View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8589_low_11 (Length: 205)

Name: NF8589_low_11
Description: NF8589
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8589_low_11
NF8589_low_11
[»] chr8 (19 HSPs)
chr8 (14-190)||(21942698-21942874)
chr8 (14-179)||(22368762-22368927)
chr8 (43-179)||(11348221-11348357)
chr8 (37-180)||(19766301-19766444)
chr8 (14-144)||(22289865-22289995)
chr8 (14-110)||(8313342-8313438)
chr8 (14-110)||(8324095-8324191)
chr8 (14-110)||(22100869-22100965)
chr8 (37-180)||(29333414-29333557)
chr8 (14-110)||(21380967-21381063)
chr8 (63-183)||(22830703-22830823)
chr8 (36-180)||(21826189-21826333)
chr8 (14-110)||(21954953-21955049)
chr8 (14-110)||(22034774-22034870)
chr8 (14-110)||(22098097-22098193)
chr8 (14-110)||(16419844-16419940)
chr8 (14-176)||(21100057-21100219)
chr8 (130-173)||(22034878-22034921)
chr8 (39-143)||(20001152-20001256)
[»] chr6 (16 HSPs)
chr6 (18-190)||(18447002-18447174)
chr6 (14-110)||(24856488-24856584)
chr6 (37-180)||(21561717-21561860)
chr6 (15-115)||(25966513-25966613)
chr6 (37-180)||(11218413-11218556)
chr6 (35-110)||(18010720-18010795)
chr6 (39-97)||(23519007-23519065)
chr6 (39-180)||(20017509-20017650)
chr6 (39-180)||(22166824-22166965)
chr6 (39-97)||(29685451-29685509)
chr6 (39-86)||(22768399-22768446)
chr6 (14-89)||(30672990-30673065)
chr6 (130-179)||(8725349-8725398)
chr6 (39-104)||(20169113-20169178)
chr6 (145-176)||(21561852-21561883)
chr6 (39-97)||(19586843-19586901)
[»] scaffold0037 (2 HSPs)
scaffold0037 (14-190)||(44228-44404)
scaffold0037 (14-190)||(51617-51793)
[»] chr2 (28 HSPs)
chr2 (14-143)||(26192866-26192995)
chr2 (35-179)||(17867315-17867459)
chr2 (14-110)||(22045904-22046000)
chr2 (14-110)||(25356386-25356482)
chr2 (14-110)||(27626468-27626564)
chr2 (14-149)||(25368865-25369000)
chr2 (81-184)||(25372275-25372378)
chr2 (14-110)||(12858-12954)
chr2 (36-180)||(116309-116452)
chr2 (39-180)||(27630311-27630452)
chr2 (39-180)||(23160644-23160785)
chr2 (39-180)||(23571901-23572042)
chr2 (36-86)||(27770067-27770117)
chr2 (39-180)||(16774461-16774602)
chr2 (39-180)||(24796564-24796705)
chr2 (99-180)||(24821413-24821494)
chr2 (14-110)||(24170208-24170304)
chr2 (35-110)||(25146056-25146131)
chr2 (14-66)||(25372229-25372281)
chr2 (130-173)||(12962-13005)
chr2 (130-173)||(22046008-22046051)
chr2 (35-74)||(24821368-24821407)
chr2 (145-176)||(24821486-24821517)
chr2 (130-173)||(25356335-25356378)
chr2 (39-96)||(25339371-25339428)
chr2 (145-173)||(23160777-23160805)
chr2 (145-173)||(23572034-23572062)
chr2 (145-173)||(27630291-27630319)
[»] chr7 (24 HSPs)
chr7 (35-179)||(15064566-15064710)
chr7 (35-179)||(824432-824576)
chr7 (14-183)||(20107077-20107246)
chr7 (14-110)||(8716738-8716834)
chr7 (14-110)||(18286499-18286595)
chr7 (35-118)||(15918034-15918117)
chr7 (14-115)||(16466859-16466960)
chr7 (14-110)||(14549970-14550066)
chr7 (37-180)||(16150770-16150913)
chr7 (37-180)||(16530848-16530991)
chr7 (37-180)||(16634671-16634814)
chr7 (16-110)||(48803105-48803199)
chr7 (14-110)||(13656807-13656903)
chr7 (14-180)||(13672661-13672827)
chr7 (113-179)||(15921335-15921401)
chr7 (37-110)||(16761058-16761131)
chr7 (39-180)||(18594538-18594679)
chr7 (39-180)||(18617005-18617146)
chr7 (39-122)||(5396003-5396086)
chr7 (130-173)||(8716687-8716730)
chr7 (39-122)||(13741296-13741379)
chr7 (130-173)||(14549919-14549962)
chr7 (132-173)||(48803209-48803250)
chr7 (39-95)||(8783357-8783413)
[»] scaffold0026 (2 HSPs)
scaffold0026 (35-180)||(132431-132576)
scaffold0026 (39-122)||(17232-17315)
[»] chr3 (27 HSPs)
chr3 (14-180)||(13693683-13693849)
chr3 (14-181)||(17386560-17386726)
chr3 (15-184)||(3278270-3278439)
chr3 (37-180)||(20157720-20157863)
chr3 (36-180)||(13505781-13505925)
chr3 (14-110)||(7599230-7599326)
chr3 (14-110)||(16374723-16374819)
chr3 (36-179)||(15945420-15945563)
chr3 (35-182)||(14446830-14446974)
chr3 (36-180)||(3340485-3340629)
chr3 (14-110)||(10145885-10145981)
chr3 (14-110)||(13137413-13137509)
chr3 (14-110)||(13188661-13188757)
chr3 (37-180)||(12161331-12161474)
chr3 (35-110)||(15630221-15630296)
chr3 (14-110)||(12188319-12188415)
chr3 (35-110)||(13196694-13196769)
chr3 (14-110)||(12194733-12194829)
chr3 (14-110)||(13689541-13689637)
chr3 (37-176)||(4369482-4369621)
chr3 (37-180)||(16654521-16654664)
chr3 (37-180)||(22165571-22165714)
chr3 (37-180)||(10603800-10603943)
chr3 (39-105)||(10161457-10161523)
chr3 (39-105)||(15643958-15644024)
chr3 (130-173)||(7599179-7599222)
chr3 (145-176)||(12161466-12161497)
[»] scaffold1095 (1 HSPs)
scaffold1095 (14-180)||(2080-2246)
[»] scaffold0156 (1 HSPs)
scaffold0156 (14-180)||(7738-7904)
[»] scaffold0346 (1 HSPs)
scaffold0346 (14-180)||(4835-5001)
[»] chr5 (22 HSPs)
chr5 (35-176)||(21387115-21387256)
chr5 (37-180)||(26846471-26846614)
chr5 (36-180)||(30760908-30761052)
chr5 (14-176)||(22947239-22947401)
chr5 (36-180)||(20439430-20439574)
chr5 (14-110)||(25008027-25008123)
chr5 (14-110)||(15734408-15734504)
chr5 (14-110)||(20621037-20621133)
chr5 (14-110)||(23746925-23747021)
chr5 (14-110)||(22318728-22318824)
chr5 (36-180)||(25117412-25117556)
chr5 (36-180)||(25176503-25176647)
chr5 (37-180)||(18071715-18071858)
chr5 (37-180)||(20792050-20792193)
chr5 (39-105)||(24954446-24954512)
chr5 (130-173)||(15734357-15734400)
chr5 (39-122)||(18487319-18487402)
chr5 (39-122)||(22828015-22828098)
chr5 (130-173)||(23746874-23746917)
chr5 (39-122)||(24939405-24939488)
chr5 (39-97)||(21282166-21282224)
chr5 (130-179)||(22318832-22318881)
[»] chr1 (10 HSPs)
chr1 (14-181)||(8651828-8651994)
chr1 (39-173)||(19876943-19877077)
chr1 (14-106)||(20236359-20236451)
chr1 (36-180)||(20392296-20392440)
chr1 (43-179)||(20072205-20072341)
chr1 (37-116)||(3988956-3989035)
chr1 (39-105)||(21799943-21800009)
chr1 (14-83)||(8948796-8948865)
chr1 (145-176)||(19783814-19783845)
chr1 (39-122)||(21785699-21785782)
[»] chr4 (9 HSPs)
chr4 (14-182)||(15864307-15864475)
chr4 (36-180)||(15261352-15261496)
chr4 (14-110)||(22109834-22109930)
chr4 (14-110)||(15253219-15253316)
chr4 (37-180)||(3353427-3353564)
chr4 (39-180)||(13821713-13821854)
chr4 (39-143)||(15349100-15349204)
chr4 (39-122)||(11497869-11497952)
chr4 (39-122)||(18290895-18290978)
[»] scaffold0402 (1 HSPs)
scaffold0402 (14-183)||(6687-6856)
[»] scaffold0146 (1 HSPs)
scaffold0146 (37-180)||(21686-21829)
[»] scaffold1571 (1 HSPs)
scaffold1571 (14-110)||(1496-1592)
[»] scaffold0577 (2 HSPs)
scaffold0577 (14-110)||(4980-5076)
scaffold0577 (130-173)||(4929-4972)
[»] scaffold0525 (1 HSPs)
scaffold0525 (37-180)||(943-1087)
[»] scaffold0216 (2 HSPs)
scaffold0216 (35-110)||(10291-10366)
scaffold0216 (130-176)||(10237-10283)
[»] scaffold0375 (2 HSPs)
scaffold0375 (14-110)||(11403-11499)
scaffold0375 (132-176)||(11349-11393)
[»] scaffold0142 (1 HSPs)
scaffold0142 (37-180)||(22260-22403)
[»] scaffold0051 (1 HSPs)
scaffold0051 (38-180)||(25655-25797)
[»] scaffold0974 (1 HSPs)
scaffold0974 (14-107)||(1-94)
[»] scaffold0078 (1 HSPs)
scaffold0078 (36-116)||(29362-29442)
[»] scaffold0022 (1 HSPs)
scaffold0022 (36-180)||(24374-24518)
[»] scaffold0004 (2 HSPs)
scaffold0004 (37-173)||(19242-19378)
scaffold0004 (14-82)||(253129-253197)
[»] scaffold0473 (2 HSPs)
scaffold0473 (35-110)||(12912-12987)
scaffold0473 (130-179)||(12855-12904)
[»] scaffold0230 (1 HSPs)
scaffold0230 (37-180)||(12285-12428)
[»] scaffold0231 (1 HSPs)
scaffold0231 (39-111)||(21791-21863)
[»] scaffold0117 (2 HSPs)
scaffold0117 (14-110)||(32822-32917)
scaffold0117 (132-173)||(32927-32968)
[»] scaffold0020 (2 HSPs)
scaffold0020 (14-110)||(115521-115616)
scaffold0020 (14-110)||(119825-119920)
[»] scaffold0506 (2 HSPs)
scaffold0506 (37-116)||(3323-3402)
scaffold0506 (145-176)||(3443-3474)
[»] scaffold0032 (1 HSPs)
scaffold0032 (37-180)||(90088-90231)
[»] scaffold0029 (1 HSPs)
scaffold0029 (37-180)||(122176-122319)
[»] scaffold1620 (1 HSPs)
scaffold1620 (46-110)||(271-335)
[»] scaffold0116 (1 HSPs)
scaffold0116 (43-110)||(39013-39080)
[»] scaffold1879 (1 HSPs)
scaffold1879 (35-110)||(187-262)
[»] scaffold0018 (3 HSPs)
scaffold0018 (99-180)||(19579-19660)
scaffold0018 (35-74)||(19534-19573)
scaffold0018 (145-176)||(19652-19683)
[»] scaffold0215 (1 HSPs)
scaffold0215 (14-176)||(8228-8391)
[»] scaffold0566 (1 HSPs)
scaffold0566 (39-122)||(1482-1565)
[»] scaffold0012 (2 HSPs)
scaffold0012 (39-122)||(8528-8611)
scaffold0012 (39-122)||(12700-12783)
[»] scaffold0273 (1 HSPs)
scaffold0273 (132-180)||(24161-24209)
[»] scaffold0035 (1 HSPs)
scaffold0035 (39-143)||(51803-51907)


Alignment Details
Target: chr8 (Bit Score: 161; Significance: 5e-86; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 14 - 190
Target Start/End: Original strand, 21942698 - 21942874
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatc 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21942698 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatc 21942797  T
Q  114 attgtttcctccagttttatggtcatggtgctcctcttcttggtgcaagtgtgcaccttcctcttctccaatgatgt 190  Q
    |||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  21942798 attgtttcctccggtttcatggtcatggtgctcctcctcttggtgcaagtgtgcaccttcctcttctccaataatgt 21942874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 14 - 179
Target Start/End: Complemental strand, 22368927 - 22368762
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatc 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22368927 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcatatcctttcaacctcggtttgcatccatgtccatctttcattatc 22368828  T
Q  114 attgtttcctccagttttatggtcatggtgctcctcttcttggtgcaagtgtgcaccttcctcttc 179  Q
    |||||||||| | |||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  22368827 attgtttcctacggtttcatggtcatggtgatcctcttcttggtgcaagtgtgcaccttcctcttc 22368762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 43 - 179
Target Start/End: Original strand, 11348221 - 11348357
Alignment:
Q  43 acaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatggtcatggt 142  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  11348221 acaccttgccttagttgctcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccggtttcatggtcatggt 11348320  T
Q  143 gctcctcttcttggtgcaagtgtgcaccttcctcttc 179  Q
    | |||||||||||||||||||||||||||||||||||    
T  11348321 gatcctcttcttggtgcaagtgtgcaccttcctcttc 11348357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 37 - 180
Target Start/End: Complemental strand, 19766444 - 19766301
Alignment:
Q  37 aattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatggt 136  Q
    ||||||||||||||||||| || ||||||||||||| | || ||||| ||||||||||||| ||||||| |||| |||||| || |||| |  | |||||    
T  19766444 aattcaacaccttgccttttttgctcggtgcttatcttctcgacctctgtttgcatccatgcccatcttgcattttcattggtttctccggcatcatggt 19766345  T
Q  137 catggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    ||||||||||||| || |||||||| ||||||||||||||||||    
T  19766344 catggtgctcctcatcatggtgcaattgtgcaccttcctcttct 19766301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 14 - 144
Target Start/End: Complemental strand, 22289995 - 22289865
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatc 113  Q
    ||||||||||||  |||||  ||||||||||| |||||||||||| ||||||||||||||| |||||||| |||||||| |||| |||||||||||| ||    
T  22289995 ggacatcatttcttagcccggataattcaacatcttgcctttgttgctcggtgcttatcctctcaacctcagtttgcattcatgcccatctttcattttc 22289896  T
Q  114 attgtttcctccagttttatggtcatggtgc 144  Q
    |||| ||||||| |  | |||||||||||||    
T  22289895 attgcttcctccggcatcatggtcatggtgc 22289865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 8313438 - 8313342
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    ||||||||||||  |||||  |||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  8313438 ggacatcatttcttagcccagataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatctttcatt 8313342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 8324095 - 8324191
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    ||||||||||||  |||||  |||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  8324095 ggacatcatttcttagcccagataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatctttcatt 8324191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 22100869 - 22100965
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    ||||||||||||  |||||  |||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  22100869 ggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatctttcatt 22100965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 37 - 180
Target Start/End: Complemental strand, 29333557 - 29333414
Alignment:
Q  37 aattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatggt 136  Q
    |||||||||| |||| || ||| ||||||||||||||| || |||||||| |||||||||| ||||||| |||| |||||| || |||| |  | |||||    
T  29333557 aattcaacactttgcgttagttgctcggtgcttatcctctcgacctcggtatgcatccatgcccatcttgcattttcattggtttctcctgcatcatggt 29333458  T
Q  137 catggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    |||||||||| || || |||||||| ||||||||||||||||||    
T  29333457 catggtgctcttcatcatggtgcaattgtgcaccttcctcttct 29333414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 21381063 - 21380967
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    ||||||||||||  |||||  ||||||| |||||||||||||||| |||||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  21381063 ggacatcatttcttagcccagataattcgacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatctttcatt 21380967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 63 - 183
Target Start/End: Complemental strand, 22830823 - 22830703
Alignment:
Q  63 ggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatggtcatggtgctcctcttcttggtgcaag 162  Q
    |||||||||||| |||||||| || |  ||||||| |||||||||||| |||||| ||||||| |  | || ||||||||||||||| || |||||||||    
T  22830823 ggtgcttatcctctcaacctcagtgtttatccatgcccatctttcattttcattgattcctccggcatcatagtcatggtgctcctcatcatggtgcaag 22830724  T
Q  163 tgtgcaccttcctcttctcca 183  Q
    |||||||||||||||||||||    
T  22830723 tgtgcaccttcctcttctcca 22830703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 36 - 180
Target Start/End: Complemental strand, 21826333 - 21826189
Alignment:
Q  36 taattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatgg 135  Q
    ||||||||||||||||||||||| ||||||| |||||||||| |||||||| | |||||||| ||||| | |||| |||||  || | ||    | ||||    
T  21826333 taattcaacaccttgcctttgttgctcggtggttatcctttcgacctcggtattcatccatgcccatcgtgcattttcatttgtttcaccttcatcatgg 21826234  T
Q  136 tcatggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    |||||||||||||| || |||||||  ||||||||||||||||||    
T  21826233 tcatggtgctcctcatcatggtgcatttgtgcaccttcctcttct 21826189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 21955049 - 21954953
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    ||||||||||||  |||||  |||||||||||||||| ||||||| |||||||||||||||||  ||||||||||| ||||||| ||||||||||||    
T  21955049 ggacatcatttcttagcccggataattcaacaccttgtctttgttgctcggtgcttatcctttgtacctcggtttggatccatgcccatctttcatt 21954953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 22034774 - 22034870
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    ||||||||||||  |||||  |||||||||||||||||||||||| |||||||||||| ||||  ||||||||||||||||||| | ||||||||||    
T  22034774 ggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttattctttgtacctcggtttgcatccatgccaatctttcatt 22034870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 22098193 - 22098097
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    ||||||||||||  |||||  |||||||||||||||||||||||| ||| |||||||||||||  |||||| |||||||||||| ||||||||||||    
T  22098193 ggacatcatttcttagcccggataattcaacaccttgcctttgttgctcagtgcttatcctttgtacctcgatttgcatccatgcccatctttcatt 22098097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 16419844 - 16419940
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    |||||||||| |  |||||  ||||||||||||||||||||||||  ||||||||||||||||  ||||| ||||||||||||| ||||||||||||    
T  16419844 ggacatcattccttagcccggataattcaacaccttgcctttgttgttcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt 16419940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 14 - 176
Target Start/End: Original strand, 21100057 - 21100219
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatc 113  Q
    ||||||||||||  || ||  ||||| | |||||||||||||||| ||||||| ||||||| || |||||  | || ||||||| |||||||||||| |     
T  21100057 ggacatcatttcttagtccggataatccgacaccttgcctttgttgctcggtgtttatcctctctacctcattgtgtatccatgcccatctttcattgtt 21100156  T
Q  114 attgtttcctccagttttatggtcatggtgctcctcttcttggtgcaagtgtgcaccttcctc 176  Q
    |||| |||||||    | | |||||||||||||||| | ||||||||  ||||||||||||||    
T  21100157 attgattcctccgacatcagggtcatggtgctcctcattttggtgcatttgtgcaccttcctc 21100219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 130 - 173
Target Start/End: Original strand, 22034878 - 22034921
Alignment:
Q  130 ttatggtcatggtgctcctcttcttggtgcaagtgtgcaccttc 173  Q
    |||||||||||| |||||||||| ||||||| ||||||||||||    
T  22034878 ttatggtcatggggctcctcttcatggtgcatgtgtgcaccttc 22034921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 143
Target Start/End: Complemental strand, 20001256 - 20001152
Alignment:
Q  39 ttcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatggtca 138  Q
    |||||||||||| ||||||| |||||||| | | |||| ||| | |||||||||||||| ||| | ||||| || || |||||| || | ||| || |||    
T  20001256 ttcaacaccttgtctttgttgctcggtgcatgttctttgaactttggtttgcatccatgcccaccgttcatcattatagtttccaccggctttttgttca 20001157  T
Q  139 tggtg 143  Q
    |||||    
T  20001156 tggtg 20001152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 141; Significance: 4e-74; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 18447174 - 18447002
Alignment:
Q  18 atcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattg 117  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18447174 atcatttcggagccctgataattcaacaccttgcctttgttgctcggtgcttatcctttcaacctcggtttgtatccatgtccatctttcattatcattg 18447075  T
Q  118 tttcctccagttttatggtcatggtgctcctcttcttggtgcaagtgtgcaccttcctcttctccaatgatgt 190  Q
    |||||| | |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  18447074 tttccttcggtttcatggtcatggtgctcctcctcttggtgcaagtgtgcaccttcctcttctccaataatgt 18447002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 24856488 - 24856584
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    ||||||||||||  |||||  |||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  24856488 ggacatcatttcttagcccagataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatctttcatt 24856584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 37 - 180
Target Start/End: Original strand, 21561717 - 21561860
Alignment:
Q  37 aattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatggt 136  Q
    |||||||||||||||||||||| ||||||||||||||| || |||||| | |||||||||| ||||||| |||| |||||  || |||| |  | | |||    
T  21561717 aattcaacaccttgcctttgttgctcggtgcttatcctctcgacctcgatatgcatccatgcccatcttgcattttcatttgtttctccggcatcacggt 21561816  T
Q  137 catggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    |||| |||||||| || |||||||| ||||||||||||||||||    
T  21561817 catgatgctcctcatcatggtgcaattgtgcaccttcctcttct 21561860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 15 - 115
Target Start/End: Complemental strand, 25966613 - 25966513
Alignment:
Q  15 gacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatca 114  Q
    |||||||||||  |||||  |||||||||||||||| ||||||| ||||||||||||||| ||||| || |||||||||||||  |||||||||||||||    
T  25966613 gacatcatttcttagcccagataattcaacaccttgtctttgttgctcggtgcttatcctctcaacttcagtttgcatccatgctcatctttcattatca 25966514  T
Q  115 t 115  Q
    |    
T  25966513 t 25966513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 37 - 180
Target Start/End: Complemental strand, 11218556 - 11218413
Alignment:
Q  37 aattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatggt 136  Q
    ||||||||||||| | || |||||| |||||||||||| || ||||| || |||||||||| |||| || |||| |||||  || |||| |  | |||||    
T  11218556 aattcaacaccttacattagttactaggtgcttatcctctcgacctcagtatgcatccatgcccatattacattttcatttgtttctccggcatcatggt 11218457  T
Q  137 catggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    ||||||||||||| || |||||||  ||||||||||||||||||    
T  11218456 catggtgctcctcatcatggtgcagttgtgcaccttcctcttct 11218413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 18010795 - 18010720
Alignment:
Q  35 ataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    ||||||| ||||||||||| |||| |||||||||||||||||  |||||  |||||||||||| ||||||||||||    
T  18010795 ataattcgacaccttgcctctgttgctcggtgcttatcctttgtacctcattttgcatccatgcccatctttcatt 18010720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 23519007 - 23519065
Alignment:
Q  39 ttcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatg 97  Q
    |||||||||||| |||||||||||||||||||| |||| ||| ||||||||||||||||    
T  23519007 ttcaacaccttgtctttgttactcggtgcttattctttgaacttcggtttgcatccatg 23519065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 39 - 180
Target Start/End: Original strand, 20017509 - 20017650
Alignment:
Q  39 ttcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatggtca 138  Q
    |||||||||||||||||||| |||||||||||| ||||| ||||||||   |||||||| ||||||| |||  |||||  || | ||    ||| |||||    
T  20017509 ttcaacaccttgcctttgttgctcggtgcttattctttcgacctcggtagtcatccatgcccatcttgcatcttcatttgtttcaccttcattagggtca 20017608  T
Q  139 tggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    ||||| ||||| || |||||||  || |||||||||||||||    
T  20017609 tggtgttcctcatcatggtgcagttgagcaccttcctcttct 20017650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 39 - 180
Target Start/End: Original strand, 22166824 - 22166965
Alignment:
Q  39 ttcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatggtca 138  Q
    |||||||||||||||||||| |||||||||||| ||||| ||||||||   |||||||| ||||||| |||  |||||  || | ||    ||| |||||    
T  22166824 ttcaacaccttgcctttgttgctcggtgcttattctttcgacctcggtagtcatccatgcccatcttgcatcttcatttgtttcaccttcattagggtca 22166923  T
Q  139 tggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    ||||| ||||| || |||||||  || |||||||||||||||    
T  22166924 tggtgttcctcatcatggtgcagttgagcaccttcctcttct 22166965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 29685509 - 29685451
Alignment:
Q  39 ttcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatg 97  Q
    |||||||||||| ||||||| ||||||| ||||||||| ||| ||||||||||||||||    
T  29685509 ttcaacaccttgtctttgttgctcggtgattatcctttgaacttcggtttgcatccatg 29685451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 86
Target Start/End: Original strand, 22768399 - 22768446
Alignment:
Q  39 ttcaacaccttgcctttgttactcggtgcttatcctttcaacctcggt 86  Q
    |||||||||||||||||||| ||||||| |||| ||||||||||||||    
T  22768399 ttcaacaccttgcctttgttgctcggtgtttattctttcaacctcggt 22768446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 30672990 - 30673065
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttg 89  Q
    ||||||||||||  |||||  ||||||||||||||| |||||||| |||| | |||||||| |||||||| |||||    
T  30672990 ggacatcatttcctagcccggataattcaacacctttcctttgttgctcgattcttatcctctcaacctcagtttg 30673065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 179
Target Start/End: Original strand, 8725349 - 8725398
Alignment:
Q  130 ttatggtcatggtgctcctcttcttggtgcaagtgtgcaccttcctcttc 179  Q
    |||||||||||| |||||||||| ||||||| |||||||||||| |||||    
T  8725349 ttatggtcatggggctcctcttcatggtgcatgtgtgcaccttcgtcttc 8725398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 104
Target Start/End: Complemental strand, 20169178 - 20169113
Alignment:
Q  39 ttcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatct 104  Q
    |||||||||||||||||||| || |||| |||| ||||||||||||||   |||||||| ||||||    
T  20169178 ttcaacaccttgcctttgttgcttggtgtttattctttcaacctcggtagtcatccatgcccatct 20169113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 176
Target Start/End: Original strand, 21561852 - 21561883
Alignment:
Q  145 tcctcttcttggtgcaagtgtgcaccttcctc 176  Q
    ||||||||||||||||||||||||||||||||    
T  21561852 tcctcttcttggtgcaagtgtgcaccttcctc 21561883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 19586843 - 19586901
Alignment:
Q  39 ttcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatg 97  Q
    |||||||||||| |||||||  ||||||| ||| |||| ||| ||||||||||||||||    
T  19586843 ttcaacaccttgtctttgttgttcggtgcatattctttgaacttcggtttgcatccatg 19586901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 129; Significance: 6e-67; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 14 - 190
Target Start/End: Complemental strand, 44404 - 44228
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatc 113  Q
    |||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||  |||||||||||| ||||||||||    
T  44404 ggacatcatttcggagccctgataattcaacactttgcctttgttgctcggtgcttatcctttcaacctcggtttatatccatgtccatatttcattatc 44305  T
Q  114 attgtttcctccagttttatggtcatggtgctcctcttcttggtgcaagtgtgcaccttcctcttctccaatgatgt 190  Q
    |||||||||||| |||| |||||||||||||| |||  |||||||||||||||||||||||||||||||||| ||||    
T  44304 attgtttcctccggtttcatggtcatggtgcttctccacttggtgcaagtgtgcaccttcctcttctccaataatgt 44228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 14 - 190
Target Start/End: Complemental strand, 51793 - 51617
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatc 113  Q
    |||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||  |||||||||||| ||||||||||    
T  51793 ggacatcatttcggagccctgataattcaacactttgcctttgttgctcggtgcttatcctttcaacctcggtttatatccatgtccatatttcattatc 51694  T
Q  114 attgtttcctccagttttatggtcatggtgctcctcttcttggtgcaagtgtgcaccttcctcttctccaatgatgt 190  Q
    |||||||||||| |||| |||||||||||||| |||  |||||||||||||||||||||||||||||||||| ||||    
T  51693 attgtttcctccggtttcatggtcatggtgcttctccacttggtgcaagtgtgcaccttcctcttctccaataatgt 51617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 122; Significance: 9e-63; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 14 - 143
Target Start/End: Original strand, 26192866 - 26192995
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatc 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26192866 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatc 26192965  T
Q  114 attgtttcctccagttttatggtcatggtg 143  Q
    |||||||||||| |||| ||||||||||||    
T  26192966 attgtttcctccggtttcatggtcatggtg 26192995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 35 - 179
Target Start/End: Original strand, 17867315 - 17867459
Alignment:
Q  35 ataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatg 134  Q
    |||||||||||||| ||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||    
T  17867315 ataattcaacacctagccttagttgctcggtgcttatcctttcaacctcggttcgcatccatgtccatctttcattatcattttttcctccagtttcatg 17867414  T
Q  135 gtcatggtgctcctcttcttggtgcaagtgtgcaccttcctcttc 179  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    
T  17867415 gtcatggtgatcctcttcttggtgcaagtgtgcaccttcctcttc 17867459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 22045904 - 22046000
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    ||||||||||||  |||||  |||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  22045904 ggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatctttcatt 22046000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 25356482 - 25356386
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    ||||||||||||  |||||  |||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  25356482 ggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatctttcatt 25356386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 27626564 - 27626468
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    ||||||||||||  |||||  |||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  27626564 ggacatcatttcttagcccagataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatctttcatt 27626468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 25368865 - 25369000
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatc 113  Q
    ||||||||||||   ||||  ||| ||||||| |||||||||||| ||||||||||||||| | |||||| ||||||||||||| |||||||||||| ||    
T  25368865 ggacatcatttctttgcccgaatatttcaacatcttgcctttgttgctcggtgcttatcctctgaacctcagtttgcatccatgcccatctttcattttc 25368964  T
Q  114 attgtttcctccagttttatggtcatggtgctcctc 149  Q
    |  |||| |||| || | ||||||||||||||||||    
T  25368965 aaagtttgctccggtgtcatggtcatggtgctcctc 25369000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 81 - 184
Target Start/End: Original strand, 25372275 - 25372378
Alignment:
Q  81 ctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatggtcatggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    |||||| || ||||||| |||||||||||| |||||||||||||| |  | ||||||||| |||||||| || |||||||||||||||||||||||||||    
T  25372275 ctcggtgtgtatccatgcccatctttcattttcattgtttcctccggcatcatggtcatgttgctcctcatcatggtgcaagtgtgcaccttcctcttct 25372374  T
Q  181 ccaa 184  Q
    ||||    
T  25372375 ccaa 25372378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 12858 - 12954
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    |||||||||||   |||||  |||||||||||||||| ||||||| |||||||||||| ||||  ||||||||||||||||||| ||||||||||||    
T  12858 ggacatcatttattagcccggataattcaacaccttgtctttgttgctcggtgcttattctttgtacctcggtttgcatccatgcccatctttcatt 12954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 36 - 180
Target Start/End: Complemental strand, 116452 - 116309
Alignment:
Q  36 taattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatgg 135  Q
    ||||||||||||||||||||||| |||| |||||||||| || |||||||| |||||||||| ||||||  |||| |||||  || || |    ||||||    
T  116452 taattcaacaccttgcctttgttgctcgatgcttatcctctcgacctcggtatgcatccatgcccatctcgcattttcatttgtttcttcttcattatgg 116353  T
Q  136 tcatggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    |||| |||||| || || |||||||| |||||||||| |||||||    
T  116352 tcat-gtgctcttcctcatggtgcaattgtgcacctttctcttct 116309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 39 - 180
Target Start/End: Complemental strand, 27630452 - 27630311
Alignment:
Q  39 ttcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcat---tgtttcctccagttttatgg 135  Q
    |||||||||||||||||||| |||||||||||| ||||| ||||||||   |||||||| ||||||| |||| ||||   |||  ||| ||   | | ||    
T  27630452 ttcaacaccttgcctttgttgctcggtgcttattctttcgacctcggtagtcatccatgcccatcttgcattttcatgtgtgtcaccttca---tcaggg 27630356  T
Q  136 tcatggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    |||||||||||||| || |||||||| ||||||||||||||||||    
T  27630355 tcatggtgctcctcatcatggtgcaattgtgcaccttcctcttct 27630311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 180
Target Start/End: Original strand, 23160644 - 23160785
Alignment:
Q  39 ttcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatggtca 138  Q
    |||||||||||||||||||| |||||| ||||| ||||| ||||||||   |||||||| ||||||| |||| |||||  |  | ||    | | |||||    
T  23160644 ttcaacaccttgcctttgttgctcggtacttattctttcgacctcggtagtcatccatgcccatcttgcattttcatttgtgtcaccttcatcagggtca 23160743  T
Q  139 tggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    ||||||||||| || |||||||| ||||||||||||||||||    
T  23160744 tggtgctcctcatcatggtgcaattgtgcaccttcctcttct 23160785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 180
Target Start/End: Original strand, 23571901 - 23572042
Alignment:
Q  39 ttcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatggtca 138  Q
    |||||||||||||||||||| |||||| ||||| ||||| ||||||||   |||||||| ||||||| |||| |||||  |  | ||    | | |||||    
T  23571901 ttcaacaccttgcctttgttgctcggtacttattctttcgacctcggtagtcatccatgcccatcttgcattttcatttgtgtcaccttcatcagggtca 23572000  T
Q  139 tggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    ||||||||||| || |||||||| ||||||||||||||||||    
T  23572001 tggtgctcctcatcatggtgcaattgtgcaccttcctcttct 23572042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 86
Target Start/End: Original strand, 27770067 - 27770117
Alignment:
Q  36 taattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggt 86  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  27770067 taattcaacaccttgcctttgttgctcggtgcttatcctttcgacctcggt 27770117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 39 - 180
Target Start/End: Complemental strand, 16774602 - 16774461
Alignment:
Q  39 ttcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatggtca 138  Q
    |||||||||||||||||||| |||||||||||| ||||| ||||||||   |||||||| ||||||| |||  |||||  || | ||    ||| |||||    
T  16774602 ttcaacaccttgcctttgttgctcggtgcttattctttcgacctcggtagtcatccatgcccatcttgcatcttcatttgtttcaccttcattagggtca 16774503  T
Q  139 tggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    ||||| ||||| || |||||||  || |||||||||||||||    
T  16774502 tggtgttcctcatcatggtgcagttgagcaccttcctcttct 16774461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 180
Target Start/End: Original strand, 24796564 - 24796705
Alignment:
Q  39 ttcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatggtca 138  Q
    |||||||||||||||||||| ||||||| |||| ||||| ||||||||   |||||||| ||||||| |||  |||||  || | ||    ||| |||||    
T  24796564 ttcaacaccttgcctttgttgctcggtgtttattctttcgacctcggtagtcatccatgcccatcttgcatcttcatttgtttcaccttcattagggtca 24796663  T
Q  139 tggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    ||||| ||||| || |||||||  || |||||||||||||||    
T  24796664 tggtgttcctcatcatggtgcagttgagcaccttcctcttct 24796705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 180
Target Start/End: Original strand, 24821413 - 24821494
Alignment:
Q  99 ccatctttcattatcattgtttcctccagttttatggtcatggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    ||||||| |||| |||||| || |||| |  | |||||||||||||||||| || |||||||| ||||||||||||||||||    
T  24821413 ccatcttgcattttcattggtttctccggcatcatggtcatggtgctcctcatcatggtgcaattgtgcaccttcctcttct 24821494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 24170304 - 24170208
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    ||||||| ||||  |||||  ||| ||| |||||||||||||||| ||| ||||| |||||||  ||||| ||||||||||||| ||||||| ||||    
T  24170304 ggacatcgtttcttagcccggatagttcgacaccttgcctttgttgctcagtgctaatcctttgtacctcagtttgcatccatgaccatcttccatt 24170208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 25146056 - 25146131
Alignment:
Q  35 ataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    ||||||| ||| ||||||| |||| ||||||||| |||||||  |||||  |||||||||||| ||||||||||||    
T  25146056 ataattcgacaacttgcctctgttgctcggtgctaatcctttgtacctcattttgcatccatgcccatctttcatt 25146131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 25372229 - 25372281
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtg 66  Q
    ||||||||||||| |||||  ||||||||| |||||||||||||| |||||||    
T  25372229 ggacatcatttcgtagcccggataattcaataccttgcctttgttgctcggtg 25372281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 130 - 173
Target Start/End: Original strand, 12962 - 13005
Alignment:
Q  130 ttatggtcatggtgctcctcttcttggtgcaagtgtgcaccttc 173  Q
    |||||||||||| |||||||||| ||||||| ||||||||||||    
T  12962 ttatggtcatggggctcctcttcatggtgcatgtgtgcaccttc 13005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 130 - 173
Target Start/End: Original strand, 22046008 - 22046051
Alignment:
Q  130 ttatggtcatggtgctcctcttcttggtgcaagtgtgcaccttc 173  Q
    |||||||||||| |||||||||| ||||||| ||||||||||||    
T  22046008 ttatggtcatggggctcctcttcatggtgcatgtgtgcaccttc 22046051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 74
Target Start/End: Original strand, 24821368 - 24821407
Alignment:
Q  35 ataattcaacaccttgcctttgttactcggtgcttatcct 74  Q
    |||||||||||||||||||||| | |||||||||||||||    
T  24821368 ataattcaacaccttgcctttgatgctcggtgcttatcct 24821407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 176
Target Start/End: Original strand, 24821486 - 24821517
Alignment:
Q  145 tcctcttcttggtgcaagtgtgcaccttcctc 176  Q
    ||||||||||||||||||||||||||||||||    
T  24821486 tcctcttcttggtgcaagtgtgcaccttcctc 24821517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 130 - 173
Target Start/End: Complemental strand, 25356378 - 25356335
Alignment:
Q  130 ttatggtcatggtgctcctcttcttggtgcaagtgtgcaccttc 173  Q
    |||||||||||| |||||||||| ||||||| ||||||||||||    
T  25356378 ttatggtcatggggctcctcttcatggtgcatgtgtgcaccttc 25356335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 25339371 - 25339428
Alignment:
Q  39 ttcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccat 96  Q
    ||||||||||||  |||||| |||||||||||| |||| ||| | |||||||||||||    
T  25339371 ttcaacaccttgtatttgttgctcggtgcttattctttgaactttggtttgcatccat 25339428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 173
Target Start/End: Original strand, 23160777 - 23160805
Alignment:
Q  145 tcctcttcttggtgcaagtgtgcaccttc 173  Q
    |||||||||||||||||||||||||||||    
T  23160777 tcctcttcttggtgcaagtgtgcaccttc 23160805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 173
Target Start/End: Original strand, 23572034 - 23572062
Alignment:
Q  145 tcctcttcttggtgcaagtgtgcaccttc 173  Q
    |||||||||||||||||||||||||||||    
T  23572034 tcctcttcttggtgcaagtgtgcaccttc 23572062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 173
Target Start/End: Complemental strand, 27630319 - 27630291
Alignment:
Q  145 tcctcttcttggtgcaagtgtgcaccttc 173  Q
    |||||||||||||||||||||||||||||    
T  27630319 tcctcttcttggtgcaagtgtgcaccttc 27630291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 117; Significance: 8e-60; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 35 - 179
Target Start/End: Complemental strand, 15064710 - 15064566
Alignment:
Q  35 ataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatg 134  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||    
T  15064710 ataattcaacaccttgccgtagttgctcggtgcttatcctttcaacctcggtttgcatccatgtccatcttttattatcattgtttcctccggtttcatg 15064611  T
Q  135 gtcatggtgctcctcttcttggtgcaagtgtgcaccttcctcttc 179  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    
T  15064610 gtcatggtgatcctcttcttggtgcaagtgtgcaccttcctcttc 15064566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 35 - 179
Target Start/End: Complemental strand, 824576 - 824432
Alignment:
Q  35 ataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatg 134  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||| |||    
T  824576 ataattcaacaccttgccttagttgctcggtgcttatcctttcaacctcagtttgcatccatgtccatctttcattatcattgtttcgtccggtttcatg 824477  T
Q  135 gtcatggtgctcctcttcttggtgcaagtgtgcaccttcctcttc 179  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||    
T  824476 gtcatggtgatcctcttcttggtgcaggtgtgcaccttcctcttc 824432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 14 - 183
Target Start/End: Complemental strand, 20107246 - 20107077
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatc 113  Q
    ||||||||||||| || ||  |||| ||||||||||||||||||| | ||||||||||||| ||||||||  | |||||||||| |||||||||||||||    
T  20107246 ggacatcatttcgtagtccggataactcaacaccttgcctttgttgcacggtgcttatcctctcaacctctatgtgcatccatgcccatctttcattatc 20107147  T
Q  114 attgtttcctccagttttatggtcatggtgctcctcttcttggtgcaagtgtgcaccttcctcttctcca 183  Q
    |||||||||||| || | ||||||||||||||||||  | |||||||||||| |||||||||||||||||    
T  20107146 attgtttcctccggtatcatggtcatggtgctcctcagcatggtgcaagtgtacaccttcctcttctcca 20107077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 8716834 - 8716738
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    ||||||||||||  |||||  |||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  8716834 ggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatctttcatt 8716738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 18286595 - 18286499
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    ||||||||||||  |||||  |||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  18286595 ggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatctttcatt 18286499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 35 - 118
Target Start/End: Original strand, 15918034 - 15918117
Alignment:
Q  35 ataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgt 118  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||    
T  15918034 ataattcaacaccttgccttagttgctcggtgcttatcctttcaacctcagtttgcatcgatgtccatctttcactatcattgt 15918117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 14 - 115
Target Start/End: Original strand, 16466859 - 16466960
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatc 113  Q
    ||||||||||||  |||||  |||||||||||||||||||||||| ||||||||||||||| |  ||||||||||||||||||| |||||||||||| ||    
T  16466859 ggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctctgtacctcggtttgcatccatgcccatctttcattgtc 16466958  T
Q  114 at 115  Q
    ||    
T  16466959 at 16466960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 14550066 - 14549970
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    |||||| |||||  |||||  |||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  14550066 ggacattatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatctttcatt 14549970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 37 - 180
Target Start/End: Original strand, 16150770 - 16150913
Alignment:
Q  37 aattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatggt 136  Q
    |||||||||||||||||| ||| || |||||||||||| ||  ||||||| |||||||||| ||||||| |||| |||||  ||  ||| |  | |||||    
T  16150770 aattcaacaccttgccttagttgcttggtgcttatcctctcggcctcggtatgcatccatgcccatcttgcattttcatttgtttatccggcatcatggt 16150869  T
Q  137 catggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    ||||||||||||| || |||| ||| ||||||||||||||||||    
T  16150870 catggtgctcctcatcatggtacaattgtgcaccttcctcttct 16150913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 37 - 180
Target Start/End: Complemental strand, 16530991 - 16530848
Alignment:
Q  37 aattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatggt 136  Q
    ||||||| ||||||||||| || ||||||||||||||| || |||||||| |||||||||| ||||||| |||| |||||  || | ||    | |||||    
T  16530991 aattcaataccttgcctttcttgctcggtgcttatcctctcgacctcggtatgcatccatgcccatcttgcattttcatttgtttcaccttcatcatggt 16530892  T
Q  137 catggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    ||||||||||||| || ||||| || ||||||||||||||||||    
T  16530891 catggtgctcctcatcatggtgtaattgtgcaccttcctcttct 16530848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 37 - 180
Target Start/End: Original strand, 16634671 - 16634814
Alignment:
Q  37 aattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatggt 136  Q
    ||||||| ||||||||||| || ||||||||||||||| || |||||||| |||||||||| ||||||| |||| |||||  || | ||    | |||||    
T  16634671 aattcaataccttgcctttcttgctcggtgcttatcctctcgacctcggtatgcatccatgcccatcttgcattttcatttgtttcaccttcatcatggt 16634770  T
Q  137 catggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    ||||||||||||| || ||||| || ||||||||||||||||||    
T  16634771 catggtgctcctcatcatggtgtaattgtgcaccttcctcttct 16634814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 48803105 - 48803199
Alignment:
Q  16 acatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    ||||||||||  |||||  |||||||||||||||||||||||| |||||||||||||||||  ||||| ||||||||||||| ||||||| ||||    
T  48803105 acatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatcttccatt 48803199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 13656903 - 13656807
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    |||||||||| |  |||||  ||||||||||||||||||||||||  ||||||||||||||||  ||||| ||||||||||||| ||||||||||||    
T  13656903 ggacatcattccttagcccggataattcaacaccttgcctttgttgttcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt 13656807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 13672827 - 13672661
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatc 113  Q
    ||||||||||||  |||||  |||||||||||||||||||||||| |||||||||||| ||||| ||||||||   |||||||| ||||||| |||  ||    
T  13672827 ggacatcatttcttagcccagataattcaacaccttgcctttgttgctcggtgcttattctttcgacctcggtagtcatccatgcccatcttgcatcttc 13672728  T
Q  114 attgtttcctccagttttatggtcatggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    |||  || | ||    ||| |||||||||| ||||| || |||||||  || |||||||||||||||    
T  13672727 atttgtttcaccttcattagggtcatggtgttcctcatcatggtgcagttgagcaccttcctcttct 13672661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 113 - 179
Target Start/End: Original strand, 15921335 - 15921401
Alignment:
Q  113 cattgtttcctccagttttatggtcatggtgctcctcttcttggtgcaagtgtgcaccttcctcttc 179  Q
    ||||||||||||  |||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  15921335 cattgtttcctctggtttcatggtcatggtgatcctcttcttggtgcaagtgtgcaccttcctcttc 15921401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 37 - 110
Target Start/End: Original strand, 16761058 - 16761131
Alignment:
Q  37 aattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    |||||||||||||||||| ||| || |||||||||||| || |||||||| |||||||||| ||||||| ||||    
T  16761058 aattcaacaccttgccttagttgctaggtgcttatcctctcgacctcggtatgcatccatgcccatcttgcatt 16761131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 39 - 180
Target Start/End: Original strand, 18594538 - 18594679
Alignment:
Q  39 ttcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatggtca 138  Q
    |||||||||||||||||||| ||| |||||||| ||||| ||||||||   |||||||| ||||||| |||  |||||  || | ||    ||| |||||    
T  18594538 ttcaacaccttgcctttgttgctcagtgcttattctttcgacctcggtagtcatccatgcccatcttgcatcttcatttgtttcaccttcattagggtca 18594637  T
Q  139 tggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    ||||| ||||| || |||||||  ||||||||||||||||||    
T  18594638 tggtggtcctcatcatggtgcagttgtgcaccttcctcttct 18594679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 39 - 180
Target Start/End: Complemental strand, 18617146 - 18617005
Alignment:
Q  39 ttcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatggtca 138  Q
    |||||||||||||||||||| ||| |||||||| ||||| ||||||||   |||||||| ||||||| |||  |||||  || | ||    ||| |||||    
T  18617146 ttcaacaccttgcctttgttgctcagtgcttattctttcgacctcggtagtcatccatgcccatcttgcatcttcatttgtttcaccttcattagggtca 18617047  T
Q  139 tggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    ||||| ||||| || |||||||  ||||||||||||||||||    
T  18617046 tggtggtcctcatcatggtgcagttgtgcaccttcctcttct 18617005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 39 - 122
Target Start/End: Complemental strand, 5396086 - 5396003
Alignment:
Q  39 ttcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcc 122  Q
    |||||||||||| ||||||| |||||||| | | |||| ||| |||||||||||||||| ||| | ||||| || || ||||||    
T  5396086 ttcaacaccttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatccatgcccaccgttcatcattatagtttcc 5396003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 130 - 173
Target Start/End: Complemental strand, 8716730 - 8716687
Alignment:
Q  130 ttatggtcatggtgctcctcttcttggtgcaagtgtgcaccttc 173  Q
    |||||||||||| |||||||||| ||||||| ||||||||||||    
T  8716730 ttatggtcatggggctcctcttcatggtgcatgtgtgcaccttc 8716687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 39 - 122
Target Start/End: Complemental strand, 13741379 - 13741296
Alignment:
Q  39 ttcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcc 122  Q
    |||||||||||| ||| ||| |||||||| ||| |||| ||| |||||||||||||||| ||| | ||||| || || ||||||    
T  13741379 ttcaacaccttgtcttcgttgctcggtgcatattctttgaacttcggtttgcatccatgcccaccgttcatcattatagtttcc 13741296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 130 - 173
Target Start/End: Complemental strand, 14549962 - 14549919
Alignment:
Q  130 ttatggtcatggtgctcctcttcttggtgcaagtgtgcaccttc 173  Q
    |||||||||||| |||||||||| ||||||| ||||||||||||    
T  14549962 ttatggtcatggggctcctcttcatggtgcatgtgtgcaccttc 14549919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 132 - 173
Target Start/End: Original strand, 48803209 - 48803250
Alignment:
Q  132 atggtcatggtgctcctcttcttggtgcaagtgtgcaccttc 173  Q
    |||||||||||||| |||||| |||||||||| |||||||||    
T  48803209 atggtcatggtgcttctcttcatggtgcaagtttgcaccttc 48803250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 8783357 - 8783413
Alignment:
Q  39 ttcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatcca 95  Q
    |||||||| ||| ||||||| |||||||| ||| |||| ||| ||||||||||||||    
T  8783357 ttcaacactttgtctttgttgctcggtgcatattctttgaacttcggtttgcatcca 8783413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 110; Significance: 1e-55; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 35 - 180
Target Start/End: Complemental strand, 132576 - 132431
Alignment:
Q  35 ataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatg 134  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||    
T  132576 ataattcaacaccttgccttagttgctcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttccttcggtttcatg 132477  T
Q  135 gtcatggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    ||||||||| |||| |||||||||||| ||||||||||||| ||||    
T  132476 gtcatggtgatccttttcttggtgcaattgtgcaccttccttttct 132431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 39 - 122
Target Start/End: Complemental strand, 17315 - 17232
Alignment:
Q  39 ttcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcc 122  Q
    |||||||||||| ||||||| |||||||| | | |||| ||| |||||||||||||||| ||| | ||||| || || ||||||    
T  17315 ttcaacaccttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatccatgcccaccgttcatcattatagtttcc 17232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 103; Significance: 2e-51; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 13693849 - 13693683
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatc 113  Q
    |||||||||||||||| ||  ||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  13693849 ggacatcatttcggagtccggatagttcaacaccttgcctttgttgctcggtgcttatcctttcaacctcggtttacatccatgtccatctttcatgatc 13693750  T
Q  114 attgtttcctccagttttatggtcatggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
     |||||||||||  | | |||| ||||||||||||| || ||||||||||||||||||||| |||||    
T  13693749 gttgtttcctccgatatcatggccatggtgctcctcatcatggtgcaagtgtgcaccttccgcttct 13693683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 14 - 181
Target Start/End: Complemental strand, 17386726 - 17386560
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatc 113  Q
    ||||||||||||| |||||  |||||||||||||||||||||||| |||| |||||||||| ||||||| ||| || ||||||| |||||||||||| ||    
T  17386726 ggacatcatttcgtagcccggataattcaacaccttgcctttgttgctcgttgcttatcctctcaacctaggtgtgtatccatgcccatctttcatt-tc 17386628  T
Q  114 attgtttcctccagttttatggtcatggtgctcctcttcttggtgcaagtgtgcaccttcctcttctc 181  Q
    ||| |||| ||| |  | |||||||||||||||||| || ||||||||||||||||||||||||||||    
T  17386627 attatttcttccggcatcatggtcatggtgctcctcatcatggtgcaagtgtgcaccttcctcttctc 17386560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 15 - 184
Target Start/End: Complemental strand, 3278439 - 3278270
Alignment:
Q  15 gacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatca 114  Q
    |||||||||||  | |||  |||||||||||||||| ||||||| || |||| ||||||| |||||||| ||||||||||||| |||||||||||| |||    
T  3278439 gacatcatttcttatcccggataattcaacaccttgtctttgttgcttggtgtttatcctctcaacctcagtttgcatccatgcccatctttcattttca 3278340  T
Q  115 ttgtttcctccagttttatggtcatggtgctcctcttcttggtgcaagtgtgcaccttcctcttctccaa 184  Q
    |||||| ||||    | |||||||||||| ||||| || |||||||||||||||||||||||||||||||    
T  3278339 ttgttttctccgacatcatggtcatggtgttcctcatcatggtgcaagtgtgcaccttcctcttctccaa 3278270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 37 - 180
Target Start/End: Original strand, 20157720 - 20157863
Alignment:
Q  37 aattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatggt 136  Q
    ||||||||||| |||||||||| ||||||||||||||| || |||||||| || |||||||  ||||||||||| ||||||||| |||| |  | |||||    
T  20157720 aattcaacaccctgcctttgtttctcggtgcttatcctctccacctcggtatgtatccatgctcatctttcattttcattgttttctccggcatcatggt 20157819  T
Q  137 catggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    ||||||||||||| || |||||||||||||||||||||||||||    
T  20157820 catggtgctcctcatcatggtgcaagtgtgcaccttcctcttct 20157863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 36 - 180
Target Start/End: Original strand, 13505781 - 13505925
Alignment:
Q  36 taattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatgg 135  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||| |||||||  ||| |||||  || | ||    | ||||    
T  13505781 taattcaacaccttgcctttgttgctcggtgcttatcctttcgacctcggttttcatccatgcccatcttgtattttcatttgtttcaccttcatcatgg 13505880  T
Q  136 tcatggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    |||||||||||||| || |||||||| ||||||||||||||||||    
T  13505881 tcatggtgctcctcatcatggtgcaattgtgcaccttcctcttct 13505925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 7599326 - 7599230
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    ||||||||||||  |||||  |||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  7599326 ggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatctttcatt 7599230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 16374723 - 16374819
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    ||||||||||||  |||||  |||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  16374723 ggacatcatttcttagcccagataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatctttcatt 16374819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 36 - 179
Target Start/End: Complemental strand, 15945563 - 15945420
Alignment:
Q  36 taattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatgg 135  Q
    ||||||||||||||||||||||| ||||||||||||||| || |||||||| |||||||||| ||||||| |||| |||||  || | ||    | ||||    
T  15945563 taattcaacaccttgcctttgttgctcggtgcttatcctctcgacctcggtatgcatccatgcccatcttgcattttcatttgtttcaccttcatcatgg 15945464  T
Q  136 tcatggtgctcctcttcttggtgcaagtgtgcaccttcctcttc 179  Q
    |||||||| ||||| || |||||||| |||||||||||||||||    
T  15945463 tcatggtgttcctcatcatggtgcaattgtgcaccttcctcttc 15945420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 35 - 182
Target Start/End: Original strand, 14446830 - 14446974
Alignment:
Q  35 ataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatg 134  Q
    ||||||||||||||| ||||| || ||||||||||||||| ||||||||  | || |||||||||||||||||||| |||||||| ||| | |  | |||    
T  14446830 ataattcaacaccttcccttttttgctcggtgcttatcctctcaacctcattgtgtatccatgtccatctttcattgtcattgttgccttcggcgtcatg 14446929  T
Q  135 gtcatggtgctcctcttcttggtgcaagtgtgcaccttcctcttctcc 182  Q
    |||||||||   ||| || |||||||| ||||||||||||||||||||    
T  14446930 gtcatggtg---ctcatcatggtgcaaatgtgcaccttcctcttctcc 14446974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 36 - 180
Target Start/End: Original strand, 3340485 - 3340629
Alignment:
Q  36 taattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatgg 135  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||| | |||||||| ||||||| |||| |||||  || | ||    | ||||    
T  3340485 taattcaacaccttgcctttgttgctcggtgcttatcctttcgacctcggtattcatccatgcccatcttgcattttcatttgtttcaccttcatcatgg 3340584  T
Q  136 tcatggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    |||||||||||||| || |||||||  |||||||||||| |||||    
T  3340585 tcatggtgctcctcatcatggtgcatttgtgcaccttccgcttct 3340629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 10145981 - 10145885
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    ||||||||||||  |||||  |||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||| ||||| ||||||    
T  10145981 ggacatcatttcttagcccagataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatcgttcatt 10145885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 13137413 - 13137509
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    ||||||||||||  |||||  |||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||| ||||| ||||||    
T  13137413 ggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatcgttcatt 13137509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 13188661 - 13188757
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    ||||||||||||  |||||  |||||||||||||||||||||||| |||||||| ||||||||  ||||||||||||||||||| ||||||||||||    
T  13188661 ggacatcatttcttagcccagataattcaacaccttgcctttgttgctcggtgcctatcctttgtacctcggtttgcatccatgcccatctttcatt 13188757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 37 - 180
Target Start/End: Original strand, 12161331 - 12161474
Alignment:
Q  37 aattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatggt 136  Q
    |||||||||||||||||||||| ||||||| ||||||| || |||||||| |||||||||| ||||||| |||| |||||  || ||||    | || ||    
T  12161331 aattcaacaccttgcctttgttgctcggtgtttatcctctcgacctcggtatgcatccatgcccatcttgcattttcatttgtttctccgtcatcatagt 12161430  T
Q  137 catggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    ||||||||||||| || || ||||| ||||||||||||||||||    
T  12161431 catggtgctcctcatcatgatgcaattgtgcaccttcctcttct 12161474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 15630221 - 15630296
Alignment:
Q  35 ataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    |||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  15630221 ataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatctttcatt 15630296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 12188319 - 12188415
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    ||||||||||||  |||||  |||| ||||||||||||||||||| |||||| ||||||||||  ||||||||||||||||||| ||||||||||||    
T  12188319 ggacatcatttcttagcccagataagtcaacaccttgcctttgttgctcggttcttatcctttgtacctcggtttgcatccatgcccatctttcatt 12188415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 13196694 - 13196769
Alignment:
Q  35 ataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    |||||||||||||||||||||||| |||||||||||||||||  ||||| ||||||||||||| ||||||||||||    
T  13196694 ataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt 13196769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 12194733 - 12194829
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    ||||||||||||  |||||  |||| ||||||||||||||||||| |||||| ||||||||||  ||||||||||||||||||| ||| ||||||||    
T  12194733 ggacatcatttcttagcccagataagtcaacaccttgcctttgttgctcggttcttatcctttgtacctcggtttgcatccatgcccacctttcatt 12194829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 13689637 - 13689541
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    |||||||||| |  |||||  ||||||||||||||||||||||||  ||||||||||||||||  ||||| ||||||||||||| ||||||||||||    
T  13689637 ggacatcattccttagcccggataattcaacaccttgcctttgttgttcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt 13689541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 37 - 176
Target Start/End: Complemental strand, 4369621 - 4369482
Alignment:
Q  37 aattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatggt 136  Q
    |||||||||||||||||| ||| || |||||||||||| ||  ||||||| |||||||||| ||||||| |||| |||||  ||  ||| |  | |||||    
T  4369621 aattcaacaccttgccttagttgcttggtgcttatcctctcggcctcggtatgcatccatgcccatcttgcattttcatttgtttatccggcatcatggt 4369522  T
Q  137 catggtgctcctcttcttggtgcaagtgtgcaccttcctc 176  Q
    ||||||||||||| || |||||||| || |||||||||||    
T  4369521 catggtgctcctcatcatggtgcaattgcgcaccttcctc 4369482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 180
Target Start/End: Complemental strand, 16654664 - 16654521
Alignment:
Q  37 aattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatggt 136  Q
    |||||| ||||||||||| ||| || |||||||||||| ||  ||||||| |||||||||| ||||||| |||| |||||  ||  ||| |  | |||||    
T  16654664 aattcatcaccttgccttagttgcttggtgcttatcctctcggcctcggtatgcatccatgcccatcttgcattttcatttgtttatccggcatcatggt 16654565  T
Q  137 catggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    ||||||||||||| || |||| ||| ||||||||||| ||||||    
T  16654564 catggtgctcctcatcatggtacaattgtgcaccttcttcttct 16654521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 180
Target Start/End: Original strand, 22165571 - 22165714
Alignment:
Q  37 aattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatggt 136  Q
    |||||||||||||||||| ||| || |||||||||||| |   ||||||| ||||||||||  |||||| |||| |||||  ||  ||| |  | |||||    
T  22165571 aattcaacaccttgccttagttgcttggtgcttatcctctagtcctcggtatgcatccatgctcatcttgcattttcatttgtttatccggcatcatggt 22165670  T
Q  137 catggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    ||||||||||||| || |||| ||| ||||||||||||||||||    
T  22165671 catggtgctcctcatcatggtacaattgtgcaccttcctcttct 22165714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 37 - 180
Target Start/End: Original strand, 10603800 - 10603943
Alignment:
Q  37 aattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatggt 136  Q
    ||||| ||||||| |||| ||| || |||| ||||||| ||| |||| || |||||||||| ||||||| |||| |||||  ||  ||| |  | |||||    
T  10603800 aattccacaccttcccttagttgcttggtgtttatcctctcagcctcagtatgcatccatgcccatcttgcattttcatttgtttatccggcatcatggt 10603899  T
Q  137 catggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    ||||||||||||  || |||| ||| ||||||||||||||||||    
T  10603900 catggtgctccttatcatggtacaattgtgcaccttcctcttct 10603943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 105
Target Start/End: Original strand, 10161457 - 10161523
Alignment:
Q  39 ttcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctt 105  Q
    |||||||||||||||||||| ||||||| |||| ||||||||||||||   |||||||| |||||||    
T  10161457 ttcaacaccttgcctttgttgctcggtgtttattctttcaacctcggtagtcatccatgcccatctt 10161523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 39 - 105
Target Start/End: Complemental strand, 15644024 - 15643958
Alignment:
Q  39 ttcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctt 105  Q
    |||||||||||||||||||| || |||| |||| ||||||||||||||   |||||||| |||||||    
T  15644024 ttcaacaccttgcctttgttgcttggtgtttattctttcaacctcggtagtcatccatgcccatctt 15643958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 130 - 173
Target Start/End: Complemental strand, 7599222 - 7599179
Alignment:
Q  130 ttatggtcatggtgctcctcttcttggtgcaagtgtgcaccttc 173  Q
    |||||||||||| |||||||||| ||||||| ||||||||||||    
T  7599222 ttatggtcatggggctcctcttcatggtgcatgtgtgcaccttc 7599179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 176
Target Start/End: Original strand, 12161466 - 12161497
Alignment:
Q  145 tcctcttcttggtgcaagtgtgcaccttcctc 176  Q
    ||||||||||||||||||||||||||||||||    
T  12161466 tcctcttcttggtgcaagtgtgcaccttcctc 12161497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1095 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold1095
Description:

Target: scaffold1095; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 2246 - 2080
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatc 113  Q
    |||||||||||||||||||  ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  2246 ggacatcatttcggagcccggataattcaacatcttgcctttgttgctcggtgcttatcctttcaacctcggtttgcatccatgtccatctttctttatc 2147  T
Q  114 attgtttcctccagttttatggtcatggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    ||| |||||||   | | |||||  ||||||||||  || | ||||||||||||||||||| |||||    
T  2146 attatttcctctgttatcatggttttggtgctccttctcatagtgcaagtgtgcaccttccgcttct 2080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 7738 - 7904
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatc 113  Q
    |||||| ||||||||| ||  ||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  7738 ggacattatttcggagtccggatagttcaacaccttgcctttgttgttcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatgatc 7837  T
Q  114 attgtttcctccagttttatggtcatggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
     |||||||||||  | | |||| ||||||||||||| || ||||||||||||||| ||||| |||||    
T  7838 gttgtttcctccgatatcatggccatggtgctcctcctcatggtgcaagtgtgcatcttccgcttct 7904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 4835 - 5001
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatc 113  Q
    ||||||||||| |||| |   |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  4835 ggacatcattttggagtctggataattcaacaccttgcctttgttgctcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatgatc 4934  T
Q  114 attgtttcctccagttttatggtcatggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
     ||||| ||||   | | |||| ||||||||||||| || | ||||||||||||||| ||| |||||    
T  4935 gttgttgcctctgatatcatggccatggtgctcctcctcatagtgcaagtgtgcaccatccacttct 5001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 6e-39; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 35 - 176
Target Start/End: Complemental strand, 21387256 - 21387115
Alignment:
Q  35 ataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatg 134  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||| |||||||| |||  |||| ||| ||| | |||    
T  21387256 ataattcaataccttgcctttgttgctcggtgcttatcctttcaacctcagtttgcatccatgcccacctttcattttcaaagttttctcaagtgtcatg 21387157  T
Q  135 gtcatggtgctcctcttcttggtgcaagtgtgcaccttcctc 176  Q
    ||||||||||||||| || |||||||||| ||||||||||||    
T  21387156 gtcatggtgctcctcatcatggtgcaagtttgcaccttcctc 21387115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 37 - 180
Target Start/End: Complemental strand, 26846614 - 26846471
Alignment:
Q  37 aattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatggt 136  Q
    |||||||||||||||||||||| ||||||||||||||| || |||||||| |||||||||| ||||||| |||| |||||| || |||| |  | |||||    
T  26846614 aattcaacaccttgcctttgttgctcggtgcttatcctctcgacctcggtgtgcatccatgcccatcttgcattttcattggtttctccggcatcatggt 26846515  T
Q  137 catggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    ||||||||||||| || |||||||| ||||||||||||||||||    
T  26846514 catggtgctcctcatcatggtgcaattgtgcaccttcctcttct 26846471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 36 - 180
Target Start/End: Original strand, 30760908 - 30761052
Alignment:
Q  36 taattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatgg 135  Q
    ||||||||||||||||||||||| ||||||||||||||| || |||||||| |||||||||| ||||||| |||| |||||  || || |    ||||||    
T  30760908 taattcaacaccttgcctttgttgctcggtgcttatcctctcgacctcggtatgcatccatgcccatcttgcattttcatttgtttcttcttcattatgg 30761007  T
Q  136 tcatggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    |||||||||||||| || |||||||| ||||||||||||||||||    
T  30761008 tcatggtgctcctcatcatggtgcaattgtgcaccttcctcttct 30761052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 14 - 176
Target Start/End: Complemental strand, 22947401 - 22947239
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatc 113  Q
    ||||||||||||  | |||  ||| |||||||||||||||||||| || |||||||||||| | |||||| ||||||||||||| |||||||||||| ||    
T  22947401 ggacatcatttcttaccccggatatttcaacaccttgcctttgttgcttggtgcttatcctctaaacctccgtttgcatccatggccatctttcattttc 22947302  T
Q  114 attgtttcctccagttttatggtcatggtgctcctcttcttggtgcaagtgtgcaccttcctc 176  Q
    |   |||||||| || | ||||||||||||||||||  | |||||||||| ||||||||||||    
T  22947301 aaattttcctccggtgtcatggtcatggtgctcctcaacatggtgcaagtttgcaccttcctc 22947239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 36 - 180
Target Start/End: Original strand, 20439430 - 20439574
Alignment:
Q  36 taattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatgg 135  Q
    ||||||||||||||||||||||| ||||||||||||||| || |||||||| |||||||||| ||||||| |||| |||||  || | ||    || |||    
T  20439430 taattcaacaccttgcctttgttgctcggtgcttatcctctcgacctcggtatgcatccatgcccatcttgcattttcatttgtttcaccttcattgtgg 20439529  T
Q  136 tcatggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    |||||||||||||| || |||||||| ||||||||||||||||||    
T  20439530 tcatggtgctcctcatcatggtgcaattgtgcaccttcctcttct 20439574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 25008027 - 25008123
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    ||||||||||||  |||||  |||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  25008027 ggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgtccatctttcatt 25008123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 15734504 - 15734408
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    ||||||||||||  |||||  |||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  15734504 ggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatctttcatt 15734408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 20621133 - 20621037
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    ||||||||||||  |||||  |||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  20621133 ggacatcatttcttagcccagataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatctttcatt 20621037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 23747021 - 23746925
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    ||||||||||||  |||||  |||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  23747021 ggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatctttcatt 23746925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 22318728 - 22318824
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    |||| |||||||  |||||  |||||||||||||||||||||||| |||||||||||||||||  ||||| ||||||||||||| ||||||||||||    
T  22318728 ggacgtcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt 22318824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 36 - 180
Target Start/End: Original strand, 25117412 - 25117556
Alignment:
Q  36 taattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatgg 135  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||  | |||||||||| ||||||| |||| |||||  || | ||    | ||||    
T  25117412 taattcaacaccttgcctttgttactcggtgcttatcctcccgacctcaatatgcatccatgcccatcttgcattttcatttgtttcaccttcatcatgg 25117511  T
Q  136 tcatggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    |||||||||| ||| || | |||||| ||||||||||||||||||    
T  25117512 tcatggtgcttctcatcattgtgcaattgtgcaccttcctcttct 25117556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 36 - 180
Target Start/End: Original strand, 25176503 - 25176647
Alignment:
Q  36 taattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatgg 135  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||  | |||||||||| ||||||| |||| |||||  || | ||    | ||||    
T  25176503 taattcaacaccttgcctttgttactcggtgcttatcctcccgacctcaatatgcatccatgcccatcttgcattttcatttgtttcaccttcatcatgg 25176602  T
Q  136 tcatggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    |||||||||| ||| || | |||||| ||||||||||||||||||    
T  25176603 tcatggtgcttctcatcattgtgcaattgtgcaccttcctcttct 25176647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 37 - 180
Target Start/End: Complemental strand, 18071858 - 18071715
Alignment:
Q  37 aattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatggt 136  Q
    |||||||||||||||||| ||| || |||||||||||| |   ||||||| |||||||||| ||||||| |||| |||||  ||  ||| |  | |||||    
T  18071858 aattcaacaccttgccttagttgcttggtgcttatcctctagtcctcggtatgcatccatgcccatcttgcattttcatttgtttatccggcatcatggt 18071759  T
Q  137 catggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    ||||||||||||| || |||| ||| ||||||||||||||||||    
T  18071758 catggtgctcctcatcatggtacaattgtgcaccttcctcttct 18071715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 180
Target Start/End: Original strand, 20792050 - 20792193
Alignment:
Q  37 aattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatggt 136  Q
    |||||||||||||||||| ||| || |||||||||||| ||  |||| || |||||||||| ||||||| |||| |||||  ||  ||| |  | |||||    
T  20792050 aattcaacaccttgccttagtttcttggtgcttatcctctcggcctctgtatgcatccatgcccatcttgcattttcatttgtttatccggcatcatggt 20792149  T
Q  137 catggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    ||||||||||||  || |||| ||| ||||||||||||||||||    
T  20792150 catggtgctccttatcatggtacaattgtgcaccttcctcttct 20792193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 105
Target Start/End: Original strand, 24954446 - 24954512
Alignment:
Q  39 ttcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctt 105  Q
    |||||||||||||||||||| |||||||||||| ||||| ||||||||   |||||||| |||||||    
T  24954446 ttcaacaccttgcctttgttgctcggtgcttattctttcgacctcggtagtcatccatgcccatctt 24954512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 130 - 173
Target Start/End: Complemental strand, 15734400 - 15734357
Alignment:
Q  130 ttatggtcatggtgctcctcttcttggtgcaagtgtgcaccttc 173  Q
    |||||||||||| |||||||||| ||||||| ||||||||||||    
T  15734400 ttatggtcatggggctcctcttcatggtgcatgtgtgcaccttc 15734357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 18487319 - 18487402
Alignment:
Q  39 ttcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcc 122  Q
    |||||||||||| ||||||| |||||||| | | |||| ||| |||||||||||||||| ||| | ||||| || || ||||||    
T  18487319 ttcaacaccttgtctttgttgctcggtgcatgttctttgaacatcggtttgcatccatgcccaccgttcatcattatagtttcc 18487402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 22828015 - 22828098
Alignment:
Q  39 ttcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcc 122  Q
    |||||||||||| ||||||| |||||||| | | |||| ||| |||||||||||||||| ||| | ||||| || || ||||||    
T  22828015 ttcaacaccttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatccatgcccaccgttcatcattatagtttcc 22828098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 130 - 173
Target Start/End: Complemental strand, 23746917 - 23746874
Alignment:
Q  130 ttatggtcatggtgctcctcttcttggtgcaagtgtgcaccttc 173  Q
    ||||||||||||  ||||||||| ||||||||||||||||||||    
T  23746917 ttatggtcatgggtctcctcttcatggtgcaagtgtgcaccttc 23746874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 39 - 122
Target Start/End: Complemental strand, 24939488 - 24939405
Alignment:
Q  39 ttcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcc 122  Q
    |||||||||||| ||||||| |||||||| | | |||| ||| |||||||||||||||| ||| | ||||| || || ||||||    
T  24939488 ttcaacaccttgtctttgtttctcggtgcatgttctttgaacttcggtttgcatccatgcccaccgttcatcattatagtttcc 24939405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 21282166 - 21282224
Alignment:
Q  39 ttcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatg 97  Q
    |||||||||||| ||||||| |||||||| | | |||| ||| ||||||||||||||||    
T  21282166 ttcaacaccttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatccatg 21282224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 130 - 179
Target Start/End: Original strand, 22318832 - 22318881
Alignment:
Q  130 ttatggtcatggtgctcctcttcttggtgcaagtgtgcaccttcctcttc 179  Q
    |||||||||||| | |||||||| ||||||| || |||||||||||||||    
T  22318832 ttatggtcatggggttcctcttcatggtgcacgtttgcaccttcctcttc 22318881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 1e-37; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 14 - 181
Target Start/End: Complemental strand, 8651994 - 8651828
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatc 113  Q
    ||||||||||||  |||||  ||| |||||||| ||||||||||| ||||||||||||| ||||||||||||| |||||||||| |||||||||||| ||    
T  8651994 ggacatcatttcttagcccg-atagttcaacacattgcctttgttgctcggtgcttatcatttcaacctcggtgtgcatccatgcccatctttcattctc 8651896  T
Q  114 attgtttcctccagttttatggtcatggtgctcctcttcttggtgcaagtgtgcaccttcctcttctc 181  Q
    |||||||||||| |  |  | |||||||||||| || |  ||||||||||||||||||||||||||||    
T  8651895 attgtttcctccggcatcctcgtcatggtgctcatcataatggtgcaagtgtgcaccttcctcttctc 8651828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 39 - 173
Target Start/End: Original strand, 19876943 - 19877077
Alignment:
Q  39 ttcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatggtca 138  Q
    |||||||||||| ||||||| |||||||||||||||||  ||||| ||||||||||||| ||||||||||||  ||  ||||||||| || | |||||||    
T  19876943 ttcaacaccttgtctttgttgctcggtgcttatcctttggacctcagtttgcatccatgcccatctttcatttgcaaagtttcctccggtgtcatggtca 19877042  T
Q  139 tggtgctcctcttcttggtgcaagtgtgcaccttc 173  Q
    ||||||||||| || |||||||||| |||||||||    
T  19877043 tggtgctcctcatcatggtgcaagtttgcaccttc 19877077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 14 - 106
Target Start/End: Complemental strand, 20236451 - 20236359
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatcttt 106  Q
    ||||||||||||  |||||  |||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||| ||||||||    
T  20236451 ggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatcttt 20236359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 36 - 180
Target Start/End: Complemental strand, 20392440 - 20392296
Alignment:
Q  36 taattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatgg 135  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||| | | |||||||| ||||| | |||| |||||  || | ||    | ||||    
T  20392440 taattcaacaccttgcctttgttgctcggtgcttatcctttcgacctcgatattcatccatgcccatcgtgcattttcatttgtttcaccttcatcatgg 20392341  T
Q  136 tcatggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    | |||||||||||| || |||||||  ||||||||||||||||||    
T  20392340 ttatggtgctcctcatcatggtgcatttgtgcaccttcctcttct 20392296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 179
Target Start/End: Original strand, 20072205 - 20072341
Alignment:
Q  43 acaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatggtcatggt 142  Q
    |||||||||||||||| ||||||| ||||||| || |||||  | || ||||||| |||||||||||| | |||| |||||||    | | |||||||||    
T  20072205 acaccttgcctttgtttctcggtgtttatcctctctacctcattgtgtatccatgcccatctttcattgttattgattcctccgacatcagggtcatggt 20072304  T
Q  143 gctcctcttcttggtgcaagtgtgcaccttcctcttc 179  Q
    ||||||| | ||||||||  |||||||| ||| ||||    
T  20072305 gctcctcattttggtgcatttgtgcaccatccgcttc 20072341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 37 - 116
Target Start/End: Complemental strand, 3989035 - 3988956
Alignment:
Q  37 aattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcatt 116  Q
    |||||||||||||||||| ||| || |||||||||||| ||  ||||||| |||||||||| ||||||| |||| |||||    
T  3989035 aattcaacaccttgccttagttgcttggtgcttatcctctcggcctcggtatgcatccatgcccatcttgcattttcatt 3988956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 105
Target Start/End: Original strand, 21799943 - 21800009
Alignment:
Q  39 ttcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctt 105  Q
    |||||||||||||||||||| ||||||| |||| ||||||||||||||   |||||||| |||||||    
T  21799943 ttcaacaccttgcctttgttgctcggtgtttattctttcaacctcggtagtcatccatgcccatctt 21800009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 8948796 - 8948865
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctc 83  Q
    ||||||||||||| || ||  |||| |||||||||||||||||||  ||||||||||| || ||||||||    
T  8948796 ggacatcatttcgtagtccggataactcaacaccttgcctttgttgttcggtgcttattctctcaacctc 8948865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 176
Target Start/End: Complemental strand, 19783845 - 19783814
Alignment:
Q  145 tcctcttcttggtgcaagtgtgcaccttcctc 176  Q
    ||||||||||||||||||||||||||||||||    
T  19783845 tcctcttcttggtgcaagtgtgcaccttcctc 19783814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 21785699 - 21785782
Alignment:
Q  39 ttcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcc 122  Q
    |||||||||||| ||||||| |||||||| | | |||| ||| |||||||||||||||| ||| | ||||| || || ||||||    
T  21785699 ttcaacaccttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatccatgcccaccgttcatcattatagtttcc 21785782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 6e-36; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 14 - 182
Target Start/End: Complemental strand, 15864475 - 15864307
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatc 113  Q
    ||||||| ||||| || ||  |||||||||||||||| | ||||| ||| ||||||||||| ||||||||  | || |||||||||||||||| ||| ||    
T  15864475 ggacatcgtttcgtagtccggataattcaacaccttgtcattgttgctcagtgcttatcctctcaacctcattgtgtatccatgtccatcttttattttc 15864376  T
Q  114 attgtttcctccagttttatggtcatggtgctcctcttcttggtgcaagtgtgcaccttcctcttctcc 182  Q
    |||||| |||||||  | |||||||||||||||||| || |||||||| ||||||||||||||||||||    
T  15864375 attgttgcctccagcatcatggtcatggtgctcctcatcatggtgcaaatgtgcaccttcctcttctcc 15864307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 36 - 180
Target Start/End: Original strand, 15261352 - 15261496
Alignment:
Q  36 taattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatgg 135  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||| | |||||||| ||||||| |||| |||||  || | ||    | ||||    
T  15261352 taattcaacaccttgcctttgttgctcggtgcttatcctttcgacctcggtattcatccatgcccatcttgcattttcatttgtttcaccttcatcatgg 15261451  T
Q  136 tcatggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    |||||||||||||| || |||||||  ||||||||||||||||||    
T  15261452 tcatggtgctcctcatcatggtgcatttgtgcaccttcctcttct 15261496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 22109930 - 22109834
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    ||||||||||||  |||||  |||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  22109930 ggacatcatttcttagcccagataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatctttcatt 22109834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 15253316 - 15253219
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacct-cggtttgcatccatgtccatctttcatt 110  Q
    ||||||||||||  |||||  |||||||||||||||||||||||| |||||||||||||||||  |||| ||||||||||||||| | ||||||||||    
T  15253316 ggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctgcggtttgcatccatgccaatctttcatt 15253219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 37 - 180
Target Start/End: Complemental strand, 3353564 - 3353427
Alignment:
Q  37 aattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatggt 136  Q
    |||||||||||||||||||||| |||||| |||||||| || |||||||| |||||||||| ||||||| |||| |||||| || |      ||  |  |    
T  3353564 aattcaacaccttgcctttgttgctcggtacttatcctctcgacctcggtgtgcatccatgcccatcttgcattttcattggtttc------ttcgtcat 3353471  T
Q  137 catggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    ||||||||||||| || |||||||| ||||||||||||||||||    
T  3353470 catggtgctcctcatcatggtgcaattgtgcaccttcctcttct 3353427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 39 - 180
Target Start/End: Complemental strand, 13821854 - 13821713
Alignment:
Q  39 ttcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatggtca 138  Q
    |||||||||||||||||||| |||||||||||| ||||| ||||||||   |||||||| ||||||| |||  |||||  || | ||    ||| |||||    
T  13821854 ttcaacaccttgcctttgttgctcggtgcttattctttcgacctcggtagtcatccatgcccatcttgcatcttcatttgtttcaccttcattagggtca 13821755  T
Q  139 tggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    ||||| ||||| || |||||||  || |||||||||||||||    
T  13821754 tggtgttcctcatcatggtgcagttgagcaccttcctcttct 13821713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 143
Target Start/End: Original strand, 15349100 - 15349204
Alignment:
Q  39 ttcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatggtca 138  Q
    |||||||||||| ||||||| |||||||| | | |||| ||| |||||||||||||||| ||| | ||||| || || |||||| || | ||| || |||    
T  15349100 ttcaacaccttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatccatgcccaccgttcatcattatagtttccaccggctttttgttca 15349199  T
Q  139 tggtg 143  Q
    |||||    
T  15349200 tggtg 15349204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 11497869 - 11497952
Alignment:
Q  39 ttcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcc 122  Q
    |||||||||||| ||||||| |||||||| | | |||| ||| |||||||||||||||| ||| | ||||| || || ||||||    
T  11497869 ttcaacaccttgtctttgttgctcggtgcatgttctttgaacatcggtttgcatccatgcccaccgttcatcattatagtttcc 11497952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 39 - 122
Target Start/End: Complemental strand, 18290978 - 18290895
Alignment:
Q  39 ttcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcc 122  Q
    |||||||||||| | ||||| |||||||| | | |||| ||| |||||||||||||||| ||||| ||||| || || ||||||    
T  18290978 ttcaacaccttgtcattgttgctcggtgcatgttctttgaacttcggtttgcatccatgcccatcgttcatcattatagtttcc 18290895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0402 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 14 - 183
Target Start/End: Complemental strand, 6856 - 6687
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatc 113  Q
    ||||||||||||  |||||  ||||||||||| ||||| ||| || ||||||||||||| |||  ||||| |||| |||||||| | |||||||||| ||    
T  6856 ggacatcatttcttagcccgaataattcaacatcttgcttttattgctcggtgcttatcatttgtacctcagtttacatccatgccgatctttcattttc 6757  T
Q  114 attgtttcctccagttttatggtcatggtgctcctcttcttggtgcaagtgtgcaccttcctcttctcca 183  Q
    |  ||||||||| |  | |||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  6756 aaagtttcctccggcatcatggtcatggtgctcctcatcatggtgcaagtgtgcaccttcctcttctcca 6687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 37 - 180
Target Start/End: Complemental strand, 21829 - 21686
Alignment:
Q  37 aattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatggt 136  Q
    ||||||||||||| |||||||| ||||||||||||||| || |||||||| |||||||||| ||||||| |||| |||||| || |||| |  | |||||    
T  21829 aattcaacacctttcctttgttgctcggtgcttatcctctcgacctcggtatgcatccatgcccatcttgcattttcattggtttctccggcatcatggt 21730  T
Q  137 catggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    ||| ||||||||| || |||||||| ||||||||||||||||||    
T  21729 catagtgctcctcatcatggtgcaattgtgcaccttcctcttct 21686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1571 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold1571
Description:

Target: scaffold1571; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 1592 - 1496
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    ||||||||||||  |||||  |||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  1592 ggacatcatttcttagcccagataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatctttcatt 1496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 65; Significance: 9e-29; HSPs: 2)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 5076 - 4980
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    ||||||||||||  |||||  |||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  5076 ggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatctttcatt 4980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 130 - 173
Target Start/End: Complemental strand, 4972 - 4929
Alignment:
Q  130 ttatggtcatggtgctcctcttcttggtgcaagtgtgcaccttc 173  Q
    |||||||||||| |||||||||| ||||||| ||||||||||||    
T  4972 ttatggtcatggggctcctcttcatggtgcatgtgtgcaccttc 4929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 37 - 180
Target Start/End: Complemental strand, 1087 - 943
Alignment:
Q  37 aattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatcttt-cattatcattgtttcctccagttttatgg 135  Q
    |||||||||||||||||| ||| |||| ||||||||||  | |||||||| |||||||||| |||||||| |||| | |||| || |||| |  | ||||    
T  1087 aattcaacaccttgccttagttgctcgatgcttatcctcccgacctcggtatgcatccatgcccatctttgcatttttattggtttctccggcatcatgg 988  T
Q  136 tcatggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    |||||||||||||| || |||||||| ||||||||||||||||||    
T  987 tcatggtgctcctcatcatggtgcaattgtgcaccttcctcttct 943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 60; Significance: 9e-26; HSPs: 2)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 10366 - 10291
Alignment:
Q  35 ataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    |||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  10366 ataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatctttcatt 10291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 10283 - 10237
Alignment:
Q  130 ttatggtcatggtgctcctcttcttggtgcaagtgtgcaccttcctc 176  Q
    |||||||||||||||||||||||  |||||| || ||||||||||||    
T  10283 ttatggtcatggtgctcctcttcacggtgcacgtttgcaccttcctc 10237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 57; Significance: 5e-24; HSPs: 2)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 11499 - 11403
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    ||||||||||||  |||||  ||||||||||||||||||||||||  ||||||||||||||||  ||||||||||||||||||| ||||||| ||||    
T  11499 ggacatcatttcttagcccgaataattcaacaccttgcctttgttgttcggtgcttatcctttgtacctcggtttgcatccatgcccatcttgcatt 11403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 11393 - 11349
Alignment:
Q  132 atggtcatggtgctcctcttcttggtgcaagtgtgcaccttcctc 176  Q
    ||||||||| ||||||||||| ||||||||||||||||| |||||    
T  11393 atggtcatgatgctcctcttcatggtgcaagtgtgcaccgtcctc 11349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 37 - 180
Target Start/End: Original strand, 22260 - 22403
Alignment:
Q  37 aattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatggt 136  Q
    |||||||||||||||||| ||| || |||||||||||| ||  ||||||| |||||||||| ||||||| |||| |||||  ||  ||| |  | |||||    
T  22260 aattcaacaccttgccttagttgcttggtgcttatcctctcggcctcggtatgcatccatgcccatcttgcattttcatttgtttatccggcatcatggt 22359  T
Q  137 catggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    ||||||||||||| || |||| ||| ||||||||||||||||||    
T  22360 catggtgctcctcatcatggtacaattgtgcaccttcctcttct 22403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 55; Significance: 8e-23; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 38 - 180
Target Start/End: Original strand, 25655 - 25797
Alignment:
Q  38 attcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatggtc 137  Q
    |||||||||||||||||||||  |||||||||||||| || ||||| || |||||||||| ||||||| |||| |||||  || |||| |  | | ||||    
T  25655 attcaacaccttgcctttgttgttcggtgcttatcctctcgacctcagtatgcatccatgcccatcttgcattttcatttgtttctccggcatcacggtc 25754  T
Q  138 atggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    |||||||||||| || |||||||  ||||||||||| ||||||    
T  25755 atggtgctcctcatcatggtgcagttgtgcaccttcatcttct 25797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0974 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0974
Description:

Target: scaffold0974; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 14 - 107
Target Start/End: Complemental strand, 94 - 1
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttc 107  Q
    ||||||||||||  |||||  |||||||||||||||||||||||| |||||||||||||||||  ||||| ||||| ||||||| |||||||||    
T  94 ggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcagtttgtatccatgcccatctttc 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 36 - 116
Target Start/End: Complemental strand, 29442 - 29362
Alignment:
Q  36 taattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcatt 116  Q
    ||||||||||||||||||||||| ||||||||||||||| || |||||||| |||||||||| ||||||| |||| |||||    
T  29442 taattcaacaccttgcctttgttgctcggtgcttatcctctcgacctcggtatgcatccatgcccatcttgcattttcatt 29362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 36 - 180
Target Start/End: Complemental strand, 24518 - 24374
Alignment:
Q  36 taattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatgg 135  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||| || |||||||||  |||||||  ||| |||||  || | ||    | ||||    
T  24518 taattcaacaccttgcctttgttgctcggtgcttatcctttcgacctcagtatgcatccattcccatcttgtattttcatttgtttcaccttcatcatgg 24419  T
Q  136 tcatggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    | |||||||||||| || |||||||| |||||| |||||||||||    
T  24418 ttatggtgctcctcatcatggtgcaattgtgcatcttcctcttct 24374  T

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Target: scaffold0004 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 37 - 173
Target Start/End: Original strand, 19242 - 19378
Alignment:
Q  37 aattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatggt 136  Q
    |||||||||||||||||||||| ||||||||||||||| || |||||||  |||||||||| ||||||| |||| |||||  || |||| |  | | |||    
T  19242 aattcaacaccttgcctttgttgctcggtgcttatcctctcgacctcggcatgcatccatgcccatcttgcattttcatttgtttctccggcatcacggt 19341  T
Q  137 catggtgctcctcttcttggtgcaagtgtgcaccttc 173  Q
     ||| |||||||| || |||||||| |||||||||||    
T  19342 aatgatgctcctcatcatggtgcaattgtgcaccttc 19378  T

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Target: scaffold0004; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 253129 - 253197
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacct 82  Q
    |||||||||||  ||| ||  ||| |||||||||||||||||||| |||||||||||||||||||||||    
T  253129 ggacatcatttatgagtccggatagttcaacaccttgcctttgttgctcggtgcttatcctttcaacct 253197  T

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Target: scaffold0473 (Bit Score: 52; Significance: 5e-21; HSPs: 2)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 12987 - 12912
Alignment:
Q  35 ataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    |||||||||||||||| ||||||| |||||||||||||||||  ||||||||||||||||||| ||||||| ||||    
T  12987 ataattcaacaccttgtctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatcttacatt 12912  T

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Target: scaffold0473; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 179
Target Start/End: Complemental strand, 12904 - 12855
Alignment:
Q  130 ttatggtcatggtgctcctcttcttggtgcaagtgtgcaccttcctcttc 179  Q
    |||||||||||| |||||||||| ||||||| |||||||||||| |||||    
T  12904 ttatggtcatggggctcctcttcatggtgcatgtgtgcaccttcttcttc 12855  T

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Target: scaffold0230 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 37 - 180
Target Start/End: Complemental strand, 12428 - 12285
Alignment:
Q  37 aattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatggt 136  Q
    |||||||||| ||||||| ||| || |||||||||||| ||  ||||||| |||||||||| ||||||| |||| |||||  ||  ||| |  | |||||    
T  12428 aattcaacacattgccttagttgcttggtgcttatcctctcggcctcggtatgcatccatgcccatcttgcattttcatttgtttatccggaatcatggt 12329  T
Q  137 catggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    ||||||||||||| || |||| ||| ||||||||||||||||||    
T  12328 catggtgctcctcatcatggtacaattgtgcaccttcctcttct 12285  T

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Target: scaffold0231 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 39 - 111
Target Start/End: Complemental strand, 21863 - 21791
Alignment:
Q  39 ttcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatta 111  Q
    ||||||||||||||||||||  |||||||||||||| | |||||| ||||||||||||| |||||||||||||    
T  21863 ttcaacaccttgcctttgttgttcggtgcttatcctctgaacctccgtttgcatccatgcccatctttcatta 21791  T

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Target: scaffold0117 (Bit Score: 49; Significance: 3e-19; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 32822 - 32917
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    ||||||||||||  |||||  ||| |||||||||||||||| ||| |||||||||||||||||  ||||| ||||||||||||| ||||||||||||    
T  32822 ggacatcatttcttagcccggatagttcaacaccttgcctt-gttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt 32917  T

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Target: scaffold0117; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 132 - 173
Target Start/End: Original strand, 32927 - 32968
Alignment:
Q  132 atggtcatggtgctcctcttcttggtgcaagtgtgcaccttc 173  Q
    ||||||||||||| ||||||| |||||||||| |||||||||    
T  32927 atggtcatggtgcccctcttcatggtgcaagtttgcaccttc 32968  T

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Target: scaffold0020 (Bit Score: 49; Significance: 3e-19; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 115616 - 115521
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    ||||||||||||  |||||  |||||||||||||||||||| ||| |||||||||||||||||   ||||||||||||||||||  |||||||||||    
T  115616 ggacatcatttcttagcccggataattcaacaccttgcctt-gttgctcggtgcttatcctttgttcctcggtttgcatccatgctcatctttcatt 115521  T

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Target: scaffold0020; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 119920 - 119825
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    ||||||||||||  |||||  |||||||||||||||||||| ||| |||||||||||||||||   ||||||||||||||||||  |||||||||||    
T  119920 ggacatcatttcttagcccggataattcaacaccttgcctt-gttgctcggtgcttatcctttgttcctcggtttgcatccatgctcatctttcatt 119825  T

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Target: scaffold0506 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0506
Description:

Target: scaffold0506; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 116
Target Start/End: Original strand, 3323 - 3402
Alignment:
Q  37 aattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcatt 116  Q
    |||||||||||||||||||||| ||||||||||||||| ||  ||||||| |||||||||| ||||||| |||| |||||    
T  3323 aattcaacaccttgcctttgttgctcggtgcttatcctctcggcctcggtatgcatccatgcccatcttgcattttcatt 3402  T

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Target: scaffold0506; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 176
Target Start/End: Original strand, 3443 - 3474
Alignment:
Q  145 tcctcttcttggtgcaagtgtgcaccttcctc 176  Q
    ||||||||||||||||||||||||||||||||    
T  3443 tcctcttcttggtgcaagtgtgcaccttcctc 3474  T

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Target: scaffold0032 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 180
Target Start/End: Complemental strand, 90231 - 90088
Alignment:
Q  37 aattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatggt 136  Q
    |||||||||||||||||||||| ||||||| ||||||| ||  ||||||| |||||||||| ||||||| |||| |||||  |  |||     | |||||    
T  90231 aattcaacaccttgcctttgttgctcggtgtttatcctctcgtcctcggtatgcatccatgcccatcttgcattttcatttgtgtctctgtcatcatggt 90132  T
Q  137 catggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    ||||||| ||||| || || ||||| ||||||||||||||||||    
T  90131 catggtgttcctcatcatgctgcaattgtgcaccttcctcttct 90088  T

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Target: scaffold0029 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 180
Target Start/End: Complemental strand, 122319 - 122176
Alignment:
Q  37 aattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatggt 136  Q
    ||||||||||||| |||| ||| || |||||||||||  ||  ||||||| |||||||||| ||||||| |||| || ||  || |||  || | |||||    
T  122319 aattcaacaccttaccttagttgcttggtgcttatcccctcggcctcggtatgcatccatgcccatcttgcattttcgtttgtttctctggtatcatggt 122220  T
Q  137 catggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    ||||||||||||| || |||||||| ||| ||||||||||||||    
T  122219 catggtgctcctcatcctggtgcaattgtacaccttcctcttct 122176  T

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Target: scaffold1620 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold1620
Description:

Target: scaffold1620; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 46 - 110
Target Start/End: Original strand, 271 - 335
Alignment:
Q  46 ccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    ||||||||||||| |||||||||||||||||  ||||| ||||||||||||| ||||||||||||    
T  271 ccttgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt 335  T

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Target: scaffold0116 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 43 - 110
Target Start/End: Original strand, 39013 - 39080
Alignment:
Q  43 acaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    |||||||||||||||| ||||||||| |||||||  ||||| ||||||||||||| ||||||||||||    
T  39013 acaccttgcctttgttgctcggtgctaatcctttgtacctcagtttgcatccatgcccatctttcatt 39080  T

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Target: scaffold1879 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold1879
Description:

Target: scaffold1879; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 187 - 262
Alignment:
Q  35 ataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 110  Q
    ||||||| ||||||||||| |||| ||||||||| |||||||  |||||  |||||||||||| ||||||||||||    
T  187 ataattcgacaccttgcctctgttgctcggtgctaatcctttgtacctcattttgcatccatgcccatctttcatt 262  T

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Target: scaffold0018 (Bit Score: 38; Significance: 0.000000000001; HSPs: 3)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 180
Target Start/End: Original strand, 19579 - 19660
Alignment:
Q  99 ccatctttcattatcattgtttcctccagttttatggtcatggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    ||||||| |||| |||||| || |||| |  | |||||||||||||||||| || |||||||| ||||||||||||||||||    
T  19579 ccatcttgcattttcattggtttctccggcatcatggtcatggtgctcctcatcatggtgcaattgtgcaccttcctcttct 19660  T

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Target: scaffold0018; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 74
Target Start/End: Original strand, 19534 - 19573
Alignment:
Q  35 ataattcaacaccttgcctttgttactcggtgcttatcct 74  Q
    |||||||||||||||||||||| | |||||||||||||||    
T  19534 ataattcaacaccttgcctttgatgctcggtgcttatcct 19573  T

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Target: scaffold0018; HSP #3
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 176
Target Start/End: Original strand, 19652 - 19683
Alignment:
Q  145 tcctcttcttggtgcaagtgtgcaccttcctc 176  Q
    ||||||||||||||||||||||||||||||||    
T  19652 tcctcttcttggtgcaagtgtgcaccttcctc 19683  T

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Target: scaffold0215 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 176
Target Start/End: Original strand, 8228 - 8391
Alignment:
Q  14 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtg-cttatcctttcaacctcggtttgcatccatgtccatctttcattat 112  Q
    ||||||||||||  || ||  ||||| | |||||||||||||||| |||||||  ||||||| || |||||  | || ||||||| |||||||||||| |    
T  8228 ggacatcatttcttagtccggataatccgacaccttgcctttgttgctcggtgttttatcctctctacctcattgtgtatccatgcccatctttcattgt 8327  T
Q  113 cattgtttcctccagttttatggtcatggtgctcctcttcttggtgcaagtgtgcaccttcctc 176  Q
     |||| |||||||    | | |||||||||| ||||| | ||||||||  ||||||||||||||    
T  8328 tattgattcctccgacatcagggtcatggtgttcctcattttggtgcatttgtgcaccttcctc 8391  T

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Target: scaffold0566 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0566
Description:

Target: scaffold0566; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 39 - 122
Target Start/End: Complemental strand, 1565 - 1482
Alignment:
Q  39 ttcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcc 122  Q
    |||||||||||| ||||||| |||||||| | | |||| ||| |||||||||||||||| ||| | ||||| || || ||||||    
T  1565 ttcaacaccttgtctttgttgctcggtgcatgttctttgaacatcggtttgcatccatgcccaccgttcatcattatagtttcc 1482  T

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Target: scaffold0012 (Bit Score: 32; Significance: 0.000000004; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 8528 - 8611
Alignment:
Q  39 ttcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcc 122  Q
    |||||||||||| ||||||| |||||||| ||| |||| ||| | |||||||||||||| ||| | ||||| || || ||||||    
T  8528 ttcaacaccttgtctttgttgctcggtgcatattctttgaactttggtttgcatccatgcccaccgttcatcattatagtttcc 8611  T

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Target: scaffold0012; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 12700 - 12783
Alignment:
Q  39 ttcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcc 122  Q
    |||||||||||| ||||||| |||||||| ||| |||| ||| | |||||||||||||| ||| | ||||| || || ||||||    
T  12700 ttcaacaccttgtctttgttgctcggtgcatattctttgaactttggtttgcatccatgcccaccgttcatcattatagtttcc 12783  T

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Target: scaffold0273 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 24209 - 24161
Alignment:
Q  132 atggtcatggtgctcctcttcttggtgcaagtgtgcaccttcctcttct 180  Q
    ||||||||||||||||||  | |||||||| |||||||||||| |||||    
T  24209 atggtcatggtgctcctcagcatggtgcaattgtgcaccttccccttct 24161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 143
Target Start/End: Original strand, 51803 - 51907
Alignment:
Q  39 ttcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccagttttatggtca 138  Q
    |||||||||||| ||||||| |||||||| | | |||| ||| | |||||||||||||| ||| | ||||| || || |||||| || | ||| || |||    
T  51803 ttcaacaccttgtctttgttgctcggtgcatgttctttgaactttggtttgcatccatgcccaccgttcatcattatagtttccaccggatttttgttca 51902  T
Q  139 tggtg 143  Q
    |||||    
T  51903 tggtg 51907  T

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