View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8590_low_19 (Length: 332)

Name: NF8590_low_19
Description: NF8590
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8590_low_19
NF8590_low_19
[»] chr7 (15 HSPs)
chr7 (22-311)||(20229554-20229843)
chr7 (22-317)||(20262131-20262426)
chr7 (22-317)||(20241498-20241793)
chr7 (135-317)||(20092081-20092263)
chr7 (22-321)||(20292503-20292802)
chr7 (35-317)||(20271700-20271982)
chr7 (36-317)||(20064416-20064697)
chr7 (30-317)||(20301709-20301996)
chr7 (23-240)||(20169944-20170164)
chr7 (22-140)||(20090902-20091020)
chr7 (37-177)||(20277584-20277724)
chr7 (206-317)||(20296933-20297044)
chr7 (36-322)||(20282009-20282301)
chr7 (140-240)||(20172057-20172157)
chr7 (101-222)||(20287231-20287352)
[»] chr4 (2 HSPs)
chr4 (22-321)||(40821040-40821339)
chr4 (101-265)||(40825786-40825950)


Alignment Details
Target: chr7 (Bit Score: 262; Significance: 1e-146; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 22 - 311
Target Start/End: Complemental strand, 20229843 - 20229554
Alignment:
Q  22 gcgccaacatggccgagtttcattccaaataaacacttcaaatatattttggcgttgaacgctattacaagagaagttgccaacagaggggtcagaaggg 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20229843 gcgccaacatggccgagtttcattccaaataaacacttcaaatatattttggcgttgaacgctattacaagagaagttgccaacagaggggtcagaaggg 20229744  T
Q  122 cttttccatgatgtgagttttatactcttaccggttcttttgctgactgaaagtttcatgcctggaaggaatgtatctgaaggctgctgaaaactctgcc 221  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20229743 cttttccatgatgtgagttttatactcttaccagttcttttgttgactgaaagtttcatgcctggaaggaatgtatctgaaggctgctgaaaactctgcc 20229644  T
Q  222 ataagttgtttccagttgtgctctccagaagcacaaggttaccaaagtcagacatttgggaagtggtattcgttgctatgttggaaacat 311  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| | | |||||||||||||||    
T  20229643 ataagttgtttccagttgtgctctccagaagcacaaggttaccagagtcagacatttgggaggtggtattggatactatgttggaaacat 20229554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 22 - 317
Target Start/End: Complemental strand, 20262426 - 20262131
Alignment:
Q  22 gcgccaacatggccgagtttcattccaaataaacacttcaaatatattttggcgttgaacgctattacaagagaagttgccaacagaggggtcagaaggg 121  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  20262426 gcgccaacatggtcgagtttcattccaaataaacacttcaaatatattttggcgttcaacgctattacaagagaagttgccaacagaggggtcagaaggg 20262327  T
Q  122 cttttccatgatgtgagttttatactcttaccggttcttttgctgactgaaagtttcatgcctggaaggaatgtatctgaaggctgctgaaaactctgcc 221  Q
    |||||||||||||||||||||| ||||||||| ||||||||| ||| ||||| |||||||  ||||||||||||||||||||||||||||| ||||||||    
T  20262326 cttttccatgatgtgagttttaaactcttacccgttcttttgttgattgaaactttcatgtttggaaggaatgtatctgaaggctgctgaatactctgcc 20262227  T
Q  222 ataagttgtttccagttgtgctctccagaagcacaaggttaccaaagtcagacatttgggaagtggtattcgttgctatgttggaaacatttgatg 317  Q
    ||||  ||||||| |||||| |||||||||||||||||||||| ||  | || |  || ||| | ||||| |||| ||||||||||||||||||||    
T  20262226 ataaaatgtttccggttgtgttctccagaagcacaaggttaccgaaacccgaaaagtgagaacttgtatttgttgttatgttggaaacatttgatg 20262131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 22 - 317
Target Start/End: Complemental strand, 20241793 - 20241498
Alignment:
Q  22 gcgccaacatggccgagtttcattccaaataaacacttcaaatatattttggcgttgaacgctattacaagagaagttgccaacagaggggtcagaaggg 121  Q
    ||||||| ||||||||||| ||||||||||||||||||||| |||| || |||||| |||  || ||  |||||||||||||||||||||||||||||||    
T  20241793 gcgccaaaatggccgagttccattccaaataaacacttcaagtatacttaggcgttcaacagtactagcagagaagttgccaacagaggggtcagaaggg 20241694  T
Q  122 cttttccatgatgtgagttttatactcttaccggttcttttgctgactgaaagtttcatgcctggaaggaatgtatctgaaggctgctgaaaactctgcc 221  Q
    |||||||||||||||||||||  | ||||||||||||||||| ||  ||||| |||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  20241693 cttttccatgatgtgagtttttcattcttaccggttcttttgttgtttgaaattttcattcctggaaggaatgtatctgaaggctgcagaatactctgcc 20241594  T
Q  222 ataagttgtttccagttgtgctctccagaagcacaaggttaccaaagtcagacatttgggaagtggtattcgttgctatgttggaaacatttgatg 317  Q
    ||||||| ||||| |||||| |||||||||||||||||||||| ||  | || |     ||| | ||||| |||||||||||||||||||||||||    
T  20241593 ataagttttttccggttgtgttctccagaagcacaaggttaccgaaacccgaaaagcaagaacttgtatttgttgctatgttggaaacatttgatg 20241498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 135 - 317
Target Start/End: Original strand, 20092081 - 20092263
Alignment:
Q  135 tgagttttatactcttaccggttcttttgctgactgaaagtttcatgcctggaaggaatgtatctgaaggctgctgaaaactctgccataagttgtttcc 234  Q
    ||||||||||||| ||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  20092081 tgagttttatacttttacctgttcttttgttgattgaaagtttcatgcctggaaggaatgtatctgaaggctgctgaatactctgccatatgttgtttcc 20092180  T
Q  235 agttgtgctctccagaagcacaaggttaccaaagtcagacatttgggaagtggtattcgttgctatgttggaaacatttgatg 317  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||| | |||||||||||||||||||||||    
T  20092181 agttgtgctctcctgaagcacaaggttaccaaagtcagaaattcgggaagtggtattggatgctatgttggaaacatttgatg 20092263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 22 - 321
Target Start/End: Complemental strand, 20292802 - 20292503
Alignment:
Q  22 gcgccaacatggccgagtttcattccaaataaacacttcaaatatattttggcgttgaacgctattacaagagaagttgccaacagaggggtcagaaggg 121  Q
    ||||||| ||||  ||||| ||||||||||||||||||| |  |||||| |||||| |||  |  ||||||| |||||||||||| | ||||| ||||||    
T  20292802 gcgccaatatggttgagttccattccaaataaacacttcgataatatttaggcgttcaactgtcctacaagaaaagttgccaacatatgggtccgaaggg 20292703  T
Q  122 cttttccatgatgtgagttttatactcttaccggttcttttgctgactgaaagtttcatgcctggaaggaatgtatctgaaggctgctgaaaactctgcc 221  Q
    |||||||||||| ||||||||| | ||||||| ||||||| | ||| ||| ||||||||||  ||||| || ||||||||||| ||||||| ||||||||    
T  20292702 cttttccatgatatgagttttacattcttacctgttctttggttgattgatagtttcatgctaggaagtaacgtatctgaaggttgctgaatactctgcc 20292603  T
Q  222 ataagttgtttccagttgtgctctccagaagcacaaggttaccaaagtcagacatttgggaagtggtattcgttgctatgttggaaacatttgatgtcca 321  Q
    ||||  || |||||||||||||||||| ||| ||||||||||||||||| || |  || ||| | ||||| |||||||||||||| ||||||||||||||    
T  20292602 ataaaatggttccagttgtgctctccaaaaggacaaggttaccaaagtcggaaaactgagaacttgtattggttgctatgttggagacatttgatgtcca 20292503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 35 - 317
Target Start/End: Complemental strand, 20271982 - 20271700
Alignment:
Q  35 cgagtttcattccaaataaacacttcaaatatattttggcgttgaacgctattacaagagaagttgccaacagaggggtcagaagggcttttccatgatg 134  Q
    ||||||||||||||||| ||||||||   ||||| |||||||| ||   || || |||||||||| || |  || |||||||||||  |||||||||||     
T  20271982 cgagtttcattccaaatgaacacttcgtgtatatgttggcgttcaatagtactagaagagaagtttccgatggatgggtcagaaggatttttccatgatt 20271883  T
Q  135 tgagttttatactcttaccggttcttttgctgactgaaagtttcatgcctggaaggaatgtatctgaaggctgctgaaaactctgccataagttgtttcc 234  Q
    | | ||||| |||| |||| ||||||||| |||| ||||||||||| || || || |||||||||| ||| ||||||| ||||||||||||| |||||||    
T  20271882 tcatttttacactcatacctgttcttttgttgacagaaagtttcataccaggcagtaatgtatctgtaggttgctgaatactctgccataaggtgtttcc 20271783  T
Q  235 agttgtgctctccagaagcacaaggttaccaaagtcagacatttgggaagtggtattcgttgctatgttggaaacatttgatg 317  Q
     ||||||||||||| ||| |||||||| ||| |||| || |  || ||||||||||| | |||||||||||||||||||||||    
T  20271782 ggttgtgctctccaaaaggacaaggttgccatagtctgaaaactgcgaagtggtattggatgctatgttggaaacatttgatg 20271700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 36 - 317
Target Start/End: Original strand, 20064416 - 20064697
Alignment:
Q  36 gagtttcattccaaataaacacttcaaatatattttggcgttgaacgctattacaagagaagttgccaacagaggggtcagaagggcttttccatgatgt 135  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||| ||| || | |||||  | |||||||| || || ||||| |||||||||||| |    
T  20064416 gagtttcattccaaataaacacttcaagtatattttggcgttcaacactactagaggagaaactcccaacagatggatcggaaggacttttccatgatct 20064515  T
Q  136 gagttttatactcttaccggttcttttgctgactgaaagtttcatgcctggaaggaatgtatctgaaggctgctgaaaactctgccataagttgtttcca 235  Q
     ||||||    ||| ||| ||||||||| |||  ||||||||||| || || || |||| ||| ||||| | ||||| ||||||||||||| |||||||     
T  20064516 tagttttgatttctcacctgttcttttgttgatagaaagtttcataccaggcagtaatgaatcagaaggttcctgaatactctgccataagatgtttcct 20064615  T
Q  236 gttgtgctctccagaagcacaaggttaccaaagtcagacatttgggaagtggtattcgttgctatgttggaaacatttgatg 317  Q
    |||||||| |||| ||| |||||||| |||  ||| || |  |||||||||||||| | | |||||||||||||||||||||    
T  20064616 gttgtgctatccaaaaggacaaggtttccatggtccgaaaactgggaagtggtattggattctatgttggaaacatttgatg 20064697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 30 - 317
Target Start/End: Complemental strand, 20301996 - 20301709
Alignment:
Q  30 atggccgagtttcattccaaataaacacttcaaatatattttggcgttgaacgctattacaagagaagttgccaacagaggggtcagaagggcttttcca 129  Q
    |||| |||||||||||||||||||||||||||| |||||||  ||||| ||| ||| || |||| ||  | || ||||| || |||||||||||||||||    
T  20301996 atggtcgagtttcattccaaataaacacttcaagtatatttccgcgttcaacactactagaagaaaaaatcccgacagatggatcagaagggcttttcca 20301897  T
Q  130 tgatgtgagttttatactcttaccggttcttttgctgactgaaagtttcatgcctggaaggaatgtatctgaaggctgctgaaaactctgccataagttg 229  Q
    |||||| ||||||    | | ||| ||||||||| |||  ||||||||||| || |  || |||||||||| ||| || |||| ||||||||||||   |    
T  20301896 tgatgttagttttgatttttcacctgttcttttgttgatagaaagtttcataccagacagtaatgtatctgtaggttgttgaatactctgccataatacg 20301797  T
Q  230 tttccagttgtgctctccagaagcacaaggttaccaaagtcagacatttgggaagtggtattcgttgctatgttggaaacatttgatg 317  Q
    |||||||||| | |||||| ||| |||||||| ||| |||| || |  || ||| | ||||| |||||||||||||||||||||||||    
T  20301796 tttccagttgcgttctccaaaaggacaaggttgccatagtctgaaaactgagaacttgtatttgttgctatgttggaaacatttgatg 20301709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 23 - 240
Target Start/End: Original strand, 20169944 - 20170164
Alignment:
Q  23 cgccaacatggccgagtttcattccaaataaacacttcaaatatattttgg---cgttgaacgctattacaagagaagttgccaacagaggggtcagaag 119  Q
    |||||| |||| ||| || |||||||||| |||||||||| ||||||| ||   |||| ||   || ||| | |||||||||||||||| ||||||||||    
T  20169944 cgccaatatggtcgacttccattccaaatgaacacttcaattatatttggggggcgttcaaaaatactactatagaagttgccaacagatgggtcagaag 20170043  T
Q  120 ggcttttccatgatgtgagttttatactcttaccggttcttttgctgactgaaagtttcatgcctggaaggaatgtatctgaaggctgctgaaaactctg 219  Q
    |||||||||||| |  ||| |||| ||||||||  ||||||||| ||| |||||| ||||| |  || || |||||||||| ||| ||||||| ||| ||    
T  20170044 ggcttttccatgcttcgagatttacactcttacttgttcttttgttgattgaaagcttcatactaggcagtaatgtatctgtaggttgctgaatactttg 20170143  T
Q  220 ccataagttgtttccagttgt 240  Q
    ||||||  |||||||||||||    
T  20170144 ccataaaatgtttccagttgt 20170164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 140
Target Start/End: Original strand, 20090902 - 20091020
Alignment:
Q  22 gcgccaacatggccgagtttcattccaaataaacacttcaaatatattttggcgttgaacgctattacaagagaagttgccaacagaggggtcagaaggg 121  Q
    ||||||||||||| |||||||||||||||| |||| ||||| ||||||| |||||| |||  || || |||||||||||||||  |  |||| ||||| |    
T  20090902 gcgccaacatggctgagtttcattccaaatgaacagttcaagtatatttaggcgttcaacagtactagaagagaagttgccaatggcagggttagaagag 20091001  T
Q  122 cttttccatgatgtgagtt 140  Q
    ||||||||||| |||||||    
T  20091002 cttttccatgacgtgagtt 20091020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 37 - 177
Target Start/End: Complemental strand, 20277724 - 20277584
Alignment:
Q  37 agtttcattccaaataaacacttcaaatatattttggcgttgaacgctattacaagagaagttgccaacagaggggtcagaagggcttttccatgatgtg 136  Q
    ||||||||||||||| |||||||| | ||||  |  ||||| |||  || ||||||| ||||||||||  || || ||| ||||||||||||||||| ||    
T  20277724 agtttcattccaaatgaacacttctattatacgtaagcgttcaacagtactacaagaaaagttgccaatggatggatcaaaagggcttttccatgatttg 20277625  T
Q  137 agttttatactcttaccggttcttttgctgactgaaagttt 177  Q
    ||||||| ||||||||| ||||||||| ||| ||| |||||    
T  20277624 agttttacactcttacctgttcttttgttgattgatagttt 20277584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 206 - 317
Target Start/End: Complemental strand, 20297044 - 20296933
Alignment:
Q  206 tgctgaaaactctgccataagttgtttccagttgtgctctccagaagcacaaggttaccaaagtcagacatttgggaagtggtattcgttgctatgttgg 305  Q
    ||||||| ||||| ||||||  | |||| |||||||||||||| ||| ||||||||||||||||| || | |||  || | ||| | |||||||||||||    
T  20297044 tgctgaatactctcccataacatatttctagttgtgctctccaaaaggacaaggttaccaaagtctgaaaattgaaaacttgtaattgttgctatgttgg 20296945  T
Q  306 aaacatttgatg 317  Q
    ||||||||||||    
T  20296944 aaacatttgatg 20296933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 36 - 322
Target Start/End: Complemental strand, 20282301 - 20282009
Alignment:
Q  36 gagtttcattccaaataaacacttcaaatatattttggcgttgaacgctattacaagagaagttgccaacagaggggtcagaagggcttttccatgatgt 135  Q
    |||||||||||||||| |||||||||| ||||  | |||||| |||  || ||||||| |||||  ||   ||  | ||| |||| |||||||||||| |    
T  20282301 gagtttcattccaaatgaacacttcaattatacgtaggcgttcaacagtactacaagaaaagttatcagtggatcgatcaaaaggacttttccatgattt 20282202  T
Q  136 gagttttatactcttaccggttcttttgctgactgaaagtttcatgcctggaaggaa-----tgt--atctgaaggctgctgaaaactctgccataagtt 228  Q
    |||||||| |||||| || ||||||||| |||  || ||||||||||  ||  | ||     |||  ||| ||||| ||||||| | | ||||||||  |    
T  20282201 gagttttacactcttgcctgttcttttgttgatcgatagtttcatgctaggctgtaataatttgttgatc-gaaggttgctgaataatttgccataaaat 20282103  T
Q  229 gtttccagttgtgctctccagaagcacaaggttaccaaagtcagacatttgggaagtggtattcgttgctatgttggaaacatttgatgtccat 322  Q
    ||||||||||||  | |||| ||| ||||||||||||||||| || |  || ||| | ||||| |||||||||||||||||||| |||| ||||    
T  20282102 gtttccagttgtaatatccaaaaggacaaggttaccaaagtctgaaaactgagaacttgtatttgttgctatgttggaaacattcgatgaccat 20282009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 240
Target Start/End: Original strand, 20172057 - 20172157
Alignment:
Q  140 tttatactcttaccggttcttttgctgactgaaagtttcatgcctggaaggaatgtatctgaaggctgctgaaaactctgccataagttgtttccagttg 239  Q
    |||| ||||||||  ||||||||| ||| |||||| ||||| |  || || |||||||||| ||| ||||||| ||| ||||||||  ||||||||||||    
T  20172057 tttacactcttacttgttcttttgttgattgaaagcttcatactaggcagtaatgtatctgtaggttgctgaatactttgccataaaatgtttccagttg 20172156  T
Q  240 t 240  Q
    |    
T  20172157 t 20172157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 222
Target Start/End: Complemental strand, 20287352 - 20287231
Alignment:
Q  101 ccaacagaggggtcagaagggcttttccatgatgtgagttttatactcttaccggttcttttgctgactgaaagtttcatgcctggaaggaatgtatctg 200  Q
    |||||||| || || |||||| |||||||||||||||||| ||   ||| ||| ||||||||| |   || ||||||||| ||||| || ||||||||      
T  20287352 ccaacagatggatctgaagggtttttccatgatgtgagttgtactttctcacctgttcttttgtttcttgtaagtttcatacctggtagaaatgtatcaa 20287253  T
Q  201 aaggctgctgaaaactctgcca 222  Q
    |||| |  ||||||||||||||    
T  20287252 aaggtttttgaaaactctgcca 20287231  T

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Target: chr4 (Bit Score: 108; Significance: 3e-54; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 22 - 321
Target Start/End: Original strand, 40821040 - 40821339
Alignment:
Q  22 gcgccaacatggccgagtttcattccaaataaacacttcaaatatattttggcgttgaacgctattacaagagaagttgccaacagaggggtcagaaggg 121  Q
    |||| |||||||  ||||| |||||||||| |||||||||| ||||||| |||||| |||  |  || ||||||||||||| ||| | ||||| ||||||    
T  40821040 gcgctaacatggttgagttccattccaaatgaacacttcaattatatttaggcgttcaactgtcctaaaagagaagttgccgacatatgggtccgaaggg 40821139  T
Q  122 cttttccatgatgtgagttttatactcttaccggttcttttgctgactgaaagtttcatgcctggaaggaatgtatctgaaggctgctgaaaactctgcc 221  Q
    |||||||||||| ||||||||| | ||||||| ||||||||| ||| ||| | ||||||||  || || || ||||||||||| ||||||| ||||| ||    
T  40821140 cttttccatgatatgagttttacattcttacctgttcttttgttgattgatattttcatgctaggtagtaacgtatctgaaggttgctgaatactctacc 40821239  T
Q  222 ataagttgtttccagttgtgctctccagaagcacaaggttaccaaagtcagacatttgggaagtggtattcgttgctatgttggaaacatttgatgtcca 321  Q
    ||||  ||||||||||||| ||||||| ||| ||||||||||||||||  || |  || ||| | ||||| | |||||||||||||||||||||||||||    
T  40821240 ataaaatgtttccagttgtactctccaaaaggacaaggttaccaaagtttgaaaactgagaacttgtattggatgctatgttggaaacatttgatgtcca 40821339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 101 - 265
Target Start/End: Original strand, 40825786 - 40825950
Alignment:
Q  101 ccaacagaggggtcagaagggcttttccatgatgtgagttttatactcttaccggttcttttgctgactgaaagtttcatgcctggaaggaatgtatctg 200  Q
    |||||||| || || |||||| |||||||||||||||||| ||   ||| ||| ||||||||| ||  || ||||||||||||||| || | |||||| |    
T  40825786 ccaacagatggatctgaagggtttttccatgatgtgagttgtactttctcacctgttcttttgttgcttgtaagtttcatgcctggcagaagtgtatccg 40825885  T
Q  201 aaggctgctgaaaactctgccataagttgtttccagttgtgctctccagaagcacaaggttacca 265  Q
    |||| | ||||||||||||||| ||| || |||| |||||||| |||| ||| ||||||||||||    
T  40825886 aaggtttctgaaaactctgccacaagatgcttcctgttgtgctttccaaaaggacaaggttacca 40825950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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