggtcaagaattgacccaaaaccatccctcaatgaagaaacggtaagagaaaacctagagagaga 40881256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 5324634 - 5324825
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||||||||||||||||||||||  ||| |||||| || || || |||||| ||||||||||||||||||||||||        || ||||| |||||    
T  5324634 accacacttagatgatgaaatcaca--aaggaaaaacttaaatttacgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagagaggtga 5324731  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagag 194  Q
    || ||||||||||||||||| |||| |||||| |||||||||||   || |||||||  |||||||||||||||||||  | ||||||||||||    
T  5324732 ttccaggtcaagaattgacccaaaatcatccctcaatgaagaaacttgaagagaaaatctagagagagaaaattagggctgacttgttggagag 5324825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 14545524 - 14545340
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||| ||        || |||| | ||||    
T  14545524 accacacttagatgatgaaatcaca--aagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatatagagaaaaagatgaagatgagtga 14545427  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgt 187  Q
    |||||||||||||||||||  ||||||| | | | ||| | ||   ||| |||||||| ||||||||||||| ||||| ||||||||    
T  14545426 tttcaggtcaagaattgacacaaaaccaccgctcgatggaaaatctagaagagaaaacctagagagagaaaactagggccggcttgt 14545340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 50148379 - 50148196
Alignment:
Q  1 accacacttagatgatgaaatcacaca-aagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtg 99  Q
    |||||||||||| |||||||| ||| | || ||||||||||||||||||||||| ||||||||||||||| ||||| ||        || |||| || ||    
T  50148379 accacacttagaagatgaaattacaaagaaaaaaaaacctagatctatgtgaaaatcacttatttagattaaaataaagagaaaaggatgaagatggatg 50148280  T
Q  100 atttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggc 183  Q
    ||||||| || |||||||||| ||||||| ||| |||||||||||| | | |||||||  ||||||||||||| ||||||||||    
T  50148279 atttcagatctagaattgacccaaaaccacccctcaatgaagaaattataagagaaaatctagagagagaaaactagggtcggc 50148196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 19715970 - 19716170
Alignment:
Q  1 accacacttagatgatgaaatcacac--aaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggt 98  Q
    ||||||||||||||||||||| |||   ||| |||||||||| |||||||||||| ||||||||||||||||||||| ||        || |||| ||||    
T  19715970 accacacttagatgatgaaattacaatgaaaaaaaaaacctaaatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga-gggt 19716068  T
Q  99 gatttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggag 198  Q
    |||||||| ||||||||||||| ||||||| | | ||||||||||||   | || ||||| || |||||||||| ||||| || ||||||| ||||||||    
T  19716069 gatttcagatcaagaattgacccaaaaccacctctcaatgaagaaattgtaagaaaaaacctaaagagagaaaactagggccgacttgttgaagagggag 19716168  T
Q  199 ag 200  Q
    ||    
T  19716169 ag 19716170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 30818422 - 30818588
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||||||| ||| |||||  |||||| ||||||||| ||||||||||||||||||||||||        || |||| ||||||    
T  30818422 accacacttagatgatgaaatcacaaaaaaaaaaa--ctagatttatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagatgggtga 30818519  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagaga 169  Q
    ||||||||||| |||||||| ||||| | ||| |||||||||||    |  ||||||||||||||||||    
T  30818520 tttcaggtcaataattgacccaaaactacccctcaatgaagaaactgtaaaagaaaacttagagagaga 30818588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 28035144 - 28035018
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||||||| | | ||||||||||||||||||||||| ||||||||||||||||||||||||        || |||| | ||||    
T  28035144 accacacttagatgatgaaatcacaaaga-aaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagatgagtga 28035046  T
Q  101 tttcaggtcaagaattgacctaaaacca 128  Q
    ||||||||||| |||||||| |||||||    
T  28035045 tttcaggtcaataattgacccaaaacca 28035018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 27872743 - 27872550
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||| ||||||   |||||||||| ||||||||||||||| ||||||||||||||||||||||||        || |||| ||||||    
T  27872743 accacacttagatgatgcaatcacg--aagaaaaaacttagatctatgtgaaaatcacttatttagattgaaatagagcgaaaaagatgaagatgggtga 27872646  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttag--agagagaaaattagggtcggcttgttggagagggag 198  Q
    ||||| ||||| |||||||| ||||||| ||      |||||||  ||| |||||||| |||  ||||| |||||||||| || |||||| |||||||||    
T  27872645 tttcatgtcaaaaattgacccaaaaccaccc------gaagaaactagaagagaaaacctagaaagagaaaaaattagggccgacttgttagagagggag 27872552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 11453940 - 11453865
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagag 78  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  11453940 accacacttagatgatgaaatcaca--aagaaaaaacctagatctatgtgaaaaccacttatttagattgaaatagag 11453865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 34519137 - 34519062
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagag 78  Q
    ||||||||||||||||||||||| |  |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  34519137 accacacttagatgatgaaatcaaa--aagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagag 34519062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 33 - 194
Target Start/End: Original strand, 18569417 - 18569576
Alignment:
Q  33 aaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtgatttcaggtcaagaattgacctaaaaccatccc 132  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||        || ||||  |||||||||  ||||| |||||||| ||||||| |||    
T  18569417 aaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagacaggtgatttcttgtcaaaaattgacccaaaaccacccc 18569516  T
Q  133 ccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagag 194  Q
     |||||||||||   || |||||||| |  |||||||||||||||  |||||||||||||||    
T  18569517 tcaatgaagaaactggaagagaaaacct--agagagaaaattaggaccggcttgttggagag 18569576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 33291494 - 33291687
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatag-agnnnnnnntataaagaggggtg 99  Q
    ||||||||||||||||||||||||| | | ||||||| ||||| ||||||||| ||||||||||| |||||||||| |         || ||||||||||    
T  33291494 accacacttagatgatgaaatcacaaaga-aaaaaacatagatttatgtgaaaatcacttatttatattgaaatagaaagaaaaaaaatgaagaggggtg 33291592  T
Q  100 atttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagag 194  Q
    ||||||||||||||||||||| ||||||| ||| ||||||| |||  | | || ||||  |||||| |||||| ||||| || ||||||| ||||    
T  33291593 atttcaggtcaagaattgacccaaaaccacccctcaatgaaaaaactataagaaaaaatctagagaaagaaaactagggccgacttgttgaagag 33291687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 19723338 - 19723176
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagag-nnnnnnntataaagaggggtg 99  Q
    ||||||||||||||||||||||||| | | ||||||||||||||||||||||| |||||||||||||||| |||||||        ||| ||||| ||||    
T  19723338 accacacttagatgatgaaatcacaaaga-aaaaaacctagatctatgtgaaaatcacttatttagattg-aatagagagaaaaaatatgaagagaggtg 19723241  T
Q  100 atttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagaga 165  Q
    |||||| ||||| |||||||| ||||||| ||| |||||||||||  | | |||||||| ||||||    
T  19723240 atttcaagtcaataattgacccaaaacca-ccctcaatgaagaaactataagagaaaacctagaga 19723176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 35584694 - 35584873
Alignment:
Q  1 accacacttagatgatgaaatcacaca--aagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggt 98  Q
    ||||||||||||| || |||| ||| |  || ||||||||||||||||||||||| ||||||||||||||||||||| ||        || |||| | ||    
T  35584694 accacacttagattataaaattacaaagaaaaaaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagatgagt 35584793  T
Q  99 gatttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattaggg 178  Q
    |||||||||| ||||||||||| |||| || ||| ||||||||||||   | |||||||| |||||| |||||| |||||    
T  35584794 gatttcaggttaagaattgacccaaaatcacccctcaatgaagaaattgtaagagaaaacctagagaaagaaaactaggg 35584873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 50272216 - 50272359
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||| ||||||| |||||||||||| | | ||||||| ||||||||||||||| | ||||||||||||||||||| ||        || || ||||||||    
T  50272216 accaaacttagaagatgaaatcacaaaga-aaaaaacttagatctatgtgaaaattacttatttagattgaaataaagagaaaaagatgaataggggtga 50272314  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaat 145  Q
    |||||||||||||||||||| ||||||| ||  ||||||||||||    
T  50272315 tttcaggtcaagaattgacccaaaaccacccttcaatgaagaaat 50272359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 3871413 - 3871342
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaat 74  Q
    |||||||||||||||||||||||||  |||||||||| ||||||||||||||| ||||||||||||||||||||    
T  3871413 accacacttagatgatgaaatcaca--aagaaaaaacttagatctatgtgaaaatcacttatttagattgaaat 3871342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 31 - 145
Target Start/End: Original strand, 25728064 - 25728178
Alignment:
Q  31 aaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtgatttcaggtcaagaattgacctaaaaccatc 130  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||        || |||||| |||||||||||||||||||||||| ||||||| |    
T  25728064 aaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggagtgatttcaggtcaagaattgacccaaaaccacc 25728163  T
Q  131 ccccaatgaagaaat 145  Q
    |  || |||||||||    
T  25728164 cgtcattgaagaaat 25728178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 20266307 - 20266163
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||| ||| | | |||||| |||||||||||||||| ||||||||||||||||||||| ||        || |||| ||||||    
T  20266307 accacacttagatgatgaaattacaaaga-aaaaaagctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagatgggtga 20266209  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccc-caatgaagaaat 145  Q
    ||| || ||||||||||||| ||||||| |||| | ||||||||||    
T  20266208 ttttagatcaagaattgacccaaaaccaccccctcgatgaagaaat 20266163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 30879081 - 30878937
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||||||| |||||||||| ||| | | ||||||| ||||||||||||||| ||||||||||||||| ||||| ||        || ||||| | |||    
T  30879081 accacacttaaatgatgaaattacaaagaaaaaaaacatagatctatgtgaaaatcacttatttagattaaaataaagagaaaaagatgaagagagatga 30878982  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaat 145  Q
    | ||||||||| |||||||| ||||||| ||| ||||||||||||    
T  30878981 tctcaggtcaaaaattgacccaaaaccacccctcaatgaagaaat 30878937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 197
Target Start/End: Original strand, 45805922 - 45806081
Alignment:
Q  39 tagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtgatttcaggtcaagaattgacctaaaaccatccccc-aat 137  Q
    ||||| ||||||||| ||||||||||||||||||||||||        |  ||||  ||||||||||| |||| |||||||| ||||||| ||||| |||    
T  45805922 tagatttatgtgaaagtcacttatttagattgaaatagagagaaaaagaggaagaaaggtgatttcagatcaaaaattgacccaaaaccacccccccaat 45806021  T
Q  138 gaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagaggga 197  Q
     |||||| | || |||||||  ||||||||||||||||||  || |||||||||||||||    
T  45806022 aaagaaacgggaagagaaaatctagagagagaaaattaggaccgacttgttggagaggga 45806081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 45426142 - 45426331
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||||||||||||||||||||||     ||||||| ||||||||||||||| ||||||||||||||| ||||||||        || || |  |||||    
T  45426142 accacacttagatgatgaaatcaca-----aaaaaacttagatctatgtgaaaatcacttatttagatttaaatagagagaaaaagatgaaaataggtga 45426236  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccc-caatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagag 194  Q
    |||||  ||||||||||||| ||||||| |||| |||||||||||   ||  ||||||| |||||||| ||||  |||| |||||| || |||||    
T  45426237 tttcaaatcaagaattgacccaaaaccaccccctcaatgaagaaactggaaaagaaaacctagagagaaaaaaccagggccggctttttcgagag 45426331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 7997794 - 7997719
Alignment:
Q  1 accacacttagatgatgaaatcacaca-aagaaaaaacctagatctatgtgaaattcacttatttagattgaaata 75  Q
    ||||||||||||||||||||| ||| | || ||||||||||||||||||||||| ||||||||||| |||||||||    
T  7997794 accacacttagatgatgaaattacaaagaaaaaaaaacctagatctatgtgaaaatcacttatttatattgaaata 7997719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 31836812 - 31836745
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagat 68  Q
    ||||||||||||||||||||| ||| | | ||||||||||||||||||||||| ||||||||||||||    
T  31836812 accacacttagatgatgaaattacaaagaaaaaaaacctagatctatgtgaaaatcacttatttagat 31836745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 38520610 - 38520685
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagag 78  Q
    ||||| ||||||||||||||||||   |||||||||| ||||||||||||||| |||||||||||||| |||||||||    
T  38520610 accactcttagatgatgaaatcacg--aagaaaaaacatagatctatgtgaaaatcacttatttagatcgaaatagag 38520685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 9919394 - 9919318
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagag 78  Q
    |||||||||||||| |||||||||| | | ||||||| ||||||||||| ||| ||||||||||||||||||||||||    
T  9919394 accacacttagatggtgaaatcacaaaga-aaaaaacatagatctatgtaaaaatcacttatttagattgaaatagag 9919318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 44637426 - 44637354
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaata 75  Q
    |||||| |||||||| |||||||||  ||||| |||| |||||||| |||||| |||||||||||||||||||||    
T  44637426 accacatttagatgacgaaatcaca--aagaagaaacttagatctacgtgaaaatcacttatttagattgaaata 44637354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 30558736 - 30558805
Alignment:
Q  5 cacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaataga 77  Q
    |||| |||||||||||||| |  |||||||||||||||||| ||||||| |||||| ||||||||||||||||    
T  30558736 cactcagatgatgaaatcata--aagaaaaaacctagatctgtgtgaaa-tcacttttttagattgaaataga 30558805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 31836738 - 31836673
Alignment:
Q  135 aatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggagag 200  Q
    |||||||||||   | |||||||| ||||||||||||| ||||| |||||||||||||||||||||    
T  31836738 aatgaagaaattgtaagagaaaacctagagagagaaaactagggccggcttgttggagagggagag 31836673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 200
Target Start/End: Complemental strand, 9919282 - 9919233
Alignment:
Q  151 gagaaaacttagagagagaaaattagggtcggcttgttggagagggagag 200  Q
    |||||||  ||||||||||||||||||| |||||||||||||||| ||||    
T  9919282 gagaaaatctagagagagaaaattagggccggcttgttggagaggaagag 9919233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 144
Target Start/End: Original strand, 7312200 - 7312316
Alignment:
Q  28 aagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtgatttcaggtcaagaattgacctaaaacc 127  Q
    ||||||||||||||||||| |||||| ||| |||||||  |||||||||||        || |||||  || |||| ||||||| |||||||| |||||     
T  7312200 aagaaaaaacctagatctacgtgaaaatcatttatttaatttgaaatagagagaaaaagatgaagagaagtaattttaggtcaaaaattgacccaaaact 7312299  T
Q  128 atcccccaatgaagaaa 144  Q
    | ||| |||||||||||    
T  7312300 acccctcaatgaagaaa 7312316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 69
Target Start/End: Original strand, 9687318 - 9687356
Alignment:
Q  31 aaaaaacctagatctatgtgaaattcacttatttagatt 69  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  9687318 aaaaaacctatatctatgtgaaaatcacttatttagatt 9687356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 169
Target Start/End: Complemental strand, 11453845 - 11453773
Alignment:
Q  97 gtgatttcaggtcaagaattgacctaaaaccatcccccaatgaagaaa-tgagatgagaaaacttagagagaga 169  Q
    ||||||||| ||||| ||||||||  |||||||||| ||||||||||| ||| | |||||||| ||||||||||    
T  11453845 gtgatttcaagtcaaaaattgaccagaaaccatccctcaatgaagaaactga-aagagaaaacctagagagaga 11453773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 200
Target Start/End: Original strand, 41081875 - 41081982
Alignment:
Q  97 gtgatttcaggtcaagaattga-cctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggc---ttgttggag 192  Q
    ||||||||||||||| |||||| || ||||||| |||  || |||||||  |||||| |||||||||||||| |||| || || || |   |||||||||    
T  41081875 gtgatttcaggtcaaaaattgaccccaaaaccaccccataacgaagaaactagatgaaaaaacttagagagaaaaaactaaggccgacttattgttggag 41081974  T
Q  193 agggagag 200  Q
    ||||||||    
T  41081975 agggagag 41081982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 41081807 - 41081851
Alignment:
Q  30 gaaaaaacctagatctatgtgaaattcacttatttagattgaaat 74  Q
    ||||||||||||||||||| | || |||||||| |||||||||||    
T  41081807 gaaaaaacctagatctatgcgcaaatcacttatatagattgaaat 41081851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 112; Significance: 1e-56; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 19281021 - 19281226
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||||||||||||||||||||||  |||||||||||||||| | ||||||| ||||||||||||||||||||||||        || |||| ||||||    
T  19281021 accacacttagatgatgaaatcaca--aagaaaaaacctagatatgtgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagatgggtga 19281118  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggagag 200  Q
    |||| |||||| |||| ||| ||||||| ||||||||||||||| | ||||||||||| ||||||||||||||||||| || ||||||||||||||||||    
T  19281119 tttccggtcaaaaatttacccaaaaccaccccccaatgaagaaacgggatgagaaaacctagagagagaaaattagggccgacttgttggagagggagag 19281218  T
Q  201 gaagagta 208  Q
    ||||||||    
T  19281219 gaagagta 19281226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 7246962 - 7246776
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||||||| | | ||||||||||||||||||||||| ||||||||||||||||||||||||        || ||||||||||     
T  7246962 accacacttagatgatgaaatcacaaaga-aaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagaggggtgg 7246864  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgtt 188  Q
    |||||||| ||||||||||| ||||||| ||||||||||||||| | || |||||||| ||||||||||||||||||| |||||||||    
T  7246863 tttcaggttaagaattgacccaaaaccaccccccaatgaagaaacgggaagagaaaacctagagagagaaaattagggccggcttgtt 7246776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 7241786 - 7241600
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||| |||||||||||||||||| | | ||||||||||||||||||||||| ||||||||||||||||||||||||        || ||||||||||     
T  7241786 accacaattagatgatgaaatcacaaaga-aaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagaggggtgg 7241688  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgtt 188  Q
    |||||||| ||||||||||| ||||||| ||||||||||||||| | || |||||||| ||||||||||||||||||| |||||||||    
T  7241687 tttcaggttaagaattgacccaaaaccaccccccaatgaagaaacgggaagagaaaacctagagagagaaaattagggccggcttgtt 7241600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 27266935 - 27267125
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||||||| | | ||||||||||||||||||||||| ||||||||||||||||||||||||       ||| |||||||||||    
T  27266935 accacacttagatgatgaaatcacaaagaaaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaatatgaagaggggtga 27267034  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttgga 191  Q
    |||||||||||||||||||| ||||||| ||  |  |||||||| | || |||||||| ||||||||||||| ||||| || |||||||||    
T  27267035 tttcaggtcaagaattgacccaaaaccacccttcggtgaagaaacgggaagagaaaacctagagagagaaaactagggccgacttgttgga 27267125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 30371729 - 30371530
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||| ||| | | ||||||||||||||||||||||| ||||||||||||||||||||| ||        || |||||||||||    
T  30371729 accacacttagatgatgaaattacaaagaaaaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtga 30371630  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggagag 200  Q
    |||||||||||  ||||||| ||||||| ||| ||||||||||||   | |||||||| |||| |||||||| ||||| || ||||||||||||||||||    
T  30371629 tttcaggtcaaatattgacccaaaaccacccctcaatgaagaaattgtaagagaaaacctagatagagaaaactagggccgacttgttggagagggagag 30371530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 7150411 - 7150586
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||||||||||||||||| |||| | | ||||||| ||||||||||||||| ||||||||||||||||||||||||        || |||||||||||    
T  7150411 accacacttagatgatgaaagcacaaaga-aaaaaacttagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagaggggtga 7150509  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagg 177  Q
    ||||||||||| |||| | | |||||||||||| |||||||||| | || |||||||| ||||||||||||| ||||    
T  7150510 tttcaggtcaaaaattaatccaaaaccatccccgaatgaagaaacgggaagagaaaacctagagagagaaaactagg 7150586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 7887014 - 7887214
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||||| |  |||||||||| ||||| ||||||||| ||||||||||||||| ||||||||        |  ||||||| |||    
T  7887014 accacacttagatgatgaaatcaaa--aagaaaaaacatagatttatgtgaaaatcacttatttagattaaaatagagaggaaaagacgaagagggatga 7887111  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggagag 200  Q
    ||||||||||||||| |||| ||||||| ||| | |||||||||   || ||||||| ||||| |||||||| ||||| ||||||||||||||||||| |    
T  7887112 tttcaggtcaagaatggacccaaaaccacccctcgatgaagaaactggaagagaaaagttagaaagagaaaactagggccggcttgttggagagggaggg 7887211  T
Q  201 gaa 203  Q
    |||    
T  7887212 gaa 7887214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 18677541 - 18677718
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||||||| | | ||||||||||||||||||||||| ||||||||||||||| ||||||||        || ||||||| |||    
T  18677541 accacacttagatgatgaaatcacaaagaaaaaaaacctagatctatgtgaaaatcacttatttagattaaaatagagagaaaaagatgaagagggatga 18677640  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattaggg 178  Q
    |||||| |||| |||||||| ||||||| ||| ||||||||||| |  |  ||||||| ||||| |||||||||||||    
T  18677641 tttcagatcaataattgacccaaaaccacccctcaatgaagaaacggtaaaagaaaacctagagggagaaaattaggg 18677718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 8 - 203
Target Start/End: Complemental strand, 26578248 - 26578053
Alignment:
Q  8 ttagatgatgaaatcacaca-aagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtgatttcag 106  Q
    |||||||||||||| ||| | || ||||||||||||||||||||||| ||||||||||||||||||||| ||        || |||| | ||||||||||    
T  26578248 ttagatgatgaaattacaaagaaaaaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagatgagtgatttcag 26578149  T
Q  107 gtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggagaggaa 203  Q
    |||||||||||||| ||||||||||  |||| |||||||   | |||||||  | ||||||||||| ||||||| ||||||||||||||||| ||||    
T  26578148 gtcaagaattgaccaaaaaccatccatcaataaagaaattgtaagagaaaatctggagagagaaaactagggtc-gcttgttggagagggagtggaa 26578053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 34881721 - 34881516
Alignment:
Q  1 accacacttagatgatgaaatcacaca-------aagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaaga 93  Q
    ||||||||||||||||||||||||| |       ||||||||| |||||||||||||||| ||||||||||||||||||||||||        || ||||    
T  34881721 accacacttagatgatgaaatcacaaagaaaaaaaagaaaaaaactagatctatgtgaaaatcacttatttagattgaaatagagagaaaag-atgaaga 34881623  T
Q  94 ggggtgatttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggaga 193  Q
    | ||||||||||||||||||||||||| | ||||| ||| ||||| |||||    | |||||||| | ||||||||||| ||||| || |||||||||||    
T  34881622 gaggtgatttcaggtcaagaattgacccagaaccacccctcaatggagaaactgtaagagaaaacctggagagagaaaactagggccgacttgttggaga 34881523  T
Q  194 gggagag 200  Q
    |||||||    
T  34881522 gggagag 34881516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 36344567 - 36344757
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||||||||||||| ||||||||  |||||||||| |||||| |||||||| | ||||||||||||||||||| ||        || |||||||||||    
T  36344567 accacacttagatgat-aaatcaca--aagaaaaaacttagatccatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagaggggtga 36344663  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagag 194  Q
    ||| ||||||||||| |||  ||||||| ||| ||||||||||||  || |||||||  |||||||| |||||||||| || ||||||||||||    
T  36344664 ttttaggtcaagaatcgactcaaaaccacccctcaatgaagaaattggaagagaaaatctagagagaaaaaattagggccgacttgttggagag 36344757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 19259887 - 19260081
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtg-aaattcacttatttagattgaaatagagnnnnnnntataaaga---ggg 96  Q
    ||||||||||||||||||||||||| | | ||||||| |||||||||||| ||| ||||||||||||||||||||||||        | |||||   |||    
T  19259887 accacacttagatgatgaaatcacagagaaaaaaaacttagatctatgtgaaaaatcacttatttagattgaaatagagag------aaaaagaattggg 19259980  T
Q  97 gtgatttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagaggg 196  Q
    |||||||||||||||||||||||| ||||||| ||| ||| |||||||    | |||||||| |  |||||||||||||||| ||||||||||||| |||    
T  19259981 gtgatttcaggtcaagaattgacccaaaaccacccctcaacgaagaaaccgtaagagaaaacct--agagagaaaattagggccggcttgttggagtggg 19260078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 144
Target Start/End: Complemental strand, 16981289 - 16981152
Alignment:
Q  5 cacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtgatttc 104  Q
    |||||||||||||||||||||  |||||||||||||||| |||||| || ||||||||||||||||||||||||       ||| |||||| ||||||||    
T  16981289 cacttagatgatgaaatcaca--aagaaaaaacctagatatatgtgtaaatcacttatttagattgaaatagagagaaaaatatgaagaggagtgatttc 16981192  T
Q  105 aggtcaagaattgacctaaaaccatcccccaatgaagaaa 144  Q
    |||||||||||||| | || |||| ||| |||||||||||    
T  16981191 aggtcaagaattgatccaataccacccctcaatgaagaaa 16981152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 21060358 - 21060542
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||||||||||||||| |||||   ||||||||||||| |||||||||||| ||||||||||||||||||||| ||        || ||||| |||||    
T  21060358 accacacttagatgatgacatcacg--aagaaaaaacctacatctatgtgaaaatcacttatttagattgaaatatagagaaaaagatgaagagtggtga 21060455  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgt 187  Q
    |||||| ||||||||||||| ||||||| | | | ||||| ||   ||| |||||||| ||||||||||||| |||||||| |||||    
T  21060456 tttcagatcaagaattgacccaaaaccaccactcgatgaaaaatctagaagagaaaacctagagagagaaaactagggtcgccttgt 21060542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 43261895 - 43262094
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||||||||||||| ||||||||  ||| |||| ||||||||||||||||| ||||||||||||||||||||||||        || |||| ||||||    
T  43261895 accacacttagatgataaaatcaca--aaggaaaa-cctagatctatgtgaaaatcacttatttagattgaaatagagataaaaagatgaagatgggtga 43261991  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaa-tgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggaga 199  Q
    |||||||| ||||||||||  |||| || | | ||||||| ||| ||| | | |||||| ||||||||||||| ||||  ||||||||| ||||||||||    
T  43261992 tttcaggttaagaattgactcaaaatcacctctcaatgaaaaaattgata-gtgaaaacctagagagagaaaactaggaccggcttgttagagagggaga 43262090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 144
Target Start/End: Complemental strand, 28235586 - 28235447
Alignment:
Q  3 cacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtgatt 102  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||||||| |||||||||||||| ||||||||         || |||||||||||||    
T  28235586 cacacttagatgatgaaatcaca--aagaaaaaatctagatctatgtgaaaatcacttatttagatcgaaatagaaagaaaaagatgaagaggggtgatt 28235489  T
Q  103 tcaggtcaagaattgacctaaaaccatcccccaatgaagaaa 144  Q
    |||||||||  ||||||| ||||||| ||| |||| ||||||    
T  28235488 tcaggtcaatgattgacccaaaaccacccctcaataaagaaa 28235447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 10649428 - 10649317
Alignment:
Q  31 aaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtgatttcaggtcaagaattgacctaaaaccatc 130  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||        || ||||||||||||||||||||||||||||||| |||| || |    
T  10649428 aaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttcaggtcaagaattgacccaaaatcacc 10649329  T
Q  131 ccccaatgaaga 142  Q
    || |||||||||    
T  10649328 cctcaatgaaga 10649317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 781392 - 781267
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||| ||||||||||||||||||||  |||||||| ||||||||||| ||||| ||||||||||||||||||||| ||        || |||| ||||||    
T  781392 accatacttagatgatgaaatcaca--aagaaaaaccctagatctatctgaaaatcacttatttagattgaaatatagagaaaaagatgaagatgggtga 781295  T
Q  101 tttcaggtcaagaattgacctaaaacca 128  Q
    |||||||||||||||||| | |||||||    
T  781294 tttcaggtcaagaattgaaccaaaacca 781267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 27751929 - 27751857
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaata 75  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||| |||||||||    
T  27751929 accacacttagatgatgaaatcaca--aagaaaaaacctagatctatgtgaaaatcacttatttatattgaaata 27751857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 30298211 - 30298139
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaata 75  Q
    ||||||||||||||||||||||| |  |||||||||||||||||||||||||| |||||||||||||||||||||    
T  30298211 accacacttagatgatgaaatcata--aagaaaaaacctagatctatgtgaaaatcacttatttagattgaaata 30298139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 42579891 - 42579682
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaa------aacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaaga- 93  Q
    ||||||||||||||||||||||||| | | ||||      |||||| |||||||||||| |||||||||||||||||||||||         | || ||     
T  42579891 accacacttagatgatgaaatcacaaagaaaaaacaaaaaaacctaaatctatgtgaaaatcacttatttagattgaaatagaaagaaaaaaaaaatgaa 42579792  T
Q  94 --ggggtgatttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttgga 191  Q
      |||||||||||| ||||| |||||||| ||||||| ||| ||||| |||||    | |||||||| ||||||||||||| |||||  |||||||||||    
T  42579791 aaggggtgatttcatgtcaataattgacccaaaaccacccctcaatggagaaactgtaagagaaaacctagagagagaaaactagggcgggcttgttgga 42579692  T
Q  192 gagggagagg 201  Q
    ||||||||||    
T  42579691 gagggagagg 42579682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 2057914 - 2058027
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||||| | | | ||||||||||||||||||||||| ||||||||||||||||||||| ||        || |||||||||||    
T  2057914 accacacttagatgatgaaatcataaaga-aaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtga 2058012  T
Q  101 tttcaggtcaagaat 115  Q
    ||| |||||||||||    
T  2058013 ttttaggtcaagaat 2058027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 3271478 - 3271658
Alignment:
Q  1 accacacttagatgatgaaatcacaca-----aagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagagg 95  Q
    ||||||||||||||||||||||||| |     || ||||||  |||| |||||||||| ||||||||||||||||||| ||||        || ||||||    
T  3271478 accacacttagatgatgaaatcacaaagaaaaaacaaaaaaattagacctatgtgaaaatcacttatttagattgaaacagagagaaaag-atgaagagg 3271576  T
Q  96 ggtgatttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattaggg 178  Q
     ||||||||| ||||||||||||||||||| || ||| |||||||||||  | | || |||| ||||||||||||||||||||    
T  3271577 agtgatttcatgtcaagaattgacctaaaatca-ccctcaatgaagaaactataagaaaaaatttagagagagaaaattaggg 3271658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 35475413 - 35475548
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||| || ||||||||||||||  ||||||||| |||||||||||||||| ||||||||||||||||||||| ||        || ||||| |||||    
T  35475413 accacacgtaaatgatgaaatcaca--aagaaaaaatctagatctatgtgaaaatcacttatttagattgaaatatagataacaagatgaagagaggtga 35475510  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatg 138  Q
    |||||| ||||||||| ||| |||| || ||| |||||    
T  35475511 tttcagatcaagaattaacccaaaatcacccctcaatg 35475548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 41184516 - 41184712
Alignment:
Q  1 accacacttagatgatgaaatcacaca--------aagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaag 92  Q
    ||||||||||||||||||||||||| |        || ||||||||||||||||||||||| |    |||||||||||||||||||        || |||    
T  41184516 accacacttagatgatgaaatcacaaagaaaaaacaaaaaaaaacctagatctatgtgaaaat----tatttagattgaaatagagagaaaag-atgaag 41184610  T
Q  93 aggggtgatttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggag 192  Q
    |  |||||||||| ||||| |||||||| |||| |||||| ||||| |||||    | |||||||| |||||| |||||||||||| |||||||||||||    
T  41184611 aatggtgatttcatgtcaaaaattgacccaaaatcatccctcaatggagaaactgtaagagaaaacctagagaaagaaaattagggccggcttgttggag 41184710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 197
Target Start/End: Complemental strand, 27751824 - 27751723
Alignment:
Q  96 ggtgatttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagg 195  Q
    ||||||||||||||||||||||||| ||||||| ||| ||||| | || | ||| |||||||| || |||| ||||| ||||| ||||||| ||||||||    
T  27751824 ggtgatttcaggtcaagaattgacccaaaaccacccctcaatggaaaattaagaagagaaaacctatagagggaaaactagggccggcttgctggagagg 27751725  T
Q  196 ga 197  Q
    ||    
T  27751724 ga 27751723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 78
Target Start/End: Original strand, 20257799 - 20257846
Alignment:
Q  31 aaaaaacctagatctatgtgaaattcacttatttagattgaaatagag 78  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20257799 aaaaaacctagatctatgtgaaaatcacttatttagattgaaatagag 20257846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 42432882 - 42432828
Alignment:
Q  24 cacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagag 78  Q
    ||||||||||||||||| |||||| |||||||||||| |||||||||||||||||    
T  42432882 cacaaagaaaaaacctaaatctatatgaaattcacttttttagattgaaatagag 42432828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 43148734 - 43148658
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagag 78  Q
    ||||||||||||||||||||||||| | | |||||| ||| || ||||||||| |||||||||||||| |||||||||    
T  43148734 accacacttagatgatgaaatcacaaaga-aaaaaatctaaatatatgtgaaagtcacttatttagatcgaaatagag 43148658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 27576447 - 27576501
Alignment:
Q  24 cacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagag 78  Q
    ||||||||||||| |||||||||||||||  ||||||||||| ||||||||||||    
T  27576447 cacaaagaaaaaatctagatctatgtgaatatcacttatttacattgaaatagag 27576501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 4953999 - 4953910
Alignment:
Q  89 aaagaggggtgatttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatg---agatgagaaaacttagagagagaaaattag 176  Q
    |||||||||||||| || |||||||||||||| ||||||| ||||||||||| ||| |   |||  ||||||| |||||||||||||||||    
T  4953999 aaagaggggtgattccaagtcaagaattgacccaaaacca-cccccaatgaaaaaacggaaagagaagaaaacctagagagagaaaattag 4953910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 42886481 - 42886407
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagag 78  Q
    |||||||| |||||||||||||||   |||||||| |||| ||||||||||||  ||||||||| |||||||||||||    
T  42886481 accacactcagatgatgaaatcacg--aagaaaaa-cctaaatctatgtgaaaagcacttattttgattgaaatagag 42886407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 76
Target Start/End: Original strand, 1696979 - 1697016
Alignment:
Q  39 tagatctatgtgaaattcacttatttagattgaaatag 76  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  1696979 tagatctatgtgaaaatcacttatttagattgaaatag 1697016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 75
Target Start/End: Original strand, 35631792 - 35631839
Alignment:
Q  28 aagaaaaaacctagatctatgtgaaattcacttatttagattgaaata 75  Q
    |||||||||| ||||| ||||| ||| |||||||||||||||||||||    
T  35631792 aagaaaaaacttagatatatgtaaaaatcacttatttagattgaaata 35631839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 6445914 - 6445864
Alignment:
Q  28 aagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagag 78  Q
    |||||||||||||||||||||| ||| ||||||||||| ||| | ||||||    
T  6445914 aagaaaaaacctagatctatgtaaaaatcacttatttaaattaagatagag 6445864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 7613162 - 7613208
Alignment:
Q  32 aaaaacctagatctatgtgaaattcacttatttagattgaaatagag 78  Q
    |||||||||||||||| |||||  |||||||||||||||||| ||||    
T  7613162 aaaaacctagatctatatgaaaaacacttatttagattgaaacagag 7613208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 10148766 - 10148730
Alignment:
Q  38 ctagatctatgtgaaattcacttatttagattgaaat 74  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  10148766 ctagatctatgtgaaaatcacttatttagattaaaat 10148730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 107; Significance: 1e-53; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 9072726 - 9072523
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||||||| | | |||||| |||||| ||||||||| ||||||||||| ||||||||||||        || |||||||||||    
T  9072726 accacacttagatgatgaaatcacaaagaaaaaaaatctagatttatgtgaaagtcacttatttaaattgaaatagagagaaaaagatgaagaggggtga 9072627  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggagag 200  Q
    ||||| ||||| |||||||| ||||||| ||||||||||||||| ||||||||||||  ||||||||||||||||||||||| ||| |||| ||||||||    
T  9072626 tttcaagtcaaaaattgacccaaaaccaccccccaatgaagaaacgagatgagaaaatctagagagagaaaattagggtcggtttgctggaaagggagag 9072527  T
Q  201 gaag 204  Q
    ||||    
T  9072526 gaag 9072523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 33896090 - 33895907
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||||||| | | ||||||||||||||||||||||| ||||||||||||||| ||||||||        || |||||||||||    
T  33896090 accacacttagatgatgaaatcacaaagaaaaaaaacctagatctatgtgaaagtcacttatttagatttaaatagagagaaaaagatgaagaggggtga 33895991  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggctt 185  Q
     || || ||||||||||||| ||||||| ||||||||||||||| | || |||||||| ||||||||||||||||||| ||||||    
T  33895990 ctttagatcaagaattgacccaaaacca-cccccaatgaagaaacgcgaagagaaaacctagagagagaaaattagggccggctt 33895907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 11196897 - 11196704
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||||| |  |||||||||||||||||||||||||| ||||||||||||||||||||||||        || |||| || |||    
T  11196897 accacacttagatgatgaaatcaaa--aagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagaaaaag--atgaagatggatga 11196802  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggag 198  Q
    |||||||||||||||||||| ||||||| ||| ||| |||||||  ||| |||||||  ||||||||||||| ||||| | |||||||||||||||||    
T  11196801 tttcaggtcaagaattgacccaaaaccacccctcaacgaagaaactagaagagaaaaactagagagagaaaactagggccagcttgttggagagggag 11196704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 9619433 - 9619632
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||| ||||||||||||| |||   | |||||| ||| |||||||||||| ||||||||||||||||||||| ||        || |||||||||||    
T  9619433 accacacgtagatgatgaaattacaatgaaaaaaaatctaaatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtga 9619532  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggagag 200  Q
    |||||||||||||||||||| ||||||| ||| ||||||||||||   | |||||||  ||||||||||||| ||| | |||||||||||||||||||||    
T  9619533 tttcaggtcaagaattgacccaaaaccacccctcaatgaagaaattgtaagagaaaatctagagagagaaaactagagccggcttgttggagagggagag 9619632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 14906999 - 14907198
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||| || ||||||||||| ||| | | ||| ||||||||||||||||||| ||||||||||||||||||||| ||        || |||| ||||||    
T  14906999 accacattttgatgatgaaattacaaagaaaaagaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagatgggtga 14907098  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggagag 200  Q
    |||||||||||||||||| | |||| |||||| ||||||||||||   | |||||||| ||||||||||||| |||||||||||| || |||||||||||    
T  14907099 tttcaggtcaagaattgatccaaaatcatccctcaatgaagaaattgtaagagaaaacctagagagagaaaactagggtcggcttattagagagggagag 14907198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 11725689 - 11725507
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||||| |  ||||||||||||||||||||||||||  |||||||||||||||||||| ||        |  |||||||||||    
T  11725689 accacacttagatgatgaaatcaaa--aagaaaaaacctagatctatgtgaaaaacacttatttagattgaaataaagagaaaaagacgaagaggggtga 11725592  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaa-tgagatgagaaaacttagagagagaaaattagggtcggctt 185  Q
    |||||||||||||||||||| ||||||| ||| ||||||||||| ||| | |||||||  ||||||||||||| ||||| ||||||    
T  11725591 tttcaggtcaagaattgacccaaaaccacccctcaatgaagaaactga-aagagaaaatctagagagagaaaactagggccggctt 11725507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 44100010 - 44100200
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||||||||||||| ||||||||  |||||||||| ||||||||||||||| | ||||||||||||||||||| ||        || |||||||||||    
T  44100010 accacacttagatgat-aaatcaca--aagaaaaaacttagatctatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagaggggtga 44100106  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagag 194  Q
    ||| ||||||||||| |||| ||||||| ||| |||||||||||    | |||||||| ||||||||||||| ||||| |||||||||||||||    
T  44100107 ttttaggtcaagaatcgacccaaaaccacccctcaatgaagaaaccgaaagagaaaacctagagagagaaaactagggccggcttgttggagag 44100200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 11464179 - 11463988
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||| ||| | | |||||| |||||||||||||||| ||||||||| | ||||||||| ||        || |||||||||||    
T  11464179 accacacttagatgatgaaattacaaagaaaaaaaatctagatctatgtgaaaatcacttattcaaattgaaataaagagaaga--atgaagaggggtga 11464082  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagag 194  Q
    |||||||||||||||||||||||||||| |||  |||||||||||   | ||||||||| | |||||||||||||||||| | || ||||||||    
T  11464081 tttcaggtcaagaattgacctaaaaccaccccttaatgaagaaattgtaagagaaaactcaaagagagaaaattagggtcagtttattggagag 11463988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 9498675 - 9498863
Alignment:
Q  1 accacacttagatgatgaaatcacaca--aagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggt 98  Q
    ||||||||||||||||||||| ||| |  || |||||||||| |||||||||||| ||||||||||||||||||||| ||        || |||||||||    
T  9498675 accacacttagatgatgaaattacaaagaaaaaaaaaacctaaatctatgtgaaaatcacttatttagattgaaataaagataaaaagatgaagaggggt 9498774  T
Q  99 gatttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgtt 188  Q
    |||||||||| ||||||||||| ||||||| ||| ||||||||||||   | |||||||| ||||||||||||| ||||| || ||||||    
T  9498775 gatttcaggt-aagaattgacccaaaaccacccctcaatgaagaaattgtaagagaaaacctagagagagaaaactagggccgacttgtt 9498863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 29777227 - 29777031
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||||||| | | |||||||||||||||          | |||||||||||||||||||||        || |||||| ||||    
T  29777227 accacacttagatgatgaaatcacaaaga-aaaaaacctagatct----------cgcttatttagattgaaatagagagaaaaagatgaagaggagtga 29777139  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggagag 200  Q
    ||||| ||||| |||||||| |||||||  | ||||||||||||   ||||||||||| ||||||||||||||||||| || |||||||||||||||| |    
T  29777138 tttcatgtcaataattgacccaaaaccactcaccaatgaagaaacaggatgagaaaacctagagagagaaaattagggccgacttgttggagagggaggg 29777039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 4808972 - 4808803
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||| ||| | | |||||| |||||||||||||||| ||||||||||| ||||||||| ||        || ||||||||| |    
T  4808972 accacacttagatgatgaaattacaaaga-aaaaaagctagatctatgtgaaaatcacttatttacattgaaataaagaaaaaaagatgaagaggggtaa 4808874  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaa 171  Q
    |||||||||||||||||||| ||||||| ||| ||||||||||||   | |||||||||  ||||||||||    
T  4808873 tttcaggtcaagaattgacccaaaaccacccctcaatgaagaaattgtaagagaaaactcggagagagaaa 4808803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 139
Target Start/End: Original strand, 42448104 - 42448241
Alignment:
Q  2 ccacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtgat 101  Q
    |||||||||||||||||||||||| | | | ||||||||||||||| || || ||||||||||||||||||||||||        || ||||||||||||    
T  42448104 ccacacttagatgatgaaatcacaaagaaacaaaacctagatctatatgtaaatcacttatttagattgaaatagagagaaaaagatgaagaggggtgat 42448203  T
Q  102 ttcaggtcaagaattgacctaaaaccatcccccaatga 139  Q
    ||||||||||||||| ||| ||||||| ||| ||||||    
T  42448204 ttcaggtcaagaattaacccaaaaccacccctcaatga 42448241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 2655878 - 2655734
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||| ||| | | |||||| |||||||||||||||| ||||||||||||||||||||| ||        || |||| ||||||    
T  2655878 accacacttagatgatgaaattacaaagaaaaaaaatctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagatgggtga 2655779  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaat 145  Q
    || ||||||||||||||||| ||||||| | | ||||||||||||    
T  2655778 ttgcaggtcaagaattgacccaaaaccaccgctcaatgaagaaat 2655734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 204
Target Start/End: Complemental strand, 19876216 - 19876023
Alignment:
Q  4 acacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtgattt 103  Q
    ||||||||||||||||||||||  |||||||||||| ||||||||||||| |||||||||||||||||||||  |        || |||| | || ||||    
T  19876216 acacttagatgatgaaatcaca--aagaaaaaaccttgatctatgtgaaaatcacttatttagattgaaatattgagaaaaagatgaagatgagtaattt 19876119  T
Q  104 caggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggagaggaa 203  Q
    ||||||||||||||||| ||||||| ||| ||||  |||||    | |||||||| |  |||||||||||||||| ||||||||||||||||||| ||||    
T  19876118 caggtcaagaattgacccaaaaccacccctcaat--agaaa-atcaagagaaaacct--agagagaaaattagggccggcttgttggagagggaggggaa 19876024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 34611812 - 34611670
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||||||| | | ||||||||||||| ||||||||| ||||||||||||| |||||||||        ||| |||| | ||||    
T  34611812 accacacttagatgatgaaatcacaaaga-aaaaaacctagatttatgtgaaaatcacttatttagactgaaatagaaagaaaaatatgaagatgagtga 34611714  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaa 144  Q
    |||||||||||||||||||| ||||||| ||| | |||||||||    
T  34611713 tttcaggtcaagaattgacccaaaaccacccctcgatgaagaaa 34611670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 43890200 - 43890390
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||| |||||||||||||||| ||| | | |||||| |||||||||||| ||| |||||||||||||||||| || ||        || |||||||||||    
T  43890200 accatacttagatgatgaaattacaaagaaaaaaaatctagatctatgtcaaaatcacttatttagattgaattaaagagaaaaagatgaagaggggtga 43890299  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttgga 191  Q
    ||||||||||| || ||| | ||||||| ||| ||||||||||||   | |||||||| ||||||||||||| ||||| || ||| |||||    
T  43890300 tttcaggtcaaaaaatgatccaaaaccacccctcaatgaagaaattgtaagagaaaacctagagagagaaaactagggccgacttattgga 43890390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 44578044 - 44577848
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||| ||| | | |||||||||||||||||||| || ||||||| ||||||||||||||||        || |||||| ||||    
T  44578044 accacacttagatgatgaaattacaaaga-aaaaaacctagatctatgtgtaaatcacttagttagattgaaatagagagaaaaagatgaagaggagtga 44577946  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggagag 200  Q
    ||| ||||||| |||||||| ||||||| ||| |||||||||||    | |||||||| |  |||||||||| ||||| ||  |||||||||||| ||||    
T  44577945 ttttaggtcaaaaattgacccaaaaccacccctcaatgaagaaacagtaagagaaaacct--agagagaaaactagggccgtattgttggagaggaagag 44577848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 35580465 - 35580289
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||| ||||||||||| ||||||||||||        || |||| | ||||    
T  35580465 accacacttagatgatgaaatcacg--aagaaaaaacctagatctatgtgaaaatcacttatttaaattgaaatagagagaaaaagatgaagatgagtga 35580368  T
Q  101 tttcaggtcaagaattgacctaaaaccatcc-cccaatgaagaaatgagatgagaaaacttagagagagaaaattaggg 178  Q
    ||| | ||||| |||||||| ||||||| || | ||||||||||||  || || ||||| || ||||| ||||||||||    
T  35580367 ttttatgtcaaaaattgacccaaaaccaccctctcaatgaagaaattggaagaaaaaacctaaagagaaaaaattaggg 35580289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 17949253 - 17949073
Alignment:
Q  3 cacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtgatt 102  Q
    ||||||||||||||||||||||| | | |||||| | |||||||||||||| || |||||||||||||||||||||         | |||||||||||||    
T  17949253 cacacttagatgatgaaatcacaaata-aaaaaatcaagatctatgtgaaaatcgcttatttagattgaaatagagagaaaaaggtgaagaggggtgatt 17949155  T
Q  103 tcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggct 184  Q
    ||||||||| |||||||| |||| || ||  |||||||||||    | |||| ||| ||||||||||||| || ||||||||    
T  17949154 tcaggtcaataattgacccaaaatcacccatcaatgaagaaactgtaagagacaacctagagagagaaaactatggtcggct 17949073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 28 - 199
Target Start/End: Complemental strand, 33342420 - 33342250
Alignment:
Q  28 aagaaaaaacctagatctatgtgaaat-tcacttatttagattgaaatagagnnnnnnntataaagaggggtgatttcaggtcaagaattgacctaaaac 126  Q
    ||||||||||||||||||||||||||  |||||||||||||||||| |||||        || ||||||||||||||||||| || |||||||| |||||    
T  33342420 aagaaaaaacctagatctatgtgaaaaatcacttatttagattgaattagagaaaaaaggatgaagaggggtgatttcaggttaaaaattgacccaaaac 33342321  T
Q  127 catcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggaga 199  Q
    || ||| |||||||||||   || || ||||| |  |||||||||| ||||| ||||||||| ||||| ||||    
T  33342320 cacccctcaatgaagaaactcgaagaaaaaacct--agagagaaaactagggccggcttgttagagagagaga 33342250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 31 - 201
Target Start/End: Original strand, 32724594 - 32724765
Alignment:
Q  31 aaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtgatttcaggtcaagaa-ttgacctaaaaccat 129  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||        || |||||  ||||||||||||||| || |||||| |||||||     
T  32724594 aaaaaatctagatctatgtgaaaatcacttatttagattgaaatagagagaaaag-atgaagagaagtgatttcaggtcaataatttgacccaaaaccac 32724692  T
Q  130 cccc-caatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggagagg 201  Q
    |||| ||||| |||||    | ||||||||  |||||||||||| |||||||| ||||||||||||| |||||    
T  32724693 cccctcaatggagaaactgtaagagaaaacccagagagagaaaactagggtcgacttgttggagaggtagagg 32724765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 43192422 - 43192497
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagag 78  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||| |||  |||||||||||||||||||||||    
T  43192422 accacacttagatgatgaaatcacg--aagaaaaaacctagatctatgtaaaaaccacttatttagattgaaatagag 43192497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 179
Target Start/End: Complemental strand, 28239811 - 28239664
Alignment:
Q  33 aaaacctagatctatgtgaaatt-cacttatttagattgaaatagagnnnnnnntataaagaggggtgatttcaggtcaagaattgacctaaaaccatcc 131  Q
    |||||||||||||||||||||   |||||||||||||||||||||||        || ||||| |||||||||||||||| |||||||| |||| || ||    
T  28239811 aaaacctagatctatgtgaaaaaacacttatttagattgaaatagagagaaaaagatgaagagaggtgatttcaggtcaaaaattgacccaaaatcaccc 28239712  T
Q  132 cc-caatgaagaaatgagatgagaaaacttagagagagaaaattagggt 179  Q
    || |||||||||||   || |||||||| |||||||| |||||||||||    
T  28239711 cctcaatgaagaaaatggaagagaaaacctagagaga-aaaattagggt 28239664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 37565955 - 37566031
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagag 78  Q
    |||||||||||||||||||||| || | | |||||||||| |||||||||||| ||| ||||||||||||||||||||    
T  37565955 accacacttagatgatgaaatctcaaaga-aaaaaacctaaatctatgtgaaaatcaattatttagattgaaatagag 37566031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 15597268 - 15597314
Alignment:
Q  28 aagaaaaaacctagatctatgtgaaattcacttatttagattgaaat 74  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||    
T  15597268 aagaaaaaacctagatctatgtgaaaatcacttatttagattgaaat 15597314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 33298842 - 33298788
Alignment:
Q  24 cacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagag 78  Q
    |||||||  ||||||||||||||||||||| |||||||||||||||||| |||||    
T  33298842 cacaaaggtaaaacctagatctatgtgaaaatcacttatttagattgaattagag 33298788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 17430970 - 17431020
Alignment:
Q  28 aagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagag 78  Q
    |||||||||||||||||||| |||||  |||||||||||||||| ||||||    
T  17430970 aagaaaaaacctagatctatctgaaaagcacttatttagattgacatagag 17431020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 12184263 - 12184217
Alignment:
Q  32 aaaaacctagatctatgtgaaattcacttatttagattgaaatagag 78  Q
    ||||| ||||| ||||||||||  |||||||||||||||||||||||    
T  12184263 aaaaaactagagctatgtgaaaaacacttatttagattgaaatagag 12184217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 12428691 - 12428645
Alignment:
Q  32 aaaaacctagatctatgtgaaattcacttatttagattgaaatagag 78  Q
    ||||| ||||| ||||||||||  |||||||||||||||||||||||    
T  12428691 aaaaaactagagctatgtgaaaaacacttatttagattgaaatagag 12428645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 17427320 - 17427370
Alignment:
Q  28 aagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagag 78  Q
    |||||||||||||||||||| |||||  |||||||||| | ||||||||||    
T  17427320 aagaaaaaacctagatctatttgaaaagcacttatttacactgaaatagag 17427370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 39153218 - 39153293
Alignment:
Q  1 accacacttagatgatgaaatcac--acaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaat 74  Q
    ||||||||  ||||| ||||||||  | ||| |||| ||||| |||||||||||| ||||||||||| ||||||||    
T  39153218 accacactcggatgacgaaatcacgaagaaaaaaaatacctaaatctatgtgaaaatcacttatttaaattgaaat 39153293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 107; Significance: 1e-53; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 45128209 - 45128012
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||||||| | | ||||||||||||||||||||||| ||||||||||||||||||||| ||        || |||||||||||    
T  45128209 accacacttagatgatgaaatcacaaaga-aaaaaacctagatctatgtgaaagtcacttatttagattgaaataaagagaaaaagatgaagaggggtga 45128111  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggagag 200  Q
    |||||||||||||||||||| ||||||| ||| ||||||||||||| || |||||||| ||||||||||||||||||  |||||| ||||||||||||||    
T  45128110 tttcaggtcaagaattgacccaaaacca-ccctcaatgaagaaatgggaagagaaaacctagagagagaaaattaggaccggcttattggagagggagag 45128012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 6173637 - 6173445
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||| ||||||||||||||| | | ||||||||||||||||||||||| ||||||||||||||||||||||||        || |||||||||||    
T  6173637 accacacttcgatgatgaaatcacaaaga-aaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagaggggtga 6173539  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagag 194  Q
    ||||||||||||||| |||| ||||||| ||| |||||||||||    |  ||||||| ||||||||||||| |||||||||||||||||||||    
T  6173538 tttcaggtcaagaatagaccgaaaaccacccctcaatgaagaaaccgtaaaagaaaacctagagagagaaaactagggtcggcttgttggagag 6173445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 30420683 - 30420485
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||| ||| | | ||||||||||||||||||||||| ||||||||||||||||||||| ||        || |||||||||||    
T  30420683 accacacttagatgatgaaattacaaagaaaaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtga 30420584  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggaga 199  Q
    ||||||||||| |||||| | ||||||| ||| ||||||||||||   |  | ||||| ||||||||||| | ||||| ||||||||||||||||||||    
T  30420583 tttcaggtcaaaaattgatccaaaaccacccctcaatgaagaaattgtaaaaaaaaacctagagagagaagactagggccggcttgttggagagggaga 30420485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 32680657 - 32680826
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||||||| | | ||||||||||||||||||||||| ||||||||||||||||||||||||        || |||| | ||||    
T  32680657 accacacttagatgatgaaatcacaaagaaaaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagatgagtga 32680756  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaa 171  Q
    ||||||||||||||| |||| ||||||| ||||||||||||||| | || |||||||| ||||||||||||    
T  32680757 tttcaggtcaagaatcgaccgaaaacca-cccccaatgaagaaacgggaagagaaaacctagagagagaaa 32680826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 21570483 - 21570676
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||||||| ||| |||||| |||||||||||||||| ||||||||||||||||||||| ||        || |||||||||||    
T  21570483 accacacttagatgatgaaatcacaaaaaaaaaaaatctagatctatgtgaaaatcacttatttagattgaaatatagagaaaaagatgaagaggggtga 21570582  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagag 194  Q
    |||||||||||||||||||| ||||||| | | ||||||| ||    || |||||||| |||||| |||||| ||||| || ||||||||||||    
T  21570583 tttcaggtcaagaattgacccaaaaccaccactcaatgaaaaatctggaagagaaaacctagagacagaaaactagggccgccttgttggagag 21570676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 2808548 - 2808743
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||||||||||||||||||||||  ||||||| |||||||||||||||||| ||||||||||||| ||||||||||        || |||||||||||    
T  2808548 accacacttagatgatgaaatcaca--aagaaaa-acctagatctatgtgaaaatcacttatttagactgaaatagagagaaatagatgaagaggggtga 2808644  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaag-aaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggaga 199  Q
    |||||||||||||||||||| ||||||| ||| |||||||| |||||| | || ||||| |||| | |||||||||||| || |||| ||||||||||||    
T  2808645 tttcaggtcaagaattgacccaaaaccacccctcaatgaagaaaatga-aagaaaaaacctagaaaaagaaaattagggccgacttgatggagagggaga 2808743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 34598992 - 34598795
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaaga-ggggtg 99  Q
    ||||||||||||||||||||||||| ||| |||||  |||||||||||||||| ||||||||||||||||||||||||        || |||| | | ||    
T  34598992 accacacttagatgatgaaatcacaaaaaaaaaaa--ctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagatgagttg 34598895  T
Q  100 atttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggaga 199  Q
    |||| |||||||||||||| | ||||||| ||| ||| ||||||| |  | |||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  34598894 atttgaggtcaagaattgatccaaaaccacccctcaacgaagaaacggtaagagaaaacctagagagagaaaattagggccggcttgttggagagggaga 34598795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 36234013 - 36233814
Alignment:
Q  1 accacacttagatgatgaaatcacaca--aagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggt 98  Q
    ||||||||||||||||||||| ||| |  || |||||| |||||||||||||||| ||||||||||||||||||||| ||        || |||||||||    
T  36234013 accacacttagatgatgaaattacaaagaaaaaaaaaatctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggt 36233914  T
Q  99 gatttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggag 198  Q
    |||||||||||| ||||||||| ||||||| ||| ||||||||||||   | |||||||  ||||||||||||| ||||| || ||||||||||||||||    
T  36233913 gatttcaggtcatgaattgacccaaaaccacccctcaatgaagaaattgcaagagaaaatctagagagagaaaactagggccgacttgttggagagggag 36233814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 9986418 - 9986612
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaa--aacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnnta--taaagaggg 96  Q
    ||||||||||||||||||||||||| | | ||||  ||||||||||||||||||| |||||||||||||||||| |||||        |  | |||||||    
T  9986418 accacacttagatgatgaaatcacaaagaaaaaataaacctagatctatgtgaaaatcacttatttagattgaattagagataaaaaaaattgaagaggg 9986517  T
Q  97 gtgatttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttgga 191  Q
     ||||||||||||||||||||||| ||||||| ||| |||||||||||    | |||||||| ||||||||||||| |||||||||||| |||||    
T  9986518 atgatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaactgtaagagaaaacctagagagagaaaactagggtcggcttattgga 9986612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 3270305 - 3270501
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||||||| |||  |||||||||||||||||||||| ||||||||||||||||||||| |         || || | | ||||    
T  3270305 accacacttagatgatgaaatcacaaaaa--aaaaacctagatctatgtgaaaatcacttatttagattgaaataaaaagaaaaagatgaaaatgagtga 3270402  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggaga 199  Q
    |||||||||||||||||||| ||||||| ||| ||||||||||||   | ||||||||||||||||| |||| || ||    |||||||||||||||||    
T  3270403 tttcaggtcaagaattgacccaaaaccacccctcaatgaagaaatcgtaagagaaaacttagagagaaaaaactaaggctcacttgttggagagggaga 3270501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 41712841 - 41713038
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||| ||||||||| | | |||||||||| |||||||||||| ||||||||||||||| ||||||||        || || | ||||||    
T  41712841 accacacttagatgaggaaatcacagaga-aaaaaacctaaatctatgtgaaaatcacttatttagattaaaatagagagaaaatgatgaaaatgggtga 41712939  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggaga 199  Q
    ||||| |||||||||| ||| ||||||| ||| ||||||||||||   | |||||||| |||| |||||||| |||||||||||| |||||||| ||||    
T  41712940 tttcacgtcaagaattaacccaaaaccacccctcaatgaagaaattgtaagagaaaacctagatagagaaaactagggtcggcttattggagagtgaga 41713038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 7015787 - 7015929
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||||||||||||||||||||||  | ||||||||||| |||||||||||| ||| ||||||||||||||||| ||        || | |||||||||    
T  7015787 accacacttagatgatgaaatcaca--aggaaaaaacctaaatctatgtgaaaatcaattatttagattgaaataaagagaaaaagattaggaggggtga 7015884  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaat 145  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||    
T  7015885 tttcaggtcaagaattgacccaaaaccaacccccaatgaagaaat 7015929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 27249227 - 27249421
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||||||||||  |||||| ||| | | ||||||||||||||||||||||| ||||||||||||||||||||| ||        || |||||||||||    
T  27249227 accacacttagatcttgaaattacaaaga-aaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtga 27249325  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagaggg 196  Q
    |||||||||||| ||||||| ||||||| ||  ||||||||||||   | |||||||| ||||||||||||| ||    |||||||||||||||||    
T  27249326 tttcaggtcaagtattgacccaaaaccacccttcaatgaagaaattgtaagagaaaacctagagagagaaaactaaaaccggcttgttggagaggg 27249421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 8971703 - 8971893
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaat--agagnnnnnnntataaagaggggt 98  Q
    |||| ||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||| ||||  ||||        || ||||||| |    
T  8971703 accatacttagatgatgaaatcaca--aagaaaaaacctagatctatgtgaaaatcacttatttagattaaaataaagagagaaaaagatgaagagggat 8971800  T
Q  99 gatttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttgga 191  Q
    |||||||||||||||||||||| ||||||| ||| |||||||||||    | || ||||| || ||||||||||||| |||| |||| |||||    
T  8971801 gatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaactgtaagaaaaaacctaaagagagaaaattaaggtcagcttattgga 8971893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 40626104 - 40626279
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||||||||||||||||||||||  |||||||||| ||||||||||||||| || |||||||||||||||||||||        |  |||||||||||    
T  40626104 accacacttagatgatgaaatcaca--aagaaaaaacgtagatctatgtgaaaatcccttatttagattgaaatagagagaaaaagacgaagaggggtga 40626201  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattaggg 178  Q
    ||||||||||||||| |||| |||| || ||| |||| ||||||   || |||||||| || |||||||||| |||||    
T  40626202 tttcaggtcaagaatagacccaaaatcacccctcaattaagaaaatggaagagaaaacctaaagagagaaaactaggg 40626279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 20047158 - 20047348
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||||||||||||||||||||||   | |||||||||| |||||||| ||| ||||||||||||||||||| ||||        || || |||| |||    
T  20047158 accacacttagatgatgaaatcacaatga-aaaaaacctaaatctatgtaaaagtcacttatttagattgaaaaagagagaaaaagatgaataggg-tga 20047255  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggaga 193  Q
    |||||||||||||||||| | ||||| | ||||||||||||||| |  | |||||||| |||||||||||||||| || || |||||||||||    
T  20047256 tttcaggtcaagaattgatccaaaactaccccccaatgaagaaacggtaagagaaaacctagagagagaaaattatggccgtcttgttggaga 20047348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 32913246 - 32913121
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||| ||||||||| ||        || |||||||||||    
T  32913246 accacacttagatgatgaaatcaca--aagaaaaaacctagatctatgtgaaaatcacttatttaaattgaaatatagagaaaaggatcaagaggggtga 32913149  T
Q  101 tttcaggtcaagaattgacctaaaacca 128  Q
    |||||||||||||||||| | |||||||    
T  32913148 tttcaggtcaagaattgatccaaaacca 32913121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 40660008 - 40660146
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||||||||||||||||||||||  ||||||||| |||||||||||||||| ||||||||||||||||||||||||        || |||| | ||||    
T  40660008 accacacttagatgatgaaatcaca--aagaaaaaatctagatctatgtgaaaatcacttatttagattgaaatagagaaaaag--atgaagatgtgtga 40660103  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaa 144  Q
    |||||||||||||||||||  ||||||| ||| |||||||||||    
T  40660104 tttcaggtcaagaattgactcaaaacca-ccctcaatgaagaaa 40660146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 22421740 - 22421665
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagag 78  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22421740 accacacttagatgatgaaatcaca--aagaaaaaacctagatctatgtgaaagtcacttatttagattgaaatagag 22421665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 204
Target Start/End: Complemental strand, 27477150 - 27476958
Alignment:
Q  10 agatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtgatttcaggtc 109  Q
    ||||||||||||||||  ||||||||| |||||||||||||||| | ||||||||||||||||||| ||        || |||||||||||||||| |||    
T  27477150 agatgatgaaatcaca--aagaaaaaatctagatctatgtgaaaattacttatttagattgaaatatagagaaaaagatgaagaggggtgatttcatgtc 27477053  T
Q  110 aagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggagaggaag 204  Q
    || |||||||| ||||||||||| ||||  | ||   ||| || ||||| |||||| |||||| ||||| |  ||| ||||||||||||||||||    
T  27477052 aataattgacccaaaaccatccctcaatagaaaatcaagaagaaaaaacctagagacagaaaactagggccaacttattggagagggagaggaag 27476958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 3725185 - 3725007
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||||||||| ||||||||||||  ||||||||| | |||||||||||||| ||||||||||| ||||||||||||        || ||||||  |||    
T  3725185 accacacttagacgatgaaatcaca--aagaaaaaatcaagatctatgtgaaaatcacttatttatattgaaatagagagaaaaagatgaagaggaatga 3725088  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcg 181  Q
    ||| ||||||| |||||||| ||||||| ||| |||| |||||||   | ||||||||||| | ||||||||||| |||||    
T  3725087 ttttaggtcaaaaattgacccaaaaccacccctcaataaagaaattgtaagagaaaacttaaaaagagaaaattatggtcg 3725007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 4228136 - 4228008
Alignment:
Q  3 cacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtgatt 102  Q
    ||||||||||||||||||||||| | | ||||||| |||||||||||| || ||||||||||| ||||||||| ||       ||| |||| | ||||||    
T  4228136 cacacttagatgatgaaatcacaaagaaaaaaaacatagatctatgtgtaaatcacttatttatattgaaataaagataaaaatatgaagatgtgtgatt 4228037  T
Q  103 tcaggtcaagaattgacctaaaaccatcc 131  Q
    |||||||||||||||||| ||||||||||    
T  4228036 tcaggtcaagaattgacccaaaaccatcc 4228008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 26025486 - 26025691
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaaga-ggggtg 99  Q
    |||||||||| ||||||||||||||  ||||||||||||||||||||||||||  |||||||||||||||||||||||        || |||| ||||||    
T  26025486 accacacttacatgatgaaatcaca--aagaaaaaacctagatctatgtgaaaaccacttatttagattgaaatagagagaaaaagatgaagatggggtg 26025583  T
Q  100 atttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagag----agaaaattagggtcggcttgttggagagg 195  Q
    ||||||| |||| || |    | |||| ||||| | |||||||||  ||| |||||||| |||||||    | |||| ||||| ||||||||||||||||    
T  26025584 atttcagatcaaaaaat----tgaaactatccctcgatgaagaaactagaagagaaaacctagagagaaaaaaaaaactagggccggcttgttggagagg 26025679  T
Q  196 gagaggaagagt 207  Q
    ||| ||||||||    
T  26025680 gaggggaagagt 26025691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 4192843 - 4192661
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||||||||||||||||||||||  ||||||||||||| || ||||||||| ||||||||||||||||||||| ||        || |||||||||||    
T  4192843 accacacttagatgatgaaatcaca--aagaaaaaacctaaatatatgtgaaaatcacttatttagattgaaatatagagaaaaagatgaagaggggtga 4192746  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggctt 185  Q
    | ||||||||| |||||| | |||||||  || | ||| | ||   ||| | |||||| ||||||||||||| || |||||||||    
T  4192745 tctcaggtcaaaaattgatccaaaaccacacctcgatggaaaatctagaagggaaaacctagagagagaaaactacggtcggctt 4192661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 25087042 - 25086839
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcact----tatttagattgaaatagagnnnnnnntataaagaggg 96  Q
    ||||||||||||||||||||||| |  || ||||||||||||||||||||||| |||||    ||| |||||| |||||||         || |||||||    
T  25087042 accacacttagatgatgaaatcaaa--aataaaaaacctagatctatgtgaaaatcactcacttatatagattcaaatagatggaaaaagatgaagaggg 25086945  T
Q  97 gtgatttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagaggg 196  Q
    ||||||||||||||| |||||||| ||||||| |||  ||||||||||   || |||||||| |  |||||||||| ||| | |||||| || |||||||    
T  25086944 gtgatttcaggtcaataattgacccaaaaccacccctaaatgaagaaaccggaagagaaaacct--agagagaaaactagagccggcttattcgagaggg 25086847  T
Q  197 agaggaag 204  Q
    ||||||||    
T  25086846 agaggaag 25086839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 3269187 - 3269251
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttattta 65  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||    
T  3269187 accacacttagatgatgaaatcacaaaaaaaaaaaacctagatctatgtgaaaatcacttattta 3269251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 3269746 - 3269810
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttattta 65  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||    
T  3269746 accacacttagatgatgaaatcacaaaaaaaaaaaacctagatctatgtgaaaatcacttattta 3269810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 31 - 144
Target Start/End: Original strand, 459379 - 459492
Alignment:
Q  31 aaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtgatttcaggtcaagaattgacctaaaaccatc 130  Q
    |||||||||| |||||||||||| || |||||||| | ||||||||||        || |||||||||||||||||||||| |||||||| ||||||| |    
T  459379 aaaaaacctatatctatgtgaaaatcgcttatttaaaatgaaatagagagaaaaggatgaagaggggtgatttcaggtcaaaaattgacccaaaaccacc 459478  T
Q  131 ccccaatgaagaaa 144  Q
    || |||||||||||    
T  459479 cctcaatgaagaaa 459492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 8805871 - 8805799
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaata 75  Q
    |||||||| ||||||||||||||||  ||||||||||||||||| |||||||| ||||||||||| |||||||||    
T  8805871 accacactcagatgatgaaatcaca--aagaaaaaacctagatccatgtgaaaatcacttatttaaattgaaata 8805799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 27949431 - 27949352
Alignment:
Q  1 accacacttagatgatgaaatcaca--caaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagag 78  Q
    |||||||||||||||||||||| ||    || ||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  27949431 accacacttagatgatgaaatcgcaatagaaaaaaaaacctagatctatgtgaaaatcacttatttagattgaaacagag 27949352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 41431033 - 41430960
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaa-acctagatctatgtgaaattcacttatttagattgaaata 75  Q
    |||||||||||||||||||||||||  |||||||| |||||||||||||| ||| | |||||||||||||||||||    
T  41431033 accacacttagatgatgaaatcaca--aagaaaaacacctagatctatgtaaaagtgacttatttagattgaaata 41430960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 31581820 - 31581871
Alignment:
Q  27 aaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagag 78  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  31581820 aaagaaaaaaactagatctatgtgaaaatcacttatttagattgaaatagag 31581871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 144
Target Start/End: Complemental strand, 42949691 - 42949577
Alignment:
Q  31 aaaaaacctagatctatgtgaaattcacttatttagattgaaatagag-nnnnnnntataaagaggggtgatttcaggtcaagaattgacctaaaaccat 129  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||         || |||||||||||||||| |||||||||| || ||||| ||     
T  42949691 aaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaaagatgaagaggggtgatttcaagtcaagaattaacataaaatcac 42949592  T
Q  130 cccccaatgaagaaa 144  Q
    ||| ||| |||||||    
T  42949591 ccctcaacgaagaaa 42949577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 78
Target Start/End: Original strand, 39641943 - 39642011
Alignment:
Q  10 agatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagag 78  Q
    |||||||||||||||  | | ||||||||||||||||||||||| ||| ||||||| ||||||||||||    
T  39641943 agatgatgaaatcacgaagaaaaaaaacctagatctatgtgaaaatcatttatttaaattgaaatagag 39642011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 199
Target Start/End: Original strand, 33229152 - 33229261
Alignment:
Q  90 aagaggggtgatttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttg 189  Q
    ||||| |||||||| || |||| |||||||| ||||||| ||  |||||||||||    | |||||||| ||||||||| ||| ||||| |||||||||     
T  33229152 aagagaggtgattttagctcaataattgacccaaaaccacccttcaatgaagaaacagtaagagaaaacctagagagaggaaactagggccggcttgttt 33229251  T
Q  190 gagagggaga 199  Q
    ||||||||||    
T  33229252 gagagggaga 33229261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 200
Target Start/End: Original strand, 31581888 - 31581976
Alignment:
Q  112 gaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggagag 200  Q
    ||||||||| ||||||| ||| |||||||||||    | |||||||| |||||||| ||||||| || || ||||||||||||||||||    
T  31581888 gaattgacccaaaaccacccctcaatgaagaaacagtaagagaaaacctagagagaaaaaattaaggccgacttgttggagagggagag 31581976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 17319302 - 17319254
Alignment:
Q  28 aagaaaaaacctagatctatgtgaaattcacttatttagattgaaataga 77  Q
    |||||||||||||||||||||||||| | | |||||||||||||||||||    
T  17319302 aagaaaaaacctagatctatgtgaaaat-agttatttagattgaaataga 17319254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 36323842 - 36323790
Alignment:
Q  24 cacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatag 76  Q
    |||| |||||||||||| |||||||||||| ||||||||||||| || |||||    
T  36323842 cacagagaaaaaacctaaatctatgtgaaaatcacttatttagaatgtaatag 36323790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 8308152 - 8308104
Alignment:
Q  28 aagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagag 78  Q
    |||||||||||||||||||||||||| ||||  |||||||||||| |||||    
T  8308152 aagaaaaaacctagatctatgtgaaaatcac--atttagattgaattagag 8308104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 98 - 157
Target Start/End: Original strand, 9374721 - 9374780
Alignment:
Q  98 tgatttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaa 157  Q
    |||||||| ||||| |||||||| ||||||||||| |||||||||||  ||| |||||||    
T  9374721 tgatttcatgtcaaaaattgacccaaaaccatccctcaatgaagaaactagaagagaaaa 9374780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 32197871 - 32197943
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaata 75  Q
    ||||||||||||||| |||||||||  ||||||||||||| || ||||  ||| ||| ||||||| |||||||||    
T  32197871 accacacttagatgacgaaatcaca--aagaaaaaacctaaatttatgcaaaaatcatttatttatattgaaata 32197943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 78
Target Start/End: Complemental strand, 18695014 - 18694977
Alignment:
Q  41 gatctatgtgaaattcacttatttagattgaaatagag 78  Q
    ||||||||| ||| ||||||||||||||||||||||||    
T  18695014 gatctatgtaaaaatcacttatttagattgaaatagag 18694977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 106; Significance: 4e-53; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 23947394 - 23947589
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||||| |  |||||||||||||||||||||||||| ||||||||||||||||||||||||        || |||| ||||||    
T  23947394 accacacttagatgatgaaatcaaa--aagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaacgatgaagatgggtga 23947491  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggag 198  Q
    |||||||||||||||||||| ||||||| ||| |||||||||||  ||| || ||||| ||||||||||||| |||||||||||||||||| ||||||    
T  23947492 tttcaggtcaagaattgacccaaaaccacccctcaatgaagaaactagaagaaaaaacctagagagagaaaactagggtcggcttgttggatagggag 23947589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 25064237 - 25064038
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||| ||| | | ||||||||||||||||||||||| ||||||||||||||||||||| ||        || ||||| |||||    
T  25064237 accacacttagatgatgaaattacaaagaaaaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtga 25064138  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggagag 200  Q
    |||||||||||||||||||| ||||||| ||| ||||||||||||   | |||||||| ||||||||||||| ||||| |||||||||||||||||||||    
T  25064137 tttcaggtcaagaattgacccaaaaccacccctcaatgaagaaattgtaagagaaaacctagagagagaaaactagggccggcttgttggagagggagag 25064038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 16419159 - 16418953
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||||||| | | |||||||  |||||||||||||| ||||||||||||||||||||||||        || |||| ||||||    
T  16419159 accacacttagatgatgaaatcacaaaga-aaaaaacaaagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagatgggtga 16419061  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggagag 200  Q
    ||| |||| ||||||||||  ||||||| |||| |||||||||| | ||||||||||| |||||||||||||||| || |||||||||||||||||||||    
T  16419060 ttttaggttaagaattgactcaaaacca-ccccaaatgaagaaacgggatgagaaaacctagagagagaaaattaaggccggcttgttggagagggagag 16418962  T
Q  201 gaagagtat 209  Q
    |||||||||    
T  16418961 gaagagtat 16418953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 12652945 - 12652744
Alignment:
Q  1 accacacttagatgatgaaatcacaca---aagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagagggg 97  Q
    ||||||||||||||||||||||||| |   || |||||| |||||||||||||||| ||||||||||||||||||||||||        || ||||||||    
T  12652945 accacacttagatgatgaaatcacaaaggaaaaaaaaaatctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagagggg 12652846  T
Q  98 tgatttcaggtcaagaattgacctaaaaccatcccccaatgaagaaa-tgagatgagaaaacttagagagagaaaattagggtcggcttgttggagaggg 196  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||||| || || |||||||| ||||||||||||| ||||| || |||||||||||| |    
T  12652845 tgatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaactgtga-gagaaaacctagagagagaaaactagggccgacttgttggagagag 12652747  T
Q  197 aga 199  Q
    |||    
T  12652746 aga 12652744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 31 - 200
Target Start/End: Complemental strand, 8496937 - 8496768
Alignment:
Q  31 aaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtgatttcaggtcaagaattgacctaaaaccatc 130  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||        || ||||||||||||||||||||||||||||||  ||||||| |    
T  8496937 aaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttcaggtcaagaattgactcaaaaccacc 8496838  T
Q  131 ccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggagag 200  Q
    || ||||||||||||   | |||||||| ||||||||||||| ||||  || ||| ||||||||||||||    
T  8496837 cctcaatgaagaaattgtaagagaaaacctagagagagaaaactaggaccgacttattggagagggagag 8496768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 2 - 144
Target Start/End: Original strand, 33740655 - 33740796
Alignment:
Q  2 ccacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtgat 101  Q
    |||||||||||||||||||||||| | | |||||||||| |||||||||||| ||||||||||||||||||||||||        || ||||||||||||    
T  33740655 ccacacttagatgatgaaatcacaaaga-aaaaaacctaaatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagaggggtgat 33740753  T
Q  102 ttcaggtcaagaattgacctaaaaccatcccccaatgaagaaa 144  Q
    || |||||||||||||||| ||||||| ||| |||||||||||    
T  33740754 tttaggtcaagaattgaccaaaaaccacccctcaatgaagaaa 33740796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 194
Target Start/End: Complemental strand, 10228678 - 10228493
Alignment:
Q  3 cacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtgatt 102  Q
    |||||||| |||||||||||||| | | ||||||| ||||| ||||| ||| |||||||||||||||||| |||||        || |||||||||||||    
T  10228678 cacacttaaatgatgaaatcacaaaga-aaaaaacatagatatatgtaaaagtcacttatttagattgaagtagagagagaaagatgaagaggggtgatt 10228580  T
Q  103 tcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagag 194  Q
    |||||||||||||||||| ||||||| ||||||||||||||| | || |||||||| |    |||||| ||||||| |||||||||||||||    
T  10228579 tcaggtcaagaattgacccaaaacca-cccccaatgaagaaacgggaagagaaaacct----agagaagattagggccggcttgttggagag 10228493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 17237361 - 17237536
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||||||||||| ||||||||||  |||||||||||||||||||||||||| | ||||||||||||||||||| ||        || |||||||||||    
T  17237361 accacacttagatgctgaaatcaca--aagaaaaaacctagatctatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagaggggtga 17237458  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattaggg 178  Q
    ||||| |||||||||||||| ||||||| ||| ||||| | ||   |||  ||||||| ||||||||||||| |||||    
T  17237459 tttcatgtcaagaattgacccaaaaccacccctcaatggaaaatctagaaaagaaaacatagagagagaaaactaggg 17237536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 4468559 - 4468437
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||||||| ||||||||||||||  |||||||||||||||||||| ||||| ||||||||||||||||||||||||        || |||||||||||    
T  4468559 accacacttatatgatgaaatcaca--aagaaaaaacctagatctatatgaaaatcacttatttagattgaaatagagagaacaagatgaagaggggtga 4468462  T
Q  101 tttcaggtcaagaattgacctaaaa 125  Q
     |||| |||||||||||||| ||||    
T  4468461 cttcatgtcaagaattgacccaaaa 4468437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 188
Target Start/End: Complemental strand, 33109826 - 33109649
Alignment:
Q  9 tagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtgatttcaggt 108  Q
    |||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||| ||        || |||| ||  ||||| ||||    
T  33109826 tagatgatgaaatcaca--aagaaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagatggacgattttaggt 33109729  T
Q  109 caagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgtt 188  Q
    ||| |||||||| ||||||| ||  |||||||||||   || |||||||| || | |||||||| ||||| |||||||||    
T  33109728 caaaaattgacccaaaaccacccgtcaatgaagaaactggaagagaaaacctaaaaagagaaaactagggccggcttgtt 33109649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 8028194 - 8028391
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||||| | | | ||||||| ||||||||||||||| ||||||||||||||||||| ||||        || ||| |||||||    
T  8028194 accacacttagatgatgaaatcataaaga-aaaaaacttagatctatgtgaaaatcacttatttagattgaaacagagagaaaaagatgaagtggggtga 8028292  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggaga 199  Q
    || ||| |||| |||||||| |||| || | | |||||||||||    |  ||||||| || ||||||||| ||| ||||||||||||| |||||||||    
T  8028293 ttccagatcaataattgacccaaaatcacctctcaatgaagaaactgtactagaaaacctaaagagagaaagttaaggtcggcttgttgaagagggaga 8028391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 4088461 - 4088319
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagag-nnnnnnntataaagaggggtg 99  Q
    ||||||||||||||||||||||| | | | ||||||| ||||||||||||||| |||||||||||||||| |||||||         || |||| |||||    
T  4088461 accacacttagatgatgaaatcaaaaagaaaaaaaac-tagatctatgtgaaaatcacttatttagattgtaatagagataaaaaaaatgaagatgggtg 4088363  T
Q  100 atttcaggtcaagaattgacctaaaaccatcccccaatgaagaa 143  Q
    ||||||||||||||||||||| ||||||| ||| |||| |||||    
T  4088362 atttcaggtcaagaattgacccaaaaccacccctcaataaagaa 4088319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 7876120 - 7876263
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||||||||||||||||||  || | | |||||| |||||||||||||||| ||||||||||||||||||||| ||        || |||| ||||||    
T  7876120 accacacttagatgatgaaattgcaaagaaaaaaaatctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagatgggtga 7876219  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaa 144  Q
    ||| ||||||| |||||| | ||||||| ||| |||||||||||    
T  7876220 ttttaggtcaataattgatccaaaaccacccctcaatgaagaaa 7876263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 8196483 - 8196624
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||||||| |||||||||||||| | | ||||||||||||||||||||||| ||||||||||||||||||||||||        || || | ||||||    
T  8196483 accacacttatatgatgaaatcacaaaga-aaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaatacgggtga 8196581  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaa 144  Q
    ||| |||||||||| ||| | ||||||| ||| |||||||||||    
T  8196582 ttttaggtcaagaactgatccaaaacca-ccctcaatgaagaaa 8196624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 12165841 - 12165657
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||||||||||||| ||| ||||  ||||||||||||| |||||||||||| ||||||||||||||||||||||          || |||||| ||||    
T  12165841 accacacttagatgataaaaccaca--aagaaaaaacctaaatctatgtgaaaatcacttatttagattgaaataggcataaaaagatgaagaggagtga 12165744  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgt 187  Q
    ||||||||||| |||||||| ||||  |  || |||||||||||   || ||||||||  |||||||| ||||||||  ||||||||    
T  12165743 tttcaggtcaataattgacccaaaataactcctcaatgaagaaactggaagagaaaaccgagagagagtaaattaggaccggcttgt 12165657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 17334779 - 17334582
Alignment:
Q  1 accacacttagatgatgaaatcacaca--aagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggt 98  Q
    ||||||||||||| ||||||| ||| |  || ||||||| ||||||||||||||| ||||||||||||||||||||| |         || ||||  |||    
T  17334779 accacacttagattatgaaattacaaagaaaaaaaaaacttagatctatgtgaaaatcacttatttagattgaaataaacagaaaaagatgaagattggt 17334680  T
Q  99 gatttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggag 198  Q
    |||||||| |||||||| || | ||||||| ||| ||||||||||||   | |||||||  ||||||||||||| ||||||||| || ||||||||||||    
T  17334679 gatttcagatcaagaatcgatccaaaacca-ccctcaatgaagaaattgtaagagaaaatctagagagagaaaa-tagggtcggtttattggagagggag 17334582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 7881178 - 7881321
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||||||||||||||||||  || | | |||||| |||||||||||||||| ||||||||||||||||||||| ||        || ||||  |||||    
T  7881178 accacacttagatgatgaaattgcaaagaaaaaaaatctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaaaggtga 7881277  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaa 144  Q
    ||||| ||||| |||||| | ||||||| ||| |||||||||||    
T  7881278 tttcaagtcaataattgatccaaaaccacccctcaatgaagaaa 7881321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 35001591 - 35001515
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagag 78  Q
    ||||||||||||||||||||||||| | | ||||||| ||||||||||| ||| ||||||||||||||| ||||||||    
T  35001591 accacacttagatgatgaaatcacaaaga-aaaaaacatagatctatgtaaaagtcacttatttagattaaaatagag 35001515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 4984643 - 4984795
Alignment:
Q  1 accacacttagatgatgaaatcacaca------aagaaaaaacctagatctat----gtgaaattcacttatttagattgaaatagagnnnnnnntataa 90  Q
    ||||||||||||||||||||||||| |      |  |||||||||||||||||    |||||| ||||||||||||||||||||||||        || |    
T  4984643 accacacttagatgatgaaatcacaaaggaaaaacaaaaaaacctagatctatatatgtgaaaatcacttatttagattgaaatagagagaaaag-atga 4984741  T
Q  91 agaggggtgatttcaggtcaagaattgacctaaaaccatcccccaatgaagaaa 144  Q
    ||| | |||||||||||||||||||||||| ||||||| ||| ||||| |||||    
T  4984742 agatgagtgatttcaggtcaagaattgacccaaaaccacccctcaatggagaaa 4984795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 34489251 - 34489061
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtg-aaattcacttatt--tagattgaaatagagnnnnnnntataaagagggg 97  Q
    ||||||||  ||||||||||||||   ||||||||||||||||||||||| ||| |||||||||  || |||||| |||||        || ||||||||    
T  34489251 accacactcggatgatgaaatcacg--aagaaaaaacctagatctatgtgaaaaatcacttatttatatattgaattagagagaaaaagatgaagagggg 34489154  T
Q  98 tgatttcaggtcaagaattgacctaaaaccatcccccaatgaag-aaatgagatgagaaaacttagagagagaaaattagggtcggcttgttgg 190  Q
    |||||| | ||||| |||||| | ||||||| ||| ||   ||| |||||| | |||||||| |||||||| |||| |||||||| ||||||||    
T  34489153 tgattttaagtcaaaaattgatcaaaaaccacccctcatccaagaaaatga-aagagaaaacctagagagaaaaaactagggtcgacttgttgg 34489061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 74
Target Start/End: Complemental strand, 25337542 - 25337499
Alignment:
Q  31 aaaaaacctagatctatgtgaaattcacttatttagattgaaat 74  Q
    ||||||||||||| ||||||||| ||| ||||||||||||||||    
T  25337542 aaaaaacctagatttatgtgaaaatcatttatttagattgaaat 25337499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 195
Target Start/End: Original strand, 5582880 - 5582913
Alignment:
Q  162 gagagagaaaattagggtcggcttgttggagagg 195  Q
    ||||||||||||||||||| ||||||||||||||    
T  5582880 gagagagaaaattagggtcagcttgttggagagg 5582913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 105; Significance: 2e-52; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 31 - 207
Target Start/End: Original strand, 3850560 - 3850733
Alignment:
Q  31 aaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtgatttcaggtcaagaattgacctaaaaccatc 130  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||        || ||||||||||||||||||||||||||||| | ||||||| |    
T  3850560 aaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagaggggtgatttcaggtcaagaattgatccaaaacca-c 3850658  T
Q  131 ccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggagaggaagagt 207  Q
    ||||||| |||||||| |||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||    
T  3850659 ccccaataaagaaatgggatgagaaaacttagag--agaaaattagggtcggcttgttggagaggaagaggaagagt 3850733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 46934640 - 46934449
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||||| |||| |||||||||| ||||||||||||| ||||||||||||||||||||||||        || |||||||||||    
T  46934640 accacacttagatgatgaaatca-acaa-gaaaaaacctggatctatgtgaaaatcacttatttagattgaaatagagagagaaagatgaagaggggtga 46934543  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagag 194  Q
    ||||||||||| |||||||| ||||||| ||| |||||||||||  ||| |||||||| ||||||||||||||||||| || ||||||||||||    
T  46934542 tttcaggtcaaaaattgaccaaaaaccacccctcaatgaagaaagtagaagagaaaacctagagagagaaaattagggccgacttgttggagag 46934449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 200
Target Start/End: Original strand, 38855114 - 38855310
Alignment:
Q  3 cacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtgatt 102  Q
    ||||||||||||||||||||||| | | |||||| |||||||||||||||| ||||||||||||||||| ||||||        || |||||||||||||    
T  38855114 cacacttagatgatgaaatcacaaagaaaaaaaatctagatctatgtgaaaatcacttatttagattgatatagagagaaaaagatgaagaggggtgatt 38855213  T
Q  103 tcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggagag 200  Q
    |  |||||||||| |||| ||||||| ||| ||||||||||||   | |||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  38855214 ttcggtcaagaat-gacccaaaaccacccctcaatgaagaaatagtaagagaaaacctagagagagaaaactagggtcggcttgttggagagggagag 38855310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 32607467 - 32607271
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||| ||| | | ||||||||||||||||||||||| ||||||||||||||||||||| ||        || ||||||||| |    
T  32607467 accacacttagatgatgaaattacaaagaaaaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaatgatgaagaggggt-a 32607369  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccc-caatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagaggga 197  Q
    |||||||||||||||||||| ||||||| |||| ||||||||||||   | |||||||  ||||||||||||| ||||| ||||||||||||||||||    
T  32607368 tttcaggtcaagaattgacccaaaaccaccccctcaatgaagaaattgtaagagaaaatctagagagagaaaactagggccggcttgttggagaggga 32607271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 44907474 - 44907672
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||| ||| | | ||||||||||||||||||||||| |||||| |||||||||||||| ||        || |||||||||||    
T  44907474 accacacttagatgatgaaattacaaagaaaaaaaacctagatctatgtgaaaatcacttgtttagattgaaataaagagaaaaagatgaagaggggtga 44907573  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggagag 200  Q
    |||||||||||||||||||| ||||||| ||| ||| ||||||||   | |||||||| ||||||||||||| || || ||| |||||||||||||||||    
T  44907574 tttcaggtcaagaattgacccaaaaccacccctcaaagaagaaattgtaggagaaaacctagagagagaaaacta-ggccggtttgttggagagggagag 44907672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 36906120 - 36905927
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||| ||| | | |||||||||| |||||||||||| ||||||||||| ||||||||| ||        || |||| ||||||    
T  36906120 accacacttagatgatgaaattacaaaga-aaaaaacctaaatctatgtgaaaatcacttatttatattgaaataaagagaaaaagatgaagaagggtga 36906022  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagg 195  Q
    |||||||||||||||||||| ||||||||||  ||||||||||||   | |||||||| ||||||||||||||||||| || |||||| ||||||    
T  36906021 tttcaggtcaagaattgacccaaaaccatccatcaatgaagaaattgtaagagaaaacctagagagagaaaattagggccgacttgttagagagg 36905927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 200
Target Start/End: Original strand, 50611495 - 50611691
Alignment:
Q  3 cacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtgatt 102  Q
    ||||||||||||||||||||||| | | ||||||||||||||||| ||||| ||||||||||||||||||||| ||        || |||||||||||||    
T  50611495 cacacttagatgatgaaatcacaaaga-aaaaaacctagatctatatgaaaatcacttatttagattgaaatatagagaaaaagatgaagaggggtgatt 50611593  T
Q  103 tcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggagag 200  Q
    | ||||||| |||||||| ||||||||| | |||||||||||  | | ||||||||||| ||||| |||| ||| | |||||| ||||||||||||||    
T  50611594 ttaggtcaataattgacccaaaaccatctctcaatgaagaaacaataagagaaaacttaaagagaaaaaactagagccggcttattggagagggagag 50611691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 29503460 - 29503275
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||| ||| ||||||||||||||||| ||       ||| |||| ||||||    
T  29503460 accacacttagatgatgaaatcaca--aagaaaaaacctagatctatgtgaaaatcaattatttagattgaaatatagagaaaaatatgaagatgggtga 29503363  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccc-caatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgt 187  Q
    |||||||||||||||||||| |||| || |||| | ||||| ||   ||| ||||||||||||| |||||||| ||||| ||||||||    
T  29503362 tttcaggtcaagaattgacccaaaatcaccccctcgatgaaaaatctagaagagaaaacttagaaagagaaaactagggccggcttgt 29503275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 25631602 - 25631773
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||||||| | | ||||||||||||||||||||||| ||||||||||||||||||||||||        ||  |||||| |||    
T  25631602 accacacttagatgatgaaatcacaaagaaaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatggagagggatga 25631701  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaa 172  Q
    ||| ||||||| |||||||| ||||||| ||| ||||||||||||   | |||||||| |||||||||||||    
T  25631702 ttttaggtcaaaaattgacccaaaaccacccctcaatgaagaaatagtaagagaaaacctagagagagaaaa 25631773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 4178563 - 4178366
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||||||| | | |||||| |||||| ||| ||||| ||||||||||||||||||||||||        || |||| ||||||    
T  4178563 accacacttagatgatgaaatcacaaaga-aaaaaagctagatttatctgaaaatcacttatttagattgaaatagagagaaaaagatgaagatgggtga 4178465  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggaga 199  Q
    ||| |||||||||||||||| ||||||| ||| |||||||||||    | || ||||| ||||||||||||| ||||| || |||||||||||||||||    
T  4178464 ttttaggtcaagaattgacccaaaaccacccctcaatgaagaaacagtaagaaaaaacctagagagagaaaactagggccgacttgttggagagggaga 4178366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 49552300 - 49552441
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||| ||||||||||||||||||  ||||||||||||||||  |||||||||||||||||||||||||||||||||        || |||||||||||    
T  49552300 accacatttagatgatgaaatcaca--aagaaaaaacctagattaatgtgaaattcacttatttagattgaaatagagaaaaaatgatgaagaggggtga 49552397  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaa 144  Q
    |||||||||||||||||||| ||||||| ||  |||||||||||    
T  49552398 tttcaggtcaagaattgacccaaaaccacccatcaatgaagaaa 49552441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 4172565 - 4172368
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||||||| | | ||||||||||||||||||||||| ||||||||||||||||||||||||        || |||| || |||    
T  4172565 accacacttagatgatgaaatcacaaaga-aaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagatggatga 4172467  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggaga 199  Q
    ||| | || ||||||||||| ||||||| ||| |||||||||||    | || ||||  ||||||||||||| ||||| || |||||||||||||||||    
T  4172466 ttttatgttaagaattgacccaaaaccacccctcaatgaagaaacagtaagaaaaaatctagagagagaaaactagggccgacttgttggagagggaga 4172368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 25162434 - 25162242
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||||||||||| ||||||||||||||||||||||||        || |||| ||||||    
T  25162434 accacacttagatgatgaaatcaca-aagaaaaaaacctagatctatgtgaaa-tcacttatttagattgaaatagagagaaaaagatgaagatgggtga 25162337  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagg 195  Q
    |||||  ||||||||||||  ||||||| ||| || ||||||||    | |||||||| ||||||||||||| ||| | ||| ||||||||||||    
T  25162336 tttcaaatcaagaattgacacaaaaccacccctcagtgaagaaactgtaagagaaaacctagagagagaaaactagagccggtttgttggagagg 25162242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 39917473 - 39917664
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||||||||||||||||||||||  | |||||||||||||||||||||||| |||||||||||||||||| |||||       ||| |||| || |||    
T  39917473 accacacttagatgatgaaatcaca--aggaaaaaacctagatctatgtgaaaatcacttatttagattgaattagagagaaaaatatgaagatggatga 39917570  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagag 194  Q
    |||||||||||||||||||| |||||||  || || ||||||||    | | |||||| ||||||||||||| || ||  || |||||||||||    
T  39917571 tttcaggtcaagaattgacccaaaaccactcctcagtgaagaaactgtaagggaaaacctagagagagaaaactaaggctggtttgttggagag 39917664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 12116095 - 12115898
Alignment:
Q  1 accacacttagatgatgaaatcacaca--aagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggt 98  Q
    ||||||||||||| ||||||| ||| |  || ||||||||||||||| ||||||| ||||||||||||||||||||| ||        || ||||| | |    
T  12116095 accacacttagataatgaaattacaaagaaaaaaaaaacctagatctttgtgaaaatcacttatttagattgaaataaagaggaaaagatgaagagagat 12115996  T
Q  99 gatttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagaggg 196  Q
    |||||||||||||||||||||  ||||||| ||| ||||||||||||   |  ||||||| ||||||||||||| ||| | || ||||||||||||||    
T  12115995 gatttcaggtcaagaattgactcaaaaccacccctcaatgaagaaattgtaaaagaaaacctagagagagaaaactagagccgacttgttggagaggg 12115898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 38440654 - 38440795
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||| ||| ||||||||| |  |||||||||||||||||||||||||| ||||||||||||||||||||||||        ||||||||| ||||    
T  38440654 accacactttgatcatgaaatcaaa--aagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagataaagaggagtga 38440751  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaa 144  Q
    |||||||||||||||||||  ||||||| |   |||||||||||    
T  38440752 tttcaggtcaagaattgactcaaaaccaccattcaatgaagaaa 38440795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 14464508 - 14464363
Alignment:
Q  1 accacacttagatgatgaaatcacaca-aagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtg 99  Q
    |||||||||||| |||||||||||| | || ||||||| ||||||||||||||| ||||||||||||||||||||| ||        || || |||||||    
T  14464508 accacacttagaagatgaaatcacaaagaaaaaaaaacttagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaataggggtg 14464409  T
Q  100 atttcaggtcaagaattgacctaaaaccatcccccaatgaagaaat 145  Q
    ||||||||||||||||||||| ||||||| ||  ||||||| ||||    
T  14464408 atttcaggtcaagaattgacccaaaaccacccttcaatgaaaaaat 14464363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 51202330 - 51202520
Alignment:
Q  1 accacacttagatgatgaaatcacaca-aagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtg 99  Q
    ||||||||||||||||||||||||| | || |||||||||||||||||||||||       ||||||||||||||||||       ||| |||| |||||    
T  51202330 accacacttagatgatgaaatcacaaagaaaaaaaaacctagatctatgtgaaa-------atttagattgaaatagagagaaaaatatgaagatgggtg 51202422  T
Q  100 atttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagaggga 197  Q
    ||||||||||||||||||||| |||| || ||| |||| ||||||    | |||||||| || ||||| |||| || || || |||||||||||||||    
T  51202423 atttcaggtcaagaattgacccaaaatcacccctcaataaagaaactgtaagagaaaacctaaagagaaaaaactaaggccgacttgttggagaggga 51202520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 17237803 - 17237670
Alignment:
Q  1 accacacttagatgatgaaatcacaca-aagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtg 99  Q
    ||||||||||||||||||||||||| | || |||||||||| |||||||||||| ||||||||||||||||||||||||        || |||| |  ||    
T  17237803 accacacttagatgatgaaatcacaaagaaaaaaaaacctaaatctatgtgaaaatcacttatttagattgaaatagagagaaacagatgaagatgaatg 17237704  T
Q  100 atttcaggtcaagaattgacctaaaaccatcccc 133  Q
    |||| |||||||||||||||||| ||||| ||||    
T  17237703 attttaggtcaagaattgacctagaaccaccccc 17237670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 2342490 - 2342294
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||||||| | | ||||||  ||||| ||||||||| ||||||||||||||||||||||||        || ||||||| |||    
T  2342490 accacacttagatgatgaaatcacaaaga-aaaaaatatagatatatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagagggttga 2342392  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggaga 199  Q
     |||||||  |||||||||| ||||||| ||| ||| |||||||    | |||||||| || | | | |||||||||| |||||| |||||||||||||    
T  2342391 -ttcaggtttagaattgacccaaaaccacccctcaacgaagaaactgtaagagaaaacctataaaaaaaaaattagggccggcttattggagagggaga 2342294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 35499274 - 35499419
Alignment:
Q  1 accacacttagatgatgaaatcacaca--aagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaaga-gggg 97  Q
    ||||||||||||| ||||||| ||| |  || ||||||||||||||||||||||| ||||||||||||||||||||| ||        || |||| ||||    
T  35499274 accacacttagataatgaaattacaaagaaaaaaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggg 35499373  T
Q  98 tgatttcaggtcaagaattgacctaaaaccatcccccaatgaagaa 143  Q
    ||||||||||| || |||||||| ||||||| ||| ||||||||||    
T  35499374 tgatttcaggtaaaaaattgaccaaaaaccacccctcaatgaagaa 35499419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 30648795 - 30648860
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttaga 67  Q
    ||||||||||||||||||||||||| | | ||||||| ||||||||||||||| |||||||||||||    
T  30648795 accacacttagatgatgaaatcacaaagaaaaaaaac-tagatctatgtgaaagtcacttatttaga 30648860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 90 - 200
Target Start/End: Original strand, 30648904 - 30649012
Alignment:
Q  90 aagaggggtgatttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttg 189  Q
    |||||||||| || |||||||| |||||||| |||| |  ||||||||||||||| | || |||||||| |||||||| |||||||||| || |||||||    
T  30648904 aagaggggtg-ttccaggtcaaaaattgacccaaaaaccacccccaatgaagaaacg-gaagagaaaacctagagagataaaattagggccgacttgttg 30649001  T
Q  190 gagagggagag 200  Q
    |||| ||||||    
T  30649002 gagatggagag 30649012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 128
Target Start/End: Complemental strand, 46178550 - 46178449
Alignment:
Q  28 aagaaaaaacctagatctatgtg-aaattcacttatttagattgaaatagagnnnnnnntataaagaggggtgatttcaggtcaagaattgacctaaaac 126  Q
    ||||||||||||||||||||||| |||  ||||||||||||||||| |||||        || ||||||| |||||||||||||  |||||||| |||||    
T  46178550 aagaaaaaacctagatctatgtgaaaaagcacttatttagattgaattagagagaaaaagatgaagagggatgatttcaggtcataaattgacccaaaac 46178451  T
Q  127 ca 128  Q
    ||    
T  46178450 ca 46178449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 78
Target Start/End: Complemental strand, 31794040 - 31794002
Alignment:
Q  40 agatctatgtgaaattcacttatttagattgaaatagag 78  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  31794040 agatctatgtgaaaatcacttatttagattgaaatagag 31794002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 22802999 - 22802897
Alignment:
Q  24 cacaaagaaaaaacctagatctatgtgaaat-tcacttatttagattgaaatagagnnnnnnntataaagaggggtgatttcaggtcaagaattgaccta 122  Q
    |||| ||| |||||||||||||| ||||||  ||||||||||||||||||||||||        || |||||| ||||||||| ||||| |||||||| |    
T  22802999 cacatagagaaaacctagatctacgtgaaaaatcacttatttagattgaaatagagagaaaaagatgaagaggagtgatttcatgtcaaaaattgaccca 22802900  T
Q  123 aaa 125  Q
    |||    
T  22802899 aaa 22802897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 36735316 - 36735389
Alignment:
Q  90 aagaggggtgatttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttaga 163  Q
    ||||||| ||||||||||| || |||||||| ||||||| | | |||||||||||  ||| |||||||||||||    
T  36735316 aagagggatgatttcaggtaaaaaattgaccaaaaaccacctctcaatgaagaaactagaagagaaaacttaga 36735389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 42719515 - 42719443
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagag 78  Q
    ||||||||||||||||||| |||||      |||||||||||||||  ||||| ||||||||||| ||||||||||||    
T  42719515 accacacttagatgatgaactcaca-----taaaaacctagatctacatgaaaatcacttatttaaattgaaatagag 42719443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 194
Target Start/End: Original strand, 47980839 - 47980935
Alignment:
Q  97 gtgatttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagag 194  Q
    ||||||||||||||| |||||||| ||||||| | | |||||||||||    | |||||||| |||| ||| ||||||||||| ||||| ||||||||    
T  47980839 gtgatttcaggtcaaaaattgacccaaaaccaccactcaatgaagaaactgcaagagaaaacctagacaga-aaaattagggtaggcttattggagag 47980935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 194
Target Start/End: Original strand, 47990126 - 47990222
Alignment:
Q  97 gtgatttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagag 194  Q
    ||||||||||||||| |||||||| ||||||| | | |||||||||||    | |||||||| |||| ||| ||||||||||| ||||| ||||||||    
T  47990126 gtgatttcaggtcaaaaattgacccaaaaccaccactcaatgaagaaactgcaagagaaaacctagacaga-aaaattagggtaggcttattggagag 47990222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 194
Target Start/End: Original strand, 47999413 - 47999509
Alignment:
Q  97 gtgatttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagag 194  Q
    ||||||||||||||| |||||||| ||||||| | | |||||||||||    | |||||||| |||| ||| ||||||||||| ||||| ||||||||    
T  47999413 gtgatttcaggtcaaaaattgacccaaaaccaccactcaatgaagaaactgcaagagaaaacctagacaga-aaaattagggtaggcttattggagag 47999509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 194
Target Start/End: Original strand, 48008700 - 48008796
Alignment:
Q  97 gtgatttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagag 194  Q
    ||||||||||||||| |||||||| ||||||| | | |||||||||||    | |||||||| |||| ||| ||||||||||| ||||| ||||||||    
T  48008700 gtgatttcaggtcaaaaattgacccaaaaccaccactcaatgaagaaactgcaagagaaaacctagacaga-aaaattagggtaggcttattggagag 48008796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 3848995 - 3849030
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaa 36  Q
    |||||||||| |||||||||||||||||||||||||    
T  3848995 accacacttacatgatgaaatcacacaaagaaaaaa 3849030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 128
Target Start/End: Original strand, 6823561 - 6823599
Alignment:
Q  90 aagaggggtgatttcaggtcaagaattgacctaaaacca 128  Q
    ||||||||||||||||| ||||||||||||| |||||||    
T  6823561 aagaggggtgatttcagatcaagaattgacccaaaacca 6823599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 205
Target Start/End: Original strand, 19222413 - 19222447
Alignment:
Q  171 aattagggtcggcttgttggagagggagaggaaga 205  Q
    |||||||| ||||||||||||||||||||||||||    
T  19222413 aattagggccggcttgttggagagggagaggaaga 19222447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 33579817 - 33579772
Alignment:
Q  27 aaagaaaaaacctagatctatgtgaaattcacttatttagattgaaa 73  Q
    ||||||||||| ||||| ||||||||| |||||||||||||||||||    
T  33579817 aaagaaaaaac-tagatatatgtgaaaatcacttatttagattgaaa 33579772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 200
Target Start/End: Complemental strand, 25849726 - 25849622
Alignment:
Q  95 gggtgatttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagag 194  Q
    ||||||||||| ||||| |||||||  ||||||| ||| |||| |||||    || || ||||| |||||||| |||| ||||| |||||| ||||||||    
T  25849726 gggtgatttcaagtcaaaaattgactcaaaaccacccctcaattaagaagctggaagaaaaaacctagagaga-aaaactagggccggcttattggagag 25849628  T
Q  195 ggagag 200  Q
    ||||||    
T  25849627 ggagag 25849622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 6913249 - 6913293
Alignment:
Q  29 agaaaaaacctagatctatgtgaaattcacttatttagattgaaa 73  Q
    ||||||||||| ||||||||||||| |||| ||| ||||||||||    
T  6913249 agaaaaaacctcgatctatgtgaaaatcacctatctagattgaaa 6913293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 30829970 - 30829897
Alignment:
Q  3 cacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagag 78  Q
    |||||| |||||||||||||||   | |||| ||||||||||||||| ||| || || |||| |||||||||||||    
T  30829970 cacactcagatgatgaaatcacg--atgaaacaacctagatctatgtcaaaatccctcatttggattgaaatagag 30829897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 101; Significance: 4e-50; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 22927946 - 22928138
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||||||| | | ||||||| ||||||| ||||||| ||||||||||||||||||||||||        || || ||||||||    
T  22927946 accacacttagatgatgaaatcacaaagaaaaaaaac-tagatctgtgtgaaagtcacttatttagattgaaatagagagaaaaagatgaaaaggggtga 22928044  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagag 194  Q
    |||||||||||||||||||| ||||||| |||| |||||||||| | || |||||||| ||||||||||||||||||| |||||||||||||||    
T  22928045 tttcaggtcaagaattgacccaaaaccaccccctaatgaagaaacgggaagagaaaacctagagagagaaaattagggccggcttgttggagag 22928138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 2 - 199
Target Start/End: Complemental strand, 42311280 - 42311084
Alignment:
Q  2 ccacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtgat 101  Q
    ||||||||| |||||||||||||| | | ||||||||||||||||||||||  ||||||||||||||||||||||||        || ||||||| ||||    
T  42311280 ccacacttaaatgatgaaatcacaaaga-aaaaaacctagatctatgtgaatatcacttatttagattgaaatagagagaaaatgatgaagagggatgat 42311182  T
Q  102 ttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggaga 199  Q
    ||||||||||||||||||| ||||||| ||| || ||||||||    | |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  42311181 ttcaggtcaagaattgacccaaaaccacccctcagtgaagaaactctaagagaaaacctagagagagaaaattagggtcggcttgttggagagggaga 42311084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 46822016 - 46821819
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||| |||||||||||||||| ||| | | |||||| |||||||||||||||| ||||||||||||||||||||| ||        || |||||||||||    
T  46822016 accatacttagatgatgaaattacaaagaaaaaaaatctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtga 46821917  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggag 198  Q
    |||||||||||||||||||| ||||||| ||| ||||||| |||| | | |||||||| ||||||||||||| ||||| |||||||||||||||||||    
T  46821916 tttcaggtcaagaattgacccaaaaccacccctcaatgaaaaaattataagagaaaacctagagagagaaaactagggccggcttgttggagagggag 46821819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 23085522 - 23085325
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagagggg-tg 99  Q
    |||||||||||||||| |||||||| | | ||||||||||||||||||||||| ||| |||||||||||||||||||         || |||||||| ||    
T  23085522 accacacttagatgataaaatcacaaaga-aaaaaacctagatctatgtgaaagtcaattatttagattgaaatagaaagaaaaagatgaagagggggtg 23085424  T
Q  100 atttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggaga 199  Q
    |||||| ||||| |||||||| ||||||| ||||||||||||||| | || |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  23085423 atttcaagtcaataattgacccaaaacca-cccccaatgaagaaacg-gaagagaaaacctagagagagaaaattagggtcggcttgttggagagggaga 23085326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 26583715 - 26583517
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||||||| | | ||||||||||||| ||| ||||| ||||||||||||||||||||||||        || |||||||||||    
T  26583715 accacacttagatgatgaaatcacaaaga-aaaaaacctagatatatatgaaaatcacttatttagattgaaatagagataaaaagatgaagaggggtga 26583617  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggagag 200  Q
    |||||||||||||||||||| ||||||| ||| |||||||||||    | || ||||| |||| |||||||| ||||| |||||||||||||||||||||    
T  26583616 tttcaggtcaagaattgaccaaaaaccacccctcaatgaagaaactgtaagaaaaaacctagaaagagaaaactagggccggcttgttggagagggagag 26583517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 1485333 - 1485521
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||||||||||||||||||||||  ||||||||| |||||||||||||||| ||||||||||||||||||||||||        || |||| ||||||    
T  1485333 accacacttagatgatgaaatcaca--aagaaaaaatctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagacgggtga 1485430  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggaga 193  Q
    ||| |||||||||||| ||| ||||||| ||||||||||||||| | || |||||||| |  |||||||||||||||| || |||||||||||    
T  1485431 ttttaggtcaagaattaacccaaaaccaccccccaatgaagaaacgggaagagaaaacct--agagagaaaattagggccgacttgttggaga 1485521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 2843305 - 2843501
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||| ||| |||   ||||||||||||||||||||| ||||||||||||||||||||| ||        || ||||||||||     
T  2843305 accacacttagatgatgaaattacaaaaa---aaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgt 2843401  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggagag 200  Q
    |||||||||||||||||||| ||||||| ||  ||||||||||||   | |||||||| ||||||||||||| ||||  || ||||||||||||||||||    
T  2843402 tttcaggtcaagaattgacccaaaaccacccttcaatgaagaaattgtaagagaaaacctagagagagaaaactaggaccgccttgttggagagggagag 2843501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 35667308 - 35667502
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||||| |  |||||||||||||||||||||||||| ||||||||||||||||||||||||       ||| |||| ||||||    
T  35667308 accacacttagatgatgaaatcaaa--aagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaatatgaagaagggtga 35667405  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggag 198  Q
    ||| | |||||||||||| | ||||||| ||| ||||||| |||| ||| ||||||||||| | | |||||| ||||| || ||||||||||| ||||    
T  35667406 ttttaagtcaagaattgatccaaaaccacccctcaatgaaaaaattagaagagaaaactta-aaaaagaaaactagggccgacttgttggagaaggag 35667502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 26492366 - 26492167
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||||||| | | ||||||| ||||||||||||||| ||||||||||| ||||||||||||        || ||||||||| |    
T  26492366 accacacttagatgatgaaatcacaaagaaaaaaaac-tagatctatgtgaaaatcacttatttaaattgaaatagagagaaaaagatgaagaggggtta 26492268  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggagag 200  Q
    |||||||||||||||||||| ||||||| ||| |||||||||||    | || ||||  |||||||| |||| ||||| |||||| |||||||||| |||    
T  26492267 tttcaggtcaagaattgacccaaaaccacccctcaatgaagaaactgtaagacaaaatctagagagataaaactagggccggcttattggagagggggag 26492168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 198
Target Start/End: Complemental strand, 20116572 - 20116388
Alignment:
Q  12 atgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtgatttcaggtcaa 111  Q
    ||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||         || |||| |||||||||||||||||    
T  20116572 atgatgaaatcaca--aagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagatagaaaaagatgaagaagggtgatttcaggtcaa 20116475  T
Q  112 gaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggag 198  Q
     |||||||| ||||| | ||| || ||||||||   || |||||||| ||||||||||||| ||||| || ||||||||||| ||||    
T  20116474 aaattgacccaaaactacccctcattgaagaaacttgaagagaaaacatagagagagaaaactagggccgacttgttggagaaggag 20116388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 21266391 - 21266195
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||||||||||||||||||||   |||  |||| ||||||||||||||||| ||||||||||||||||||||| ||        || ||||| |||||    
T  21266391 accacacttagatgatgaaatca---aaaagaaaaccctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtga 21266295  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggagag 200  Q
    ||||| ||||| |||||||| ||||||| ||| |||| ||||||   || || |||||||| |||||||||| ||||| |||||| ||||||||||||||    
T  21266294 tttcatgtcaataattgacccaaaaccacccctcaataaagaaactggaagaaaaaacttaaagagagaaaactagggccggcttattggagagggagag 21266195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 35496251 - 35496426
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||||||| | | ||||||||||||||||||||||| ||||||| ||||||||||||||||        || ||||  |||||    
T  35496251 accacacttagatgatgaaatcacaaaga-aaaaaacctagatctatgtgaaaatcacttaattagattgaaatagagagaaaaagatgaagattggtga 35496349  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagg 177  Q
    ||| |||||||||||||||| ||||||| ||| |||||||||||    | |||||||| || |||||||||||||||    
T  35496350 ttttaggtcaagaattgacccaaaaccacccctcaatgaagaaacagtaagagaaaacctaaagagagaaaattagg 35496426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 1448906 - 1449098
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||||||||||||||||||||||  || |||||| |||||||||||||||| ||||||||||||||||||||||||        || |||   ||| |    
T  1448906 accacacttagatgatgaaatcaca--aataaaaaatctagatctatgtgaaaatcacttatttagattgaaatagagagaaagagatgaagtttggtta 1449003  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagg 195  Q
    |||||||||||||||||||| ||||||| ||| |||  |||||    || || ||||| ||||||||||||| ||||| ||||||||||||||||    
T  1449004 tttcaggtcaagaattgacccaaaaccacccctcaacaaagaatctggaagaaaaaacctagagagagaaaactagggccggcttgttggagagg 1449098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 175
Target Start/End: Original strand, 433769 - 433939
Alignment:
Q  2 ccacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtgat 101  Q
    |||||||||||||||||||||||| | | |||||| |||||||||||||||| ||| ||||||||||||||||||||        || || |||| ||||    
T  433769 ccacacttagatgatgaaatcacaaaga-aaaaaatctagatctatgtgaaagtcatttatttagattgaaatagagagaaaaagatgaaaagggatgat 433867  T
Q  102 ttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaatta 175  Q
    |||||||||| |||||||| |||||||  ||||||||||||||  ||| |||||||| |||||| |||||||||    
T  433868 ttcaggtcaaaaattgacccaaaacca--ccccaatgaagaaaccagaagagaaaacctagagaaagaaaatta 433939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 23425448 - 23425573
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||||||| ||||||||||||||  |||||||||||||||||||||| ||| ||||||||||||||||||||| ||        || |||||||||||    
T  23425448 accacacttaaatgatgaaatcaca--aagaaaaaacctagatctatgtaaaaatcacttatttagattgaaatatagagaaaaagatgaagaggggtga 23425545  T
Q  101 tttcaggtcaagaattgacctaaaacca 128  Q
    |||||||||||||||||||| |||||||    
T  23425546 tttcaggtcaagaattgacccaaaacca 23425573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 96 - 201
Target Start/End: Original strand, 12539125 - 12539230
Alignment:
Q  96 ggtgatttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagg 195  Q
    ||||||||||||||||||||||||| ||||||| ||| |||||||||||   || |||||||  ||||||||||||| ||||||||||||||||||||||    
T  12539125 ggtgatttcaggtcaagaattgaccaaaaaccacccctcaatgaagaaactggaagagaaaatctagagagagaaaactagggtcggcttgttggagagg 12539224  T
Q  196 gagagg 201  Q
    ||||||    
T  12539225 gagagg 12539230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 200
Target Start/End: Complemental strand, 32684656 - 32684486
Alignment:
Q  32 aaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtgatttcaggtcaagaattgacctaaaaccatcc 131  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||        || ||||   |||||||||||||||||||||||| ||||||| ||    
T  32684656 aaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaacgatgaagacatgtgatttcaggtcaagaattgacccaaaaccaccc 32684557  T
Q  132 cccaatgaagaaatgagatgagaaaactt--agagagagaaaattagggtcggcttgttggagagggagag 200  Q
    | |||||||||||    | |||||||| |  ||||||||| |  ||||| |||||||||||||||||||||    
T  32684556 ctcaatgaagaaaccgtaagagaaaacctagagagagagagagctagggccggcttgttggagagggagag 32684486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 48207902 - 48207778
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||||||||||||||||||||||  |||||||||| ||||||||||||||| |||||||||||||||||||||  |        || |||||||||||    
T  48207902 accacacttagatgatgaaatcaca--aagaaaaaacatagatctatgtgaaaatcacttatttagattgaaatattgagaaaaagatgaagaggggtga 48207805  T
Q  101 tttcaggtcaagaattgacctaaaacca 128  Q
    |||||||||||||| ||||| |||||||    
T  48207804 tttcaggtcaagaa-tgacccaaaacca 48207778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 46339055 - 46338885
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||||||| |||||||||| ||| | | |||||| |||||||||||||||| ||||||||||| ||||||||| ||        || ||||||| | |    
T  46339055 accacacttaaatgatgaaattacaaagaaaaaaaagctagatctatgtgaaaatcacttatttacattgaaataaagagaaaaagatgaagagggataa 46338956  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaa 171  Q
    |||||||||||||||||||| ||||| | ||| ||||||||||||   | |||||||||  ||||||||||    
T  46338955 tttcaggtcaagaattgacccaaaactacccctcaatgaagaaattgtaagagaaaactcggagagagaaa 46338885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 125
Target Start/End: Original strand, 42067139 - 42067259
Alignment:
Q  3 cacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtgatt 102  Q
    ||||||||||||||||||||| |  ||||||||| ||| |||||||||||| ||||||||||||||||||||| ||        || ||||| |||||||    
T  42067139 cacacttagatgatgaaatcaga--aagaaaaaatctatatctatgtgaaaatcacttatttagattgaaatatagataacaagatgaagagaggtgatt 42067236  T
Q  103 tcaggtcaagaattgacctaaaa 125  Q
    |||||||||||||||||| ||||    
T  42067237 tcaggtcaagaattgacccaaaa 42067259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 45199108 - 45199278
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||||||||||||||||||||||  |||||||||| ||||||||| ||||| ||||||||||| ||| ||||| ||        || |||| ||||||    
T  45199108 accacacttagatgatgaaatcaca--aagaaaaaacttagatctatatgaaaatcacttatttaaattaaaatatagagaaaaagatgaagatgggtga 45199205  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaat 173  Q
    ||||||||||| | |||| | ||||||| |||  |||| | ||   ||| |||||||||||||||||||||||    
T  45199206 tttcaggtcaatagttgatccaaaaccacccctgaatggaaaatctagaagagaaaacttagagagagaaaat 45199278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 42408363 - 42408225
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||||||| |||||||||||||| | | |||||||||||||| ||||||||  || ||||||||||||||||| ||        || |||| || |||    
T  42408363 accacacttaaatgatgaaatcacaaaga-aaaaaacctagatccatgtgaaaaacaattatttagattgaaataaagagaaaaagatgaagatggatga 42408265  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaa 140  Q
    |||||||||||||| ||||| ||||||||||| |||||||    
T  42408264 tttcaggtcaagaactgaccaaaaaccatccctcaatgaa 42408225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 17223075 - 17223136
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttattt 64  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||    
T  17223075 accacacttagatgatgaaatcaca--aagaaaaaacctagatctatgtgaaaatcacttattt 17223136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 31235869 - 31236045
Alignment:
Q  2 ccacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaat-tcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||||||||||| ||||||||  | ||||||  |||||||||||||||||  ||||||||||||||||||||||||        || |||||||| ||    
T  31235869 ccacacttagatgacgaaatcacgtagagaaaa--cctagatctatgtgaaaaatcacttatttagattgaaatagagagaaaaagatgaagaggggaga 31235966  T
Q  101 tttcaggtcaagaattgacctaaaacca-tcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggt 179  Q
    ||||| ||||| |||||||| |||| || |||| |||||||||||   || |||||||  |||||||| |||||||||||    
T  31235967 tttcatgtcaaaaattgacccaaaatcactccctcaatgaagaaaatggaagagaaaatctagagaga-aaaattagggt 31236045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 14627955 - 14628031
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagag 78  Q
    |||||||||||||||||||||||||   | |||||||||| || ||||||||| |||||||||||||||||| |||||    
T  14627955 accacacttagatgatgaaatcacaagga-aaaaaacctatatttatgtgaaaatcacttatttagattgaattagag 14628031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 194
Target Start/End: Original strand, 32522028 - 32522198
Alignment:
Q  28 aagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataa-----agaggggtgatttcaggtcaagaattgaccta 122  Q
    |||||||||| || |||||||||||| ||||||||||| ||||||||||||        | ||     ||| ||||||||||||||||| | | ||||||    
T  32522028 aagaaaaaacataaatctatgtgaaaatcacttatttaaattgaaatagagagagaaaaaaaagatgaagatgggtgatttcaggtcaa-attcgaccta 32522126  T
Q  123 aaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagag 194  Q
    |||||||||| |||||||||| |  || |||||||| |||||||  |||| || || || ||||||||||||    
T  32522127 aaaccatccctcaatgaagaagttggaagagaaaacctagagaggaaaaactaaggccgacttgttggagag 32522198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 6558878 - 6558817
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttat 62  Q
    ||||||||||||||||||||||||| | |  ||||||||| |||||||||||| ||||||||    
T  6558878 accacacttagatgatgaaatcacaaagaagaaaaacctaaatctatgtgaaaatcacttat 6558817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 17499738 - 17499799
Alignment:
Q  4 acacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttaga 67  Q
    ||||||||||||||||||||||  | |||||||||||||||| ||||||| | |||||||||||    
T  17499738 acacttagatgatgaaatcaca--atgaaaaaacctagatctttgtgaaaataacttatttaga 17499799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 17553476 - 17553415
Alignment:
Q  4 acacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttaga 67  Q
    ||||||||||||||||||||||  | |||||||||||||||| ||||||| | |||||||||||    
T  17553476 acacttagatgatgaaatcaca--atgaaaaaacctagatctttgtgaaaataacttatttaga 17553415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 36143841 - 36143791
Alignment:
Q  28 aagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagag 78  Q
    ||||||||||||||||||| ||||||  ||||||||||||||||| |||||    
T  36143841 aagaaaaaacctagatctacgtgaaaaacacttatttagattgaattagag 36143791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 72
Target Start/End: Original strand, 7640887 - 7640928
Alignment:
Q  31 aaaaaacctagatctatgtgaaattcacttatttagattgaa 72  Q
    |||||||||| |||||||||||| ||||||||||||||||||    
T  7640887 aaaaaacctatatctatgtgaaaatcacttatttagattgaa 7640928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 23786576 - 23786508
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaa 72  Q
    |||||||||||||||||||    |||||||||||||  ||||| | ||||||| ||||||||||||||||||    
T  23786576 accacacttagatgatgaat---cacaaagaaaaaatttagatatgtgtgaaaatcacttatttagattgaa 23786508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 78
Target Start/End: Complemental strand, 5546331 - 5546284
Alignment:
Q  31 aaaaaacctagatctatgtgaaattcacttatttagattgaaatagag 78  Q
    ||||||| || || ||||||||| ||||||||||||||||||||||||    
T  5546331 aaaaaacttaaatttatgtgaaaatcacttatttagattgaaatagag 5546284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 7740635 - 7740568
Alignment:
Q  6 acttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaata 75  Q
    |||||||| |||||||||||  ||||||||| ||| |||||||||||| | | ||||||| |||||||||    
T  7740635 acttagattatgaaatcaca--aagaaaaaatctaaatctatgtgaaaataatttatttaaattgaaata 7740568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 128
Target Start/End: Complemental strand, 17611044 - 17611006
Alignment:
Q  90 aagaggggtgatttcaggtcaagaattgacctaaaacca 128  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  17611044 aagaggggtgatttcaggtcataaattgacctaaaacca 17611006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 3860923 - 3860882
Alignment:
Q  32 aaaaacctagatctatgtgaaattcacttatttagattgaaa 73  Q
    ||||||| |||||||||||||| ||||||||||| |||||||    
T  3860923 aaaaaccaagatctatgtgaaaatcacttatttatattgaaa 3860882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 43369867 - 43369908
Alignment:
Q  28 aagaaaaaacctagatctatgtgaaattcacttatttagatt 69  Q
    |||||||||| || |||||||||||| |||||||||||||||    
T  43369867 aagaaaaaacttatatctatgtgaaaatcacttatttagatt 43369908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 24770228 - 24770161
Alignment:
Q  5 cacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaa 73  Q
    |||||||| || ||||||||| ||||||||||  | ||| |||||||||  ||||||||||||||||||    
T  24770228 cacttagacgacgaaatcaca-aaagaaaaaaatttgatatatgtgaaaaccacttatttagattgaaa 24770161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 45630065 - 45630113
Alignment:
Q  151 gagaaaacttagagagagaaaattagggtcggcttgttggagagggaga 199  Q
    |||||||| ||||||||||||| ||| ||||| ||||||| ||||||||    
T  45630065 gagaaaacgtagagagagaaaactagtgtcggtttgttggggagggaga 45630113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 1e-49; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 6972823 - 6972616
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||||||| | | ||||||| | ||||||||| ||| ||||||||||||||||||||| ||        || ||||| |||||    
T  6972823 accacacttagatgatgaaatcacaaagaaaaaaaacatggatctatgtaaaagtcacttatttagattgaaatacagataaaaagatgaagagaggtga 6972724  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggagag 200  Q
    |||||| ||||||||||||| ||||||| |||||||||||||||   || || ||||| ||||||||||||||||||| |||||||||||||||||||||    
T  6972723 tttcagatcaagaattgacccaaaacca-cccccaatgaagaaaccggaagaaaaaacctagagagagaaaattagggccggcttgttggagagggagag 6972625  T
Q  201 gaagagtat 209  Q
    |||||||||    
T  6972624 gaagagtat 6972616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 56194614 - 56194417
Alignment:
Q  1 accacacttagatgatgaaatcacaca-aagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtg 99  Q
    ||||||||||||||||||||||||| | || ||||||||||||||||||||||| ||||||||||||||||||||||||        || ||||||  ||    
T  56194614 accacacttagatgatgaaatcacaaagaaaaaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagaggtttg 56194515  T
Q  100 atttcaggtcaagaattgacctaaa---accatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagag 194  Q
    ||||||||||||||||||||| |||   |||| ||| ||||||||||| | ||||||||||| |||||||| ||||||| ||||||||||||||||||    
T  56194514 atttcaggtcaagaattgacccaaaaccaccacccctcaatgaagaaacgggatgagaaaacctagagagaaaaaattaaggtcggcttgttggagag 56194417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 10389830 - 10390025
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||||| |  | |||||||||||||||||||||||| ||||||||||||||||||||||||        || |||| | ||||    
T  10389830 accacacttagatgatgaaatcaaa--aggaaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagatgagtga 10389927  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggag 198  Q
    |||||||||||||||||||| ||||||| ||| |||||||||||  | | |||||||| |||| |||||||| ||||| |||||||||||||||||||    
T  10389928 tttcaggtcaagaattgacccaaaaccacccctcaatgaagaaactataagagaaaacctagaaagagaaaactagggccggcttgttggagagggag 10390025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 1531921 - 1531725
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagag-nnnnnnntataaagaggggtg 99  Q
    ||||||||||||||||||||||||| | | |||||| |||||||||||||||| ||||||||||||||||||||||||         |||||||||||||    
T  1531921 accacacttagatgatgaaatcacaaagaaaaaaaatctagatctatgtgaaaatcacttatttagattgaaatagagagagaaaagataaagaggggtg 1531822  T
Q  100 atttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagaggg 196  Q
    ||||||||||||||||||||| || |||| ||| |||||||||||    | |||||||| |||| |||||||| ||||  |||||||||||||||||    
T  1531821 atttcaggtcaagaattgacccaataccacccctcaatgaagaaactgtaagagaaaacctagaaagagaaaactaggaccggcttgttggagaggg 1531725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 3 - 199
Target Start/End: Original strand, 9528955 - 9529151
Alignment:
Q  3 cacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtgatt 102  Q
    ||||||||||||||||||||||| | | ||||||| || |||||||||||| ||||||||||||||||||||| ||        ||||||||||||||||    
T  9528955 cacacttagatgatgaaatcacaaagaaaaaaaacataaatctatgtgaaaatcacttatttagattgaaataaagagaaaaagataaagaggggtgatt 9529054  T
Q  103 tcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggaga 199  Q
    |||||||||||||||||| ||||||| ||| || ||||||||    | |||||||| || ||||| |||| ||||| || |||||||||||||||||    
T  9529055 tcaggtcaagaattgacccaaaaccacccctcagtgaagaaactgtaagagaaaacctaaagagataaaactagggccgacttgttggagagggaga 9529151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 53616726 - 53616912
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||| ||| | | ||||||||||||||||||||||| ||||||||||||||||||||| ||        || ||||| |||||    
T  53616726 accacacttagatgatgaaattacaaagaaaaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaacgatgaagagtggtga 53616825  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgt 187  Q
    |||||||||||||||||||| |||  || ||| ||| ||||||||   | |||||||| ||||||||||||||||||| ||||||||    
T  53616826 tttcaggtcaagaattgacccaaagtcacccctcaacgaagaaattgtaagagaaaacctagagagagaaaattagggccggcttgt 53616912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 9283924 - 9283728
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||| ||| | | ||||||||||||||||||| ||| ||||||||||||||||||||| ||        || |||||||||||    
T  9283924 accacacttagatgatgaaattacaaata-aaaaaacctagatctatgtaaaaatcacttatttagattgaaataaagagaaaacgatgaagaggggtga 9283826  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggag 198  Q
    |||||||| ||| ||||||| ||||||| ||| ||||||||||||   | |||| ||| ||||||||||||| ||||| || ||||||||||||||||    
T  9283825 tttcaggttaagtattgacccaaaaccacccctcaatgaagaaattgtaagagataacctagagagagaaaactagggccgacttgttggagagggag 9283728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 20569268 - 20569067
Alignment:
Q  1 accacacttagatgatgaaatcacaca--aagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggt 98  Q
    ||||||||||||||||||||| | | |  || ||||||||||||||||||||||| ||| ||||||||||||||||| ||        || |||||||||    
T  20569268 accacacttagatgatgaaattataaagaaaaaaaaaacctagatctatgtgaaaatcatttatttagattgaaataaagagaaaaaaatgaagaggggt 20569169  T
Q  99 gatttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggag 198  Q
    |||||||||| ||||||||||| ||||||| ||  |||||||||||| | | || ||||| ||||| ||||||| ||| | |||||||||||||||||||    
T  20569168 gatttcaggttaagaattgacccaaaaccacccatcaatgaagaaattatacgaaaaaacctagagggagaaaactagagccggcttgttggagagggag 20569069  T
Q  199 ag 200  Q
    ||    
T  20569068 ag 20569067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 9645625 - 9645816
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||||||||||||||||||| || | | ||||||||||||||||||||||| ||||||||||||||||||||||||        || |||||||||||    
T  9645625 accacacttagatgatgaaatcgcaaaga-aaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagacaaaaagatgaagaggggtga 9645723  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggaga 193  Q
    | |||||||||||||||||| ||||| | ||| |||||||||||    | || ||| | |||||| |||||| ||||| ||||||||||||||    
T  9645724 tatcaggtcaagaattgacccaaaacgacccctcaatgaagaaactgtaagataaagcctagagaaagaaaactagggccggcttgttggaga 9645816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 25273896 - 25273689
Alignment:
Q  1 accacacttagatgatgaaatcacaca--aagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagag-----nnnnnnntataaaga 93  Q
    ||||||||||||||||||||||||| |  || ||||||||||||||||||||||| ||||||||||||||||||||||||             || ||||    
T  25273896 accacacttagatgatgaaatcacaaagaaaaaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaagatgaagatgaaga 25273797  T
Q  94 ggggtgatttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggaga 193  Q
    ||||||||||||||||||||||||| | ||||||| ||| ||||| |||||    | |||||||  ||||||||||||| ||||| ||||||||||||||    
T  25273796 ggggtgatttcaggtcaagaattgatccaaaaccacccctcaatggagaaactgtaagagaaaatctagagagagaaaactagggccggcttgttggaga 25273697  T
Q  194 gggagagg 201  Q
    || |||||    
T  25273696 ggaagagg 25273689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 34024513 - 34024654
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||||| |  |||||||||||||||||||||||||| | ||||||||||||||||||||||        || |||||||||||    
T  34024513 accacacttagatgatgaaatcaaa--aagaaaaaacctagatctatgtgaaaataacttatttagattgaaatagagagaaaaagatgaagaggggtga 34024610  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaa 144  Q
    |||||||||||||||||| | ||||||| ||| |||||||||||    
T  34024611 tttcaggtcaagaattgatccaaaaccacccctcaatgaagaaa 34024654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 31381748 - 31381944
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||||||||||||||||||||||  |||||||||| ||||||||||||||| ||||||||||| ||||||| ||||        || |  ||||||||    
T  31381748 accacacttagatgatgaaatcaca--aagaaaaaacttagatctatgtgaaaatcacttatttaaattgaaaaagagagaaaaagatgagaaggggtga 31381845  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggaga 199  Q
    |||||||||||||||||||| ||||||| ||  ||| |||||||    | |||||||  ||||||||||||||||||  |||||||| | |||||||||    
T  31381846 tttcaggtcaagaattgacccaaaaccacccatcaacgaagaaaccgtaagagaaaatctagagagagaaaattaggaccggcttgtggaagagggaga 31381944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 50766585 - 50766785
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||| ||| | | ||||||| ||||||||||||||| ||| ||||||||||||||||| ||        || ||||||| |||    
T  50766585 accacacttagatgatgaaattacaaaga-aaaaaacttagatctatgtgaaaatcatttatttagattgaaataaagagaaaaagatgaagagggatga 50766683  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaaga--aatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggag 198  Q
    |||||| ||||||||||||| ||||||| | | |||||||||  |||   | |||||||| |||||||| |||| ||||| |||||||||||||||||||    
T  50766684 tttcagatcaagaattgacccaaaaccacctctcaatgaagagaaattgtaagagaaaacctagagagaaaaaactagggccggcttgttggagagggag 50766783  T
Q  199 ag 200  Q
    ||    
T  50766784 ag 50766785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 43444406 - 43444218
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||| ||| | | ||||||||||||| ||||||||| ||||||||||||||||||||| ||        || |||| ||||||    
T  43444406 accacacttagatgatgaaattacaaaga-aaaaaacctagatatatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagatgggtga 43444308  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttgg 190  Q
    |||||| |||| |||||||| ||||| | ||| |||||||| |||   | |||||||| ||||||||||||| ||||| |||||||||||    
T  43444307 tttcagatcaaaaattgacccaaaactacccctcaatgaaggaattgtaagagaaaacctagagagagaaaactagggccggcttgttgg 43444218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 95 - 209
Target Start/End: Original strand, 5333699 - 5333811
Alignment:
Q  95 gggtgatttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagag 194  Q
    ||||||||||| ||||| |||||||| |||||||  |||||||||||||| | || |||||||| |||||||| |||||||||| |||||||||||||||    
T  5333699 gggtgatttcatgtcaaaaattgacccaaaacca--ccccaatgaagaaacgggaagagaaaacctagagagaaaaaattagggccggcttgttggagag 5333796  T
Q  195 ggagaggaagagtat 209  Q
    |||||||||||||||    
T  5333797 ggagaggaagagtat 5333811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 868175 - 867978
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaat-------agagnnnnnnntataaaga 93  Q
    |||||||||||||||||||||||||  |||||||| | ||||||||||||||| | ||||||||||||||||||       ||||        || ||||    
T  868175 accacacttagatgatgaaatcaca--aagaaaaatc-tagatctatgtgaaaataacttatttagattgaaatttgaaatagagagaaaaagatgaaga 868079  T
Q  94 ggggtgatttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggaga 193  Q
    |||||||||||| ||||||||| |||||||||||| ||| |||||||||||   || |||||||| ||||||||||||| ||||| |||||| |||||||    
T  868078 ggggtgatttcatgtcaagaatcgacctaaaaccacccctcaatgaagaaactggaagagaaaacctagagagagaaaactagggccggctttttggaga 867979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 38706786 - 38706928
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||||||| | | |||||||||| |||||||||||| ||||||||||||||||||||||||        || |||| ||||||    
T  38706786 accacacttagatgatgaaatcacaaaga-aaaaaacctaaatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagaagggtga 38706884  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaa 144  Q
    ||| || ||||||||||||| ||||||| ||| |||||||||||    
T  38706885 ttttagatcaagaattgacccaaaaccacccctcaatgaagaaa 38706928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 4643871 - 4643683
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaaga--ggggt 98  Q
    ||||||||||||||||||||||||| | | |||||| |||||||||||||||| ||||||||||||||||||||||||        || ||||  |||||    
T  4643871 accacacttagatgatgaaatcacaaagaaaaaaaatctagatctatgtgaaa-tcacttatttagattgaaatagagagaaaaagatgaagaggggggt 4643773  T
Q  99 gatttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgtt 188  Q
    ||||||||||||| |||| ||||||||||| ||| ||||||||| |    | |||||||| |||| |||||||| ||||| || ||||||    
T  4643772 gatttcaggtcaaaaattcacctaaaaccacccctcaatgaagagactgtaagagaaaacctagaaagagaaaactagggccgacttgtt 4643683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 10359623 - 10359821
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||||||   |||||||||||||||| ||||| ||| |||||||||||||| |||||||||        || |||  ||||||    
T  10359623 accacacttagatgatgaaatcacg--aagaaaaaacctagatatatgttaaaatcacttatttagatcgaaatagagagaaaaagatgaagttgggtga 10359720  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccc-caatgaagaaa-tgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggag 198  Q
    ||||||||||| |||||||| ||||||| |||| ||||||||||| ||| | |||||||  |||||||| ||||||| || |  ||||||||||||||||    
T  10359721 tttcaggtcaaaaattgacccaaaaccaccccctcaatgaagaaactga-aagagaaaatctagagagaaaaaattaaggccatcttgttggagagggag 10359819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 51317998 - 51317856
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||||| |  |||||||||||||||||||||||||| ||||||||||||||||||||||||        || |||| | ||||    
T  51317998 accacacttagatgatgaaatcaaa--aagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagatgagtga 51317901  T
Q  101 tttcaggtc-aagaattgacctaaaaccatcccccaatgaagaaa 144  Q
    ||||||||| ||||||||||| |||| || ||| |||||||||||    
T  51317900 tttcaggtcaaagaattgacccaaaatcacccctcaatgaagaaa 51317856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 172
Target Start/End: Complemental strand, 21090158 - 21089995
Alignment:
Q  8 ttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtgatttcagg 107  Q
    |||||||||||||||||   ||||||||||||| |||||||||||| ||||||||||| ||||||||||||        || |||| | ||||||||||     
T  21090158 ttagatgatgaaatcacg--aagaaaaaacctaaatctatgtgaaaatcacttatttatattgaaatagagagaaaaagatgaagatgagtgatttcaga 21090061  T
Q  108 tcaagaattgacctaaaaccatcccc-caatgaagaaatgagatgagaaaacttagagagagaaaa 172  Q
    ||||  ||||||| ||||||| |||| |||||||||||  ||| |||||||| |||||||||||||    
T  21090060 tcaaagattgacccaaaaccaccccctcaatgaagaaactagaagagaaaacctagagagagaaaa 21089995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 201
Target Start/End: Original strand, 43154126 - 43154295
Alignment:
Q  31 aaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtgatttcaggtcaagaattgacctaaaaccatc 130  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||        || |||||||||||||||| |||||||||||||| ||||||| |    
T  43154126 aaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaag-atgaagaggggtgatttcaagtcaagaattgacccaaaaccacc 43154224  T
Q  131 ccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggagagg 201  Q
     | ||||| | ||||   | || ||||| || |||||||||| ||||| |  |||||||||| ||||||||    
T  43154225 tctcaatggataaattgtaagataaaacctaaagagagaaaactagggccaacttgttggagcgggagagg 43154295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 197
Target Start/End: Complemental strand, 47416868 - 47416703
Alignment:
Q  31 aaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtgatttcaggtcaagaattgacctaaaaccatc 130  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||| ||        || |||||||||||||||| ||||| |||||||| |||| || |    
T  47416868 aaaaaacttagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttcaagtcaataattgacccaaaatcacc 47416769  T
Q  131 ccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagaggga 197  Q
    || ||||||||||||   | |||||||| ||||  || |||| |||||||| |||||||||||||||    
T  47416768 cctcaatgaagaaattgtaagagaaaacctaga-tgaaaaaactagggtcgacttgttggagaggga 47416703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 37188670 - 37188851
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||||||| ||||||||||||||  |||||||||| ||||| ||||||||| ||||||||||||||||||||| ||        || |||| | ||||    
T  37188670 accacacttaaatgatgaaatcaca--aagaaaaaac-tagatatatgtgaaaatcacttatttagattgaaatatagagaaaaagatgaagatgagtga 37188766  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggctt 185  Q
    ||||||||||| |||||||| |||||||  || | ||||| ||   ||| |||||||| ||||||||||||| ||||| ||||||    
T  37188767 tttcaggtcaataattgacccaaaaccactcctcgatgaaaaatctagaagagaaaacctagagagagaaaactagggccggctt 37188851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 2115663 - 2115807
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    ||||||||||||||||||||| ||| | | |||||||||| |||||||||||| ||||||||||||||||||||| ||        || ||||   ||||    
T  2115663 accacacttagatgatgaaattacaaagaaaaaaaacctaaatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaaaagtga 2115762  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaat 145  Q
    ||||||||||| |||||||| ||||||| ||| ||||||| ||||    
T  2115763 tttcaggtcaataattgacccaaaaccacccctcaatgaataaat 2115807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 8009437 - 8009511
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagag 78  Q
    |||||||||||||||||||||||||  |||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  8009437 accacacttagatgatgaaatcaca--aagaaaaaac-tagatctatgtgaaaatcacttatttagattgaaatagag 8009511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 29965648 - 29965574
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaata 75  Q
    ||||||||||||||||||||| ||| | | ||||||||||||||||||||||| |||||||||||||||||||||    
T  29965648 accacacttagatgatgaaattacaaagaaaaaaaacctagatctatgtgaaaatcacttatttagattgaaata 29965574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 44947425 - 44947216
Alignment:
Q  1 accacacttagatgatgaaatcacaca--aagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggg-- 96  Q
    ||||||||||||| ||||||||||| |  || |||||||||||||||||| |||| ||||||||||||||||| | ||||        | | |||| |      
T  44947425 accacacttagataatgaaatcacaaagaaaaaaaaaacctagatctatgcgaaaatcacttatttagattgagagagagagagagagagagagagagag 44947326  T
Q  97 ----gtgatttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggag 192  Q
        |||||||||||||||||||||||| ||||||| ||| |||||||||||    | |||||||||||||||||||||| ||||  || |||||| ||     
T  44947325 agaggtgatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaactgtaagagaaaacttagagagagaaaactaggaccgacttgttcgaa 44947226  T
Q  193 agggagagga 202  Q
    |||| |||||    
T  44947225 agggcgagga 44947216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 143
Target Start/End: Original strand, 35965079 - 35965192
Alignment:
Q  31 aaaaaacctagatctatgtg-aaattcacttatttagattgaaatagagnnnnnnntataaagaggggtgatttcaggtcaagaattgacctaaaaccat 129  Q
    |||||||||||||||||||| ||| ||||||||| ||||||||||||||        || ||||| ||||||||||||| || |||||||| |||||||     
T  35965079 aaaaaacctagatctatgtgaaaaatcacttattcagattgaaatagagagaaaaagatgaagagaggtgatttcaggtaaaaaattgacccaaaaccac 35965178  T
Q  130 cccccaatgaagaa 143  Q
    ||| ||||||||||    
T  35965179 ccctcaatgaagaa 35965192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 194
Target Start/End: Complemental strand, 2624482 - 2624318
Alignment:
Q  31 aaaaaacctagatctatgtgaaattcacttatttagattgaaataga-gnnnnnnntataaagaggggtgatttcaggtcaagaattgacctaaaaccat 129  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||          || | || | || |||||||||||| |||  ||| |||| ||     
T  2624482 aaaaaacctagatctatgtgaaaatcacttatttagattgaaatagactataaaaagatgatgatgagttatttcaggtcaaaaatcaacccaaaatcac 2624383  T
Q  130 cccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagag 194  Q
    ||| |||| ||||||  ||| |||||||| |||||||| |||| ||||| |||||||||||||||    
T  2624382 ccctcaataaagaaactagaagagaaaacctagagagaaaaaactagggccggcttgttggagag 2624318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 167
Target Start/End: Complemental strand, 12265438 - 12265302
Alignment:
Q  33 aaaacctagatctatgtgaaat-tcacttatttagattgaaatagagnnnnnnntataaagaggggtgatttcaggtcaagaattgacctaaaaccatcc 131  Q
    |||||||||||||||||||||  |||||||||||||||||||||| |        || |||||||||||||||||||||| |||||||| |||| || ||    
T  12265438 aaaacctagatctatgtgaaaaatcacttatttagattgaaatagggataaaaagatgaagaggggtgatttcaggtcaaaaattgaccaaaaatcaccc 12265339  T
Q  132 cc-caatgaagaaatgagatgagaaaacttagagaga 167  Q
    ||  ||||||||||   || |||||||| ||||||||    
T  12265338 ccttaatgaagaaaattgaagagaaaacctagagaga 12265302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 35261204 - 35261132
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaata 75  Q
    |||||||||||||||| |||||||   ||||||||||||| |||||||||||| |||||||||||||||| ||||    
T  35261204 accacacttagatgatcaaatcacg--aagaaaaaacctaaatctatgtgaaaatcacttatttagattgcaata 35261132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 14183816 - 14183740
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagag 78  Q
    |||||||||||||| |||||||||| | | ||||||| ||||||  ||||||| ||||||||||||||||||||||||    
T  14183816 accacacttagatggtgaaatcacaaaga-aaaaaacttagatccttgtgaaaatcacttatttagattgaaatagag 14183740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 140
Target Start/End: Original strand, 18139014 - 18139127
Alignment:
Q  28 aagaaaaaacctagatctatgtgaaat-tcacttatttagattgaaatagagnnnnnnntataaagaggggtgatttcaggtcaagaattgacctaaaac 126  Q
    |||||||||||||||| |||||||||  ||||||||||||||||||||||||        || |||||| |||||| |||||||| |||| ||||||||     
T  18139014 aagaaaaaacctagatgtatgtgaaaaatcacttatttagattgaaatagagagaaaatgatgaagaggtgtgattccaggtcaaaaatttacctaaaat 18139113  T
Q  127 catcccccaatgaa 140  Q
    || ||| |||||||    
T  18139114 cacccctcaatgaa 18139127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 140
Target Start/End: Original strand, 49126227 - 49126340
Alignment:
Q  28 aagaaaaaacctagatctatgtgaaat-tcacttatttagattgaaatagagnnnnnnntataaagaggggtgatttcaggtcaagaattgacctaaaac 126  Q
    |||||||||||||||| |||||||||  ||||||||||||||||||||||||        || |||||| |||||| |||||||| |||| ||||||||     
T  49126227 aagaaaaaacctagatgtatgtgaaaaatcacttatttagattgaaatagagagaaaatgatgaagaggtgtgattccaggtcaaaaatttacctaaaat 49126326  T
Q  127 catcccccaatgaa 140  Q
    || ||| |||||||    
T  49126327 cacccctcaatgaa 49126340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 49680554 - 49680477
Alignment:
Q  1 accacacttagatgatgaaatcacaca---aagaaaaaacctagatctatgtgaaattcacttatttagattgaaata 75  Q
    ||||||||||||||||||||| ||| |   || |||||||||||||| |||||||| |||||||||| ||||||||||    
T  49680554 accacacttagatgatgaaattacaaagaaaaaaaaaaacctagatccatgtgaaaatcacttatttggattgaaata 49680477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 1931795 - 1931856
Alignment:
Q  4 acacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttaga 67  Q
    ||||||||||||||||||||||  | |||||||||||||||| ||||||| | |||||||||||    
T  1931795 acacttagatgatgaaatcaca--atgaaaaaacctagatctttgtgaaaataacttatttaga 1931856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 32952826 - 32952898
Alignment:
Q  3 cacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagag 78  Q
    ||||||||||||| |||||||||  |||||||||| |||||||||||||||  ||||||||||  |||||||||||    
T  32952826 cacacttagatgacgaaatcaca--aagaaaaaac-tagatctatgtgaaaaacacttatttaatttgaaatagag 32952898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 188
Target Start/End: Original strand, 27593952 - 27594098
Alignment:
Q  40 agatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtgatttcaggtcaagaattgacctaaaaccatcccccaatga 139  Q
    |||||||||||||| || |||||||||||||||||| ||        || ||||||| |||||||| ||||| ||||||||||||| || ||  ||||||    
T  27593952 agatctatgtgaaactcgcttatttagattgaaatatagagaaaaagatgaagaggg-tgatttcatgtcaaaaattgacctaaaatcacccatcaatga 27594050  T
Q  140 agaaatgagatgagaaaacttagagagagaaaattagggtcggcttgtt 188  Q
    |||| || || |||||||| |||||||  |||| ||||| ||| |||||    
T  27594051 agaagtg-gaagagaaaacctagagaggaaaaactagggccggtttgtt 27594098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 197
Target Start/End: Complemental strand, 29965568 - 29965493
Alignment:
Q  122 aaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagaggga 197  Q
    ||||||| ||| ||||||| ||||   | |||||||| ||||||||||||||||||| || |||||||||||||||    
T  29965568 aaaaccacccctcaatgaaaaaattgtaagagaaaacctagagagagaaaattagggccgacttgttggagaggga 29965493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 78
Target Start/End: Original strand, 46991235 - 46991282
Alignment:
Q  31 aaaaaacctagatctatgtgaaattcacttatttagattgaaatagag 78  Q
    |||||| |||||||||||||||| ||||| ||||||||||||||||||    
T  46991235 aaaaaatctagatctatgtgaaaatcactcatttagattgaaatagag 46991282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 35351263 - 35351309
Alignment:
Q  29 agaaaaaacctagatctatgtgaaattcacttatttagattgaaata 75  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||||    
T  35351263 agaaaaaacctagatctatgtgaatatcacttatttaaattgaaata 35351309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 100 - 167
Target Start/End: Complemental strand, 35261102 - 35261036
Alignment:
Q  100 atttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagaga 167  Q
    |||||||||||| |||||||| |||| || ||| ||||||||||| |||| |||||||| ||||||||    
T  35261102 atttcaggtcaaaaattgacccaaaatca-ccctcaatgaagaaacgagaagagaaaacctagagaga 35261036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 188
Target Start/End: Complemental strand, 50179689 - 50179598
Alignment:
Q  97 gtgatttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgtt 188  Q
    |||||||||||| ||||||||||| ||||||| ||| ||||| |||||    | |||||||  ||||||||||||| || ||||| ||||||    
T  50179689 gtgatttcaggttaagaattgacccaaaaccacccctcaatggagaaactgtaagagaaaagctagagagagaaaactatggtcgacttgtt 50179598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 1008282 - 1008232
Alignment:
Q  28 aagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagag 78  Q
    ||||||||| ||| || ||||||||| ||||||||||||||| ||||||||    
T  1008282 aagaaaaaaactaaatttatgtgaaaatcacttatttagattaaaatagag 1008232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 200
Target Start/End: Original strand, 3338887 - 3338924
Alignment:
Q  163 agagagaaaattagggtcggcttgttggagagggagag 200  Q
    ||||| |||| |||||||||||||||||||||||||||    
T  3338887 agagaaaaaactagggtcggcttgttggagagggagag 3338924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 78
Target Start/End: Complemental strand, 21405486 - 21405450
Alignment:
Q  42 atctatgtgaaattcacttatttagattgaaatagag 78  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  21405486 atctatgtgaaaatcacttaattagattgaaatagag 21405450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 26123248 - 26123200
Alignment:
Q  30 gaaaaaacctagatctatgtgaaattcacttatttagattgaaatagag 78  Q
    |||||||||||| ||||||  ||| ||||||||||| ||||||||||||    
T  26123248 gaaaaaacctaggtctatgaaaaactcacttatttaaattgaaatagag 26123200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 49072858 - 49072906
Alignment:
Q  27 aaagaaaaaacctagatctatgtgaaattcacttatttagattgaaata 75  Q
    ||||||||||  || |||||||||||| |||||||| ||||||||||||    
T  49072858 aaagaaaaaatataaatctatgtgaaaatcacttatatagattgaaata 49072906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 8720 - 8579
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||        || || ||||||||    
T  8720 accacacttagatgatgaaatcaca--aagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagataaaaagatgaaaaggggtga 8623  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaa 144  Q
    ||||| || ||||||| ||| ||||||| ||| |||||||||||    
T  8622 tttcaagttaagaattaacccaaaaccacccctcaatgaagaaa 8579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 194
Target Start/End: Complemental strand, 5397 - 5212
Alignment:
Q  3 cacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtgatt 102  Q
    |||||||| |||||||||||||| | | ||||||| ||||| ||||| ||| |||||||||||||||||| |||||        || |||||||||||||    
T  5397 cacacttaaatgatgaaatcacaaaga-aaaaaacatagatatatgtaaaagtcacttatttagattgaagtagagagagaaagatgaagaggggtgatt 5299  T
Q  103 tcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagag 194  Q
    |||||||||||||||||| ||||||| ||||||||||||||| | || |||||||| |    |||||| ||||||| |||||||||||||||    
T  5298 tcaggtcaagaattgacccaaaacca-cccccaatgaagaaacgggaagagaaaacct----agagaagattagggccggcttgttggagag 5212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 46 - 202
Target Start/End: Complemental strand, 6295 - 6140
Alignment:
Q  46 atgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtgatttcaggtcaagaattgacctaaaaccatcccccaatgaagaaat 145  Q
    |||||||| |||||||||||||||| |||||||        || |||||||||||||| ||||||||||||||||| |||||| ||| |||||||||||     
T  6295 atgtgaaaatcacttatttagattggaatagagaaaaaaagatgaagaggggtgattttaggtcaagaattgacctgaaacca-ccctcaatgaagaaac 6197  T
Q  146 gagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggagagga 202  Q
      || |||||||| || |||||||||||||||| |||||| ||||||||||||||||    
T  6196 tggaagagaaaacctaaagagagaaaattagggccggcttattggagagggagagga 6140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 16396 - 16529
Alignment:
Q  1 accacacttagatgatgaaatcacaca-aagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtg 99  Q
    ||||||||||||||||||||||||| | || |||||||||| |||||||||||| ||||||||||||||||||||||||        || |||| |  ||    
T  16396 accacacttagatgatgaaatcacaaagaaaaaaaaacctaaatctatgtgaaaatcacttatttagattgaaatagagagaaacagatgaagatgaatg 16495  T
Q  100 atttcaggtcaagaattgacctaaaaccatcccc 133  Q
    |||| |||||||||||||||||| ||||| ||||    
T  16496 attttaggtcaagaattgacctagaaccaccccc 16529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 201450 - 201520
Alignment:
Q  3 cacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaata 75  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||||||| |||||||||||||||||||||    
T  201450 cacacttagatgatgaaatcaca--aagaaaaaatctagatctatgtgaaaatcacttatttagattgaaata 201520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 361875 - 362067
Alignment:
Q  1 accacacttagatgatgaaatcacacaaagaaaaaacctagatctatgtgaaattcacttatttagattgaaatagagnnnnnnntataaagaggggtga 100  Q
    |||| ||||| |||||||||||||| |||    |||||||  ||||||||||| | ||||||||||||||||||||||        ||  ||||||||||    
T  361875 accatacttaaatgatgaaatcacaaaaa----aaacctaactctatgtgaaaattacttatttagattgaaatagagaaaaag--atggagaggggtga 361968  T
Q  101 tttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgttggagagggaga 199  Q
    |||||||||||||||||||  ||||||| ||| |||||||||||    | |||||||| || |||||||||| || || |||||||||| || ||||||    
T  361969 tttcaggtcaagaattgactcaaaaccacccctcaatgaagaaactgtaagagaaaacctaaagagagaaaactaaggccggcttgttgaagggggaga 362067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 188
Target Start/End: Complemental strand, 148 - 57
Alignment:
Q  97 gtgatttcaggtcaagaattgacctaaaaccatcccccaatgaagaaatgagatgagaaaacttagagagagaaaattagggtcggcttgtt 188  Q
    |||||||||||| ||||||||||| ||||||| ||| ||||| |||||    | |||||||  ||||||||||||| || ||||| ||||||    
T  148 gtgatttcaggttaagaattgacccaaaaccacccctcaatggagaaactgtaagagaaaagctagagagagaaaactatggtcgacttgtt 57  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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