View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8590_low_21 (Length: 325)
Name: NF8590_low_21
Description: NF8590
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8590_low_21 |
 | |
|
| [»] scaffold0113 (1 HSPs) |
| | |
|
| [»] scaffold0018 (1 HSPs) |
| | |
|
| [»] scaffold0045 (1 HSPs) |
| | |
|
| [»] scaffold0171 (1 HSPs) |
| | |
|
| [»] scaffold0220 (1 HSPs) |
| | |
|
| [»] scaffold0140 (1 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 195; Significance: 1e-106; HSPs: 11)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 27451445 - 27451195
Alignment:
| Q |
1 |
gcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataact |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |
|
|
| T |
27451445 |
gcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaagagactcatgttacggataact |
27451346 |
T |
|
| Q |
101 |
tatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagt |
200 |
Q |
| |
|
||||||||||||| ||| |||||||||||||||||| ||||||||||||| ||||| ||| |||||||||||| || ||||||||||||||||||||||| |
|
|
| T |
27451345 |
tatttggttttattcctcggaggtcgactatggaagcgaactacttactttgacgcatgatggagcgatatcggacggataaaaaagacttgcaattagt |
27451246 |
T |
|
| Q |
201 |
tttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
251 |
Q |
| |
|
|||||||||||||| ||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
27451245 |
tttcacttatttggagaaggcgtaggatagagtacttagagagattttgtg |
27451195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 23907574 - 23907324
Alignment:
| Q |
1 |
gcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataact |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||||||||||||| |||||| |||| ||||| |
|
|
| T |
23907574 |
gcgaattataggggaattaagctaatgagtcataccataaagttatgggaaagggtgatcgaaagaagactaagaaaggagactcgagttacggataatc |
23907475 |
T |
|
| Q |
101 |
tatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
23907474 |
aatttggttttatgcctgggaggtcgactatggaagcaatctacttacttcgacgcgtgatggagcgatatcgaacggataaaaaagacttgcacttagt |
23907375 |
T |
|
| Q |
201 |
tttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
251 |
Q |
| |
|
||||| | |||||| |||||||||||||||||||| |||||||||||||| |
|
|
| T |
23907374 |
tttcattgatttggaaaaggcgtatgatagagtaccaagagagattttgtg |
23907324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 48623799 - 48623549
Alignment:
| Q |
1 |
gcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataact |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||| |||||| |||| ||||||| |
|
|
| T |
48623799 |
gcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtgatcgaaagaagactaagaaagaagactcgagttacagataacc |
48623700 |
T |
|
| Q |
101 |
tatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||| |||||||||| | || ||||||||||||||||| ||||| |
|
|
| T |
48623699 |
aatttggttttatgcctgggaggtcgactatggaagcaatctacttagttcgacgcgtgatggagcgatataggacggataaaaaagacttgcacttagt |
48623600 |
T |
|
| Q |
201 |
tttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
251 |
Q |
| |
|
||||| | |||||| |||| ||||||||||||||| |||||||||||||| |
|
|
| T |
48623599 |
tttcattgatttggaaaaggtgtatgatagagtaccgagagagattttgtg |
48623549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 26 - 251
Target Start/End: Original strand, 435267 - 435492
Alignment:
| Q |
26 |
tgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataacttatttggttttatgcctgggaggtc |
125 |
Q |
| |
|
||||||||||||||||||||||||||||||| || || ||||||||||||| || ||| |||| |||||| ||||||||||||||||||||||| |
|
|
| T |
435267 |
tgagtcataccatgaagttatgggaaagggtgatcgaaagaagactaagaaaggaggctcgagttacggataaccaatttggttttatgcctgggaggtt |
435366 |
T |
|
| Q |
126 |
gactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagttttcacttatttggggaaggcgtat |
225 |
Q |
| |
|
||||||||||| | |||||||||||||||||||| ||||||||||| || ||||||||||||||||| |||||||||| | |||||| ||| ||||| |
|
|
| T |
435367 |
gactatggaagcaatctacttacttcgacgcgtgatagagcgatatcggacggataaaaaagacttgcacttagttttcattgatttggaaaagacgtat |
435466 |
T |
|
| Q |
226 |
gatagagtacctagagagattttgtg |
251 |
Q |
| |
|
||||||||||| |||||||||||||| |
|
|
| T |
435467 |
gatagagtaccgagagagattttgtg |
435492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 1778289 - 1778038
Alignment:
| Q |
1 |
gcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataact |
100 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||| | |||||||||||||| || || ||||||||||||| |||||| |||| |||||| |
|
|
| T |
1778289 |
gcgaattataggagaattaagctaatgagtcataccatggaattatgggaaagggtgatcgaaagaagactaagaaaggagactcgagttacggataacc |
1778190 |
T |
|
| Q |
101 |
tatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagt |
200 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||||| | ||||||||||||||| |||| |||||||||||| || ||||||||| ||||||| ||||| |
|
|
| T |
1778189 |
aatttgattttatgcctgggaggttgactatggaagcaatctacttacttcgacgtgtgatggagcgatatcggacggataaaaaaaacttgcacttagt |
1778090 |
T |
|
| Q |
201 |
tttcacttatttgg-ggaaggcgtatgatagagtacctagagagattttgtg |
251 |
Q |
| |
|
||||| | |||||| |||| ||||||||||||| | |||||||||||||| |
|
|
| T |
1778089 |
tttcattgatttggaaaaaggtgtatgatagagtatcaagagagattttgtg |
1778038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 37 - 251
Target Start/End: Original strand, 53703655 - 53703870
Alignment:
| Q |
37 |
atgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataacttatttggttttatgcctgggaggtcgactatggaag |
136 |
Q |
| |
|
|||||||||||||||||||| || || ||||||||||||| |||||| |||| ||||||| | ||| ||||||| ||| ||||||||||||||||| |
|
|
| T |
53703655 |
atgaagttatgggaaagggtgatcgaaagaagactaagaaaggagactcgggttacagataaccaaattgattttatgtctgagaggtcgactatggaag |
53703754 |
T |
|
| Q |
137 |
tgaactacttacttcgacgcgtgagggagcgatatcgaacagat-aaaaaagacttgcaattagttttcacttatttggggaaggcgtatgatagagtac |
235 |
Q |
| |
|
| |||||||||||||||||||| |||||||||||| || ||| ||||| |||||||| |||||||||||| |||||| |||||||||||| |||||| |
|
|
| T |
53703755 |
caatctacttacttcgacgcgtgacggagcgatatcggacggatgaaaaaggacttgcacttagttttcactgatttggaaaaggcgtatgattgagtac |
53703854 |
T |
|
| Q |
236 |
ctagagagattttgtg |
251 |
Q |
| |
|
| |||||||||||||| |
|
|
| T |
53703855 |
cgagagagattttgtg |
53703870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 4 - 252
Target Start/End: Original strand, 39707477 - 39707725
Alignment:
| Q |
4 |
aattataggggaattaagctaatgagtcataccatgaagttatgggaaag-ggtaattgagcgaagactaagaaaatagactcatgttaaagataactta |
102 |
Q |
| |
|
|||||||| |||||||| ||||||||||||||||||||||||| ||||| ||| ||||| ||||||||||||||| | | || ||| ||||| | |
|
|
| T |
39707477 |
aattatagaggaattaaactaatgagtcataccatgaagttataggaaaaaggtgattgaacgaagactaagaaaagaaagtcgatttacgaataaccaa |
39707576 |
T |
|
| Q |
103 |
tttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagttt |
202 |
Q |
| |
|
||| ||||||||||||| || | ||||| | ||| || |||||||||||||| |||| ||||||||| | || ||||||||||||||||| ||||||| |
|
|
| T |
39707577 |
ttttgttttatgcctgg-agattgactacgaaagcgatttacttacttcgacgtgtgatggagcgataacagacggataaaaaagacttgcacttagttt |
39707675 |
T |
|
| Q |
203 |
tcacttatttggggaaggcgtatgatagagtacctagagagattttgtga |
252 |
Q |
| |
|
||| | |||||| |||| ||||||||||||| ||||||||| |||||||| |
|
|
| T |
39707676 |
tcattgatttggagaagacgtatgatagagtgcctagagaggttttgtga |
39707725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 252 - 311
Target Start/End: Complemental strand, 27446818 - 27446759
Alignment:
| Q |
252 |
acaaatctctttcatttctccaagtcagtcatctactctaaaaccttgtgattcttgatg |
311 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27446818 |
acaaatctctttcatttctccaagtcagtcatctactctaaaaccttgtgattcttgatg |
27446759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 16001213 - 16001137
Alignment:
| Q |
3 |
gaattataggggaattaagct-aatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaa |
78 |
Q |
| |
|
|||||||||| ||||||| | |||||||||||| |||||||||||||||||||| ||| | ||||||||||||||| |
|
|
| T |
16001213 |
gaattataggagaattaaaattaatgagtcatactatgaagttatgggaaagggtgatttaacgaagactaagaaaa |
16001137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 56224776 - 56224835
Alignment:
| Q |
4 |
aattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgag |
63 |
Q |
| |
|
|||||||| |||||||| |||||||||||| ||||||||| ||||||| |||||||||| |
|
|
| T |
56224776 |
aattatagaggaattaaactaatgagtcatgtcatgaagttgtgggaaatggtaattgag |
56224835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 246
Target Start/End: Original strand, 2296364 - 2296429
Alignment:
| Q |
181 |
aaaaaagacttgcaattagttttcacttatttggggaaggcgtatgatagagtacctagagagatt |
246 |
Q |
| |
|
|||||||||||||| |||||||||| | |||||| ||||| ||| ||||||| |||| ||||||| |
|
|
| T |
2296364 |
aaaaaagacttgcacttagttttcattgatttggagaaggtgtacaatagagttcctaaagagatt |
2296429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 156; Significance: 7e-83; HSPs: 10)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 45368898 - 45368651
Alignment:
| Q |
1 |
gcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataact |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||| |||||| |
|
|
| T |
45368898 |
gcgaattataggggaattaagctaatgagtcataccatgaaattatgggaaagggtaattgaacgaagactaagaaaagagactcatgttacggataacc |
45368799 |
T |
|
| Q |
101 |
tatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagt |
200 |
Q |
| |
|
|||||| |||||||||||||||| ||||||||||| || ||||||||||||||||||| |||||||||||| || |||||||| |||| || ||||| |
|
|
| T |
45368798 |
aatttggctttatgcctgggaggttgactatggaagcgatatacttacttcgacgcgtgatggagcgatatcggacggataaaaagaacttacacttagt |
45368699 |
T |
|
| Q |
201 |
tttcacttatttggggaaggcgtatgatagagtacctagagagatttt |
248 |
Q |
| |
|
||||| | |||| | ||||||||||||||||||||||||||||||||| |
|
|
| T |
45368698 |
tttcattgattttgagaaggcgtatgatagagtacctagagagatttt |
45368651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 4 - 251
Target Start/End: Complemental strand, 452885 - 452638
Alignment:
| Q |
4 |
aattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataacttat |
103 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| | |||||||| || || ||||||||||||| |||||| |||| |||||| || |
|
|
| T |
452885 |
aattataggggaattaagctaatgagtcataccatgaagttacgagaaagggtgatcgaaagaagactaagaaaggagactcgagttacggataaccaat |
452786 |
T |
|
| Q |
104 |
ttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagtttt |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||| || ||||||||||||||||| |||||||| |
|
|
| T |
452785 |
ttggttttatgcctgggaggtcgactatggaagcaatctacttacttcgacgcgtgatggagcgatatcggacggataaaaaagacttgcacttagtttt |
452686 |
T |
|
| Q |
204 |
cacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
251 |
Q |
| |
|
|| | |||||| |||||||| ||||||||||| |||||||||||||| |
|
|
| T |
452685 |
cattgatttggaaaaggcgtacgatagagtaccgagagagattttgtg |
452638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 2 - 251
Target Start/End: Complemental strand, 24584880 - 24584628
Alignment:
| Q |
2 |
cgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaatt---gagcgaagactaagaaaatagactcatgttaaagataa |
98 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || | |||||||||||| |||||| |||| |||||| |
|
|
| T |
24584880 |
cgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtgattattgaacaaagactaagaaaggagactcgagttatagataa |
24584781 |
T |
|
| Q |
99 |
cttatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaatta |
198 |
Q |
| |
|
|| ||||||||||||| |||||||||||| |||||||| || |||||||||||||||||||| |||||||||||| || |||||||||||||| || || |
|
|
| T |
24584780 |
ctgatttggttttatgtctgggaggtcgagtatggaagcgatctacttacttcgacgcgtgatggagcgatatcggacggataaaaaagacttacaccta |
24584681 |
T |
|
| Q |
199 |
gttttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
251 |
Q |
| |
|
|||||| | |||||| |||||||||||||||||| | |||||||||||||| |
|
|
| T |
24584680 |
attttcattgatttggagaaggcgtatgatagagtttccagagagattttgtg |
24584628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 8179803 - 8180046
Alignment:
| Q |
1 |
gcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataact |
100 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || || ||||||||||||| |||||| |||| |||||| |
|
|
| T |
8179803 |
gcgaattataggggaattaagctaataagtcataccatgaagttatgggaaagggtgatcgaaagaagactaagaaaggagactcgagttacggataacc |
8179902 |
T |
|
| Q |
101 |
tatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||| | |||||||||| ||||||||| |||||||||||| || ||||||||||||||||| || || |
|
|
| T |
8179903 |
aatttggttttatgcctgggaggtcgactatgaaagcaatctacttactttgacgcgtgatggagcgatatcggacggataaaaaagacttgcacttggt |
8180002 |
T |
|
| Q |
201 |
tttcacttatttggggaaggcgtatgatagagtacctagagaga |
244 |
Q |
| |
|
||||| | |||||| ||| |||||||||||||||| ||||||| |
|
|
| T |
8180003 |
tttcattgatttggaaaagacgtatgatagagtaccgagagaga |
8180046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 152
Target Start/End: Original strand, 13148336 - 13148482
Alignment:
| Q |
5 |
attataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataacttatt |
104 |
Q |
| |
|
|||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||| |||||||||||||| |||||| |||| |||||| ||| |
|
|
| T |
13148336 |
attataggggaattaaactaatgagtcttaccatgaagttatgggaaagggtgattgaatgaagactaagaaaagagactcgagttatcgataaccaatt |
13148435 |
T |
|
| Q |
105 |
tggttttatgcctgggaggtcgactatggaagtgaactacttacttcg |
152 |
Q |
| |
|
|| |||||||||| || ||| |||||||||| || |||||||||||| |
|
|
| T |
13148436 |
tgattttatgcctagg-tgtcaactatggaagcgatctacttacttcg |
13148482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 37281116 - 37281316
Alignment:
| Q |
1 |
gcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataact |
100 |
Q |
| |
|
|||||||||||| ||||||| ||||||| |||||||||||||||||| ||| || ||||| ||||||||||| ||| | ||| | |||| |||||| |
|
|
| T |
37281116 |
gcgaattataggagaattaaactaatgaatcataccatgaagttatgataaaaagtgattgaacgaagactaagtaaacaaacttaagttactgataacc |
37281215 |
T |
|
| Q |
101 |
tatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagt |
200 |
Q |
| |
|
|||||||||||| |||| || ||||||||| ||||||| |||||||||| |||| |||| | |||||| || | |||||||||| ||||||||||| |
|
|
| T |
37281216 |
aatttggttttatacctgagaagtcgactatagaagtgatctacttactttgacgtgtgatgaagcgatgtcatgcgaataaaaaagatttgcaattagt |
37281315 |
T |
|
| Q |
201 |
t |
201 |
Q |
| |
|
| |
|
|
| T |
37281316 |
t |
37281316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 2609703 - 2609788
Alignment:
| Q |
166 |
cgatatcgaacagataaaaaagacttgcaattagttttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
251 |
Q |
| |
|
|||||||| || ||||||||||||||||| |||||||||| | |||||| ||||||||||||||||| | |||||||||||||| |
|
|
| T |
2609703 |
cgatatcggacggataaaaaagacttgcacttagttttcattgatttggaaaaggcgtatgatagagtgctgagagagattttgtg |
2609788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 14769487 - 14769560
Alignment:
| Q |
178 |
gataaaaaagacttgcaattagttttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
251 |
Q |
| |
|
||||||||||||||||| || ||||||| | |||||| |||| ||||||||| |||| |||||||||||||||| |
|
|
| T |
14769487 |
gataaaaaagacttgcacttggttttcattgatttggagaagacgtatgataaagtagctagagagattttgtg |
14769560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 173
Target Start/End: Original strand, 33251337 - 33251497
Alignment:
| Q |
13 |
ggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataacttatttggtttta |
112 |
Q |
| |
|
|||||||| || ||||||||| |||||||| ||||| ||| ||| ||||| |||||||||| |||| || || |||| ||||| || |||||||| |
|
|
| T |
33251337 |
ggaattaaacttatgagtcatcccatgaagctatggaaaatggtgattgaacgaagactaaaaaaagtgattcgagttacttataaccaatctggtttta |
33251436 |
T |
|
| Q |
113 |
tgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcg |
173 |
Q |
| |
|
|||| | ||||| |||||||||| | ||| ||||||||||| |||| |||||||||||| |
|
|
| T |
33251437 |
tgcccgaaaggtcttctatggaagttatctaattacttcgacgtgtgatggagcgatatcg |
33251497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 252
Target Start/End: Original strand, 13148540 - 13148583
Alignment:
| Q |
209 |
atttggggaaggcgtatgatagagtacctagagagattttgtga |
252 |
Q |
| |
|
|||||||||||| || ||||||||| |||||||||||||||||| |
|
|
| T |
13148540 |
atttggggaaggtgtgtgatagagtgcctagagagattttgtga |
13148583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 150; Significance: 3e-79; HSPs: 12)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 32629622 - 32629868
Alignment:
| Q |
1 |
gcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataact |
100 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||| |||||| |
|
|
| T |
32629622 |
gcgaattacaggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgaacgaagactaagaaaagagactcacgttacggataacc |
32629721 |
T |
|
| Q |
101 |
tatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagt |
200 |
Q |
| |
|
|||||| ||||||||||| |||||||||||||||| || | ||||||||||||||| |||| ||||||| || |||||||||||||| || ||||| |
|
|
| T |
32629722 |
aatttggctttatgcctggaaggtcgactatggaagcgatc----tacttcgacgcgtgatggagagatatcggacggataaaaaagacttacacttagt |
32629817 |
T |
|
| Q |
201 |
tttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
251 |
Q |
| |
|
||||| | |||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
32629818 |
tttcattgatttggagaaggcgtatgatagagtacctagagagattttgtg |
32629868 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 6 - 251
Target Start/End: Complemental strand, 39907646 - 39907401
Alignment:
| Q |
6 |
ttataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataacttattt |
105 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||| |||| | |||| |||||| |||| |
|
|
| T |
39907646 |
ttattggggaattaagctaatgagtcataccatgaagttatgggaaagggtgatcgaaagaagactaagaaaggagacccgagttacggataaccaattt |
39907547 |
T |
|
| Q |
106 |
ggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagttttca |
205 |
Q |
| |
|
|||||||||||||||||||||||| |||||| | |||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
39907546 |
ggttttatgcctgggaggtcgactgtggaagcaatctacttacttcgacgcgtgatggagcgatatcggacagataaaaaagacttgcacttagttttca |
39907447 |
T |
|
| Q |
206 |
cttatttggggaaggcgtatgatagagtacctagagagattttgtg |
251 |
Q |
| |
|
| |||||| |||||||||||||||||||| |||||||||||||| |
|
|
| T |
39907446 |
ttgatttggaaaaggcgtatgatagagtaccgagagagattttgtg |
39907401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 3 - 247
Target Start/End: Original strand, 36651006 - 36651250
Alignment:
| Q |
3 |
gaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataactta |
102 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||| |||| |||||| | |
|
|
| T |
36651006 |
gaattataggagaattaagctaatgagtcataccatgaagttatgggaaagggtgattgaaagaagactaagaaaggagactcgagttacggataaccaa |
36651105 |
T |
|
| Q |
103 |
tttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagttt |
202 |
Q |
| |
|
|||||||||||| |||||||||||| |||||||| | |||||||||||||||||||| |||||||||||| || ||||||||||||||||| ||||||| |
|
|
| T |
36651106 |
tttggttttatgtctgggaggtcgattatggaagcaatctacttacttcgacgcgtgatggagcgatatcggacggataaaaaagacttgcacttagttt |
36651205 |
T |
|
| Q |
203 |
tcacttatttggggaaggcgtatgatagagtacctagagagattt |
247 |
Q |
| |
|
||| | |||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
36651206 |
tcattgatttggaaaaggcgtatgatagagtaccgagagagattt |
36651250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 33351078 - 33350828
Alignment:
| Q |
1 |
gcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataact |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || | ||||||||||||| |||||| |||| |||||| |
|
|
| T |
33351078 |
gcgaattataggggaattaagctaatgagtcataccatgaagttgtgggaaagggtgatcaaaagaagactaagaaaggagactctagttacggataacc |
33350979 |
T |
|
| Q |
101 |
tatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagt |
200 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| | ||||||||||| |||||||| |||||||||||| || ||||||||||||||||| ||||| |
|
|
| T |
33350978 |
aatttggttttatgcttgggaggtcgactatggaagcaatctacttacttcaacgcgtgatggagcgatatcggacggataaaaaagacttgcacttagt |
33350879 |
T |
|
| Q |
201 |
tttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
251 |
Q |
| |
|
|||| | |||||| |||| ||||||||||||||| |||||||||||||| |
|
|
| T |
33350878 |
tttctttgatttggaaaaggggtatgatagagtaccgagagagattttgtg |
33350828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 4 - 251
Target Start/End: Original strand, 38896630 - 38896877
Alignment:
| Q |
4 |
aattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataacttat |
103 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||| || || ||||||||||||| |||||| |||| |||||| || |
|
|
| T |
38896630 |
aattataggggaattaagctaatgagtcataccatgaagttatggaaaagggtgatcgaaagaagactaagaaaggagactcgagttacggataaccaat |
38896729 |
T |
|
| Q |
104 |
ttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagtttt |
203 |
Q |
| |
|
| |||||||||||||||||||| |||||||||| | |||||||||||||||| | |||||||||||| || ||||||||||||||||| |||||||| |
|
|
| T |
38896730 |
tcggttttatgcctgggaggtcaactatggaagcaatctacttacttcgacgcacaatggagcgatatcggacggataaaaaagacttgcacttagtttt |
38896829 |
T |
|
| Q |
204 |
cacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
251 |
Q |
| |
|
|| | |||||| |||| ||||||||||||||| |||||||||||||| |
|
|
| T |
38896830 |
cattaatttggaaaaggtgtatgatagagtaccgagagagattttgtg |
38896877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 3 - 251
Target Start/End: Complemental strand, 24178465 - 24178217
Alignment:
| Q |
3 |
gaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataactta |
102 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||| ||||||| |||| |||||| | |
|
|
| T |
24178465 |
gaattataggggaatttagctaatgagtcataccatgaagttatgggaaagggtgattcaacgaagactaagaaaagagactcaagttacggataacaaa |
24178366 |
T |
|
| Q |
103 |
tttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagttt |
202 |
Q |
| |
|
|||||||||| ||| |||||||||||||||||| || |||||| || ||| |||||| ||||||||| || || |||| ||||| || |||||||||| |
|
|
| T |
24178365 |
tttggttttacgccctggaggtcgactatggaagcgatctacttgctgcgatgcgtgatggagcgataccggacggatacaaaagggttacaattagttt |
24178266 |
T |
|
| Q |
203 |
tcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
251 |
Q |
| |
|
||| | |||||| || || |||||| ||||||||||||||||||||||| |
|
|
| T |
24178265 |
tcattgatttggagacggtgtatgacagagtacctagagagattttgtg |
24178217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 11592699 - 11592890
Alignment:
| Q |
1 |
gcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataact |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||| |||||| |||| |||||| |
|
|
| T |
11592699 |
gcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtgatcgaaagaagactaagaaaggagactcgagttacggataacc |
11592798 |
T |
|
| Q |
101 |
tatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttg |
192 |
Q |
| |
|
||||||||||||| || |||||||||||||||||| | || ||||||||||||||||| |||||||||||| || |||||||||||||| |
|
|
| T |
11592799 |
aatttggttttatggcttggaggtcgactatggaagcaatctgcttacttcgacgcgtgatggagcgatatcggacgaataaaaaagacttg |
11592890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 65 - 251
Target Start/End: Original strand, 22346586 - 22346772
Alignment:
| Q |
65 |
gaagactaagaaaatagactcatgttaaagataacttatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgaggga |
164 |
Q |
| |
|
||||||||||||| |||||| ||| |||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||| ||| |
|
|
| T |
22346586 |
gaagactaagaaaggagactcgagtttcggataaccaatttggttttatgcctgggaggtcgactatggaagcaatctacttacttcgacacgtgatgga |
22346685 |
T |
|
| Q |
165 |
gcgatatcgaacagataaaaaagacttgcaattagttttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
251 |
Q |
| |
|
|||||||||||| ||||||||||||||||| |||||||||| | |||||| |||||||||||||||||||| |||||||||||||| |
|
|
| T |
22346686 |
gcgatatcgaacggataaaaaagacttgcacttagttttcattgatttggaaaaggcgtatgatagagtaccgagagagattttgtg |
22346772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 108 - 251
Target Start/End: Original strand, 38606156 - 38606298
Alignment:
| Q |
108 |
ttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagttttcact |
207 |
Q |
| |
|
||||||| ||||||||||||||||| ||| || |||||||||||||||||||| |||||||||||| || |||||||||||||| || |||||||||| | |
|
|
| T |
38606156 |
ttttatgtctgggaggtcgactatgaaagcgatctacttacttcgacgcgtgatggagcgatatcggacggataaaaaagacttacacttagttttcatt |
38606255 |
T |
|
| Q |
208 |
tatttggggaaggcgtatgatagagtacctagagagattttgtg |
251 |
Q |
| |
|
|||| | ||||||||||||| |||||||| ||||||||||||| |
|
|
| T |
38606256 |
gattttgagaaggcgtatgat-gagtacctggagagattttgtg |
38606298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 141 - 251
Target Start/End: Complemental strand, 46356983 - 46356873
Alignment:
| Q |
141 |
ctacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagttttcacttatttggggaaggcgtatgatagagtacctaga |
240 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| || |||||||||||||||| |||||||||| | |||||| |||||||||||||||||||| ||| |
|
|
| T |
46356983 |
ctacttacttcgacgcgtgatggagcgatatcggacgaataaaaaagacttgcacttagttttcattgatttggaaaaggcgtatgatagagtaccgaga |
46356884 |
T |
|
| Q |
241 |
gagattttgtg |
251 |
Q |
| |
|
||||||||||| |
|
|
| T |
46356883 |
gagattttgtg |
46356873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 36870419 - 36870346
Alignment:
| Q |
178 |
gataaaaaagacttgcaattagttttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
251 |
Q |
| |
|
||||||||| ||||||| ||| |||||| | |||||| |||||||||||||||||| ||||||||||||||||| |
|
|
| T |
36870419 |
gataaaaaatacttgcacttaattttcattgatttggagaaggcgtatgatagagtgcctagagagattttgtg |
36870346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 255
Target Start/End: Original strand, 11593158 - 11593217
Alignment:
| Q |
196 |
ttagttttcacttatttggggaaggcgtatgatagagtacctagagagattttgtgacaa |
255 |
Q |
| |
|
|||||||||| | |||||| |||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
11593158 |
ttagttttcattgatttggaaaaggcgtatgatagagtaccgagagagattttgtgacaa |
11593217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 149; Significance: 1e-78; HSPs: 10)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 3 - 251
Target Start/End: Complemental strand, 43241651 - 43241403
Alignment:
| Q |
3 |
gaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataactta |
102 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||| ||||||| |||| |||||| | |
|
|
| T |
43241651 |
gaattataagggaattaagctaatgagtcataccatgaagttatgggaaagggtgatcgaaagaagactaagaaaggagactcaagttacggataaccaa |
43241552 |
T |
|
| Q |
103 |
tttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagttt |
202 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||| || ||||||||||||||||| ||||||| |
|
|
| T |
43241551 |
tttggttttatgcctgggaggtcgactatggaagcaatctacttacttcgacgcgtgatggagcgatatcggacggataaaaaagacttgcacttagttt |
43241452 |
T |
|
| Q |
203 |
tcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
251 |
Q |
| |
|
||| | |||||| ||| |||||||||||||||| |||||||||||||| |
|
|
| T |
43241451 |
tcattgatttggaaaagacgtatgatagagtaccgagagagattttgtg |
43241403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 8670928 - 8671178
Alignment:
| Q |
1 |
gcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataact |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||| ||||||||| || ||| |||| ||||| |
|
|
| T |
8670928 |
gcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtgatggaaagaaaactaagaaaggagcctcgagttacggataaaa |
8671027 |
T |
|
| Q |
101 |
tatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||| || ||||||||||||||||| ||||| |
|
|
| T |
8671028 |
aatttggttttatgcctgggaggtcgactatggaagcaatctacttacttcgacgcgtgatggagcgatatcggacggataaaaaagacttgcacttagt |
8671127 |
T |
|
| Q |
201 |
tttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
251 |
Q |
| |
|
||||| | |||||| |||||||||||||||||||| |||||||||||||| |
|
|
| T |
8671128 |
tttcattgatttggaaaaggcgtatgatagagtaccgagagagattttgtg |
8671178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 51442036 - 51441786
Alignment:
| Q |
1 |
gcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataact |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||| |||||| |||| |||||| |
|
|
| T |
51442036 |
gcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtgatcgaaagaagactaagaaaggagactcgagttacggataacc |
51441937 |
T |
|
| Q |
101 |
tatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||| |||| |||||| || ||||||||||||||||| ||||| |
|
|
| T |
51441936 |
aatttggttttatgcctgggaggtcgactatggaagcaatctacttacatcgacgcgtgatggagtgatatcagacggataaaaaagacttgcacttagt |
51441837 |
T |
|
| Q |
201 |
tttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
251 |
Q |
| |
|
||||| | |||||| || ||||||||||||||| | ||||||||||||| |
|
|
| T |
51441836 |
tttcattgatttggaaaaagcgtatgatagagtatcgtgagagattttgtg |
51441786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 49348674 - 49348445
Alignment:
| Q |
1 |
gcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataact |
100 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||| |||||||||||| || || ||||||||||||| |||||| |||| |||||| |
|
|
| T |
49348674 |
gcgaattataggagaattaagctaatgagtcataccatgaagtcatgggaaagggtgatcgaaagaagactaagaaagaagactcgagttatggataacc |
49348575 |
T |
|
| Q |
101 |
tatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||| || ||||||||||||||||| ||||| |
|
|
| T |
49348574 |
aatttggttttatgcctgggaggtcgactatggaagcaatctacttacttcgacgcgtgatggagcgatatcggacggataaaaaagacttgcacttagt |
49348475 |
T |
|
| Q |
201 |
tttcacttatttggggaaggcgtatgatag |
230 |
Q |
| |
|
||||| | |||||| ||||||| |||||| |
|
|
| T |
49348474 |
tttcattgatttggaaaaggcgtgtgatag |
49348445 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 7 - 251
Target Start/End: Complemental strand, 29173795 - 29173551
Alignment:
| Q |
7 |
tataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataacttatttg |
106 |
Q |
| |
|
|||||||||||||| |||||||||| ||| || |||||||| |||||| | ||||| |||| |||||||||| |||||| |||| ||||||| ||||| |
|
|
| T |
29173795 |
tataggggaattaaactaatgagtcgtacaatcaagttatgcgaaaggatgattgaacgaaaactaagaaaagagactcgagttacggataactaatttg |
29173696 |
T |
|
| Q |
107 |
gttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagttttcac |
206 |
Q |
| |
|
||||||||||| |||||||||||||||||| | |||||||||||||| |||| ||||||||||| || ||||||||||||||||| |||||||| | |
|
|
| T |
29173695 |
gttttatgcctaggaggtcgactatggaagcaatttacttacttcgacgtgtgatggagcgatatcagacggataaaaaagacttgcacttagtttttat |
29173596 |
T |
|
| Q |
207 |
ttatttggggaaggcgtatgatagagtacctagagagattttgtg |
251 |
Q |
| |
|
| |||||| |||||||||||||||||| || |||||| ||||||| |
|
|
| T |
29173595 |
tgatttggagaaggcgtatgatagagtgccgagagaggttttgtg |
29173551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 4 - 251
Target Start/End: Complemental strand, 32405729 - 32405486
Alignment:
| Q |
4 |
aattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataacttat |
103 |
Q |
| |
|
|||||||||| |||||| || |||||||||||||||||||||||||||| ||| |||||||| |||||||||||| ||| || |||| |||| || |
|
|
| T |
32405729 |
aattatagggaaattaaccttatgagtcataccatgaagttatgggaaaaggtgattgagcggagactaagaaaa-agattcgagttaccaataatcaat |
32405631 |
T |
|
| Q |
104 |
ttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagtttt |
203 |
Q |
| |
|
|||| ||||||||| | |||||||||||||||| | |||||||||||||| |||| ||| |||||| || ||||||||||| |||| |||||||| |
|
|
| T |
32405630 |
ttggatttatgccttgaaggtcgactatggaagcaatctacttacttcgacatgtgatgga--gatatcagactgataaaaaagatgtgcacttagtttt |
32405533 |
T |
|
| Q |
204 |
cacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
251 |
Q |
| |
|
|| | |||| || || |||||||||||||| |||||||||||||||| |
|
|
| T |
32405532 |
cattgattt-ggaaaagcgtatgatagagtgtctagagagattttgtg |
32405486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 251
Target Start/End: Original strand, 45833593 - 45833820
Alignment:
| Q |
22 |
ctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataacttatttggttttatgcctggga |
121 |
Q |
| |
|
|||| ||||||| ||||||||||||| |||| | | |||||||||||||||| ||||||||||| ||| ||||||| ||||||||||||| || || |
|
|
| T |
45833593 |
ctaacgagtcatgccatgaagttatgagaaatgatgattgagcgaagactaaagaaatagactcaagttt--gataactaatttggttttatgtatgaga |
45833690 |
T |
|
| Q |
122 |
ggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagttttcacttatttggggaaggc |
221 |
Q |
| |
|
|| |||||| ||| | ||||||||||||||| |||| |||| ||||| | ||| |||||||||| ||| | ||||||||| | ||||| |||||| |
|
|
| T |
45833691 |
tatcaactatgaaagcaacctacttacttcgacgtgtgatggagtgatattggacaaataaaaaagatttgtatatagttttcattgatttgaagaaggc |
45833790 |
T |
|
| Q |
222 |
gtatgatagagtacctagagagattttgtg |
251 |
Q |
| |
|
||| |||||||| ||||||| |||||||| |
|
|
| T |
45833791 |
gtacgatagagtgtctagagatattttgtg |
45833820 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 11681833 - 11681914
Alignment:
| Q |
3 |
gaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagact |
84 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||| || |||||||||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
11681833 |
gaattataggggaattaagctaaagagtcataccatcaaattatgggaaagggtgattgagcgaagactaagaaaagagact |
11681914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 26 - 230
Target Start/End: Complemental strand, 35829638 - 35829434
Alignment:
| Q |
26 |
tgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataacttatttggttttatgcctgggaggtc |
125 |
Q |
| |
|
|||||||||||| ||||||||||||||| || ||||| || ||| |||||||| | |||| |||| ||||| |||| | ||||||||||||||||| |
|
|
| T |
35829638 |
tgagtcataccaagaagttatgggaaagagtgattgaacggagagtaagaaaaaatactcgagttacttataaccaatttagatttatgcctgggaggtc |
35829539 |
T |
|
| Q |
126 |
gactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagttttcacttatttggggaaggcgtat |
225 |
Q |
| |
|
|||||||||||||| |||||||||| |||| ||| ||| | |||| | ||| |||||||||| | || |||||||||| | |||||| |||||| ||| |
|
|
| T |
35829538 |
gactatggaagtgatctacttacttagacgtatgatggaacaatattggacaaataaaaaagatatacacttagttttcattgatttggagaaggcttat |
35829439 |
T |
|
| Q |
226 |
gatag |
230 |
Q |
| |
|
|||| |
|
|
| T |
35829438 |
aatag |
35829434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 251
Target Start/End: Complemental strand, 34828321 - 34828107
Alignment:
| Q |
37 |
atgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataacttatttggttttatgcctgggaggtcgactatggaag |
136 |
Q |
| |
|
|||||||||||||||||| | |||||| |||||| ||| ||| ||||| |||| ||| ||||| ||||||| |||||||||| ||| |||| |
|
|
| T |
34828321 |
atgaagttatgggaaaggatgattgagagaagaccaaggaaagagacttgagttatcaatattcaatttgattttatgttagggaggtcgattatagaag |
34828222 |
T |
|
| Q |
137 |
tgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagttttcacttatttggggaaggcgtatgatagagtacc |
236 |
Q |
| |
|
|| |||| |||||||||| || |||| ||||||| ||| ||||||| |||| ||| |||||||||| | ||||| ||| | |||||||| ||| | |
|
|
| T |
34828221 |
cgatctacctacttcgacgtacgatggagagatatcggacatataaaaatgactcgcacttagttttcattgatttgaagaatgtgtatgatatagtgtc |
34828122 |
T |
|
| Q |
237 |
tagagagattttgtg |
251 |
Q |
| |
|
|| |||||||||||| |
|
|
| T |
34828121 |
taaagagattttgtg |
34828107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 147; Significance: 2e-77; HSPs: 7)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 2 - 251
Target Start/End: Complemental strand, 15216540 - 15216293
Alignment:
| Q |
2 |
cgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataactt |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||| ||||| |
|
|
| T |
15216540 |
cgaattataggggaattaagctaatgagtcataccatgaagttatgcgaaagggtaattgagcgaagactaagaaaagagactcaagttatggataatca |
15216441 |
T |
|
| Q |
102 |
atttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagtt |
201 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||| || |||||||||||||||| ||| | ||||||||||| |||||||||||||| || |||||| |
|
|
| T |
15216440 |
atttggttttatgcctgggaggtcgactatgaaagcgatctacttacttcgacgcttgatg--gcgatatcgaatggataaaaaagacttacatttagtt |
15216343 |
T |
|
| Q |
202 |
ttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
251 |
Q |
| |
|
|||| | ||||| |||||||||||||||||||||||| |||||||||| |
|
|
| T |
15216342 |
ttcattgatttgaataaggcgtatgatagagtacctagatagattttgtg |
15216293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 36544162 - 36544411
Alignment:
| Q |
1 |
gcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataact |
100 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||| ||||||| |||| |||||| |
|
|
| T |
36544162 |
gcgaatcataggggaattaagctaatgagtcataccatgaagttatgggaaagggtgatcgaaagaagactaagaaaggagactcaagttacggataacc |
36544261 |
T |
|
| Q |
101 |
tatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||| || ||||||||||| ||||| ||||| |
|
|
| T |
36544262 |
aatttggttttatgcctgggaggtcgactatggaagcaatctacttacttcgacgcgtgattgagcgatatctgacggataaaaaagatttgcacttagt |
36544361 |
T |
|
| Q |
201 |
tttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
251 |
Q |
| |
|
||||| | |||| || |||||||||||||||||||| ||| |||||||||| |
|
|
| T |
36544362 |
tttcattgattt-ggaaaggcgtatgatagagtaccgagatagattttgtg |
36544411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 42855271 - 42855035
Alignment:
| Q |
17 |
ttaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataacttatttggttttatgcc |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||| |||||| ||||||||||||||| |
|
|
| T |
42855271 |
ttaagctaatgagtcataccatgaagttatgggaaaggaaaattgagcgaagactaagaaaagagactcgcgttacggataaccaatttggttttatgcc |
42855172 |
T |
|
| Q |
117 |
tgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagat--aaaaaagacttgcaattagttttcacttatttgg |
214 |
Q |
| |
|
||||||||||||||| |||| || |||||||||||||||||||| |||||||||| | || ||| ||||||||||| || |||||||||| | |||||| |
|
|
| T |
42855171 |
tgggaggtcgactattgaagcgatctacttacttcgacgcgtgatggagcgatattggacggataaaaaaaagacttacacttagttttcattgatttgg |
42855072 |
T |
|
| Q |
215 |
ggaaggcgtatgatagagtacctagagagattttgtg |
251 |
Q |
| |
|
|||||| ||||||||||| |||||||| |||||||| |
|
|
| T |
42855071 |
agaaggcatatgatagagtgcctagagatattttgtg |
42855035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 150 - 251
Target Start/End: Complemental strand, 36566364 - 36566263
Alignment:
| Q |
150 |
tcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagttttcacttatttggggaaggcgtatgatagagtacctagagagattttg |
249 |
Q |
| |
|
||||||||||| |||||||||||| || ||||||||||||||||| |||||||||| | |||||| |||||||||||||||||| | |||||||||||| |
|
|
| T |
36566364 |
tcgacgcgtgatggagcgatatcggacggataaaaaagacttgcacttagttttcattgatttggaaaaggcgtatgatagagtatcgagagagattttg |
36566265 |
T |
|
| Q |
250 |
tg |
251 |
Q |
| |
|
|| |
|
|
| T |
36566264 |
tg |
36566263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 145 - 214
Target Start/End: Original strand, 6184814 - 6184883
Alignment:
| Q |
145 |
ttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagttttcacttatttgg |
214 |
Q |
| |
|
||||||||||| |||| |||||||||||| ||||||||||||||||| || |||||||||| | |||||| |
|
|
| T |
6184814 |
ttacttcgacgtgtgatggagcgatatcggacagataaaaaagacttacacttagttttcattgatttgg |
6184883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 13588720 - 13588800
Alignment:
| Q |
4 |
aattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagact |
84 |
Q |
| |
|
||||||| | ||||||| ||||||||||||||||| |||||| |||||| | | |||||||||| |||||||||| ||||| |
|
|
| T |
13588720 |
aattataagtgaattaaactaatgagtcataccataaagttaagggaaatgatgattgagcgaaaactaagaaaagagact |
13588800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 250
Target Start/End: Complemental strand, 30579305 - 30579245
Alignment:
| Q |
190 |
ttgcaattagttttcacttatttggggaaggcgtatgatagagtacctagagagattttgt |
250 |
Q |
| |
|
||||| |||||||| | | |||||| ||||||| || ||||||| |||||||||||||||| |
|
|
| T |
30579305 |
ttgcacttagttttaattcatttggagaaggcgaatcatagagtgcctagagagattttgt |
30579245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 147; Significance: 2e-77; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 5260520 - 5260274
Alignment:
| Q |
1 |
gcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataact |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||| |||||| |
|
|
| T |
5260520 |
gcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagacttagaaaagagactcacgttacggataacc |
5260421 |
T |
|
| Q |
101 |
tatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagt |
200 |
Q |
| |
|
||||||||||||| ||||||||||| |||||||| || || ||| |||||||| ||| |||||||||||| || |||||||||||||| || ||||| |
|
|
| T |
5260420 |
aatttggttttatgtatgggaggtcgattatggaagcgatctctttatttcgacgcctgatggagcgatatcggacggataaaaaagacttacacttagt |
5260321 |
T |
|
| Q |
201 |
tttcacttatttggggaaggcgtatgatagagtacctagagagattt |
247 |
Q |
| |
|
||||| |||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
5260320 |
tttcatcgatttggagaaggcgtatgatagagtacctagagagattt |
5260274 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 20428909 - 20428659
Alignment:
| Q |
1 |
gcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataact |
100 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||| |||| | ||||| |
|
|
| T |
20428909 |
gcgaattataagggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgaacgaagactaagaacagagactcacgttacaaataacc |
20428810 |
T |
|
| Q |
101 |
tatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagt |
200 |
Q |
| |
|
|| ||||||||||| |||||||| ||||||||||| || |||||||||| |||| |||| |||||||||||| || |||||||||||||| || |||| |
|
|
| T |
20428809 |
aatatggttttatgcttgggaggttgactatggaagcgatctacttactttgacgtgtgatggagcgatatcggacggataaaaaagacttacacctagt |
20428710 |
T |
|
| Q |
201 |
tttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
251 |
Q |
| |
|
||||| | ||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
20428709 |
tttcattgatttgtagaaggcgtatgatagagtacctagagagattttgtg |
20428659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 30669908 - 30670132
Alignment:
| Q |
4 |
aattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataacttat |
103 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||| |||||||||||||| ||||||| |||| |||||| || |
|
|
| T |
30669908 |
aattataggggaattaagctaatgagtcataccatgaagttatggcaaaggatgattgaacgaagactaagaaatgagactcaagttacggataaccaat |
30670007 |
T |
|
| Q |
104 |
ttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagtttt |
203 |
Q |
| |
|
||||||||||||| |||||||||||||||||| | ||||||||||||||| |||| |||||||||||| ||||| ||||||||||| || |||||||| |
|
|
| T |
30670008 |
ttggttttatgcc-aggaggtcgactatggaagcaatctacttacttcgacgtgtgatggagcgatatcggacagagaaaaaagacttacacttagtttt |
30670106 |
T |
|
| Q |
204 |
cacttatttggggaaggcgtatgata |
229 |
Q |
| |
|
|| | |||||| |||||||| ||||| |
|
|
| T |
30670107 |
cattgatttggagaaggcgtttgata |
30670132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 6082399 - 6082660
Alignment:
| Q |
1 |
gcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataac- |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||| |||||| |||| |||||| |
|
|
| T |
6082399 |
gcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtgatcgaaagaagactaagaaaggagactcgagttacggataacc |
6082498 |
T |
|
| Q |
100 |
----------ttatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagac |
189 |
Q |
| |
|
|| ||| ||||||||||||||||||||||||||||| | |||||||||||||| |||| | |||||||||| || |||||||| ||| |
|
|
| T |
6082499 |
aattttttttttttttttttttatgcctgggaggtcgactatggaagcaatctacttacttcgacatgtgatgcagcgatatcggacggataaaaaggac |
6082598 |
T |
|
| Q |
190 |
ttgcaattagttttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
251 |
Q |
| |
|
||||| |||||||||| | |||||| |||| ||||||||||||||| |||||||||||||| |
|
|
| T |
6082599 |
ttgcacttagttttcattgatttggaaaaggtgtatgatagagtaccgagagagattttgtg |
6082660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 66 - 251
Target Start/End: Original strand, 9705850 - 9706035
Alignment:
| Q |
66 |
aagactaagaaaatagactcatgttaaagataacttatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggag |
165 |
Q |
| |
|
||||||||||||| ||||||| |||| |||||| | ||| ||||||||||||| ||||||||||||| || ||||||||||||||||| || |||| |
|
|
| T |
9705850 |
aagactaagaaaagagactcacgttacggataaccaacttgactttatgcctgggaagtcgactatggaaacgatctacttacttcgacgcgcgatggag |
9705949 |
T |
|
| Q |
166 |
cgatatcgaacagataaaaaagacttgcaattagttttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
251 |
Q |
| |
|
|||||||| || |||||||||||||| || |||||||||| | |||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
9705950 |
cgatatcggacggataaaaaagacttacacttagttttcattgatttggagaaggcgtatgatagagtacctagagagattttgtg |
9706035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 102 - 251
Target Start/End: Original strand, 3629377 - 3629526
Alignment:
| Q |
102 |
atttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagtt |
201 |
Q |
| |
|
||||| |||||||| | |||||||||| |||||| ||| |||||||||||| || ||| |||||||||||| ||| | ||||||||||| || |||||| |
|
|
| T |
3629377 |
atttgattttatgctttggaggtcgacaatggaaatgatctacttacttcggcgtatgatggagcgatatcggacaaacaaaaaagacttacacttagtt |
3629476 |
T |
|
| Q |
202 |
ttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
251 |
Q |
| |
|
|||| | ||||| |||||||||||||| |||||||| ||||||||||| |
|
|
| T |
3629477 |
ttcattgatttgaagaaggcgtatgataaagtacctatggagattttgtg |
3629526 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 26290794 - 26290995
Alignment:
| Q |
1 |
gcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataact |
100 |
Q |
| |
|
|||||| ||||||||||||| || |||||||||||||| |||||| |||| || ||||| |||||||||| |||| || |||| |||| || || |
|
|
| T |
26290794 |
gcgaatgataggggaattaaccttatgagtcataccataaagttaataaaaagagtgattgaacgaagactaaaaaaagagtctcaagttattgacaatc |
26290893 |
T |
|
| Q |
101 |
tatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagt |
200 |
Q |
| |
|
|||| |||||||| ||| ||||||| |||||||| || |||||| |||||| | |||| ||||||||||| ||| | ||||| |||||||| ||||| |
|
|
| T |
26290894 |
aatttagttttatgtttggaaggtcga-tatggaagcgatctacttgcttcgatgtgtgatggagcgatatcagacaaaaaaaaaggacttgcacttagt |
26290992 |
T |
|
| Q |
201 |
ttt |
203 |
Q |
| |
|
||| |
|
|
| T |
26290993 |
ttt |
26290995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 230
Target Start/End: Complemental strand, 2681669 - 2681479
Alignment:
| Q |
40 |
aagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataacttatttggttttatgcctgggaggtcgactatggaagtga |
139 |
Q |
| |
|
|||||| |||||||||| ||||| ||||| |||||||| |||||| | | |||||| ||||||||||||| ||| | || ||||||||||| || |
|
|
| T |
2681669 |
aagttacgggaaagggtgattgaaggaagattaagaaaagagactcgaggaatggataaccaatttggttttatgtctgtaaagttgactatggaagcga |
2681570 |
T |
|
| Q |
140 |
actacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagttttcacttatttggggaaggcgtatgatag |
230 |
Q |
| |
|
|||||| ||||||| || | ||||||| || | ||||||| ||||||| |||||||||| | |||||| ||||||||||||||| |
|
|
| T |
2681569 |
cttacttagttcgacgtatggtacaacgatatcagacgggtaaaaaatacttgcacttagttttcattgatttggagaaggcgtatgatag |
2681479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 143; Significance: 4e-75; HSPs: 9)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 2076746 - 2076496
Alignment:
| Q |
1 |
gcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataact |
100 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || || ||||||||||||| |||||| |||| |||||| |
|
|
| T |
2076746 |
gcgaattataggggaattaagctaacgagtcataccatgaagttatgggaaagggtgatcgaaagaagactaagaaaggagactcgagttacggataacc |
2076647 |
T |
|
| Q |
101 |
tatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| | ||||||||||||||||| || |||||||||||| || ||||||||||||||||| ||| | |
|
|
| T |
2076646 |
aatttggttttatgcctgggaggtcgactatggaagcaatctacttacttcgacgcgggatggagcgatatcggacggataaaaaagacttgcacttaat |
2076547 |
T |
|
| Q |
201 |
tttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
251 |
Q |
| |
|
||||| | |||||| |||||||||||||||||||| |||||||||||||| |
|
|
| T |
2076546 |
tttcattgatttggaaaaggcgtatgatagagtaccgagagagattttgtg |
2076496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 12 - 251
Target Start/End: Original strand, 20318012 - 20318251
Alignment:
| Q |
12 |
gggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataacttatttggtttt |
111 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||| |||||| |||| ||||||| |||||||||| |
|
|
| T |
20318012 |
gggaattaagctaatgagtcataccatgaagttatgggaaagggtgatcgaaagaagactaagaaaggagactcgagttacagataaccaatttggtttt |
20318111 |
T |
|
| Q |
112 |
atgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagttttcacttatt |
211 |
Q |
| |
|
||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||| || |||||| |||||||||| |||||||||| | ||| |
|
|
| T |
20318112 |
atgcctgggaggtcgactatggaagcaatctacttacttcgacgcgtgatggagcgatatcggacggataaataagacttgcacttagttttcattaatt |
20318211 |
T |
|
| Q |
212 |
tggggaaggcgtatgatagagtacctagagagattttgtg |
251 |
Q |
| |
|
||| |||||||||||||||||||| ||||||||||||| |
|
|
| T |
20318212 |
tggaaaaggcgtatgatagagtaccgggagagattttgtg |
20318251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 3 - 251
Target Start/End: Original strand, 24177536 - 24177784
Alignment:
| Q |
3 |
gaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataactta |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||| |||||| |||| |||||| | |
|
|
| T |
24177536 |
gaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtgatcgaaagaagactaagaaaggagactcgagttacggataaccaa |
24177635 |
T |
|
| Q |
103 |
tttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagttt |
202 |
Q |
| |
|
||||||||||||||||| |||||||||| ||||| | |||||||||||||||| ||| |||||||||||| || ||||||||||||||||| ||||||| |
|
|
| T |
24177636 |
tttggttttatgcctggaaggtcgactacggaagcaatctacttacttcgacgcatgatggagcgatatcggacggataaaaaagacttgcacttagttt |
24177735 |
T |
|
| Q |
203 |
tcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
251 |
Q |
| |
|
||| | ||||| ||||| |||||||||||||| |||||||||||||| |
|
|
| T |
24177736 |
tcattgatttgaaaaaggcatatgatagagtaccgagagagattttgtg |
24177784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 1288800 - 1288596
Alignment:
| Q |
1 |
gcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataact |
100 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| || || ||||||||||||| |||||| |||| |||||| |
|
|
| T |
1288800 |
gcgaattataggggaattaagttaatgagtcataccatgaagctatgggaaagggtgatcgaaagaagactaagaaaggagactcgagttacggataacc |
1288701 |
T |
|
| Q |
101 |
tatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagt |
200 |
Q |
| |
|
||||||||||||| |||||||||||| | |||||| | |||||||||||||||||||| ||||| |||||| || |||||||||||| |||| ||||| |
|
|
| T |
1288700 |
aatttggttttatggctgggaggtcgattgtggaagcaatctacttacttcgacgcgtgatggagcaatatcggacggataaaaaagacatgcacttagt |
1288601 |
T |
|
| Q |
201 |
tttca |
205 |
Q |
| |
|
||||| |
|
|
| T |
1288600 |
tttca |
1288596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 2 - 248
Target Start/End: Original strand, 26970 - 27215
Alignment:
| Q |
2 |
cgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataactt |
101 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||| |||| | |||| ||||| |||| | |||||||| ||||| |||| |||||| |
|
|
| T |
26970 |
cgaattataggggaattaaattaatgagtcataccatgaagtcatggaagcgggtgattgaacgaaaattaagaaaaaagacttgagttactgataacca |
27069 |
T |
|
| Q |
102 |
atttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagtt |
201 |
Q |
| |
|
||||||||||||| || || ||||||||||||| || ||||||||||| ||| |||| | ||||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
27070 |
ttttggttttatgcttga-agatcgactatggaagcgatctacttacttcaacgtgtgatgaagcgatatcgaacggataaaaaagacttgcacttagtt |
27168 |
T |
|
| Q |
202 |
ttcacttatttggggaaggcgtatgatagagtacctagagagatttt |
248 |
Q |
| |
|
|||| | |||||| ||||||| |||||||| | |||| ||||||||| |
|
|
| T |
27169 |
ttcattgatttggagaaggcgaatgatagatttcctaaagagatttt |
27215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 22832161 - 22832091
Alignment:
| Q |
6 |
ttataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaa |
76 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||| |
|
|
| T |
22832161 |
ttataggggaattaagctaatgagtcataccatgaagttatgggaaaaagtgattgaatgaagactaagaa |
22832091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 12 - 251
Target Start/End: Original strand, 37123591 - 37123831
Alignment:
| Q |
12 |
gggaattaagctaatgagtcataccatgaagttatgggaaagg--gtaattgagcgaagactaagaaaatagactcatgttaaagataacttatttggtt |
109 |
Q |
| |
|
|||| |||| || |||| ||||||||||||||||||| ||| || ||||| |||||||||||||| ||||||| |||| | ||| | |||||| |
|
|
| T |
37123591 |
gggagttaaacttatgattcataccatgaagttatggaaaaaaaagtgattgaatgaagactaagaaaagagactcaagttattgttaatcaaattggtt |
37123690 |
T |
|
| Q |
110 |
ttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagttttcactta |
209 |
Q |
| |
|
|||||| || || |||||| || ||||||| ||||||||| | ||| ||||| ||||||| |||| ||||||||||| |||| |||||||||| | | |
|
|
| T |
37123691 |
ttatgcttgagatgtcgaccatagaagtgatctacttactacaacgtatgagg-agcgataacgaatggataaaaaagatgtgcacttagttttcattga |
37123789 |
T |
|
| Q |
210 |
tttggggaaggcgtatgatagagtacctagagagattttgtg |
251 |
Q |
| |
|
||||| ||| |||||||||||| |||| |||||||||||| |
|
|
| T |
37123790 |
tttggagaaactgtatgatagagttcctaaagagattttgtg |
37123831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 25937109 - 25937183
Alignment:
| Q |
4 |
aattataggggaattaagctaatgagtcataccatgaagttatggg-aaagggtaattgagcgaagactaagaaa |
77 |
Q |
| |
|
||||||||| |||||| || |||| |||||||||||||||||||| ||||| ||||||||||||||||| |||| |
|
|
| T |
25937109 |
aattataggacaattaaacttatgattcataccatgaagttatgggaaaaggttaattgagcgaagactacgaaa |
25937183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 147
Target Start/End: Complemental strand, 756214 - 756080
Alignment:
| Q |
13 |
ggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataacttatttggtttta |
112 |
Q |
| |
|
|||||||| || | ||||| ||||| |||||||||||||| || |||||||| |||| ||||||| ||||||| | ||| ||||| |||| ||||| |
|
|
| T |
756214 |
ggaattaaacttaagagtcgtaccaacaagttatgggaaagagtgattgagcggagacaaagaaaagagactcaaggtaacgataatcaatttaatttta |
756115 |
T |
|
| Q |
113 |
tgcctgggaggtcgactatggaagtgaactactta |
147 |
Q |
| |
|
|||||| ||||| || ||||||| || ||||||| |
|
|
| T |
756114 |
tgcctgagaggttaacaatggaagcgatctactta |
756080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 143; Significance: 4e-75; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 51448981 - 51448731
Alignment:
| Q |
1 |
gcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataact |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||||||||||||| |||||| |||| |||||| |
|
|
| T |
51448981 |
gcgaattataggggaattaagctaatgagtcataccataaagttatgggaaagggtgatcgaaagaagactaagaaaggagactcgagttacggataacc |
51448882 |
T |
|
| Q |
101 |
tatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagt |
200 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||| | ||| |||||||||||||||| |||||||||||| || ||||||||||||||||| ||||| |
|
|
| T |
51448881 |
aatttggttttatacctgggaggtcgactatggaagcaatctatttacttcgacgcgtgatggagcgatatcggacggataaaaaagacttgcacttagt |
51448782 |
T |
|
| Q |
201 |
tttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
251 |
Q |
| |
|
||||| | |||||| |||||||||||||||||||| |||||||||||||| |
|
|
| T |
51448781 |
tttcattgatttggaaaaggcgtatgatagagtaccgagagagattttgtg |
51448731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 52137838 - 52138088
Alignment:
| Q |
1 |
gcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataact |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||| ||||| ||| || |||| |||||| |
|
|
| T |
52137838 |
gcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtgatcgaaagaagactcagaaaggagattcgagttacggataacc |
52137937 |
T |
|
| Q |
101 |
tatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagt |
200 |
Q |
| |
|
|||||||||||||||||||||||||| |||| ||| | |||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
52137938 |
aatttggttttatgcctgggaggtcgaatatgaaagcaatctacttacttcgacgcgtgatggagcgatatcggacagataaaaaagacttgcacttagt |
52138037 |
T |
|
| Q |
201 |
tttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
251 |
Q |
| |
|
||||| | |||||| |||||||||||||||||||| |||||||||||||| |
|
|
| T |
52138038 |
tttcattgatttggaaaaggcgtatgatagagtaccgagagagattttgtg |
52138088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 38849112 - 38849344
Alignment:
| Q |
1 |
gcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataact |
100 |
Q |
| |
|
|||||||||| ||||||||| |||||||||||||||||||||||||||||||| || ||||| ||||| ||||||||| |||||| |||| |||||||| |
|
|
| T |
38849112 |
gcgaattataagggaattaaactaatgagtcataccatgaagttatgggaaagagtgattgaacgaaggctaagaaaagagactcgggttacagataact |
38849211 |
T |
|
| Q |
101 |
tatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagt |
200 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| | |||||||||| ||||| ||| |||| ||| ||| || ||||||||| |||| || ||||| |
|
|
| T |
38849212 |
aattttcttttatgcctgggaggtcgactatggaagcggtctacttactttgacgcttgacggagtgatgtcggacggataaaaaacacttacacttagt |
38849311 |
T |
|
| Q |
201 |
tttcacttatttggggaaggcgtatgatagagt |
233 |
Q |
| |
|
||||| | |||||| ||||||||| |||||||| |
|
|
| T |
38849312 |
tttcattgatttggagaaggcgtaagatagagt |
38849344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 246
Target Start/End: Original strand, 3368775 - 3369016
Alignment:
| Q |
3 |
gaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataactta |
102 |
Q |
| |
|
||||||||| ||||||| || || | ||||||||||||||||||||||| || ||||| ||||||||||||||| |||||| |||| |||| | | |
|
|
| T |
3368775 |
gaattatagaagaattaaacttataattcataccatgaagttatgggaaaatgtgattgaacgaagactaagaaaagagactcgagttacttataattaa |
3368874 |
T |
|
| Q |
103 |
tttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagat-aaaaaagacttgcaattagtt |
201 |
Q |
| |
|
||| ||| | ||| || ||| ||||||||| |||| | |||| ||||||||||| ||| ||||| ||||| || ||| |||||||||||||| |||||| |
|
|
| T |
3368875 |
tttagttatttgcttgtgagatcgactatgaaagttatctacctacttcgacgcatgatggagcaatatcagacggataaaaaaagacttgcacttagtt |
3368974 |
T |
|
| Q |
202 |
ttcacttatttggggaaggcgtatgatagagtacctagagagatt |
246 |
Q |
| |
|
||| | |||||| ||| |||||||||||| |||||||||||| |
|
|
| T |
3368975 |
ttctttgatttgg---aggtgtatgatagagtgcctagagagatt |
3369016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 168
Target Start/End: Original strand, 27916590 - 27916753
Alignment:
| Q |
3 |
gaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataactta |
102 |
Q |
| |
|
||||||||||||| ||| | ||||||||||||||||||||||| |||||||| ||||| |||||| |||||||| |||| || |||| |||||| | |
|
|
| T |
27916590 |
gaattataggggatataaattgatgagtcataccatgaagttatgagaaagggtgattgaacgaagaataagaaaagagacccaagttagtgataaccaa |
27916689 |
T |
|
| Q |
103 |
tttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcga |
168 |
Q |
| |
|
|||||||||||| || |||||||| ||||| |||| |||||||||| ||| |||| ||||||| |
|
|
| T |
27916690 |
tttggttttatgtct--aaggtcgaccatggatgtgatttacttacttccacgtgtgatggagcga |
27916753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 248
Target Start/End: Original strand, 48220971 - 48221038
Alignment:
| Q |
181 |
aaaaaagacttgcaattagttttcacttatttggggaaggcgtatgatagagtacctagagagatttt |
248 |
Q |
| |
|
|||||||||||||| |||||||||| | |||||| ||| ||||||||||| | |||||||| ||||| |
|
|
| T |
48220971 |
aaaaaagacttgcacttagttttcattgatttggagaaaacgtatgatagattgcctagagatatttt |
48221038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 50630414 - 50630343
Alignment:
| Q |
178 |
gataaaaaagacttgcaattagttttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
251 |
Q |
| |
|
||||||||||||||||| |||||||||| | |||||| |||||| |||| ||||| ||| |||| |||||||| |
|
|
| T |
50630414 |
gataaaaaagacttgcacttagttttcattgatttggagaaggcatatg--agagtgcctcgagatattttgtg |
50630343 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0113 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0113
Description:
Target: scaffold0113; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 13530 - 13280
Alignment:
| Q |
1 |
gcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataact |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||| | |||||| |||| |||||| |
|
|
| T |
13530 |
gcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaatggtgattgaacgaagactaagagagaagactccagttacggataacc |
13431 |
T |
|
| Q |
101 |
tatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagt |
200 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| || ||||||||||||||||||| |||||||||| || ||||| |||||||| || ||||| |
|
|
| T |
13430 |
aatttggttttatgcttgggaggtcgactatggaaacgatctacttacttcgacgcgtggtggagcgatatatgacggataataaagacttacacttagt |
13331 |
T |
|
| Q |
201 |
tttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
251 |
Q |
| |
|
||||| | |||||| |||||||||||||||||| ||||||||||||||||| |
|
|
| T |
13330 |
tttcattgatttggagaaggcgtatgatagagttcctagagagattttgtg |
13280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0018 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: scaffold0018
Description:
Target: scaffold0018; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 43 - 251
Target Start/End: Original strand, 30520 - 30728
Alignment:
| Q |
43 |
ttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataacttatttggttttatgcctgggaggtcgactatggaagtgaact |
142 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||||| |||||| |||| |||||| ||||||||||||||||||||||||||||||||||| | || |
|
|
| T |
30520 |
ttatgggaaagggtgattgaaagaagactaagaaaggagactcgagttacggataaccaatttggttttatgcctgggaggtcgactatggaagcaatct |
30619 |
T |
|
| Q |
143 |
acttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagttttcacttatttggggaaggcgtatgatagagtacctagaga |
242 |
Q |
| |
|
||||||||| |||||||| | ||||||||| || ||||||||||||||||| |||||||||| | | |||| |||||||||||||||||||| ||||| |
|
|
| T |
30620 |
acttacttcaacgcgtgatgaagcgatatcagacggataaaaaagacttgcacttagttttcattgaattggaaaaggcgtatgatagagtaccgagaga |
30719 |
T |
|
| Q |
243 |
gattttgtg |
251 |
Q |
| |
|
||||||||| |
|
|
| T |
30720 |
gattttgtg |
30728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0045 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0045
Description:
Target: scaffold0045; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 66 - 233
Target Start/End: Complemental strand, 90297 - 90130
Alignment:
| Q |
66 |
aagactaagaaaatagactcatgttaaagataacttatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggag |
165 |
Q |
| |
|
||||||||||||| |||||| |||| |||||| ||||| ||||||||| |||||||| ||||||||||||| ||||||| |||||| ||| ||| |
|
|
| T |
90297 |
aagactaagaaaagagactcgagttacggataaccaatttgattttatgccagggaggtcaactatggaagtgatctacttaattcgacatgtggtcgag |
90198 |
T |
|
| Q |
166 |
cgatatcgaacagataaaaaagacttgcaattagttttcacttatttggggaaggcgtatgatagagt |
233 |
Q |
| |
|
|| ||||| || |||||||||||||| || |||||||||| | |||||| |||||||||||||||||| |
|
|
| T |
90197 |
cgttatcggacggataaaaaagacttacacttagttttcattgatttggagaaggcgtatgatagagt |
90130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0171 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0171
Description:
Target: scaffold0171; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 112 - 229
Target Start/End: Original strand, 5568 - 5685
Alignment:
| Q |
112 |
atgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagttttcacttatt |
211 |
Q |
| |
|
|||| ||||||||||| ||| |||| || | ||||||| ||| |||| |||||||||| || ||||||||| | | ||| |||||||||| ||||| |
|
|
| T |
5568 |
atgcatgggaggtcgaatatcgaagcgatttccttacttaaacgtgtgatggagcgatatttgactgataaaaaacaatcgcacttagttttcatttatt |
5667 |
T |
|
| Q |
212 |
tggggaaggcgtatgata |
229 |
Q |
| |
|
||| |||||||||||||| |
|
|
| T |
5668 |
tggagaaggcgtatgata |
5685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0220 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0220
Description:
Target: scaffold0220; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 142 - 205
Target Start/End: Complemental strand, 25340 - 25277
Alignment:
| Q |
142 |
tacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagttttca |
205 |
Q |
| |
|
|||||||||||||| ||| ||| |||||| ||||||||||||||||||||| ||||||||| |
|
|
| T |
25340 |
tacttacttcgacgtttgatagagtgatatcaaacagataaaaaagacttgcacctagttttca |
25277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0140 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0140
Description:
Target: scaffold0140; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 128
Target Start/End: Complemental strand, 15001 - 14931
Alignment:
| Q |
58 |
attgagcgaagactaagaaaatagactcatgttaaagataacttatttggttttatgcctgggaggtcgac |
128 |
Q |
| |
|
|||||||||||||||| |||| |||||||| ||| |||| | ||||||||||||| || |||||||||| |
|
|
| T |
15001 |
attgagcgaagactaataaaagagactcatattatcaataattaatttggttttatgtctaggaggtcgac |
14931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University