View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8590_low_33 (Length: 237)

Name: NF8590_low_33
Description: NF8590
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8590_low_33
NF8590_low_33
[»] chr2 (50 HSPs)
chr2 (1-236)||(40332092-40332327)
chr2 (1-236)||(31967904-31968138)
chr2 (1-236)||(28550779-28551013)
chr2 (1-236)||(1586893-1587128)
chr2 (1-195)||(22776190-22776383)
chr2 (1-195)||(22781568-22781761)
chr2 (1-231)||(22785521-22785750)
chr2 (1-236)||(44840439-44840670)
chr2 (3-236)||(3277037-3277270)
chr2 (8-134)||(14581527-14581653)
chr2 (1-231)||(33074231-33074470)
chr2 (1-231)||(34321792-34322031)
chr2 (1-195)||(23392569-23392763)
chr2 (1-231)||(31327821-31328061)
chr2 (1-231)||(31334542-31334782)
chr2 (14-237)||(20151884-20152117)
chr2 (3-201)||(28701115-28701322)
chr2 (1-237)||(28711547-28711793)
chr2 (1-195)||(22802465-22802668)
chr2 (2-231)||(35743858-35744094)
chr2 (1-233)||(31800741-31800982)
chr2 (1-231)||(30557175-30557416)
chr2 (1-236)||(6392638-6392884)
chr2 (1-237)||(6573972-6574219)
chr2 (14-200)||(45087069-45087266)
chr2 (2-81)||(19540422-19540501)
chr2 (8-82)||(22317605-22317679)
chr2 (2-121)||(23235013-23235141)
chr2 (2-78)||(24377107-24377183)
chr2 (2-81)||(13963993-13964072)
chr2 (2-81)||(18376921-18377000)
chr2 (2-81)||(25829140-25829219)
chr2 (1-81)||(38781404-38781484)
chr2 (14-81)||(20568765-20568832)
chr2 (2-81)||(22455005-22455084)
chr2 (2-81)||(30666995-30667074)
chr2 (3-54)||(40782484-40782535)
chr2 (2-80)||(21537264-21537342)
chr2 (2-78)||(10009768-10009844)
chr2 (2-78)||(25037277-25037353)
chr2 (2-78)||(25041384-25041460)
chr2 (2-54)||(39037684-39037736)
chr2 (2-81)||(22188117-22188196)
chr2 (78-121)||(24576126-24576169)
chr2 (170-236)||(24377286-24377352)
chr2 (2-78)||(9015388-9015462)
chr2 (3-51)||(24576042-24576090)
chr2 (2-54)||(25189404-25189456)
chr2 (2-54)||(30621222-30621274)
chr2 (2-54)||(30623843-30623895)
[»] chr4 (54 HSPs)
chr4 (1-236)||(17398546-17398780)
chr4 (1-236)||(22190851-22191087)
chr4 (1-231)||(40860672-40860902)
chr4 (1-236)||(6517490-6517734)
chr4 (1-236)||(10692856-10693100)
chr4 (1-236)||(10906622-10906866)
chr4 (1-236)||(39419606-39419840)
chr4 (17-236)||(15475013-15475233)
chr4 (1-195)||(3105323-3105525)
chr4 (1-236)||(9751410-9751646)
chr4 (1-199)||(20977462-20977658)
chr4 (1-237)||(413007-413252)
chr4 (8-140)||(16940028-16940169)
chr4 (1-199)||(27188548-27188744)
chr4 (123-236)||(14571161-14571273)
chr4 (1-201)||(54679935-54680142)
chr4 (14-232)||(38513896-38514116)
chr4 (1-231)||(8105642-8105883)
chr4 (8-235)||(19884714-19884951)
chr4 (1-81)||(25651130-25651210)
chr4 (3-81)||(37435561-37435639)
chr4 (1-81)||(29121375-29121455)
chr4 (170-231)||(17247426-17247487)
chr4 (14-199)||(3499560-3499745)
chr4 (2-81)||(12601107-12601186)
chr4 (2-81)||(37985638-37985717)
chr4 (78-232)||(55731870-55732023)
chr4 (1-201)||(56532957-56533168)
chr4 (3-81)||(10072942-10073020)
chr4 (14-121)||(3483739-3483855)
chr4 (157-237)||(3793293-3793373)
chr4 (14-121)||(9140930-9141046)
chr4 (2-78)||(55380296-55380372)
chr4 (2-81)||(22675546-22675625)
chr4 (70-199)||(17700708-17700835)
chr4 (1-78)||(14604936-14605013)
chr4 (1-78)||(16853508-16853585)
chr4 (1-78)||(45833399-45833476)
chr4 (1-61)||(1672394-1672454)
chr4 (1-61)||(1674869-1674929)
chr4 (2-54)||(3395596-3395648)
chr4 (14-81)||(13576140-13576207)
chr4 (8-54)||(19621114-19621160)
chr4 (1-54)||(6641689-6641742)
chr4 (8-81)||(16632452-16632525)
chr4 (2-78)||(19911909-19911986)
chr4 (157-201)||(13576011-13576055)
chr4 (2-54)||(40846105-40846157)
chr4 (177-236)||(16853673-16853732)
chr4 (8-121)||(14904333-14904455)
chr4 (170-231)||(3395775-3395836)
chr4 (2-81)||(12811204-12811280)
chr4 (2-51)||(19666378-19666427)
chr4 (2-78)||(29680573-29680649)
[»] chr1 (54 HSPs)
chr1 (1-231)||(46088999-46089229)
chr1 (1-236)||(21134994-21135230)
chr1 (1-224)||(10250996-10251218)
chr1 (1-231)||(21702824-21703062)
chr1 (1-228)||(21204765-21204993)
chr1 (1-236)||(21984606-21984841)
chr1 (1-236)||(21120898-21121134)
chr1 (8-236)||(42284645-42284872)
chr1 (1-236)||(37642258-37642494)
chr1 (1-216)||(30572207-30572430)
chr1 (1-231)||(48570063-48570301)
chr1 (1-236)||(44821371-44821615)
chr1 (1-231)||(25448395-25448636)
chr1 (1-237)||(35040176-35040421)
chr1 (1-231)||(2327270-2327510)
chr1 (1-192)||(23024798-23024987)
chr1 (1-237)||(2834700-2834944)
chr1 (1-199)||(19215622-19215818)
chr1 (1-119)||(36134200-36134326)
chr1 (3-227)||(22427192-22427425)
chr1 (1-81)||(22600172-22600252)
chr1 (1-237)||(39200817-39201062)
chr1 (1-200)||(7744952-7745160)
chr1 (1-227)||(22464643-22464879)
chr1 (3-81)||(32785927-32786005)
chr1 (3-81)||(35401821-35401899)
chr1 (1-82)||(1900355-1900436)
chr1 (1-81)||(14263441-14263521)
chr1 (2-121)||(22201677-22201805)
chr1 (2-81)||(28492394-28492473)
chr1 (160-236)||(21544191-21544268)
chr1 (1-82)||(38282577-38282657)
chr1 (1-81)||(2268541-2268621)
chr1 (1-81)||(7309829-7309908)
chr1 (1-81)||(21191855-21191935)
chr1 (1-81)||(29215807-29215887)
chr1 (2-81)||(33256341-33256420)
chr1 (2-81)||(33276513-33276592)
chr1 (8-78)||(12284440-12284510)
chr1 (170-231)||(19170181-19170242)
chr1 (8-81)||(19717541-19717614)
chr1 (1-54)||(22153867-22153920)
chr1 (2-78)||(20954466-20954542)
chr1 (170-234)||(32785764-32785828)
chr1 (3-121)||(2267101-2267228)
chr1 (2-81)||(16235286-16235365)
chr1 (3-54)||(30893104-30893155)
chr1 (170-236)||(28492228-28492294)
chr1 (8-81)||(17024954-17025027)
chr1 (207-236)||(25448360-25448389)
chr1 (1-86)||(34255501-34255586)
chr1 (2-78)||(1577878-1577954)
chr1 (208-236)||(12613605-12613633)
chr1 (9-77)||(23036521-23036589)
[»] scaffold1359 (2 HSPs)
scaffold1359 (1-236)||(1621-1855)
scaffold1359 (1-195)||(552-755)
[»] scaffold0056 (2 HSPs)
scaffold0056 (1-231)||(25535-25765)
scaffold0056 (1-236)||(34669-34904)
[»] chr8 (59 HSPs)
chr8 (1-236)||(6407729-6407963)
chr8 (1-236)||(14989364-14989599)
chr8 (1-236)||(13430540-13430776)
chr8 (1-231)||(43639786-43640016)
chr8 (1-236)||(21301025-21301260)
chr8 (14-236)||(21288419-21288641)
chr8 (1-236)||(18151569-18151794)
chr8 (1-232)||(40845296-40845535)
chr8 (1-232)||(15335996-15336236)
chr8 (1-232)||(15425061-15425301)
chr8 (1-232)||(15516365-15516605)
chr8 (14-200)||(33560173-33560359)
chr8 (3-231)||(22673783-22674020)
chr8 (1-236)||(1745162-1745398)
chr8 (8-231)||(36105205-36105437)
chr8 (1-231)||(22663119-22663358)
chr8 (8-237)||(23185129-23185367)
chr8 (1-231)||(9320571-9320812)
chr8 (3-201)||(24551279-24551486)
chr8 (1-201)||(45538378-45538587)
chr8 (1-231)||(17797425-17797664)
chr8 (1-236)||(24832960-24833205)
chr8 (1-121)||(16207309-16207438)
chr8 (2-81)||(16188988-16189067)
chr8 (145-232)||(3598254-3598341)
chr8 (8-81)||(23263680-23263753)
chr8 (1-81)||(1237640-1237720)
chr8 (2-82)||(21932887-21932967)
chr8 (2-81)||(12757831-12757910)
chr8 (2-121)||(17441827-17441954)
chr8 (1-121)||(19943238-19943368)
chr8 (2-80)||(24646342-24646420)
chr8 (174-231)||(43774053-43774110)
chr8 (2-78)||(602791-602867)
chr8 (14-78)||(18679831-18679895)
chr8 (2-78)||(18719005-18719081)
chr8 (2-78)||(39693539-39693615)
chr8 (1-81)||(45567969-45568049)
chr8 (14-81)||(16681371-16681438)
chr8 (2-81)||(19156200-19156279)
chr8 (14-81)||(33082873-33082940)
chr8 (8-54)||(20382489-20382535)
chr8 (14-48)||(45292842-45292876)
chr8 (1-81)||(18685465-18685545)
chr8 (1-81)||(18722714-18722794)
chr8 (1-81)||(18731059-18731139)
chr8 (171-236)||(23271038-23271105)
chr8 (2-81)||(17914463-17914542)
chr8 (170-229)||(21933066-21933125)
chr8 (1-81)||(30421496-30421577)
chr8 (2-81)||(43644900-43644979)
chr8 (170-236)||(12757665-12757731)
chr8 (170-236)||(19156379-19156445)
chr8 (2-79)||(18321229-18321306)
chr8 (2-51)||(25164074-25164123)
chr8 (2-50)||(17267478-17267526)
chr8 (14-78)||(17525800-17525864)
chr8 (22-82)||(18121176-18121236)
chr8 (157-201)||(30421367-30421411)
[»] chr5 (48 HSPs)
chr5 (1-236)||(28464235-28464469)
chr5 (1-236)||(3245328-3245571)
chr5 (1-236)||(10848780-10849015)
chr5 (1-236)||(35931900-35932136)
chr5 (1-211)||(25930076-25930286)
chr5 (1-231)||(35986132-35986362)
chr5 (1-216)||(9088976-9089190)
chr5 (1-236)||(15516976-15517220)
chr5 (1-236)||(4887029-4887273)
chr5 (1-231)||(29138299-29138536)
chr5 (1-231)||(26759156-26759395)
chr5 (1-231)||(21660219-21660449)
chr5 (1-231)||(30742987-30743226)
chr5 (1-231)||(11993895-11994134)
chr5 (1-135)||(26765505-26765649)
chr5 (1-231)||(33933274-33933517)
chr5 (145-236)||(30115762-30115853)
chr5 (1-232)||(42243687-42243928)
chr5 (1-133)||(28139614-28139755)
chr5 (1-85)||(30115883-30115967)
chr5 (87-237)||(5429985-5430136)
chr5 (1-232)||(14086427-14086669)
chr5 (3-237)||(33022673-33022916)
chr5 (1-199)||(23391535-23391733)
chr5 (2-81)||(7745743-7745822)
chr5 (1-81)||(32160773-32160853)
chr5 (1-81)||(642757-642837)
chr5 (1-81)||(13545562-13545642)
chr5 (2-78)||(23413027-23413103)
chr5 (2-74)||(26784362-26784434)
chr5 (2-81)||(21910564-21910643)
chr5 (2-81)||(41566484-41566563)
chr5 (170-236)||(26784541-26784607)
chr5 (1-81)||(20550902-20550981)
chr5 (14-78)||(21072293-21072357)
chr5 (1-195)||(31117884-31118088)
chr5 (3-54)||(19536378-19536429)
chr5 (165-227)||(23478534-23478596)
chr5 (2-50)||(89503-89551)
chr5 (2-54)||(6499247-6499299)
chr5 (2-54)||(12352872-12352924)
chr5 (2-81)||(9398784-9398863)
chr5 (2-81)||(21199053-21199132)
chr5 (170-233)||(41566321-41566384)
chr5 (3-81)||(23881076-23881154)
chr5 (1-78)||(11208039-11208115)
chr5 (14-54)||(6512505-6512545)
chr5 (2-54)||(17814976-17815028)
[»] chr7 (73 HSPs)
chr7 (1-236)||(27871725-27871961)
chr7 (1-236)||(14425454-14425688)
chr7 (1-231)||(48062741-48062971)
chr7 (1-236)||(19339166-19339401)
chr7 (8-236)||(32264633-32264862)
chr7 (1-146)||(1293037-1293182)
chr7 (1-236)||(21381344-21381580)
chr7 (1-231)||(8182937-8183175)
chr7 (1-133)||(24794732-24794866)
chr7 (8-216)||(2265446-2265663)
chr7 (1-232)||(4821481-4821720)
chr7 (1-231)||(48805800-48806030)
chr7 (1-231)||(4411883-4412113)
chr7 (1-236)||(16111791-16112035)
chr7 (14-231)||(12174252-12174479)
chr7 (1-195)||(14426554-14426757)
chr7 (1-231)||(35952599-35952839)
chr7 (3-237)||(48236808-48237051)
chr7 (20-237)||(16542926-16543152)
chr7 (20-237)||(16622510-16622736)
chr7 (14-237)||(28622262-28622494)
chr7 (31-197)||(15704445-15704620)
chr7 (1-81)||(21283444-21283524)
chr7 (1-195)||(30944271-30944474)
chr7 (1-81)||(19711084-19711164)
chr7 (1-81)||(23280029-23280109)
chr7 (14-81)||(33605705-33605772)
chr7 (170-237)||(33691616-33691683)
chr7 (15-121)||(13692372-13692478)
chr7 (1-81)||(28409046-28409126)
chr7 (2-81)||(13137966-13138045)
chr7 (3-78)||(29935432-29935507)
chr7 (3-81)||(30945427-30945505)
chr7 (70-231)||(4428999-4429162)
chr7 (1-81)||(15467923-15468003)
chr7 (1-81)||(19237114-19237194)
chr7 (157-237)||(33605858-33605938)
chr7 (1-81)||(44467071-44467151)
chr7 (2-81)||(2913679-2913758)
chr7 (2-81)||(13880112-13880191)
chr7 (14-81)||(16309978-16310045)
chr7 (8-81)||(331659-331731)
chr7 (2-122)||(16316578-16316707)
chr7 (2-82)||(9069570-9069650)
chr7 (2-54)||(13648737-13648789)
chr7 (1-81)||(22578092-22578172)
chr7 (1-81)||(24788148-24788228)
chr7 (14-81)||(9709873-9709940)
chr7 (2-77)||(15088528-15088603)
chr7 (2-81)||(21692295-21692374)
chr7 (1-72)||(33691792-33691863)
chr7 (2-81)||(39284635-39284714)
chr7 (170-236)||(2913513-2913579)
chr7 (2-52)||(5000922-5000972)
chr7 (170-236)||(21695588-21695654)
chr7 (170-236)||(30026092-30026158)
chr7 (170-236)||(39284470-39284536)
chr7 (170-236)||(44467252-44467318)
chr7 (191-232)||(5826170-5826211)
chr7 (157-201)||(9709744-9709788)
chr7 (2-54)||(13018603-13018655)
chr7 (2-78)||(13730749-13730825)
chr7 (1-81)||(14193121-14193201)
chr7 (17-81)||(21695424-21695488)
chr7 (2-81)||(10883244-10883323)
chr7 (8-54)||(11792921-11792967)
chr7 (8-54)||(12366846-12366892)
chr7 (8-78)||(13260689-13260759)
chr7 (170-236)||(15088707-15088773)
chr7 (170-236)||(331831-331899)
chr7 (207-236)||(8183166-8183195)
chr7 (188-236)||(2500243-2500291)
chr7 (17-81)||(30025928-30025992)
[»] chr3 (59 HSPs)
chr3 (3-236)||(46796282-46796514)
chr3 (1-236)||(30054131-30054366)
chr3 (1-232)||(21605572-21605803)
chr3 (14-236)||(40850991-40851213)
chr3 (1-232)||(21636588-21636819)
chr3 (1-231)||(49666325-49666554)
chr3 (1-231)||(14955437-14955676)
chr3 (1-224)||(21640877-21641108)
chr3 (1-231)||(2785074-2785314)
chr3 (1-231)||(1727935-1728164)
chr3 (1-195)||(5213587-5213789)
chr3 (3-201)||(20627371-20627578)
chr3 (1-231)||(24775442-24775683)
chr3 (1-199)||(9699989-9700185)
chr3 (1-237)||(47207716-47207964)
chr3 (1-81)||(29855419-29855499)
chr3 (1-237)||(11223573-11223818)
chr3 (8-121)||(14969344-14969466)
chr3 (1-231)||(33583239-33583480)
chr3 (1-121)||(53056747-53056876)
chr3 (1-237)||(2561198-2561445)
chr3 (1-77)||(22140774-22140850)
chr3 (15-231)||(46349754-46349979)
chr3 (1-81)||(38177712-38177792)
chr3 (2-81)||(13948347-13948426)
chr3 (3-81)||(11909093-11909171)
chr3 (8-81)||(13780653-13780726)
chr3 (160-236)||(15833566-15833643)
chr3 (1-82)||(18121690-18121771)
chr3 (1-82)||(18142820-18142901)
chr3 (2-79)||(28582117-28582194)
chr3 (1-81)||(6090742-6090822)
chr3 (2-78)||(20646165-20646241)
chr3 (1-81)||(40799884-40799964)
chr3 (1-81)||(49553558-49553638)
chr3 (1-60)||(11868279-11868338)
chr3 (170-237)||(11869256-11869323)
chr3 (14-81)||(13824092-13824159)
chr3 (3-78)||(16658690-16658765)
chr3 (2-81)||(41495010-41495089)
chr3 (160-236)||(10529506-10529583)
chr3 (2-87)||(12963149-12963233)
chr3 (1-146)||(37412615-37412759)
chr3 (8-81)||(37467350-37467423)
chr3 (24-81)||(45858818-45858875)
chr3 (1-81)||(16032535-16032615)
chr3 (14-54)||(50300246-50300286)
chr3 (3-78)||(14393076-14393151)
chr3 (3-81)||(47405490-47405568)
chr3 (170-231)||(28582296-28582357)
chr3 (1-81)||(12388941-12389021)
chr3 (1-61)||(25398344-25398404)
chr3 (3-54)||(17239018-17239069)
chr3 (2-81)||(49642831-49642910)
chr3 (176-231)||(50300396-50300451)
chr3 (1-78)||(12726302-12726379)
chr3 (2-54)||(22804119-22804171)
chr3 (2-54)||(31303397-31303449)
chr3 (157-201)||(47405361-47405405)
[»] scaffold0249 (1 HSPs)
scaffold0249 (1-236)||(17631-17865)
[»] chr6 (45 HSPs)
chr6 (1-236)||(19065921-19066156)
chr6 (1-232)||(22076305-22076545)
chr6 (1-200)||(12349004-12349211)
chr6 (1-231)||(21618255-21618494)
chr6 (1-232)||(33351827-33352064)
chr6 (1-236)||(16877224-16877468)
chr6 (1-237)||(15954714-15954959)
chr6 (1-220)||(16336138-16336366)
chr6 (1-232)||(26589610-26589844)
chr6 (1-140)||(12423272-12423420)
chr6 (14-199)||(17316467-17316650)
chr6 (1-224)||(19832938-19833171)
chr6 (1-229)||(20487818-20488056)
chr6 (1-96)||(19482763-19482858)
chr6 (2-121)||(19086170-19086288)
chr6 (8-237)||(20730597-20730835)
chr6 (146-235)||(21235278-21235367)
chr6 (1-82)||(32544276-32544357)
chr6 (1-82)||(9717854-9717935)
chr6 (1-82)||(22802152-22802233)
chr6 (1-81)||(15531682-15531762)
chr6 (170-236)||(34451563-34451626)
chr6 (2-81)||(15987245-15987324)
chr6 (157-235)||(16265045-16265123)
chr6 (1-81)||(14100498-14100578)
chr6 (2-121)||(15302212-15302340)
chr6 (1-81)||(21235136-21235216)
chr6 (157-237)||(22802317-22802397)
chr6 (2-78)||(24116840-24116916)
chr6 (1-81)||(29918028-29918108)
chr6 (165-236)||(17608217-17608288)
chr6 (160-231)||(22386965-22387036)
chr6 (3-81)||(21625114-21625192)
chr6 (1-78)||(16265211-16265288)
chr6 (8-61)||(17381539-17381592)
chr6 (8-81)||(18435574-18435647)
chr6 (1-57)||(13435543-13435599)
chr6 (14-81)||(19688790-19688857)
chr6 (2-82)||(26972285-26972363)
chr6 (2-78)||(20112761-20112837)
chr6 (2-81)||(18378326-18378405)
chr6 (170-237)||(32544456-32544523)
chr6 (170-231)||(21128399-21128460)
chr6 (2-54)||(12715505-12715557)
chr6 (1-81)||(26943587-26943667)
[»] scaffold0473 (1 HSPs)
scaffold0473 (1-236)||(2568-2791)
[»] scaffold0352 (1 HSPs)
scaffold0352 (1-236)||(686-921)
[»] scaffold0217 (3 HSPs)
scaffold0217 (1-232)||(9571-9810)
scaffold0217 (1-231)||(21992-22231)
scaffold0217 (2-82)||(19043-19123)
[»] scaffold0015 (1 HSPs)
scaffold0015 (1-236)||(60814-61058)
[»] scaffold0527 (2 HSPs)
scaffold0527 (21-236)||(7963-8186)
scaffold0527 (113-236)||(1-123)
[»] scaffold0414 (1 HSPs)
scaffold0414 (1-229)||(7019-7256)
[»] scaffold0176 (1 HSPs)
scaffold0176 (3-236)||(9168-9409)
[»] scaffold0011 (3 HSPs)
scaffold0011 (45-232)||(65289-65484)
scaffold0011 (45-232)||(144334-144529)
scaffold0011 (1-81)||(164966-165046)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-231)||(215358-215597)
[»] scaffold0387 (1 HSPs)
scaffold0387 (1-231)||(7392-7622)
[»] scaffold0069 (1 HSPs)
scaffold0069 (1-216)||(5209-5425)
[»] scaffold0043 (1 HSPs)
scaffold0043 (14-232)||(78226-78453)
[»] scaffold0471 (1 HSPs)
scaffold0471 (8-231)||(3322-3554)
[»] scaffold0439 (1 HSPs)
scaffold0439 (1-231)||(6601-6840)
[»] scaffold0247 (2 HSPs)
scaffold0247 (103-234)||(23421-23551)
scaffold0247 (1-85)||(25415-25499)
[»] scaffold0045 (1 HSPs)
scaffold0045 (1-123)||(87578-87700)
[»] scaffold0028 (1 HSPs)
scaffold0028 (3-232)||(5459-5700)
[»] scaffold0005 (2 HSPs)
scaffold0005 (123-236)||(246103-246215)
scaffold0005 (1-78)||(212365-212442)
[»] scaffold0035 (2 HSPs)
scaffold0035 (1-231)||(99069-99305)
scaffold0035 (14-130)||(19433-19559)
[»] scaffold0004 (4 HSPs)
scaffold0004 (1-195)||(211409-211612)
scaffold0004 (2-78)||(220250-220326)
scaffold0004 (2-81)||(377579-377658)
scaffold0004 (1-77)||(244308-244384)
[»] scaffold0280 (1 HSPs)
scaffold0280 (1-121)||(2702-2830)
[»] scaffold1331 (2 HSPs)
scaffold1331 (14-193)||(1598-1786)
scaffold1331 (188-237)||(466-515)
[»] scaffold0003 (2 HSPs)
scaffold0003 (157-237)||(89910-89990)
scaffold0003 (1-81)||(90075-90155)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-199)||(735-933)
[»] scaffold0151 (1 HSPs)
scaffold0151 (67-231)||(11447-11611)
[»] scaffold0084 (3 HSPs)
scaffold0084 (1-81)||(365-445)
scaffold0084 (2-81)||(49344-49423)
scaffold0084 (2-54)||(32497-32549)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-121)||(27400-27529)
[»] scaffold0411 (1 HSPs)
scaffold0411 (2-121)||(12221-12349)
[»] scaffold0251 (1 HSPs)
scaffold0251 (2-82)||(7715-7795)
[»] scaffold0211 (1 HSPs)
scaffold0211 (1-81)||(15642-15722)
[»] scaffold0132 (1 HSPs)
scaffold0132 (1-81)||(38105-38185)
[»] scaffold0116 (1 HSPs)
scaffold0116 (1-81)||(20991-21071)
[»] scaffold0771 (1 HSPs)
scaffold0771 (2-81)||(487-566)
[»] scaffold0422 (1 HSPs)
scaffold0422 (165-236)||(11929-12000)
[»] scaffold0023 (1 HSPs)
scaffold0023 (3-121)||(103585-103712)
[»] scaffold0220 (1 HSPs)
scaffold0220 (3-81)||(1817-1895)
[»] scaffold0227 (2 HSPs)
scaffold0227 (1-121)||(22687-22816)
scaffold0227 (170-227)||(22867-22924)
[»] scaffold0026 (2 HSPs)
scaffold0026 (14-122)||(60040-60157)
scaffold0026 (8-77)||(7944-8013)
[»] scaffold0161 (2 HSPs)
scaffold0161 (1-81)||(10128-10208)
scaffold0161 (1-54)||(14819-14872)
[»] scaffold0207 (2 HSPs)
scaffold0207 (14-229)||(10744-10958)
scaffold0207 (184-229)||(20814-20859)
[»] scaffold0177 (1 HSPs)
scaffold0177 (171-236)||(20248-20314)
[»] scaffold0426 (1 HSPs)
scaffold0426 (2-81)||(13583-13662)
[»] scaffold0359 (1 HSPs)
scaffold0359 (2-81)||(5710-5789)
[»] scaffold0050 (1 HSPs)
scaffold0050 (165-236)||(35401-35472)
[»] scaffold0908 (1 HSPs)
scaffold0908 (8-86)||(3910-3988)
[»] scaffold0065 (1 HSPs)
scaffold0065 (3-81)||(1703-1781)
[»] scaffold0861 (1 HSPs)
scaffold0861 (4-81)||(4967-5044)
[»] scaffold1747 (1 HSPs)
scaffold1747 (1-81)||(1328-1408)
[»] scaffold1745 (1 HSPs)
scaffold1745 (1-81)||(3-83)
[»] scaffold0570 (1 HSPs)
scaffold0570 (160-231)||(1538-1610)
[»] scaffold0364 (1 HSPs)
scaffold0364 (1-81)||(6018-6098)
[»] scaffold0337 (1 HSPs)
scaffold0337 (2-121)||(14660-14788)
[»] scaffold0120 (4 HSPs)
scaffold0120 (1-81)||(36795-36875)
scaffold0120 (1-81)||(42130-42210)
scaffold0120 (207-236)||(36615-36644)
scaffold0120 (207-236)||(42361-42390)
[»] scaffold0022 (2 HSPs)
scaffold0022 (170-230)||(39616-39676)
scaffold0022 (170-230)||(137676-137736)
[»] scaffold0324 (1 HSPs)
scaffold0324 (2-81)||(9968-10047)
[»] scaffold0290 (2 HSPs)
scaffold0290 (2-81)||(18641-18720)
scaffold0290 (172-200)||(18511-18539)
[»] scaffold0210 (1 HSPs)
scaffold0210 (3-78)||(1673-1748)
[»] scaffold0146 (1 HSPs)
scaffold0146 (3-54)||(15130-15181)
[»] scaffold0083 (1 HSPs)
scaffold0083 (14-81)||(25995-26062)
[»] scaffold0530 (1 HSPs)
scaffold0530 (8-54)||(2042-2088)
[»] scaffold0193 (1 HSPs)
scaffold0193 (16-81)||(15819-15885)
[»] scaffold0047 (1 HSPs)
scaffold0047 (3-81)||(9916-9994)
[»] scaffold0479 (1 HSPs)
scaffold0479 (1-78)||(9980-10057)


Alignment Details
Target: chr2 (Bit Score: 196; Significance: 1e-107; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 40332092 - 40332327
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||    
T  40332092 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagccgttgctat 40332191  T
Q  101 acttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgat 200  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  40332192 acttttccagtcttctgcaattttaggcgagtttgaatcctagaaagcagctttgaaagctttgggttacatctcctgatgaactgcagcttctggtgat 40332291  T
Q  201 tcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    ||||| ||||| |||||||||||| |||||||||||    
T  40332292 tcacagcttctgatgaacttgcttatgatgacgtca 40332327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 31968138 - 31967904
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||| ||||||||||| |||||||||    
T  31968138 agagtagtggagatagtggttgtacacttcgtacaaacgtattatgtcaacgctctttgaagaataagcatccaatgcatttcaaaatagttgttgctat 31968039  T
Q  101 acttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgat 200  Q
    ||||||||||||||||||||||||| ||||||||| ||||| | ||||||||||  | |||||  ||| ||||| |||||||||||||||||||||||||    
T  31968038 acttttccagtcttctgcaattttatgcgagtttgaatccttg-aaacaacttttgaggctttaagttgcatcttctgatgaactgcagcttctggtgat 31967940  T
Q  201 tcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    ||||||||||| ||||||||||||||||||| ||||    
T  31967939 tcacaacttcttatgaacttgcttctgatgatgtca 31967904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 28551013 - 28550779
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||| ||||    
T  28551013 agagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagttgtttctat 28550914  T
Q  101 acttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgat 200  Q
    ||||||||||||||||||||||||||||||||||| ||||| | ||||| ||||  | | |||   || |||||||||||||||||||||||||||||||    
T  28550913 acttttccagtcttctgcaattttaggcgagtttgaatccttg-aaacagcttttgaggttttaaattgcatctcctgatgaactgcagcttctggtgat 28550815  T
Q  201 tcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    ||||| ||||| |||||||||||| |||||||||||    
T  28550814 tcacagcttctgatgaacttgcttatgatgacgtca 28550779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 1587128 - 1586893
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||| ||||  ||    
T  1587128 agagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaattagcatccaatgcctttcaaaatagccgttgtaat 1587029  T
Q  101 acttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtga 199  Q
    |||||| |||||||||||||| || ||  ||||||| |||||   ||||||||||  |||||||  ||| |||||||||||||||| |||||||||||||    
T  1587028 actttttcagtcttctgcaatcttcagatgagtttgaatcct-ttaaacaacttttgaagctttaagttccatctcctgatgaactccagcttctggtga 1586930  T
Q  200 ttcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    ||| || ||||| ||||||||| ||||||||||||||    
T  1586929 ttctcagcttctgatgaacttgtttctgatgacgtca 1586893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 22776383 - 22776190
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||    
T  22776383 agagtactggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagccgttgctat 22776284  T
Q  101 acttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctg 195  Q
    ||||||| |||||| ||||||||||||||||| || | ||| | ||||||||||  |||||||  ||| |||||||||||||||| |||||||||    
T  22776283 acttttcaagtcttttgcaattttaggcgagtctgaaaccttg-aaacaacttttgaagctttaagttgcatctcctgatgaactacagcttctg 22776190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 22781761 - 22781568
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||    
T  22781761 agagtactggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagccgttgctat 22781662  T
Q  101 acttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctg 195  Q
    ||||||| |||||| ||||||||||||||||| || | ||| | ||||||||||  |||||||  ||| |||||||||||||||| |||||||||    
T  22781661 acttttcaagtcttttgcaattttaggcgagtctgaaaccttg-aaacaacttttgaagctttaagttgcatctcctgatgaactacagcttctg 22781568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 22785750 - 22785521
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| ||||| |||||||| ||||||| ||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||  ||||||||    
T  22785750 agagtagtggagatagtggttatacactttgtacaaaagtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagtcgttgctat 22785651  T
Q  101 acttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgat 200  Q
    || |||||||| ||||||||||||||||||||||| |  || | ||| | ||||  |||||||  ||| ||||||||||||||||| |||||||||||||    
T  22785650 acatttccagttttctgcaattttaggcgagtttgaaatcttg-aaatagcttttgaagctttaagttgcatctcctgatgaactgtagcttctggtgat 22785552  T
Q  201 tcacaacttctaatgaacttgcttctgatga 231  Q
    ||||| ||||| |||||||||||| ||||||    
T  22785551 tcacagcttctgatgaacttgcttttgatga 22785521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 44840439 - 44840670
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||  ||||| ||    
T  44840439 agagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagtcgttgccat 44840538  T
Q  101 acttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgat 200  Q
    |||||| ||||| |||||||| ||||||||||||| ||||| | ||||| ||||  |||||||  ||| |||||| ||||||||||||||||||| |||     
T  44840539 actttttcagtc-tctgcaatgttaggcgagtttgaatccttg-aaacagcttttgaagctttaagttgcatctcttgatgaactgcagcttctgatgaa 44840636  T
Q  201 tcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    |     ||||| |||| |||||||||||||||||||    
T  44840637 t--ttgcttctgatgatcttgcttctgatgacgtca 44840670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 3 - 236
Target Start/End: Original strand, 3277037 - 3277270
Alignment:
Q  3 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctatac 102  Q
    |||| ||||| |||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||| |||| |||| |||| |||||    
T  3277037 agtagtggagatagtggttgtacacttcgtacaaacgtactatatcaacgctctttgaagaataagcatccaatgccttccaaattagccgttgttatac 3277136  T
Q  103 ttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgatt 201  Q
    |||| |||||||||||||| || || | |||||| || ||   ||||||||||  |||||||  ||| |||||||| ||||||| |||||||| ||||||    
T  3277137 tttttcagtcttctgcaatcttcagacaagtttgaattct-ttaaacaacttttgaagctttaagttccatctcctaatgaactccagcttctagtgatt 3277235  T
Q  202 cacaacttctaatgaacttgcttctgatgacgtca 236  Q
    | || ||||| |||||||||||||| |||||||||    
T  3277236 cccagcttctgatgaacttgcttctaatgacgtca 3277270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 8 - 134
Target Start/End: Original strand, 14581527 - 14581653
Alignment:
Q  8 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctatacttttc 107  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||  ||||| ||| |||||    
T  14581527 tggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagtcgttgccatatttttc 14581626  T
Q  108 cagtcttctgcaattttaggcgagttt 134  Q
    |||||||||||||||||||||||||||    
T  14581627 cagtcttctgcaattttaggcgagttt 14581653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 33074231 - 33074470
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcct---------ttcaaaatagc 91  Q
    |||||| ||||| ||||||||||||||||||||||| |||| |||||||||| |||||||| |||||||||| |||||||         | ||||||||     
T  33074231 agagtagtggagatagtggttgtacacttcgtacaatcgtattatgtcaacgttttttgaagaataagcatctaatgccttccaatctgtccaaaatagt 33074330  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
     ||||||||||||||||||||||||||||| ||||| |||||||| |||||   ||||| ||||  ||| |||  ||| |||||||||||||||| || |    
T  33074331 cgttgctatacttttccagtcttctgcaatctttagacgagtttgaatcct-ttaaacagcttttgaagttttaagttgcatctcctgatgaactacaac 33074429  T
Q  191 ttctggtgattcacaacttctaatgaacttgcttctgatga 231  Q
    |||| ||||||| || ||||| || ||||||||||||||||    
T  33074430 ttctagtgattctcagcttctgataaacttgcttctgatga 33074470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 34322031 - 34321792
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt---------tcaaaatagc 91  Q
    |||||| || || ||||||||||||||||| ||||||||||||||||||||||| |||||| |||||| ||||||||||||         |||||||||     
T  34322031 agagtagtgaagatagtggttgtacacttcatacaaacgtactatgtcaacgctctttgaagaataagaatccaatgcctttcaatcctttcaaaatagt 34321932  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
     |||||||||||||||||| |||||||||| ||||| |||||||| |||||   ||||| ||||  | |||||  ||| |||||||||||||| | ||||    
T  34321931 cgttgctatacttttccaggcttctgcaatctttagacgagtttgaatcct-ttaaacagcttttgaggctttaagttgcatctcctgatgaattacagc 34321833  T
Q  191 ttctggtgattcacaacttctaatgaacttgcttctgatga 231  Q
    |||| ||||||| || ||||| || ||||||||||||||||    
T  34321832 ttctagtgattctcagcttctgataaacttgcttctgatga 34321792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 23392763 - 23392569
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||||||||  ||||||||||||||||||||||   |||||| ||||||||| |||||  |  ||||||||||||| |||||||||||| ||||| ||    
T  23392763 agagtaatggaagtagtggttgtacacttcgtacagttgtactaggtcaacgctctttgagaagaaagcatccaatgcatttcaaaatagccgttgccat 23392664  T
Q  101 acttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctg 195  Q
    ||||||||||||||||| ||||| |||||||||| |  |||| | ||||||||||  || ||||| |||  || | ||||||||||| ||||||||    
T  23392663 acttttccagtcttctgtaatttctaggcgagttagagtccttg-aaacaacttttgaaactttgagttcaatttactgatgaactgtagcttctg 23392569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 31328061 - 31327821
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgccttt---------caaaatagc 91  Q
    |||||| ||||| ||||||||||||||||||| | ||| |||| |||||||||| |||||| || ||||||||||||| ||          ||||||||     
T  31328061 agagtagtggaggtagtggttgtacacttcgttcgaacatactttgtcaacgctctttgaagaacaagcatccaatgctttcaaaaccctccaaaatagt 31327962  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcc-tagaaaacaactttca-aagctttgggttacatctcctgatgaactgca 188  Q
     ||||||  |||| || ||||||||||||| |||||||||||||| |||| | |||  |||||||   || ||||  ||| |||||||||||||||||||    
T  31327961 cgttgcttcacttctctagtcttctgcaatctttaggcgagtttgaatccgttgaa--caactttttgaaactttaagttgcatctcctgatgaactgca 31327864  T
Q  189 gcttctggtgattcacaacttctaatgaacttgcttctgatga 231  Q
    ||||||||||||||||| ||||| || ||||||||||||||||    
T  31327863 gcttctggtgattcacagcttctgataaacttgcttctgatga 31327821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 31334782 - 31334542
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgccttt---------caaaatagc 91  Q
    |||||| ||||| ||||||||||||||||||| | ||| |||| |||||||||| |||||| || ||||||||||||| ||          ||||||||     
T  31334782 agagtagtggaggtagtggttgtacacttcgttcgaacatactttgtcaacgctctttgaagaacaagcatccaatgctttcaaaaccctccaaaatagt 31334683  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcc-tagaaaacaactttca-aagctttgggttacatctcctgatgaactgca 188  Q
     ||||||  |||| || ||||||||||||| |||||||||||||| |||| | |||  |||||||   || ||||  ||| |||||||||||||||||||    
T  31334682 cgttgcttcacttctctagtcttctgcaatctttaggcgagtttgaatccgttgaa--caactttttgaaactttaagttgcatctcctgatgaactgca 31334585  T
Q  189 gcttctggtgattcacaacttctaatgaacttgcttctgatga 231  Q
    ||||||||||||||||| ||||| || ||||||||||||||||    
T  31334584 gcttctggtgattcacagcttctgataaacttgcttctgatga 31334542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 237
Target Start/End: Complemental strand, 20152117 - 20151884
Alignment:
Q  14 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt---------tcaaaatagctgttgctatactt 104  Q
    |||||||||||||||||||||||  ||||| |||||||||| |||||| || ||||||||||||||||         ||||| || | ||||||  ||||    
T  20152117 tagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaactaaccgttgcttcactt 20152018  T
Q  105 ttccagtcttctgcaatt-ttaggcgagtttgtatcctagaaaacaactttcaaagctttgg-gttacatctcctgatgaactgcagcttctggtgattc 202  Q
    |||||||||||||||||  |||| |||| ||  |||| |   |||||||||  |||||||   ||| ||||||||||||| ||||||||||||||||||     
T  20152017 ttccagtcttctgcaatgcttagacgagattaaatcc-attgaacaacttttgaagctttaatgttgcatctcctgatgagctgcagcttctggtgattt 20151919  T
Q  203 acaacttctaatgaacttgcttctgatgacgtcac 237  Q
     || ||||| ||||||||| |||||||||||||||    
T  20151918 tcagcttctgatgaacttgtttctgatgacgtcac 20151884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 3 - 201
Target Start/End: Complemental strand, 28701322 - 28701115
Alignment:
Q  3 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagctg 93  Q
    |||| ||||| || |||||||||||||||||||||| |||| |||||||||  |||||| || ||||||||||||         |||||||||||| |||    
T  28701322 agtagtggaggtaatggttgtacacttcgtacaaacttactttgtcaacgccctttgaagaacaagcatccaatgccttcaaatcctttcaaaatatctg 28701223  T
Q  94 ttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagctt 192  Q
    ||||| |||||||||||||||||||||| || || |||| ||| || |||  ||||| ||||  |||| ||  ||| |||| | ||||||||||||||||    
T  28701222 ttgctttacttttccagtcttctgcaatcttaagacgaggttgaat-ctattaaacagcttttgaagccttaagttgcatcccatgatgaactgcagctt 28701124  T
Q  193 ctggtgatt 201  Q
    |||||||||    
T  28701123 ctggtgatt 28701115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 28711793 - 28711547
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcct---------ttcaaaatagc 91  Q
    |||||| ||||| |||||||||||||||||||||||||||||| | |||||||| |||||| || |||||||||||||||         ||| ||||||     
T  28711793 agagtagtggaggtagtggttgtacacttcgtacaaacgtactttttcaacgctctttgaagaacaagcatccaatgccttcaaattcattcgaaatagt 28711694  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
     |||||| |||||||||||||||||||||| ||||| | || ||| |||| |  ||||| ||||  |||| ||  ||| |||| | | ||||||||||||    
T  28711693 cgttgctttacttttccagtcttctgcaatctttagacaaggttgaatcc-attaaacagcttttgaagccttaagttgcatcccattatgaactgcagc 28711595  T
Q  191 ttctggtga-ttcacaacttctaatgaacttgcttctgatgacgtcac 237  Q
    ||||||||| ||     ||||| || ||||||||||||||||||||||    
T  28711594 ttctggtgattttttggcttctgataaacttgcttctgatgacgtcac 28711547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 22802465 - 22802668
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatc---------caatgcctttcaaaatagc 91  Q
    |||||| ||||| |||||||||||||||||||||||||||||| ||||||| || |||||| ||||||||||         |||  ||||||||||||||    
T  22802465 agagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaactctctttgaagaataagcatcatatgccttcaaatcctttcaaaatagc 22802564  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
      ||||| ||| |||| ||||||||||||| ||||| |||||||| |||| |  ||| | ||||  || ||||  ||| ||||||||||||||||||||     
T  22802565 cattgctttacctttctagtcttctgcaatctttagacgagtttgaatcc-attaaatagcttttgaatctttaagttgcatctcctgatgaactgcagg 22802663  T
Q  191 ttctg 195  Q
    |||||    
T  22802664 ttctg 22802668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 231
Target Start/End: Complemental strand, 35744094 - 35743858
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagct 92  Q
    ||||| ||||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||| ||||| |||||         |||| ||||||||      
T  35744094 gagtagtggagatagtagttgtacatttcgtacaaacgtactatgtcaacgctctttgaagaattagcattcaatgccttcaaatccttccaaaatagtc 35743995  T
Q  93 gttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagct 191  Q
    ||||||||||||||||| | ||||||||| ||||| |  ||||| |  ||   ||||||||||  | |||||  ||| |||||||||||||||| |||||    
T  35743994 gttgctatacttttccaatattctgcaatctttagac--gtttg-agtctgttaaacaacttttgacgctttaagttgcatctcctgatgaactacagct 35743898  T
Q  192 tctggtgattcacaacttctaatgaacttgcttctgatga 231  Q
    ||||||||||  || ||||  || ||||||||||||||||    
T  35743897 tctggtgattttcagcttccgataaacttgcttctgatga 35743858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 31800982 - 31800741
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagc 91  Q
    |||||| ||||| |||||||||||||||||||||||| ||||| |||||||||| |||||| |  || |||||||||         |||||||||||||     
T  31800982 agagtagtggagatagtggttgtacacttcgtacaaatgtactttgtcaacgctctttgaagatcaaacatccaatgctttcaaatcctttcaaaatagt 31800883  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
    ||||| |  |||||||||||||||||||||   ||| |||||||| |||| |  || || ||||  |||||||  ||| |||| | |||||||||||||     
T  31800882 tgttgtttcacttttccagtcttctgcaataaatagacgagtttggatcc-actaagcagcttttgaagctttaagttgcatcccatgatgaactgcagt 31800784  T
Q  191 ttctggtgattcacaacttctaatgaacttgcttctgatgacg 233  Q
    |||||||||||     ||||| || ||||||||||||||||||    
T  31800783 ttctggtgattatttgcttctgataaacttgcttctgatgacg 31800741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 30557416 - 30557175
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct-ttttgaataataagcatccaatg---------cctttcaaaatag 90  Q
    |||||| ||||| |||||||||||||||||||||||||||||| |||||||||| ||||||  || ||||||||||||          ||||||||||||    
T  30557416 agagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctcttttgaggaacaagcatccaatgtgttcaaattctttcaaaatag 30557317  T
Q  91 ctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcag 189  Q
      | ||||  |||||| ||||| ||||||||  |||| |||| ||| |||| |  |||||| |||  |||| ||  ||| ||||  ||||||||||||||    
T  30557316 tcgatgcttcactttttcagtcctctgcaatccttagacgaggttgaatcccattaaacaatttttgaagccttaagttgcatcctctgatgaactgcag 30557217  T
Q  190 cttctggtgattcacaacttctaatgaacttgcttctgatga 231  Q
    |||||||||||    | ||||| |||||||||||||||||||    
T  30557216 cttctggtgatatttagcttctgatgaacttgcttctgatga 30557175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 6392638 - 6392884
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct-ttttgaataataagcatccaatg---------cctttcaaaatag 90  Q
    |||||| ||||| |||||||||  ||||||||||||||||||| |||||||||| ||||||  || ||||||||||||         |||||||||||||    
T  6392638 agagtagtggaggtagtggttgcgcacttcgtacaaacgtactttgtcaacgctcttttgaggaacaagcatccaatgcgttcaaatcctttcaaaatag 6392737  T
Q  91 ctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcag 189  Q
      ||||||  |||||||||||||||||||||  |||| |||| ||| |||  |  ||||| ||||  |||| ||  | | ||||  |||||||||||||     
T  6392738 tcgttgcttcacttttccagtcttctgcaatccttagacgaggttgaatcacattaaacagcttttgaagccttaagatgcatcctctgatgaactgcaa 6392837  T
Q  190 cttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    ||| ||||||||   | ||||| || |||||||||||||||||||||    
T  6392838 cttatggtgatttttagcttctgataaacttgcttctgatgacgtca 6392884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 6574219 - 6573972
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaac-gtactatgtcaacgctttttgaataataagcatccaatgcctt---------tcaaaatag 90  Q
    |||||| ||||| |||||||||||||||||||||||   ||||| |||||||||| |||||| || || |||||||||||||         ||||| |||    
T  6574219 agagtagtggaggtagtggttgtacacttcgtacaatttgtactttgtcaacgctctttgaagaacaaacatccaatgccttcaaatcctttcaaactag 6574120  T
Q  91 ctgttgctatacttttccagtcttctgcaatt--ttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 188  Q
      ||||||  |||||||||||||||||||||   |||| |||| ||  |||  |   |||||| ||  |||||||  ||| ||||| |||||||||||||    
T  6574119 tcgttgcttcacttttccagtcttctgcaatgcattagacgagattaaatca-attgaacaacctttgaagctttatgttgcatcttctgatgaactgca 6574021  T
Q  189 gcttctggtgattcacaacttctaatgaacttgcttctgatgacgtcac 237  Q
     ||||| ||||||  || ||||| |||||||||||||||||||||||||    
T  6574020 acttctagtgattttcagcttctgatgaacttgcttctgatgacgtcac 6573972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 200
Target Start/End: Complemental strand, 45087266 - 45087069
Alignment:
Q  14 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagctgttgctatactt 104  Q
    |||||||||||||||||||||||||||||| |||||||||| |||  | |||||||||| ||||         |||||||||||||  ||||||  ||||    
T  45087266 tagtggttgtacacttcgtacaaacgtactttgtcaacgctcttttgagaataagcatctaatgcattcaaatcctttcaaaatagtcgttgcttcactt 45087167  T
Q  105 ttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaac-tttcaaagctttgggttacatctcctgatgaactgcagcttctggtgat 200  Q
    |||||||||||||||||  |||| |||| ||| |||| |  ||||||| |||  |||||||  ||| ||||  ||||||||||| ||||||| |||||    
T  45087166 ttccagtcttctgcaatccttagacgaggttgaatcccattaaacaactttttgaagctttaagttgcatcctctgatgaactgtagcttctagtgat 45087069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 19540422 - 19540501
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| ||||| |||||||||||||||||||||||  |||||||||||||||| ||| || || ||||||||||| ||||    
T  19540422 gagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctctttaaagaacaagcatccaatacctt 19540501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 22317605 - 22317679
Alignment:
Q  8 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgccttt 82  Q
    ||||| ||||||||||| |||||||||||  ||||| |||||||||| |||||| || |||||||||||||||||    
T  22317605 tggaggtagtggttgtatacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttt 22317679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 23235013 - 23235141
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc---------ctttcaaaatagct 92  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| ||||||| || ||  || ||||||||||||||||         ||||||||||||      
T  23235013 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacactcttcaaagaataagcatccaatgccttcaaattctttcaaaatagtc 23235112  T
Q  93 gttgctatacttttccagtcttctgcaat 121  Q
    |||||| |||| |||||||||||||||||    
T  23235113 gttgctttactcttccagtcttctgcaat 23235141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 24377107 - 24377183
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 78  Q
    ||||| ||||| |||||||||||||||||||||||  |||||||||||||||| ||  || || |||||||||||||    
T  24377107 gagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgc 24377183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 13964072 - 13963993
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || || ||||||||||||||||    
T  13964072 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 13963993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 18377000 - 18376921
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || || ||||||||||||||||    
T  18377000 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 18376921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 25829140 - 25829219
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || || ||||||||||||||||    
T  25829140 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 25829219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 38781404 - 38781484
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||  |||||||||||||||||||||||  ||||| |||||||||| |||||| || || ||| |||||||||    
T  38781404 agagtagtggatgtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaatcattcaatgcctt 38781484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 20568832 - 20568765
Alignment:
Q  14 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||||||||||||||||||||  ||||| |||||||||| ||  || || ||||||||||||||||    
T  20568832 tagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 20568765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 22455084 - 22455005
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| ||||| || ||||||||||||||||||||  ||||| |||||||||||||  || |  ||||||||||||||||    
T  22455084 gagtagtggaggtactggttgtacacttcgtacaattgtactttgtcaacgcttttcaaaaagcaagcatccaatgcctt 22455005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 30666995 - 30667074
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || |  ||||||||||||||||    
T  30666995 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagatcaagcatccaatgcctt 30667074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 40782484 - 40782535
Alignment:
Q  3 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 54  Q
    |||| ||||| |||||||||||||||||||||||  ||||||||||||||||    
T  40782484 agtattggagatagtggttgtacacttcgtacaattgtactatgtcaacgct 40782535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 21537342 - 21537264
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcct 80  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || |  |||||||||||||||    
T  21537342 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaaaagcaagcatccaatgcct 21537264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 10009844 - 10009768
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 78  Q
    ||||| ||||| ||||||||||||| |||||||||  |||||||||||||| | ||  || || |||||||||||||    
T  10009844 gagtagtggagatagtggttgtacatttcgtacaattgtactatgtcaacgttcttcaaagaacaagcatccaatgc 10009768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 25037353 - 25037277
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 78  Q
    ||||| ||||| |||||||||||||||||| ||||  ||||| |||||||||||||  || || || ||||||||||    
T  25037353 gagtagtggagatagtggttgtacacttcgaacaattgtactttgtcaacgcttttcaaagaacaaacatccaatgc 25037277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 25041460 - 25041384
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 78  Q
    ||||| ||||| |||||||||||||||||| ||||  ||||| |||||||||||||  || || || ||||||||||    
T  25041460 gagtagtggagatagtggttgtacacttcgaacaattgtactttgtcaacgcttttcaaagaacaaacatccaatgc 25041384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 39037736 - 39037684
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 54  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| ||||||||||    
T  39037736 gagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgct 39037684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 22188196 - 22188117
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| ||||| |||||||||||||||||||||||   |||| ||| |||||| ||  || || ||||||||||||||||    
T  22188196 gagtagtggagatagtggttgtacacttcgtacaattatactttgttaacgctcttcaaagaacaagcatccaatgcctt 22188117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 121
Target Start/End: Original strand, 24576126 - 24576169
Alignment:
Q  78 cctttcaaaatagctgttgctatacttttccagtcttctgcaat 121  Q
    ||||||||||||| |||||||  |||||||||||||||||||||    
T  24576126 cctttcaaaatagttgttgcttcacttttccagtcttctgcaat 24576169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 236
Target Start/End: Original strand, 24377286 - 24377352
Alignment:
Q  170 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    |||||| ||||||||| ||||||||||||||    | ||||| |||||||| |||||||||||||||    
T  24377286 catctcttgatgaacttcagcttctggtgatctttagcttctgatgaactttcttctgatgacgtca 24377352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 9015462 - 9015388
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 78  Q
    ||||| ||||| ||||||||||||||  |||||||  ||||| |||||||||| ||  || ||||||||||||||||    
T  9015462 gagtagtggagatagtggttgtacac--cgtacaattgtactttgtcaacgctcttcaaagaataagcatccaatgc 9015388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 24576042 - 24576090
Alignment:
Q  3 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaac 51  Q
    |||| ||||| |||||||||||||||||||||||  ||||| |||||||    
T  24576042 agtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaac 24576090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 25189404 - 25189456
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 54  Q
    ||||| ||||| ||||||||||||| |||||||||  ||||| ||||||||||    
T  25189404 gagtagtggaggtagtggttgtacatttcgtacaattgtactttgtcaacgct 25189456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 30621222 - 30621274
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 54  Q
    ||||| ||||| |||||||| ||||||||||||||  ||||| ||||||||||    
T  30621222 gagtagtggagatagtggttttacacttcgtacaattgtactttgtcaacgct 30621274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 30623843 - 30623895
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 54  Q
    ||||| ||||| |||||||| ||||||||||||||  ||||| ||||||||||    
T  30623843 gagtagtggagatagtggttttacacttcgtacaattgtactttgtcaacgct 30623895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 164; Significance: 9e-88; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 17398780 - 17398546
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||  ||||||||    
T  17398780 agagtagtggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagtcgttgctat 17398681  T
Q  101 acttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgat 200  Q
    ||||||||||||||||||||||||||||||||||| ||||| | ||||||||||  |||||||  ||| ||||||||||||||| |||||||||||||||    
T  17398680 acttttccagtcttctgcaattttaggcgagtttgaatccttg-aaacaacttttgaagctttaagttgcatctcctgatgaaccgcagcttctggtgat 17398582  T
Q  201 tcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    ||| | ||||| ||||||||||||||||||||||||    
T  17398581 tcatagcttctgatgaacttgcttctgatgacgtca 17398546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 22190851 - 22191087
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| ||||  ||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||| |||||| ||    
T  22190851 agagtagtggaagtagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaatcagcatccaatgcatttcaaaatagttgttgccat 22190950  T
Q  101 acttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaac-tttcaaagctttgggttacatctcctgatgaactgcagcttctggtg 198  Q
    ||||||||||||||||||||||| || || |||| |  |||| | ||||| | ||| ||| ||||  ||| || ||| ||||||||||||||||||||||    
T  22190951 acttttccagtcttctgcaatttctaagcaagttagagtccttg-aaacagcttttgaaaactttaagttccacctcttgatgaactgcagcttctggtg 22191049  T
Q  199 attcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    || |||| ||||| ||||||||||||||||||||||||    
T  22191050 atacacagcttctgatgaacttgcttctgatgacgtca 22191087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 40860672 - 40860902
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| ||||  |||||||||||||| || ||||||||||||||||||||||| |||||| |||||||||||||||| ||||||| ||||  |||| ||    
T  40860672 agagtagtggaagtagtggttgtacacatcatacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcatttcaaattagccattgccat 40860771  T
Q  101 acttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtga 199  Q
    ||||||||||||||||||||||| ||||||||||    |||| | ||||||||||  || ||||  ||| ||||||||||||||||| ||||||||||||    
T  40860772 acttttccagtcttctgcaatttctaggcgagttatagtccttg-aaacaacttttgaaactttaagttccatctcctgatgaactgtagcttctggtga 40860870  T
Q  200 ttcacaacttctaatgaacttgcttctgatga 231  Q
    | |||||||||| |||||| ||||| ||||||    
T  40860871 tacacaacttctgatgaacctgcttatgatga 40860902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 6517490 - 6517734
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc---------ctttcaaaatagc 91  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||  ||||         ||| ||||||||     
T  6517490 agagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatctcatgctttccaatccttccaaaatagt 6517589  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
     ||||||||||||||||||||||||||||| ||||| |||||||| |||||  |||  ||||||  |||||||  ||| |||||||||||||||| || |    
T  6517590 cgttgctatacttttccagtcttctgcaatctttagacgagtttgaatcctttaaat-aacttttgaagctttaagttgcatctcctgatgaactacaac 6517688  T
Q  191 ttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    |||||||||||| || ||||| ||||||||||||||||||||||||    
T  6517689 ttctggtgattctcagcttctgatgaacttgcttctgatgacgtca 6517734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 10692856 - 10693100
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt---------tcaaaatagc 91  Q
    |||||| ||||| ||||||||||||||||| |||||||||||| ||| |||||| |||||| || ||||||||||||||||         |||||||||     
T  10692856 agagtagtggaggtagtggttgtacacttcatacaaacgtactttgtaaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaaatagt 10692955  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
    |||||||  ||||||||||||||||||||| ||||| |||||||| ||||    ||||||||||  |||||||  ||| |||||||||||||||| ||||    
T  10692956 tgttgcttcacttttccagtcttctgcaatctttagacgagtttgaatcc-gttaaacaacttttgaagctttaagttgcatctcctgatgaactacagc 10693054  T
Q  191 ttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    |||||||||||| || ||||| ||||||||||||||||||||||||    
T  10693055 ttctggtgattctcagcttctgatgaacttgcttctgatgacgtca 10693100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 10906622 - 10906866
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt---------tcaaaatagc 91  Q
    |||||| ||||| ||||||||||||||||| |||||||||||| ||| |||||| |||||| || ||||||||||||||||         |||||||||     
T  10906622 agagtagtggaggtagtggttgtacacttcatacaaacgtactttgtaaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaaatagt 10906721  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
    |||||||  ||||||||||||||||||||| ||||| |||||||| ||||    ||||||||||  |||||||  ||| |||||||||||||||| ||||    
T  10906722 tgttgcttcacttttccagtcttctgcaatctttagacgagtttgaatcc-gttaaacaacttttgaagctttaagttgcatctcctgatgaactacagc 10906820  T
Q  191 ttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    |||||||||||| || ||||| ||||||||||||||||||||||||    
T  10906821 ttctggtgattctcagcttctgatgaacttgcttctgatgacgtca 10906866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 39419840 - 39419606
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||| ||||| || |||| |||| ||||| |     
T  39419840 agagtaatggaagtagtggttgtacacttcgtacaaacgtactatgtcaacgc-ttttgaagaattagcatcaaatgcattccaaactagccgttgccac 39419742  T
Q  101 acttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtga 199  Q
    ||| || ||||||| || ||||| |||||||||| |  |||| | ||||| ||||  || ||||| |||  || ||||||||||||||||||||||||||    
T  39419741 actctttcagtcttttgtaatttctaggcgagttagagtccttg-aaacagcttttgaaactttgagttcaatttcctgatgaactgcagcttctggtga 39419643  T
Q  200 ttcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    | |||||||||| ||||||| ||||||||||||||||    
T  39419642 tacacaacttctgatgaactagcttctgatgacgtca 39419606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 17 - 236
Target Start/End: Complemental strand, 15475233 - 15475013
Alignment:
Q  17 tggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctatacttttccagtcttct 116  Q
    ||||||||||||||||| |||||||||||||||||||| |||||  | |||||||||||||| |||||||||||| ||||| ||||||||| | ||||||    
T  15475233 tggttgtacacttcgtataaacgtactatgtcaacgctctttgaggagtaagcatccaatgcatttcaaaatagccgttgccatacttttctactcttct 15475134  T
Q  117 gcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttctaatg 215  Q
    ||||| ||||| ||||||   ||||| | ||||| ||||  || ||||| |||  || ||||||||||||| ||||||||||||| |||| ||| | |||    
T  15475133 gcaatctttagacgagttaaaatccttg-aaacagcttttgaaactttgagttcaatttcctgatgaactgtagcttctggtgatacacagcttttgatg 15475035  T
Q  216 aac-ttgcttctgatgacgtca 236  Q
    ||| ||||||||||||||||||    
T  15475034 aactttgcttctgatgacgtca 15475013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 3105525 - 3105323
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc---------ctttcaaaatagc 91  Q
    |||||| ||||| ||||||||||||||||||||||||| ||||||||||||||| |||||| ||||| |||||||| |         |||||||||||||    
T  3105525 agagtagtggagatagtggttgtacacttcgtacaaacatactatgtcaacgctctttgaagaataaccatccaatacttttcaatcctttcaaaatagc 3105426  T
Q  92 tgttgctatacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagct 191  Q
     ||||  ||||||||||||||||||||||| |||| |||||||| ||||| | ||||| ||||  |||||||  ||| ||||||||||||||||||||||    
T  3105425 cgttggaatacttttccagtcttctgcaatcttagacgagtttgaatccttg-aaacagcttttgaagctttaagttgcatctcctgatgaactgcagct 3105327  T
Q  192 tctg 195  Q
    ||||    
T  3105326 tctg 3105323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 9751646 - 9751410
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| ||||  ||||||||||||||||||| ||||| ||||||||||||||| |||||| ||| |||||||||||| ||||||| |||| ||||| |     
T  9751646 agagtagtggaagtagtggttgtacacttcgtgcaaacatactatgtcaacgctctttgaagaattagcatccaatgcatttcaaactagccgttgccac 9751547  T
Q  101 acttttccagtcttctgcaa-ttttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtga 199  Q
    ||| ||||||||||| | || ||||||||||||| |  |||| | |||||  |||  ||   ||| | | |||||| |||||||||||||||||||||||    
T  9751546 actcttccagtcttccgtaatttttaggcgagttagagtccttg-aaacaggttttgaaaacttgagctccatctcttgatgaactgcagcttctggtga 9751448  T
Q  200 ttcacaacttctaatgaac-ttgcttctgatgacgtca 236  Q
    | || | ||||| |||||| ||||||||||||||||||    
T  9751447 tacatagcttctgatgaactttgcttctgatgacgtca 9751410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 20977462 - 20977658
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| || || |||||||||||||||||||||||||| ||||||||||||||  ||||  |||||||||||||||| |||||||||||| |||| ||     
T  20977462 agagtagtgcagatagtggttgtacacttcgtacaaacgcactatgtcaacgctccttgaggaataagcatccaatgcttttcaaaatagccgttgtta- 20977560  T
Q  101 acttttccagtcttctgcaatttt-aggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtga 199  Q
    ||||| | ||||||||||||||||  |||||| ||| ||||| | ||||||||||  |||||||  |||  |||| ||||||| ||||||||||||||||    
T  20977561 actttccaagtcttctgcaattttctggcgagcttgaatccttg-aaacaacttttgaagctttatgtt-gatcttctgatgatctgcagcttctggtga 20977658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 413007 - 413252
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt---------tcaaaatagc 91  Q
    |||||| |||||  |||||||||||||||||||||| |||||| |||||||||| |||||| || || ||| |||||||||         ||||| ||||    
T  413007 agagtagtggaggcagtggttgtacacttcgtacaatcgtactttgtcaacgctctttgaagaacaaacattcaatgccttcaaatcctttcaaattagc 413106  T
Q  92 tgttgctatacttttccagtcttctgcaatt-ttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
     ||||||  ||||||| |||||||||||||  |||| |||| ||| |||| |   |||||||||  |||||||  |||  ||||||||||||||||||||    
T  413107 cgttgcttcacttttcgagtcttctgcaatgcttagacgagattgaatcc-attgaacaacttttgaagctttaagttgaatctcctgatgaactgcagc 413205  T
Q  191 ttctggtgattcacaacttctaatgaacttgcttctgatgacgtcac 237  Q
    |||||||||||  || ||||| |||||||||||||||||||||||||    
T  413206 ttctggtgattttcagcttctgatgaacttgcttctgatgacgtcac 413252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 8 - 140
Target Start/End: Original strand, 16940028 - 16940169
Alignment:
Q  8 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagctgttgct 98  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||| |||||         |||||||||||||  ||||||    
T  16940028 tggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctccttgaagaataagcattcaatgcctttcaatcctttcaaaatagtcgttgct 16940127  T
Q  99 atacttttccagtcttctgcaattttaggcgagtttgtatcc 140  Q
    ||||||||||||||||||||||| |||| |||||||| ||||    
T  16940128 atacttttccagtcttctgcaatcttagacgagtttgaatcc 16940169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 27188744 - 27188548
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| || || |||||||| ||||||||||||||||| ||||||||||||||  ||||  |||||||||||||||| |||||||||||  |||| ||     
T  27188744 agagtagtgcagatagtggttatacacttcgtacaaacgcactatgtcaacgctccttgaggaataagcatccaatgcttttcaaaatagtcgttgtta- 27188646  T
Q  101 acttttccagtcttctgcaatttt-aggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtga 199  Q
    ||||| | ||||||||||||||||  |||||| ||| ||||| | ||||||||||  ||||||| ||||  |||| ||||||| ||||||||||||||||    
T  27188645 actttccaagtcttctgcaattttctggcgagcttgaatccttg-aaacaacttttgaagctttaggtt-gatcttctgatgatctgcagcttctggtga 27188548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 123 - 236
Target Start/End: Original strand, 14571161 - 14571273
Alignment:
Q  123 ttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgc 222  Q
    ||||||||||||| ||||| |||| |||||||  |||||||  ||| ||||||||||||||||||| |||||||||||||||| ||||| ||||||||||    
T  14571161 ttaggcgagtttgaatccttgaaa-caacttttgaagctttaagttgcatctcctgatgaactgcaacttctggtgattcacagcttctgatgaacttgc 14571259  T
Q  223 ttctgatgacgtca 236  Q
    ||||||||||||||    
T  14571260 ttctgatgacgtca 14571273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 54679935 - 54680142
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagc 91  Q
    |||||| ||||| |||||||||||||||||||||||||||||| |||||| ||| |||||| || || |||||||||         |||||||||||||     
T  54679935 agagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaatgctctttgaagaacaaacatccaatgccttcaaatcctttcaaaatagt 54680034  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
    |||||||  |||||||||||||||||||||  |||| ||||||||    | |  ||||| ||||  |||||||  ||| |||||||||||||||||||||    
T  54680035 tgttgcttcacttttccagtcttctgcaatcattagacgagtttg---accattaaacagcttttgaagctttaagttgcatctcctgatgaactgcagc 54680131  T
Q  191 ttctggtgatt 201  Q
    |||||||||||    
T  54680132 ttctggtgatt 54680142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 232
Target Start/End: Original strand, 38513896 - 38514116
Alignment:
Q  14 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctatacttttccagtct 113  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||| ||| | |||||||||| ||| ||| |||| ||||  | ||| |||||||||    
T  38513896 tagtggttgtacacttcgtacaatcgtactatgtcaacgctctttgaagaattaacatccaatgcattttaaactagccgttgtcacactcttccagtct 38513995  T
Q  114 tctgcaattt--taggcgagtttgtatcctagaaaacaac-tttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttc 210  Q
    |||  |||||  ||||||| || |  |||| | ||||| | ||| ||||| ||| ||| |||||| |||||||||||||||||| ||||| || | ||||    
T  38513996 tctttaattttataggcgaattagagtccttg-aaacagcttttgaaagc-ttgagttccatctcttgatgaactgcagcttctagtgatacatagcttc 38514093  T
Q  211 taatgaact-tgcttctgatgac 232  Q
    | |||||||  ||||||||||||    
T  38514094 tgatgaactaggcttctgatgac 38514116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 8105642 - 8105883
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct-ttttgaataataagcatccaatg---------cctttcaaaatag 90  Q
    |||||| ||||| ||||||||||||| |||||||||||||||| |||||||||| ||||||  || ||||||||||||         |||||||||||||    
T  8105642 agagtagtggaggtagtggttgtacatttcgtacaaacgtactttgtcaacgctcttttgaggaacaagcatccaatgcgttcaaatcctttcaaaatag 8105741  T
Q  91 ctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcag 189  Q
    | ||||||  | |||||||||||||||||||  |||| |||  ||| |||| |  ||||||||||  |||| ||  ||| ||||  || |||||| |||     
T  8105742 ccgttgcttcaattttccagtcttctgcaatccttagacgaagttgaatcccattaaacaacttttgaagccttaagttgcatcctctaatgaacggcaa 8105841  T
Q  190 cttctggtgattcacaacttctaatgaacttgcttctgatga 231  Q
    ||||||||||||   ||||||| || ||||||||||||||||    
T  8105842 cttctggtgatttttaacttctgataaacttgcttctgatga 8105883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 8 - 235
Target Start/End: Original strand, 19884714 - 19884951
Alignment:
Q  8 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagctgttgct 98  Q
    ||||| |||||||||||||||||||||||  ||||| |||||||||| |||||| || ||||||||||||         ||||||||| |||  ||||||    
T  19884714 tggagatagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaactagtcgttgct 19884813  T
Q  99 atacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagcttt--gggttacatctcctgatgaactgcagcttctg 195  Q
      |||||||||||||||||||||  |||| |||| ||  ||||  |  |||| | ||  |||||||  |  || |||||||||||||||| |||||||||    
T  19884814 tcacttttccagtcttctgcaatgcttagacgagattaaatccatg--aacatcctttgaagctttaagtcttgcatctcctgatgaactacagcttctg 19884911  T
Q  196 gtgattcacaacttctaatgaacttgcttctgatgacgtc 235  Q
    ||||||  || ||||| |||||||||||||||||||||||    
T  19884912 gtgattgtcagcttctgatgaacttgcttctgatgacgtc 19884951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 25651210 - 25651130
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||| |||||||||||||||| |||||||||||||| ||||||||| |||||| ||||||||| |||||||||    
T  25651210 agagtagtggaggtagtggttgtacactttgtacaaacgtactacgtcaacgctctttgaagaataagcattcaatgcctt 25651130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 37435639 - 37435561
Alignment:
Q  3 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||| ||||| |||||||||||||||||||||||  |||||||||||||||| |||||| || ||||||||||||||||    
T  37435639 agtagtggaggtagtggttgtacacttcgtacaatagtactatgtcaacgctctttgaagaacaagcatccaatgcctt 37435561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 29121375 - 29121455
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||| |||||||||||||||||||||||||||||| |||||||||| ||| || || ||||||||| ||||||    
T  29121375 agagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttaaagaacaagcatccagtgcctt 29121455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 17247426 - 17247487
Alignment:
Q  170 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatga 231  Q
    ||||||||||||||||||||||||||||||||  || ||||| |||||||||||||||||||    
T  17247426 catctcctgatgaactgcagcttctggtgattttcagcttctgatgaacttgcttctgatga 17247487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 3499745 - 3499560
Alignment:
Q  14 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctatacttttccagtct 113  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||||| ||  |||||||||||  ||||||  |||| ||||  |||||  ||||||||    
T  3499745 tagtggttgtacacttcgtacaaatgtactatgtcaacgctcattgaagaaatagcatccaatgtatttcaatctagccgttgtcatactcctccagtct 3499646  T
Q  114 tctgcaa--ttttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtga 199  Q
    |||| ||  |||| || ||| ||| ||||| | ||||| ||||  ||||| | ||||  |||| ||||||| ||||||||||||||||    
T  3499645 tctgtaatctttttggtgagcttgaatccttg-aaacagcttttgaagctctaggtt-gatcttctgatgatctgcagcttctggtga 3499560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 12601107 - 12601186
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| ||||| |||||||||||||||||||||||  |||||||||||||||| ||  || || ||||||||||||||||    
T  12601107 gagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgcctt 12601186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 37985717 - 37985638
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| ||||| |||||||||||||||||||||||  |||||||||||||||| ||  || || ||||||||||||||||    
T  37985717 gagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgcctt 37985638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 232
Target Start/End: Original strand, 55731870 - 55732023
Alignment:
Q  78 cctttcaaaatagctgttgctatacttttccagtcttctgcaatt-ttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcc 176  Q
    |||||||||||||  |||| | ||| | ||||||||| ||||||| |||| |||||||| |||| |  ||||||||||  ||| |||  ||| |||||||    
T  55731870 cctttcaaaatagtcgttgatttacctctccagtcttttgcaattgttagacgagtttgaatcc-attaaacaacttttgaagttttaagttgcatctcc 55731968  T
Q  177 tgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgac 232  Q
    ||||||||||||||||| |||||||| || |||||||  |||||| ||||||||||    
T  55731969 tgatgaactgcagcttccggtgattctcagcttctaa-aaacttgtttctgatgac 55732023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 56533168 - 56532957
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct-ttttgaataataagcatccaatg---------cctttcaaaatag 90  Q
    |||||| ||||  |||||||||||||||||||||||||||||| |||||||||| ||||||  || || |||| ||||         |||||||||||||    
T  56533168 agagtagtggaagtagtggttgtacacttcgtacaaacgtactttgtcaacgctcttttgaggaacaaacatctaatgcattcaaatcctttcaaaatag 56533069  T
Q  91 ctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcag 189  Q
    | ||||||  | |||| ||||||||||||||  |||| |||| ||| |||| | |||||| ||||  |||| ||  ||||||||  || |||||||||||    
T  56533068 ccgttgcttcattttttcagtcttctgcaatccttagacgaggttgaatcccataaaacagcttttgaagccttaagttacatcctctaatgaactgcag 56532969  T
Q  190 cttctggtgatt 201  Q
     |||||||||||    
T  56532968 tttctggtgatt 56532957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 10072942 - 10073020
Alignment:
Q  3 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||| ||||| ||||||||||||||||||||||   ||||| |||||||||| ||||||||| |||| |||||||||||    
T  10072942 agtagtggagatagtggttgtacacttcgtacatttgtactttgtcaacgctctttgaataacaagcctccaatgcctt 10073020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 3483739 - 3483855
Alignment:
Q  14 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagctgttgctatactt 104  Q
    |||||||||| | ||||||||||  ||||| |||||||||| |||||| |||||||||||||||         |||||||||||||  ||||||  ||||    
T  3483739 tagtggttgtgcgcttcgtacaattgtactttgtcaacgctctttgaagaataagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactt 3483838  T
Q  105 ttccagtcttctgcaat 121  Q
    |||||||||||||||||    
T  3483839 ttccagtcttctgcaat 3483855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 237
Target Start/End: Original strand, 3793293 - 3793373
Alignment:
Q  157 aagctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtcac 237  Q
    |||||||  ||| ||||||||||||||||||||||||| ||||||  || |||||  ||||||||||| ||||||||||||    
T  3793293 aagctttaagttgcatctcctgatgaactgcagcttctagtgattttcagcttctggtgaacttgcttttgatgacgtcac 3793373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 9140930 - 9141046
Alignment:
Q  14 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagctgttgctatactt 104  Q
    |||||||||||||||||||||||  |||||||||||||||| ||  || || ||||||||||||         |||||||||||||  |||||| |||||    
T  9140930 tagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgctttactt 9141029  T
Q  105 ttccagtcttctgcaat 121  Q
    |||||||||||| ||||    
T  9141030 ttccagtcttctacaat 9141046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 55380296 - 55380372
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 78  Q
    ||||| ||||| |||||||||||||||||||||||  |||||||||||||||| ||  || || |||||||||||||    
T  55380296 gagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgc 55380372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 22675625 - 22675546
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| ||||| |||||||||||||||| ||||||  ||||| |||||||||| |||||| || ||||||| ||||||||    
T  22675625 gagtagtggaggtagtggttgtacactttgtacaattgtactttgtcaacgctctttgaagaacaagcatcaaatgcctt 22675546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 199
Target Start/End: Complemental strand, 17700835 - 17700708
Alignment:
Q  70 atccaatgcctttcaaaatagctgttgctatacttttccagtcttctgcaatttta-ggcgagtttgtatcctagaaaacaactttcaaagctttgggtt 168  Q
    ||||||||| |||||||||||| |||| || ||||| | ||||||||||||||||  |||||| ||| ||||| |||| |||||||  ||||||| ||||    
T  17700835 atccaatgcttttcaaaatagccgttgtta-actttccaagtcttctgcaattttctggcgagcttgaatccttgaaa-caacttttgaagctttaggtt 17700738  T
Q  169 acatctcctgatgaactgcagcttctggtga 199  Q
      |||| ||||||| ||||||||||||||||    
T  17700737 g-atcttctgatgatctgcagcttctggtga 17700708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 14605013 - 14604936
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 78  Q
    |||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || || |||||||||||||    
T  14605013 agagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgc 14604936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 16853508 - 16853585
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 78  Q
    |||||| ||||| ||||||||||||||||| |||| | ||||| |||||||||| |||||  || |||||||||||||    
T  16853508 agagtagtggaggtagtggttgtacacttcatacagatgtactttgtcaacgctctttgaggaacaagcatccaatgc 16853585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 45833399 - 45833476
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 78  Q
    |||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || || |||||||||||||    
T  45833399 agagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttaaaagaaaaagcatccaatgc 45833476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 1672394 - 1672454
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaa 61  Q
    |||||| ||||| |||||||||||||||||||||||||||| | |||||||| | ||||||    
T  1672394 agagtagtggaggtagtggttgtacacttcgtacaaacgtattttgtcaacgttctttgaa 1672454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 1674869 - 1674929
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaa 61  Q
    |||||| ||||| |||||||||||||||||||||||||||| | |||||||| | ||||||    
T  1674869 agagtagtggaggtagtggttgtacacttcgtacaaacgtattttgtcaacgttctttgaa 1674929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 3395596 - 3395648
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 54  Q
    ||||| ||||| |||||||||||||||||||||||  ||||||||||||||||    
T  3395596 gagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgct 3395648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 13576207 - 13576140
Alignment:
Q  14 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||||| |||||||||||||   |||||||||||||||| |||||| || ||||||| ||||||||    
T  13576207 tagtggttttacacttcgtacagttgtactatgtcaacgctctttgaagaacaagcatctaatgcctt 13576140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 19621160 - 19621114
Alignment:
Q  8 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 54  Q
    ||||| |||||||||||||||||||||||  ||||||||||||||||    
T  19621160 tggagatagtggttgtacacttcgtacaattgtactatgtcaacgct 19621114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 6641689 - 6641742
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 54  Q
    |||||| ||||| |||||||||||||||||||||||  ||||| ||||||||||    
T  6641689 agagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgct 6641742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 16632452 - 16632525
Alignment:
Q  8 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || || ||| ||||||||||||    
T  16632452 tggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagaatccaatgcctt 16632525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 19911986 - 19911909
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct-ttttgaataataagcatccaatgc 78  Q
    ||||| ||||| |||||||||||||||| ||||||   ||||||||||||||| |||  || ||||||||||||||||    
T  19911986 gagtagtggaggtagtggttgtacactttgtacaattatactatgtcaacgctctttcaaagaataagcatccaatgc 19911909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 13576055 - 13576011
Alignment:
Q  157 aagctttgggttacatctcctgatgaactgcagcttctggtgatt 201  Q
    |||||||  ||| ||||||||||||||||||||||||||||||||    
T  13576055 aagctttatgttgcatctcctgatgaactgcagcttctggtgatt 13576011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 40846105 - 40846157
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 54  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| ||||||||||    
T  40846105 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgct 40846157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 16853673 - 16853732
Alignment:
Q  177 tgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    |||| |||| || ||| |||||||||||| ||||| || |||||||||||||||||||||    
T  16853673 tgatcaactacaacttatggtgattcacagcttctgataaacttgcttctgatgacgtca 16853732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 14904455 - 14904333
Alignment:
Q  8 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagctgttgct 98  Q
    ||||| || |||||||  |||||||||||  |||||||||||||||| ||  || |||||||||||||||         ||||||||||| |  ||||||    
T  14904455 tggagataatggttgtttacttcgtacaattgtactatgtcaacgctcttcaaagaataagcatccaatgtcttcaaatcctttcaaaatggacgttgct 14904356  T
Q  99 atacttttccagtcttctgcaat 121  Q
      |||||||||||||||||||||    
T  14904355 tcacttttccagtcttctgcaat 14904333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 3395775 - 3395836
Alignment:
Q  170 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatga 231  Q
    ||||||||||||||||  ||||||| |||||   |||||||| || ||||||||||||||||    
T  3395775 catctcctgatgaactatagcttctagtgatcttcaacttctgataaacttgcttctgatga 3395836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 12811280 - 12811204
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| ||||| |||||||||||||||||||||||   |||| |||||||||| ||   | || ||||||||||||||||    
T  12811280 gagtagtggagatagtggttgtacacttcgtacaattttactttgtcaacgctatt---agaacaagcatccaatgcctt 12811204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 19666378 - 19666427
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaac 51  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||    
T  19666378 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaac 19666427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 29680649 - 29680573
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 78  Q
    ||||| ||||| || || |||||||||||||||||  ||||| |||||||||| ||  || || |||||||||||||    
T  29680649 gagtagtggagataatgattgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgc 29680573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 140; Significance: 2e-73; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 46088999 - 46089229
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||  ||||| ||    
T  46088999 agagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagtcgttgccat 46089098  T
Q  101 acttttccagtcttctgcaa-ttttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtga 199  Q
    |||||||||||||||||||| ||||||||||||||| ||||| | ||||| ||||  |||||||  ||| |||||| |||||||||||||||||||||||    
T  46089099 acttttccagtcttctgcaatttttaggcgagtttgaatccttg-aaacagcttttgaagctttaagttgcatctcatgatgaactgcagcttctggtga 46089197  T
Q  200 ttcacaacttctaatgaacttgcttctgatga 231  Q
    | |||||||| | |||||||||||||||||||    
T  46089198 tacacaacttatgatgaacttgcttctgatga 46089229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 21135230 - 21134994
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||| ||||| |||||||||||| ||    
T  21135230 agagtagtggatttagtggttgtacacttcgtacaaacgtactatgtcaacactctttgaagaataagcatccaatgcatttcagaatagctgttgccat 21135131  T
Q  101 acttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaac-tttcaaagctttgggttacatctcctgatgaactgcagcttctggtg 198  Q
    | ||||||||||||||| ||||| |||| ||||| |  |||| | ||||||| ||| ||| ||||  ||| ||||||||||||||||||| |||||||||    
T  21135130 atttttccagtcttctgtaatttctaggtgagttagattccttg-aaacaacttttgaaaactttaagttccatctcctgatgaactgcaacttctggtg 21135032  T
Q  199 attcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    || |||||||||| ||||||||||||||||||||||||    
T  21135031 atacacaacttctgatgaacttgcttctgatgacgtca 21134994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 10250996 - 10251218
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| ||||| || ||||||||||||||||||||||||||||||||||  || |||||| ||||||||||||||||||| |||| |||| |||| |||    
T  10250996 agagtagtggagataatggttgtacacttcgtacaaacgtactatgtcaaaactctttgaagaataagcatccaatgccttccaaattagccgttgttat 10251095  T
Q  101 acttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgat 200  Q
    ||||||||||||||||||||| |||| |||||||| |||||   ||||||||||  |||||||  ||| |||||||||||||||||||||||||||||||    
T  10251096 acttttccagtcttctgcaatcttagacgagtttgaatcct-ttaaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgat 10251194  T
Q  201 tcacaacttctaatgaacttgctt 224  Q
    ||| | ||||| ||||||||||||    
T  10251195 tcatagcttctgatgaacttgctt 10251218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 21702824 - 21703062
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcc---------tttcaaaatagc 91  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||         ||||||||||||    
T  21702824 agagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcattcaatgcccttcaatcctttcaaaatagc 21702923  T
Q  92 tgttgctatacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagct 191  Q
     ||||||||||||||| ||||||||||||| |||| |||||||| ||||| |||| ||| |||  |||||||  ||| ||||||||||||||||||||||    
T  21702924 cgttgctatacttttcaagtcttctgcaatcttagacgagtttgaatccttgaaa-caaattttgaagctttaagttgcatctcctgatgaactgcagct 21703022  T
Q  192 tctggtgattcacaacttctaatgaacttgcttctgatga 231  Q
    |||||||||||||| ||||| ||| |||||||||||||||    
T  21703023 tctggtgattcacagcttctgatgtacttgcttctgatga 21703062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 21204993 - 21204765
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| ||||  ||||||||||||||||||||||||||||||||||||||||| |||||| ||| | |||||||||| |||||||||||| ||||| ||    
T  21204993 agagtagtggaagtagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaattaacatccaatgcatttcaaaatagccgttgccat 21204894  T
Q  101 acttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaac-tttcaaagctttgggttacatctcctgatgaactgcagcttctggtg 198  Q
    ||||||||||||||||||||||| |||||||||| |  |||| | ||||||| ||| ||| ||||  ||| |||||| ||||||||||||||||||||||    
T  21204893 acttttccagtcttctgcaatttctaggcgagttagagtccttg-aaacaacttttaaaaactttaagttccatctcttgatgaactgcagcttctggtg 21204795  T
Q  199 attcacaacttctaatgaacttgcttctga 228  Q
    || |||||||||| ||||||||||||||||    
T  21204794 atacacaacttctgatgaacttgcttctga 21204765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 21984606 - 21984841
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| ||||  ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||| | ||    
T  21984606 agagtagtggaagtagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcatttcaaaatagctgtttccat 21984705  T
Q  101 acttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtga 199  Q
    ||||||||||| ||||||||| | |||||||||| |  |||| | ||||||||||  |  ||||  ||| | ||||||||||||||| ||||||||||||    
T  21984706 acttttccagtgttctgcaatatctaggcgagttagagtccttg-aaacaacttttgacactttaagttccctctcctgatgaactgtagcttctggtga 21984804  T
Q  200 ttcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    | |||| ||||| ||||||||||||||||||||||||    
T  21984805 tacacagcttctgatgaacttgcttctgatgacgtca 21984841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 21121134 - 21120898
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| ||||  |||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||| ||||| |||||  ||||| ||    
T  21121134 agagtagtggaagtagtggttgtacacgtcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcatttcagaatagtcgttgccat 21121035  T
Q  101 acttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaac-tttcaaagctttgggttacatctcctgatgaactgcagcttctggtg 198  Q
    | |||||||||||||||| |||| |||| ||||| |  |||| | ||||| | ||| ||| ||||  ||| |||||||||||||||||||||||||||||    
T  21121034 atttttccagtcttctgcgatttctaggtgagttagagtccttg-aaacagcttttgaaaactttaagttccatctcctgatgaactgcagcttctggtg 21120936  T
Q  199 attcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    || |||| ||||| ||||| ||||||||||||||||||    
T  21120935 atacacagcttctgatgaatttgcttctgatgacgtca 21120898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 8 - 236
Target Start/End: Original strand, 42284645 - 42284872
Alignment:
Q  8 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctatacttttc 107  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||| ||||||||||| |  ||| | | |||||    
T  42284645 tggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaaaaagcatccaatgcatttcaaaatag-tcgtgccacaattttc 42284743  T
Q  108 cagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattcacaa 206  Q
    |||||||||||||| |||||||||||| |  |||| | ||||| ||||  ||  |||  |||  |||| ||||||||||||||||||||||||| ||||     
T  42284744 cagtcttctgcaatctttaggcgagttagagtccttg-aaacagcttttgaaaatttaagttcaatcttctgatgaactgcagcttctggtgatacacag 42284842  T
Q  207 cttctaatgaacttgcttctgatgacgtca 236  Q
    ||||| ||||||||||||||||||||||||    
T  42284843 cttctgatgaacttgcttctgatgacgtca 42284872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 37642258 - 37642494
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| ||||  |||||||||||||||||||| |||||||||||||||||||| |||||| ||| |||||||||||| ||||||| |||||||||| |     
T  37642258 agagtagtggaagtagtggttgtacacttcgtataaacgtactatgtcaacgctctttgaagaattagcatccaatgcatttcaaactagctgttgccac 37642357  T
Q  101 acttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtga 199  Q
    ||| ||||||||||||| ||||| |||||||||| |  |||| | ||||| ||||  || ||||| |||  || ||||||||||||||||||||||||||    
T  37642358 actcttccagtcttctgtaatttctaggcgagttagagtccttg-aaacagcttttgaaactttgagttcaatttcctgatgaactgcagcttctggtga 37642456  T
Q  200 ttcacaacttctaatgaac-ttgcttctgatgacgtca 236  Q
    |  | | ||||| |||||| |||||||| |||||||||    
T  37642457 tatatagcttctgatgaactttgcttctaatgacgtca 37642494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 30572207 - 30572430
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc---------ctttcaaaatagc 91  Q
    |||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| ||  || ||||| ||||||||||         |||||||||||||    
T  30572207 agagtagtggagatagtggttgtacacttcgtacaatcgtactatgtcaacgctcttctaagaataaacatccaatgcttttcaatcctttcaaaatagc 30572306  T
Q  92 tgttgctatacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagct 191  Q
     ||||||||||||||||||||||||||||| | || |||||||| ||||| |||| || || |  |||||||  |||  |||||||||||||||||| ||    
T  30572307 cgttgctatacttttccagtcttctgcaatctcagacgagtttgaatccttgaaa-cagctattgaagctttaagttgtatctcctgatgaactgcaact 30572405  T
Q  192 tctggtgattcacaacttctaatga 216  Q
    |||||||||||||||||||| ||||    
T  30572406 tctggtgattcacaacttctgatga 30572430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 48570301 - 48570063
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgccttt---------caaaatagc 91  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||         ||||||||     
T  48570301 agagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttttaatccttccaaaatagt 48570202  T
Q  92 tgttgctatacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagct 191  Q
     |||| |||||||||| ||||||||||||| |||| |||||||| ||||    ||||| ||||  || ||||  ||| |||||||||||||| | |||||    
T  48570201 cgttgttatacttttctagtcttctgcaatcttagacgagtttgaatcc-gttaaacagcttttgaaactttaagttgcatctcctgatgaattacagct 48570103  T
Q  192 tctggtgattcacaacttctaatgaacttgcttctgatga 231  Q
    ||||||||||| || ||||| || || |||||| ||||||    
T  48570102 tctggtgattctcagcttctgataaaattgcttatgatga 48570063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 44821615 - 44821371
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgccttt---------caaaatagc 91  Q
    |||||| ||||| |||| ||||||||||||||||||||||||||||||||| || |||||| ||||||||| ||| |||||          ||||||||     
T  44821615 agagtagtggagatagtagttgtacacttcgtacaaacgtactatgtcaacactctttgaagaataagcatacaaagccttcaaatccttccaaaatagt 44821516  T
Q  92 tgttgctatacttttccagtcttctgcaatt-ttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
     |||||||||||||| ||||||||| |||   |||| |||||||| |||||  ||| |||||||  |||||||  ||| |||||||||||||||| ||||    
T  44821515 cgttgctatactttttcagtcttctacaaaccttagacgagtttgaatcctttaaa-caacttttgaagctttaagttgcatctcctgatgaactacagc 44821417  T
Q  191 ttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    || ||||||||| || ||||| || |||||||||||||||||||||    
T  44821416 ttatggtgattctcagcttctgataaacttgcttctgatgacgtca 44821371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 25448636 - 25448395
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagc 91  Q
    |||||| ||||| |||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||         |||||||||||||     
T  25448636 agagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgaagaataagcatccaatgccttcaaatcctttcaaaatagt 25448537  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaact--gca 188  Q
     | ||||  ||||||||||||||||||||| ||||| |||||||| ||||    ||||| ||||  |||||||  ||| ||||| ||||||||||  |||    
T  25448536 cgctgcttcacttttccagtcttctgcaatctttagacgagtttgaatcc-gttaaacagcttttgaagctttaagttgcatcttctgatgaactgcgca 25448438  T
Q  189 gcttctggtgattcacaacttctaatgaacttgcttctgatga 231  Q
    |||||| ||||||| || ||||| || ||||||||| ||||||    
T  25448437 gcttctagtgattctcagcttctgataaacttgcttttgatga 25448395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 35040176 - 35040421
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagc 91  Q
    |||||| ||||| |||||||||||||||||||||||||||||| |||||||||| |||||| |  ||||||||||||         |||||||||||||     
T  35040176 agagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgaagatcaagcatccaatgctttcaaatcctttcaaaatagt 35040275  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
     |||||| |||||||| ||||||||||||| ||||| |||| ||| |||| |  ||||||||||  |||| ||  ||| |||| | ||||||| ||||||    
T  35040276 cgttgctttacttttctagtcttctgcaatctttagacgaggttggatcc-attaaacaacttttgaagccttaagttgcatcccatgatgaattgcagc 35040374  T
Q  191 ttctggtgattcacaacttctaatgaacttgcttctgatgacgtcac 237  Q
    |||||||||||     ||||| || ||||||||||||||||||||||    
T  35040375 ttctggtgatttttggcttctgataaacttgcttctgatgacgtcac 35040421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 2327510 - 2327270
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct-ttttgaataataagcatccaatgc---------ctttcaaaatag 90  Q
    |||||| ||||| |||||||||||||||||||||||||||||| |||||| ||| ||||||  || |||||||||||||         ||||||||||||    
T  2327510 agagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaatgctcttttgaggaacaagcatccaatgcgttcgaatcctttcaaaatag 2327411  T
Q  91 ctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcag 189  Q
     | |||||  |||||| ||||| |||||||| ||||| |||||||| ||| ||  ||||||||||  |||||||  ||| ||||||||||||||||||||    
T  2327410 tttttgcttcactttttcagtcatctgcaatctttagacgagtttgaatc-tattaaacaacttttgaagctttaagttgcatctcctgatgaactgcag 2327312  T
Q  190 cttctggtgattcacaacttctaatgaacttgcttctgatga 231  Q
    ||||||||||||     ||||| || ||||||||||||||||    
T  2327311 cttctggtgatttttggcttctgataaacttgcttctgatga 2327270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 23024798 - 23024987
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| || || |||||||||||||||||||||||||| ||||||||||||||  ||||  |||||||||||||||| |||||||||||  |||||||     
T  23024798 agagtagtgcagatagtggttgtacacttcgtacaaacgcactatgtcaacgctccttgaggaataagcatccaatgcttttcaaaatagtcgttgcta- 23024896  T
Q  101 acttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagctt 192  Q
    ||||| | |||||||||||||||  |||||| ||  ||||| | ||||| ||||  ||||||| |||| ||| | | ||||| |||||||||    
T  23024897 actttccaagtcttctgcaatttctggcgagattaaatccttg-aaacagcttttgaagctttaggttgcattttccgatgacctgcagctt 23024987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 2834700 - 2834944
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt---------tcaaaatagc 91  Q
    |||||| |||||  |||||||||||| ||||||||| |||||| |||||||| | |||||| || ||||||||||||||||         ||||| ||||    
T  2834700 agagtagtggaggcagtggttgtacaattcgtacaatcgtactttgtcaacgttctttgaagaacaagcatccaatgccttcaaatcctttcaaattagc 2834799  T
Q  92 tgttgctatacttttccagtcttctgcaatt-ttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
     ||||||  |||||| ||||||||  ||||  |||| |||| ||| |||| |   |||||||||  |||||||  ||| ||||||| |||||||||||||    
T  2834800 cgttgcttcactttttcagtcttcaacaatgcttagacgagattgaatcc-attgaacaactttggaagctttaagttgcatctcccgatgaactgcagc 2834898  T
Q  191 ttctggtgattcacaacttctaatgaacttgcttctgatgacgtcac 237  Q
    |||||||||||  || ||||||||| |||||||||||||||||||||    
T  2834899 ttctggtgattttcagcttctaatg-acttgcttctgatgacgtcac 2834944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 19215622 - 19215818
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| || || ||||||||||||||||||||||| |  ||||||||||||||  ||||  |||||||||| ||||| |||||||||||| |||| ||     
T  19215622 agagtagtgcagatagtggttgtacacttcgtacaatcacactatgtcaacgctccttgaggaataagcatcaaatgcttttcaaaatagccgttgtta- 19215720  T
Q  101 acttttccagtcttctgcaatttt-aggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtga 199  Q
    ||||| | ||||||||||||||||  |||||| ||| ||||| | ||||| ||||  ||||||| | ||  |||| ||||||| ||||||||||||||||    
T  19215721 actttccaagtcttctgcaattttctggcgagcttgaatccttg-aaacagcttttgaagctttagatt-gatcttctgatgatctgcagcttctggtga 19215818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 36134200 - 36134326
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg--------cctttcaaaatagct 92  Q
    |||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| |||||| || ||||||||||||        ||||||||||||| |    
T  36134200 agagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgcttcaaatcctttcaaaatagtt 36134299  T
Q  93 gttgctatacttttccagtcttctgca 119  Q
    ||||||  |||||||||||||||||||    
T  36134300 gttgctccacttttccagtcttctgca 36134326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 227
Target Start/End: Complemental strand, 22427425 - 22427192
Alignment:
Q  3 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagctg 93  Q
    |||| ||||| |||||||||||||||||||||||  ||||| |||||||||||||| || || ||||||||||||         ||||||||| |||  |    
T  22427425 agtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgcttttttaagaacaagcatccaatgccttcaaatcctttcaaactagtcg 22427326  T
Q  94 ttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagctt 192  Q
    |||||  |||||||||||||||||||||  |||| |||| ||  || |||   ||||   ||  |||||||  ||| ||||||||||||||||| |||||    
T  22427325 ttgcttcacttttccagtcttctgcaatgcttagacgagattaaat-ctattgaacagtctttgaagctttatgttgcatctcctgatgaactggagctt 22427227  T
Q  193 ctggtgattcacaacttctaatgaacttgcttctg 227  Q
    |||||||||  || ||||| |||||||||||||||    
T  22427226 ctggtgattttcagcttctgatgaacttgcttctg 22427192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 22600252 - 22600172
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| |||||| || ||||||||||||||||    
T  22600252 agagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgcctt 22600172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 39201062 - 39200817
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagc 91  Q
    |||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| |||||| || ||||||||||||         ||||||||| ||||    
T  39201062 agagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgtcttcaaatcctttcaaactagc 39200963  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
     ||||||  ||| || ||||||||||||||  |||   ||| ||  |||| |   |||| ||||  |||||||  ||| |||||||| ||||||||||||    
T  39200962 cgttgcttcactctttcagtcttctgcaatgcttacatgagattaaatcc-attgaacagcttttgaagctttatgttgcatctcctaatgaactgcagc 39200864  T
Q  191 ttctggtgattcacaacttctaatgaacttgcttctgatgacgtcac 237  Q
    || ||||||||  || ||| | |||||||||||| ||||||||||||    
T  39200863 ttttggtgattttcagcttttgatgaacttgcttttgatgacgtcac 39200817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 7745160 - 7744952
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagc 91  Q
    |||||| ||||| |||||||||||||||| ||| ||||||||| |||||||||| ||||||  ||||||||| ||||         ||||||||| || |    
T  7745160 agagtagtggaggtagtggttgtacactttgtataaacgtactttgtcaacgctctttgaaggataagcatcaaatgcattcaaatcctttcaaattaac 7745061  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
    ||||||||  ||| | ||||||| |||| | |||||  ||||||| |||| |  ||||||||||  || || | |||| ||||| |||||||||||||||    
T  7745060 tgttgctactcttcttcagtcttatgcactctttagatgagtttgaatcc-attaaacaacttttgaaactgtaggttgcatcttctgatgaactgcagc 7744962  T
Q  191 ttctggtgat 200  Q
    ||||||||||    
T  7744961 ttctggtgat 7744952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 22464879 - 22464643
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcc---------tttcaaaatagc 91  Q
    |||||| ||||| |||||| |||||||||||||||   ||||| |||||||||| |||||| || ||||||||||||||         ||||||| |||     
T  22464879 agagtagtggaggtagtggatgtacacttcgtacacttgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcatttcaaattagt 22464780  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcc-tagaaaacaactttcaaagctttgggttacatctcctgatgaactgcag 189  Q
     ||||||  |||||||||||||||||||||  ||||  ||| ||  |||| | ||| | | ||||  |||||||  ||||||||||||||||||||| ||    
T  22464779 cgttgcttcacttttccagtcttctgcaatgcttagatgagattaaatccgttgaaca-accttttgaagctttatgttacatctcctgatgaactgtag 22464681  T
Q  190 cttctggtgattcacaacttctaatgaacttgcttctg 227  Q
    | ||||||||||  || ||||| |||||||||||||||    
T  22464680 catctggtgattttcagcttcttatgaacttgcttctg 22464643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 32786005 - 32785927
Alignment:
Q  3 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||| || || ||||||||||||||||    
T  32786005 agtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttttaagaacaagcatccaatgcctt 32785927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 35401821 - 35401899
Alignment:
Q  3 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||| ||||| |||||||||||||||| ||||||  ||||| |||||||||| |||||| || ||||||||||||||||    
T  35401821 agtagtggaggtagtggttgtacactttgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgcctt 35401899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 1900355 - 1900436
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgccttt 82  Q
    |||||| ||||| ||||||||||||||||| |||||  ||||| |||||||||| |||||| || |||||| ||||||||||    
T  1900355 agagtagtggaggtagtggttgtacacttcttacaactgtactttgtcaacgctctttgaagaacaagcattcaatgccttt 1900436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 14263521 - 14263441
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||| ||||||||||||||||||||||||||| || || ||||||| |||||  || ||| ||||||||||||    
T  14263521 agagtagtggaggtagtggttgtacacttcgtacaaacgtgctttgccaacgctctttgaggaacaagtatccaatgcctt 14263441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 22201805 - 22201677
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagct 92  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||   | || ||||||||||||         ||||||||||||| |    
T  22201805 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcatagaacaagcatccaatgccttcaaatcctttcaaaatagtt 22201706  T
Q  93 gttgctatacttttccagtcttctgcaat 121  Q
    |||||| ||||||| ||||||||||||||    
T  22201705 gttgctttactttttcagtcttctgcaat 22201677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 28492473 - 28492394
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || || ||||||||||||||||    
T  28492473 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctattcaaagaacaagcatccaatgcctt 28492394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 236
Target Start/End: Original strand, 21544191 - 21544268
Alignment:
Q  160 ctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaac-ttgcttctgatgacgtca 236  Q
    |||| |||| ||||| ||||||||||| ||||||||||||| |||| ||||| |||||| ||||||||||||| ||||    
T  21544191 ctttaggttgcatcttctgatgaactgtagcttctggtgatacacagcttctgatgaactttgcttctgatgatgtca 21544268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 38282577 - 38282657
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgccttt 82  Q
    |||||| ||||| ||||||||||| |||||||||||  ||||| |||||||||| |||||| || |||||| ||||||||||    
T  38282577 agagtagtggagatagtggttgta-acttcgtacaattgtactttgtcaacgctctttgaagaacaagcattcaatgccttt 38282657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 2268541 - 2268621
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| | ||| |||||||||||||||||||||||  ||||| |||||||||| |||||  || |||||| |||||||||    
T  2268541 agagtagtcgaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgacgaacaagcattcaatgcctt 2268621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 7309829 - 7309908
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||| |||||||||||||||||||||||  |||||| || ||||| ||||||| ||  |||||||||||||||    
T  7309829 agagtattggaggtagtggttgtacacttcgtacaattgtactacgttaacgc-ttttgaagaacgagcatccaatgcctt 7309908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 21191935 - 21191855
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||| |||||||||||||||||||||||  ||||| || ||||||| ||  || || ||||||||||||||||    
T  21191935 agagtagtggaggtagtggttgtacacttcgtacaattgtactttgccaacgctcttcaaagaacaagcatccaatgcctt 21191855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 29215807 - 29215887
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||| ||||| |||||||||||||||||  ||||| ||| | |||| |||||| || ||||||||||||||||    
T  29215807 agagtagtggagctagtgattgtacacttcgtacaattgtactttgttatcgctctttgaagaacaagcatccaatgcctt 29215887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 33256420 - 33256341
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||  ||  || || ||||||||||||||||    
T  33256420 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgcccttcaaagaacaagcatccaatgcctt 33256341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 33276592 - 33276513
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||  ||  || || ||||||||||||||||    
T  33276592 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgcccttcaaagaacaagcatccaatgcctt 33276513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 12284440 - 12284510
Alignment:
Q  8 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 78  Q
    ||||| ||||| |||||||||||||||||  |||||||||||||||| ||  || || |||||||||||||    
T  12284440 tggagatagtgtttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgc 12284510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 231
Target Start/End: Complemental strand, 19170242 - 19170181
Alignment:
Q  170 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatga 231  Q
    ||||| ||||||||||| |||||||||||||  | | ||||| |||||||||||||||||||    
T  19170242 catcttctgatgaactgtagcttctggtgatataaagcttctgatgaacttgcttctgatga 19170181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 19717541 - 19717614
Alignment:
Q  8 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||||||| ||||||||||||||||||  ||||| |||||||||| ||  || || |||||||| |||||||    
T  19717541 tggagttagttgttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccgatgcctt 19717614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22153867 - 22153920
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 54  Q
    |||||| ||||| |||||||||||||||||||||||  ||||| ||||||||||    
T  22153867 agagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgct 22153920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 20954542 - 20954466
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 78  Q
    ||||| ||||| |||||||||||||||| ||||||  ||||| |||||||||| ||  || ||||||| ||||||||    
T  20954542 gagtagtggagatagtggttgtacacttggtacaattgtactttgtcaacgctcttcaaagaataagcctccaatgc 20954466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 234
Target Start/End: Complemental strand, 32785828 - 32785764
Alignment:
Q  170 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgt 234  Q
    |||||| ||||||||| || ||||| ||||||  || |||||||||||||||||||| |||||||    
T  32785828 catctcatgatgaactacaacttctagtgattttcagcttctaatgaacttgcttctaatgacgt 32785764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 2267101 - 2267228
Alignment:
Q  3 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc---------ctttcaaaatagctg 93  Q
    |||| ||||| ||||||||||||||||| |||||  | ||| || ||||||| |||||| || || ||||||||||         |||||||| ||| ||    
T  2267101 agtagtggaggtagtggttgtacacttcatacaattgcactttgacaacgctctttgaagaacaaacatccaatgccttcaaattctttcaaactagttg 2267200  T
Q  94 ttgctatacttttccagtcttctgcaat 121  Q
    |||||  |||||||||||||||||||||    
T  2267201 ttgcttcacttttccagtcttctgcaat 2267228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 16235365 - 16235286
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| ||||| |||| ||||||||||||||||||  ||||| ||||||| || |||| | || |||||| |||||||||    
T  16235365 gagtagtggaggtagttgttgtacacttcgtacaattgtactttgtcaacactctttggagaacaagcattcaatgcctt 16235286  T

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Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 30893104 - 30893155
Alignment:
Q  3 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 54  Q
    |||| ||||| |||||||||||||||||||||||  ||||||||||| ||||    
T  30893104 agtagtggagatagtggttgtacacttcgtacaattgtactatgtcagcgct 30893155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 236
Target Start/End: Complemental strand, 28492294 - 28492228
Alignment:
Q  170 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    |||||||||||||||| || ||||||  |||   || ||||| ||||||||||||||||||||||||    
T  28492294 catctcctgatgaactacaacttctgaagatcttcagcttctgatgaacttgcttctgatgacgtca 28492228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 17025027 - 17024954
Alignment:
Q  8 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| |||||||||||||||||||||||  ||  | | |||||||| ||| || || ||||||||||||||||    
T  17025027 tggaggtagtggttgtacacttcgtacaattgtcatttttcaacgctctttaaagaacaagcatccaatgcctt 17024954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 207 - 236
Target Start/End: Complemental strand, 25448389 - 25448360
Alignment:
Q  207 cttctaatgaacttgcttctgatgacgtca 236  Q
    ||||||||||||||||||||||||||||||    
T  25448389 cttctaatgaacttgcttctgatgacgtca 25448360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 34255586 - 34255501
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaa 86  Q
    |||||| ||||  ||||||||||||| |||||||| ||  || ||||||||||| |||||  |  ||||||||||||| |||||||    
T  34255586 agagtagtggaagtagtggttgtacagttcgtacatactcacaatgtcaacgctctttgaggataaagcatccaatgcttttcaaa 34255501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 1577878 - 1577954
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 78  Q
    ||||| ||||| |||||||||||||||| ||||||   |||| |||||||||| ||  || || |||||||||||||    
T  1577878 gagtagtggagatagtggttgtacacttagtacaattatactttgtcaacgctcttaaaagaacaagcatccaatgc 1577954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 236
Target Start/End: Complemental strand, 12613633 - 12613605
Alignment:
Q  208 ttctaatgaacttgcttctgatgacgtca 236  Q
    |||||||||||||||||||||||||||||    
T  12613633 ttctaatgaacttgcttctgatgacgtca 12613605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 23036589 - 23036521
Alignment:
Q  9 ggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg 77  Q
    |||| |||||||||||||||||||||||  || || |||  ||||| |||||| || ||||||||||||    
T  23036589 ggaggtagtggttgtacacttcgtacaattgttctttgttgacgctctttgaagaacaagcatccaatg 23036521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359 (Bit Score: 136; Significance: 4e-71; HSPs: 2)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 1855 - 1621
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||| |||||||||||| ||||| ||    
T  1855 agagtagtggagatagtggttgtacacttcgtacaaacgtaatatgtcaacgctctttgaagaataagcatccaatgcatttcaaaatagccgttgccat 1756  T
Q  101 acttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgat 200  Q
    ||||||||||||||||||||| ||||||||||||| ||||| | ||||||||||  |||||||  ||| ||||||||||||||||| ||||||||||||     
T  1755 acttttccagtcttctgcaatgttaggcgagtttgaatccttg-aaacaacttttgaagctttaagttgcatctcctgatgaactgtagcttctggtgaa 1657  T
Q  201 tcacaacttctaatgaacttgcttctgatgacgtca 236  Q
     |||| ||| |  |||||||||||||||||||||||    
T  1656 acacagcttttggtgaacttgcttctgatgacgtca 1621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 755 - 552
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagc 91  Q
    |||||| ||||| |||||||||||||||| ||||||||||||| |||||||||| |||||| || ||||||||||||         |||||||||||||     
T  755 agagtagtggaggtagtggttgtacacttagtacaaacgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaaatagt 656  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
     ||||||  ||||||||||||||||||||| ||||| |||||||| |||| |  ||||| |||   |||||||  ||| ||||||||||||||||||| |    
T  655 cgttgcttcacttttccagtcttctgcaatctttagacgagtttgaatcc-atcaaacagcttctgaagctttaagttgcatctcctgatgaactgcacc 557  T
Q  191 ttctg 195  Q
    |||||    
T  556 ttctg 552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 136; Significance: 4e-71; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 25765 - 25535
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||| ||    
T  25765 agagtagtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaagaataagcatccaatgcatttcaaaatatctgttgccat 25666  T
Q  101 acttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtga 199  Q
    |||||||||||||| |||||||| |||||||||||| ||||| | ||||||||||  || ||||  ||| ||||||||||||||||||||||||||||||    
T  25665 acttttccagtcttttgcaatttctaggcgagtttgaatccttg-aaacaacttttgaaactttaagttgcatctcctgatgaactgcagcttctggtga 25567  T
Q  200 ttcacaacttctaatgaacttgcttctgatga 231  Q
    | || | ||||| ||||| |||||||||||||    
T  25566 tacatagcttctgatgaagttgcttctgatga 25535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 34904 - 34669
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| ||||| ||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||   ||||| ||    
T  34904 agagtagtggaggtagtggttgtacacttcatacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcatttcaaaatattcgttgccat 34805  T
Q  101 acttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtga 199  Q
    ||||||||||||||||||||||| |||||||||||| ||||| | ||||||||||  || ||||  ||| |||||||||| |||||||||||||| ||||    
T  34804 acttttccagtcttctgcaatttctaggcgagtttgaatccttg-aaacaacttttgaaactttaagttgcatctcctgaagaactgcagcttctagtga 34706  T
Q  200 ttcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    | |||| ||||| ||||||||||||||||||||||||    
T  34705 tacacagcttctgatgaacttgcttctgatgacgtca 34669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 136; Significance: 4e-71; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 6407729 - 6407963
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| ||||| |||||||||||||||||||| |||||||||||||||||||| |||||| ||| ||||||||||||||| ||||||||| ||||  ||    
T  6407729 agagtagtggagatagtggttgtacacttcgtagaaacgtactatgtcaacgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaat 6407828  T
Q  101 acttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgat 200  Q
    ||||||||||||||||||||| |||| |||||||| |||||   ||||| ||||  |||||||  ||| |||||||||||||||||||||||||||||||    
T  6407829 acttttccagtcttctgcaatcttagacgagtttgaatcct-ttaaacagcttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgat 6407927  T
Q  201 tcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    ||||||||||| |||||||||||| |||||||||||    
T  6407928 tcacaacttctgatgaacttgcttttgatgacgtca 6407963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 14989599 - 14989364
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| ||||| ||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||| |||| |||| |||    
T  14989599 agagtagtggagatagtggttgtacaattcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttccaaattagccgttgttat 14989500  T
Q  101 acttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtga 199  Q
    ||||||||| ||||| ||||| || || |||||||| |||||   ||||  ||||  |||||||  ||| |||||||||||||| |||||||||||||||    
T  14989499 acttttccaatcttcagcaatcttcagacgagtttgaatcct-ttaaacggcttttgaagctttaagttgcatctcctgatgaattgcagcttctggtga 14989401  T
Q  200 ttcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  14989400 ttcacagcttctgatgaacttgcttctgatgacgtca 14989364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 13430776 - 13430540
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| ||||  |||||||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||| |||||||||||| ||||  ||    
T  13430776 agagtagtggaagtagtggttgtacacttcgtacaaacgtactatgtcaacactctttgaagaataagcatccaatgcgtttcaaaatagccgttgtcat 13430677  T
Q  101 acttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaac-tttcaaagctttgggttacatctcctgatgaactgcagcttctggtg 198  Q
    ||||||| | ||||||||||||| |||||||||| |  |||| | ||||| | ||| ||| ||||  ||| ||||||||||||||||| |||||||||||    
T  13430676 acttttctaatcttctgcaatttctaggcgagttagagtccttg-aaacagcttttgaaaactttaagttccatctcctgatgaactgtagcttctggtg 13430578  T
Q  199 attcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    || |||| ||||| ||||||||||||||||||||||||    
T  13430577 atacacagcttctgatgaacttgcttctgatgacgtca 13430540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 43639786 - 43640016
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| ||||| ||||||||||||||||||| ||||||||  ||||||||||| |||||| ||||||||| ||||||||||||||||||  ||||  ||    
T  43639786 agagtagtggagatagtggttgtacacttcgtgcaaacgtaacatgtcaacgctctttgaaaaataagcattcaatgcctttcaaaatagtcgttgtcat 43639885  T
Q  101 acttttccagtcttctgcaa-ttttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtga 199  Q
    |||||||||||||| ||||| ||||||||||||||| ||||| | ||||||||||  |||||||  ||| |||||| |||||||||||| ||||||||||    
T  43639886 acttttccagtcttttgcaatttttaggcgagtttgaatccttg-aaacaacttttgaagctttaagttgcatctcatgatgaactgcatcttctggtga 43639984  T
Q  200 ttcacaacttctaatgaacttgcttctgatga 231  Q
    | |||| ||||| ||||  |||||||||||||    
T  43639985 tacacagcttctgatgattttgcttctgatga 43640016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 21301025 - 21301260
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| ||||  |||||||||||||||| |||||||||||||||||||||||| |||||  | |||||||||||||| |||||||||||| ||||| ||    
T  21301025 agagtagtggaagtagtggttgtacactttgtacaaacgtactatgtcaacgctctttgaggagtaagcatccaatgcatttcaaaatagccgttgccat 21301124  T
Q  101 acttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtga 199  Q
    ||||||||| ||||||||||| |||||||||||| |  || | | ||||| ||||  || ||||| |||  || ||||||||||||||||||||||||||    
T  21301125 acttttccaatcttctgcaatctttaggcgagttagagtcattg-aaacagcttttgaaactttgagttcaatttcctgatgaactgcagcttctggtga 21301223  T
Q  200 ttcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    | |||| ||||| ||||||||||||||||||| ||||    
T  21301224 tacacagcttctgatgaacttgcttctgatgatgtca 21301260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 14 - 236
Target Start/End: Original strand, 21288419 - 21288641
Alignment:
Q  14 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctatacttttccagtct 113  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||  | |||||||||||| | |||||||||||| ||||| |||||||||||||||    
T  21288419 tagtggttgtacacttcgtacaaacgaactatgtcaacgctctttgaggagtaagcatccaatacatttcaaaatagccgttgccatacttttccagtct 21288518  T
Q  114 tctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttcta 212  Q
    |||||||| |||||||||||| | |  | |  |||||| |||  || ||||| |||  || ||||||||||||||||||| ||||||| |||| |||||     
T  21288519 tctgcaatctttaggcgagttag-agtcaatgaaacaaattttgaatctttgagttcaatttcctgatgaactgcagcttgtggtgatacacagcttctg 21288617  T
Q  213 atgaacttgcttctgatgacgtca 236  Q
    ||||||||||||||||||||||||    
T  21288618 atgaacttgcttctgatgacgtca 21288641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 18151794 - 18151569
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| ||||| ||||||||||||| ||||||||||||||||||||||| ||| |||||| ||||||||||||||||||| |||| |||  |||| |||    
T  18151794 agagtagtggagatagtggttgtacaattcgtacaaacgtactatgtcaatgctctttgaagaataagcatccaatgccttccaaattagtcgttgttat 18151695  T
Q  101 acttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtga 199  Q
    ||||||||||||||||||||| || || |||||||| |||           ||||  |||||||  ||| ||||| ||||||||||||| ||||||||||    
T  18151694 acttttccagtcttctgcaatcttcagacgagtttgaatc-----------cttttgaagctttaagttgcatcttctgatgaactgcaacttctggtga 18151606  T
Q  200 ttcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  18151605 ttcacagcttctgatgaacttgcttctgatgacgtca 18151569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 40845535 - 40845296
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagc 91  Q
    |||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||         |||| ||||||||     
T  40845535 agagtagtggagatagtggttgtacacttcgtacaatcgtactatgtcaacgctctttgaagaataagcatccaatgccttccaatccttccaaaatagt 40845436  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
     ||||||||||||||||||||||||||||| ||||| |||||||| |||||   ||||||||||  |||||||  | | ||||||||||||||||  |||    
T  40845435 cgttgctatacttttccagtcttctgcaatctttagacgagtttgaatcct--taaacaacttttgaagctttaagctgcatctcctgatgaactatagc 40845338  T
Q  191 ttctggtgattcacaacttctaatgaacttgcttctgatgac 232  Q
    ||||||||| ||  | ||||| || |||||||||||||||||    
T  40845337 ttctggtgagtcttagcttctgataaacttgcttctgatgac 40845296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 15336236 - 15335996
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagc 91  Q
    |||||| ||||| |||||||||||||||||||||||||||||| |||||||||| |||||  |||||||||||||||         |||||||||||||     
T  15336236 agagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgacgaataagcatccaatgccttcaaatcctttcaaaatagt 15336137  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
     ||||||  |||||  |||||||||||||| ||||| |||||||| || | |  ||||||||||  |||||||  ||| |||||||||||||||| ||||    
T  15336136 cgttgcttcactttctcagtcttctgcaatctttagacgagtttg-attccattaaacaacttttgaagctttaagttgcatctcctgatgaactacagc 15336038  T
Q  191 ttctggtgattcacaacttctaatgaacttgcttctgatgac 232  Q
    |||||||||||| || ||||| || |||||||||||||||||    
T  15336037 ttctggtgattctcagcttctgataaacttgcttctgatgac 15335996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 15425301 - 15425061
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagc 91  Q
    |||||| ||||| |||||||||||||||||||||||||||||| |||||||||| |||||  |||||||||||||||         |||||||||||||     
T  15425301 agagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgacgaataagcatccaatgccttcaaatcctttcaaaatagt 15425202  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
     ||||||  |||||  |||||||||||||| ||||| |||||||| || | |  ||||||||||  |||||||  ||| |||||||||||||||| ||||    
T  15425201 cgttgcttcactttctcagtcttctgcaatctttagacgagtttg-attccattaaacaacttttgaagctttaagttgcatctcctgatgaactacagc 15425103  T
Q  191 ttctggtgattcacaacttctaatgaacttgcttctgatgac 232  Q
    |||||||||||| || ||||| || |||||||||||||||||    
T  15425102 ttctggtgattctcagcttctgataaacttgcttctgatgac 15425061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 15516605 - 15516365
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagc 91  Q
    |||||| ||||| |||||||||||||||||||||||||||||| |||||||||| |||||  |||||||||||||||         |||||||||||||     
T  15516605 agagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgacgaataagcatccaatgccttcaaatcctttcaaaatagt 15516506  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
     ||||||  |||||  |||||||||||||| ||||| |||||||| || | |  ||||||||||  |||||||  ||| |||||||||||||||| ||||    
T  15516505 cgttgcttcactttctcagtcttctgcaatctttagacgagtttg-attccattaaacaacttttgaagctttaagttgcatctcctgatgaactacagc 15516407  T
Q  191 ttctggtgattcacaacttctaatgaacttgcttctgatgac 232  Q
    |||||||||||| || ||||| || |||||||||||||||||    
T  15516406 ttctggtgattctcagcttctgataaacttgcttctgatgac 15516365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 14 - 200
Target Start/End: Complemental strand, 33560359 - 33560173
Alignment:
Q  14 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctatacttttccagtct 113  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||| ||| |||||||||||| ||||||| |||| ||||| | ||| |||||||||    
T  33560359 tagtggttgtacacttcgtacaaacgtattatgtcaacgctctttgaagaattagcatccaatgcatttcaaactagccgttgccacactcttccagtct 33560260  T
Q  114 tctgcaattt-taggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgat 200  Q
    |||| ||||| |||||||||| |  |||| | ||||||||||  ||   ||| ||| |||||| ||||||||||||||||||||||||    
T  33560259 tctgtaatttctaggcgagttagagtccttg-aaacaacttttgaaaacttgagttccatctcttgatgaactgcagcttctggtgat 33560173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 231
Target Start/End: Original strand, 22673783 - 22674020
Alignment:
Q  3 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagctg 93  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||         |||| |||||||| ||    
T  22673783 agtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgtcttctaatccttccaaaatagatg 22673882  T
Q  94 ttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagctt 192  Q
    |||||||||||||| ||||||||||||| |  || |||||||| ||||    ||||||||||  |||||||  ||| ||||||| |||||||| || |||    
T  22673883 ttgctatacttttctagtcttctgcaatctccagacgagtttgaatcc-gttaaacaacttttgaagctttaagttgcatctccggatgaactacaactt 22673981  T
Q  193 ctggtgattcacaacttctaatgaacttgcttctgatga 231  Q
    ||||||||   || ||||| || ||||||||||||||||    
T  22673982 ctggtgatcttcagcttctgataaacttgcttctgatga 22674020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 1745162 - 1745398
Alignment:
Q  1 agagtaatggagttagtggttgtacactt-cgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgcta 99  Q
    |||||| ||||  |||| ||||||||||| |||||| |||||||||||||||||  ||||||  || |||||||||||| ||||||| |||| ||||| |    
T  1745162 agagtagtggaagtagttgttgtacactttcgtacagacgtactatgtcaacgcactttgaagtattagcatccaatgcatttcaaactagccgttgcca 1745261  T
Q  100 tacttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtg 198  Q
     ||| ||| ||||||||| ||||| |||||||||  |  |||| |||| |||||||  ||   ||| ||| |||||| ||||||||||||||||||||||    
T  1745262 cactcttctagtcttctgtaatttctaggcgagtaagagtccttgaaa-caacttttgaaaacttgagttccatctcttgatgaactgcagcttctggtg 1745360  T
Q  199 attcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    || |||| ||||| ||||||||||||||||||||||||    
T  1745361 atacacagcttctgatgaacttgcttctgatgacgtca 1745398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 8 - 231
Target Start/End: Original strand, 36105205 - 36105437
Alignment:
Q  8 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagctgttgct 98  Q
    ||||| |||||||||||||||| ||||||||||||||| |||||||| |||||| ||||| |||||||||         |||| ||||||||| |||| |    
T  36105205 tggaggtagtggttgtacactttgtacaaacgtactatatcaacgctctttgaagaataaacatccaatgccttcaaatccttccaaaatagccgttgtt 36105304  T
Q  99 atacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggt 197  Q
    ||||||||||| ||||||||||| ||||| |||||||| ||||    ||||| ||||  |||||||  ||| ||||||||||||||||  ||||||||||    
T  36105305 atacttttccaatcttctgcaatctttagacgagtttgaatcc-gttaaacagcttttgaagctttaagttgcatctcctgatgaactatagcttctggt 36105403  T
Q  198 gattcacaacttctaatgaacttgcttctgatga 231  Q
    ||||  || ||||| || ||||||||||||||||    
T  36105404 gattttcagcttctgataaacttgcttctgatga 36105437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 22663119 - 22663358
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagc 91  Q
    |||||| ||||| || |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||         | || ||||||||     
T  22663119 agagtagtggagatattggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgtcttctaatctttccaaaatagt 22663218  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
    |||||||||| ||||||||||||||||||| || || |||||||| ||||    ||||| ||||  |||||||  ||| |||||||| ||||||| || |    
T  22663219 tgttgctatatttttccagtcttctgcaatcttcagacgagtttgaatcc-gttaaacagcttttgaagctttaagttgcatctcctaatgaactacaac 22663317  T
Q  191 ttctggtgattcacaacttctaatgaacttgcttctgatga 231  Q
    |||| |||||   || |||||||| ||||||||||||||||    
T  22663318 ttctagtgatcttcagcttctaataaacttgcttctgatga 22663358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 8 - 237
Target Start/End: Complemental strand, 23185367 - 23185129
Alignment:
Q  8 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagctgttgct 98  Q
    ||||| |||||||||||||||||||||||  ||||| |||||||||| |||||| |||||||||||||||         ||||||||| |||  ||||||    
T  23185367 tggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaataagcatccaatgccttcaaatcctttcaaactagtcgttgct 23185268  T
Q  99 atacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggt 197  Q
      |||||||||||||||||||||  |||| |||| ||  |||| |   |||||| ||  |||||||  ||| ||||||||||||||||||||||||||||    
T  23185267 tcacttttccagtcttctgcaatgcttagacgagattaaatcc-attgaacaacctttgaagctttatgttgcatctcctgatgaactgcagcttctggt 23185169  T
Q  198 gattcacaacttctaatgaacttgcttctgatgacgtcac 237  Q
    ||||  || ||||| |||||||||||||||||||| ||||    
T  23185168 gattttcagcttctgatgaacttgcttctgatgacatcac 23185129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 9320571 - 9320812
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct-ttttgaataataagcatccaatg---------cctttcaaaatag 90  Q
    |||||| ||||| ||||||||||||||||||||||||  |||| |||||||||| ||||||| |||||||||||||||         ||||||||||||     
T  9320571 agagtagtggaggtagtggttgtacacttcgtacaaatatactttgtcaacgctcttttgaagaataagcatccaatgcgttcaaatcctttcaaaataa 9320670  T
Q  91 ctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcag 189  Q
     |||||||  ||||||||||||||||||||| ||||| |||| ||| |||| |  ||||| ||||  |||| ||  ||| ||||  ||||||||||||||    
T  9320671 ttgttgcttcacttttccagtcttctgcaatctttagacgaggttgaatccaattaaacagcttttgaagccttaagttgcatcctctgatgaactgcag 9320770  T
Q  190 cttctggtgattcacaacttctaatgaacttgcttctgatga 231  Q
    ||||||||||||   | ||||| || ||||||||||||||||    
T  9320771 cttctggtgatttttagcttctgataaacttgcttctgatga 9320812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 201
Target Start/End: Original strand, 24551279 - 24551486
Alignment:
Q  3 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcc---------tttcaaaatagctg 93  Q
    |||| ||||| |||||||||||||||||||||||||||||||||| |||||| |||||| || ||||||||||||||         |||||||||||  |    
T  24551279 agtagtggaggtagtggttgtacacttcgtacaaacgtactatgttaacgctctttgaagaacaagcatccaatgccttcaaatcttttcaaaatagtcg 24551378  T
Q  94 ttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagctt 192  Q
    |||||  ||||||||||||||||||||| ||||| |||| ||| |||| |  ||||||||||  |||| ||  ||| |||| | ||||||||||||||||    
T  24551379 ttgcttcacttttccagtcttctgcaatctttagacgaggttgaatcc-attaaacaacttttgaagccttaagttgcatcccatgatgaactgcagctt 24551477  T
Q  193 ctggtgatt 201  Q
    |||||||||    
T  24551478 ctggtgatt 24551486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 45538587 - 45538378
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagc 91  Q
    |||||| ||||| |||||||||||||||||||||||||||  | |||||||||| |||||| || ||||||||||||         |||||||||||||     
T  45538587 agagtagtggaggtagtggttgtacacttcgtacaaacgtgatttgtcaacgctctttgaagaacaagcatccaatgtcttcaaatcctttcaaaatagt 45538488  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
    |||||||  ||||||||||||||||||||| ||||| |||| ||| |||| |  ||||||||||  |||| ||  ||| |||| | ||||||||||||||    
T  45538487 tgttgcttcacttttccagtcttctgcaatctttagacgaggttgaatcc-attaaacaacttttgaagccttaagttgcatcccatgatgaactgcagc 45538389  T
Q  191 ttctggtgatt 201  Q
    |||||||||||    
T  45538388 ttctggtgatt 45538378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 17797425 - 17797664
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagc 91  Q
    |||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| |||||| || ||||||||||||         ||||||||| ||||    
T  17797425 agagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaattcctttcaaactagc 17797524  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
     |||||   ||||||||||||||||| |||  |||| |||| ||| |||| |   |||||||||  | |||||  ||| ||||||||||||| |||||||    
T  17797525 cgttgcatcacttttccagtcttctgtaatggttagacgagattgaatcc-attgaacaacttttgaggctttaagttgcatctcctgatgagctgcagc 17797623  T
Q  191 ttctggtgattcacaacttctaatgaacttgcttctgatga 231  Q
    |||||||||||  || ||||| |||||||||||||||||||    
T  17797624 ttctggtgattttcagcttctgatgaacttgcttctgatga 17797664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 24833205 - 24832960
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct-ttttgaataataagcatccaatg---------cctttcaaaatag 90  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||  || ||||||||||||         || |||||| |||    
T  24833205 agagtaatggaggtagtggttgtacacttcgtacaaacgtaccatgtcaacgctcttttgaggaacaagcatccaatgcgttcaaatcccttcaaagtag 24833106  T
Q  91 ctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcag 189  Q
    |  |||||  |||||| ||||||||||||||  |||| |||| ||| |||| |  ||||| ||||  |||| ||  ||| ||||  ||||||||||||||    
T  24833105 ccattgcttcactttt-cagtcttctgcaatccttagacgaggttgaatcccattaaacagcttttgaagccttaagttgcatcctctgatgaactgcag 24833007  T
Q  190 cttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    ||||||||||||   | |||||||| |||||||||||||||||||||    
T  24833006 cttctggtgatttttagcttctaataaacttgcttctgatgacgtca 24832960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 16207309 - 16207438
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagc 91  Q
    |||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| |||||| || ||||||||||||         |||||||||||||     
T  16207309 agagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaaatagt 16207408  T
Q  92 tgttgctatacttttccagtcttctgcaat 121  Q
     |||||| |||| |||||||||||||||||    
T  16207409 agttgctttactcttccagtcttctgcaat 16207438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 16188988 - 16189067
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| || ||| |||||||||||||||||||    
T  16188988 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttagaagaataagcatccaatgcctt 16189067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 145 - 232
Target Start/End: Complemental strand, 3598341 - 3598254
Alignment:
Q  145 aaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgac 232  Q
    ||||||||||  |||||||  ||| |||||||||||||||| || ||||||||||||| || ||||| |||||||||||| |||||||    
T  3598341 aaacaacttttgaagctttaagttgcatctcctgatgaactacaacttctggtgattctcagcttctgatgaacttgcttatgatgac 3598254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 23263753 - 23263680
Alignment:
Q  8 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| |||||||||||||||||||||||  ||||| |||||||||| |||||| || || |||||||||||||    
T  23263753 tggaggtagtggttgtacacttcgtacaactgtactttgtcaacgctctttgaagaacaaacatccaatgcctt 23263680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 1237640 - 1237720
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||| |||||||||||||||||| ||||| ||||| |||||||||| |||||| || ||  ||||||||||||    
T  1237640 agagtagtggaggtagtggttgtacacttcgcacaaaagtactttgtcaacgctctttgaagaacaaatatccaatgcctt 1237720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 21932887 - 21932967
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgccttt 82  Q
    ||||| ||||| |||||||||||||||||||||||   |||| |||||||||| |||||| || |||||| ||||||||||    
T  21932887 gagtagtggaggtagtggttgtacacttcgtacaattttactttgtcaacgctctttgaaaaacaagcatacaatgccttt 21932967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 12757910 - 12757831
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || || ||||||||||||||||    
T  12757910 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 12757831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 17441954 - 17441827
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg--------cctttcaaaatagctg 93  Q
    ||||| ||||| |||||||||||||||| ||||||  ||||| |||||||||| ||  || |||||||||||||||        |||||||||||||  |    
T  17441954 gagtagtggagatagtggttgtacacttagtacaattgtactttgtcaacgctcttcaaagaataagcatccaatgcttcaaatcctttcaaaatagtcg 17441855  T
Q  94 ttgctatacttttccagtcttctgcaat 121  Q
    ||||| || | |||||||||||||||||    
T  17441854 ttgctttagtcttccagtcttctgcaat 17441827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 19943238 - 19943368
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaa-taataagcatccaatg---------cctttcaaaatag 90  Q
    |||||| ||||| |||||||||||||||||||||||   |||| |||||||||||||| ||  || ||||||||||||         |||||||||||||    
T  19943238 agagtagtggaggtagtggttgtacacttcgtacaattttactttgtcaacgctttttaaaggaacaagcatccaatgccttcaaatcctttcaaaatag 19943337  T
Q  91 ctgttgctatacttttccagtcttctgcaat 121  Q
     |||||||  ||| |||||||||||||||||    
T  19943338 ttgttgcttcactcttccagtcttctgcaat 19943368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 24646342 - 24646420
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcct 80  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| ||||||| || ||  || ||||||||||||||||||    
T  24646342 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacactcttcaaagaataagcatccaatgcct 24646420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 231
Target Start/End: Original strand, 43774053 - 43774110
Alignment:
Q  174 tcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatga 231  Q
    |||||||||||| |||||||||||||| || | ||||| |||||||||||||||||||    
T  43774053 tcctgatgaactacagcttctggtgatacatagcttctgatgaacttgcttctgatga 43774110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 602867 - 602791
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 78  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || || |||||||||||||    
T  602867 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgc 602791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 18679831 - 18679895
Alignment:
Q  14 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 78  Q
    |||||||||||||||||||||||  |||||||||||||||| ||  || || |||||||||||||    
T  18679831 tagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgc 18679895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 18719005 - 18719081
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 78  Q
    ||||| ||||| |||||||||||||||||||||||  |||||||| ||||||| ||  || || |||||||||||||    
T  18719005 gagtagtggagatagtggttgtacacttcgtacaattgtactatgacaacgctcttcaaagaacaagcatccaatgc 18719081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 39693539 - 39693615
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 78  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || || |||||||||||||    
T  39693539 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgc 39693615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 45568049 - 45567969
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| || || ||||||| |||||||||||||| | ||||| |||||||||| ||||||  |||| |||||||||||||    
T  45568049 agagtagtgaaggtagtggtcgtacacttcgtacagaagtactttgtcaacgctctttgaaggataatcatccaatgcctt 45567969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 16681438 - 16681371
Alignment:
Q  14 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||||||||||||||||||||  |||||||||||||||| ||  || || ||||||| ||||||||    
T  16681438 tagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatctaatgcctt 16681371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 19156200 - 19156279
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| ||||| ||||||||||||| |||||||||  ||||| |||||||||| ||  || || ||||||||||||||||    
T  19156200 gagtagtggagatagtggttgtacatttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 19156279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 33082873 - 33082940
Alignment:
Q  14 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||||||||||||||||||||  ||||| |||||||||| ||  || || ||||||||||||||||    
T  33082873 tagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 33082940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 20382535 - 20382489
Alignment:
Q  8 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 54  Q
    ||||| |||||||||||||||||||||||  ||||||||||||||||    
T  20382535 tggagatagtggttgtacacttcgtacaattgtactatgtcaacgct 20382489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 45292842 - 45292876
Alignment:
Q  14 tagtggttgtacacttcgtacaaacgtactatgtc 48  Q
    |||||||||||||||||||||||||||||||||||    
T  45292842 tagtggttgtacacttcgtacaaacgtactatgtc 45292876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 18685545 - 18685465
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||| |||||||||||||||||||||||  ||| | | |||||||| ||  || |||||||||| ||||||||    
T  18685545 agagtagtggagatagtggttgtacacttcgtacaattgtagtttttcaacgctcttcaaaaaataagcatctaatgcctt 18685465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 18722794 - 18722714
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||| |||||||||||||||||||||||  ||| | | |||||||| ||  || |||||||||| ||||||||    
T  18722794 agagtagtggagatagtggttgtacacttcgtacaattgtagtttttcaacgctcttcaaaaaataagcatctaatgcctt 18722714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 18731139 - 18731059
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||| |||||||||||||||||||||||  ||| | | |||||||| ||  || |||||||||| ||||||||    
T  18731139 agagtagtggagatagtggttgtacacttcgtacaattgtagtttttcaacgctcttcaaaaaataagcatctaatgcctt 18731059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 236
Target Start/End: Complemental strand, 23271105 - 23271038
Alignment:
Q  171 atctcctgatgaactgcagcttctggtgattcacaacttctaatgaac--ttgcttctgatgacgtca 236  Q
    |||| ||||| ||||| |||||||||||||||| | ||||| ||||||  ||||||||||||||||||    
T  23271105 atcttctgatcaactgtagcttctggtgattcatagcttctgatgaacttttgcttctgatgacgtca 23271038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 17914463 - 17914542
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| ||||| |||||||| ||||||||||||||  ||||| |||||||||| ||  || || ||||||| ||||||||    
T  17914463 gagtagtggagatagtggttatacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatctaatgcctt 17914542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 229
Target Start/End: Original strand, 21933066 - 21933125
Alignment:
Q  170 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgat 229  Q
    |||||||||||||| |  ||||||||||||||  || ||||| |||||||||||||||||    
T  21933066 catctcctgatgaaatagagcttctggtgattttcagcttctgatgaacttgcttctgat 21933125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 30421577 - 30421496
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttg--aataataagcatccaatgcctt 81  Q
    |||||| ||||| ||||||||||| ||||||||| || ||||| |||||||||| ||||  || || ||||||||||||||||    
T  30421577 agagtagtggaggtagtggttgtaaacttcgtac-aatgtactttgtcaacgctctttgaaaagaacaagcatccaatgcctt 30421496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 43644900 - 43644979
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| | | |||||| ||  || || ||||||||||||||||    
T  43644900 gagtagtggaggtagtggttgtacacttcgtacaattgtactttattaacgctcttcaaagaacaagcatccaatgcctt 43644979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 236
Target Start/End: Complemental strand, 12757731 - 12757665
Alignment:
Q  170 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    ||||||||||||||||  |||| ||||||||   || ||||| || |||||||||||||||||||||    
T  12757731 catctcctgatgaactagagctactggtgatcttcagcttctgatcaacttgcttctgatgacgtca 12757665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 236
Target Start/End: Original strand, 19156379 - 19156445
Alignment:
Q  170 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    |||||| ||||||||| || |||||||||||   || ||||| ||||||||||||||||||| ||||    
T  19156379 catctcttgatgaactacaacttctggtgatcttcagcttctgatgaacttgcttctgatgatgtca 19156445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 18321306 - 18321229
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcc 79  Q
    ||||| ||||| || ||||||||||||||||||||  ||||| |||||||||  ||  || || ||||||||||||||    
T  18321306 gagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgcccttcaaagaacaagcatccaatgcc 18321229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 25164074 - 25164123
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaac 51  Q
    ||||| ||||| |||||||||||||||||||||||  |||||||| ||||    
T  25164074 gagtagtggagatagtggttgtacacttcgtacaattgtactatgacaac 25164123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 17267478 - 17267526
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaa 50  Q
    ||||| ||||| ||||||||||||| |||||||||  ||||||||||||    
T  17267478 gagtagtggagatagtggttgtacaattcgtacaattgtactatgtcaa 17267526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 17525864 - 17525800
Alignment:
Q  14 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 78  Q
    |||||||||||||||| ||||||  ||||| |||||||||| ||  || || |||||||||||||    
T  17525864 tagtggttgtacactttgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgc 17525800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 18121236 - 18121176
Alignment:
Q  22 gtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgccttt 82  Q
    |||||||||||||||  ||||| ||| || ||| |||||| || |||||||||||||||||    
T  18121236 gtacacttcgtacaattgtactttgttaatgctctttgaagaacaagcatccaatgccttt 18121176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 30421411 - 30421367
Alignment:
Q  157 aagctttgggttacatctcctgatgaactgcagcttctggtgatt 201  Q
    |||||||  ||| ||||| ||||||||||||||||||||||||||    
T  30421411 aagctttatgttgcatcttctgatgaactgcagcttctggtgatt 30421367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 136; Significance: 4e-71; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 28464469 - 28464235
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| | ||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||| |||    
T  28464469 agagtagtagagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagccgttgttat 28464370  T
Q  101 acttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgat 200  Q
    ||||||  ||||||||||||| |||| |||||||| ||||| | ||||| ||||  |||||||  |||  ||||||||||||||||||||||||||||||    
T  28464369 acttttttagtcttctgcaatcttagacgagtttgaatccttg-aaacagcttttgaagctttaagttgtatctcctgatgaactgcagcttctggtgat 28464271  T
Q  201 tcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    ||||| ||||| || |||||||||||||||||||||    
T  28464270 tcacagcttctgataaacttgcttctgatgacgtca 28464235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 3245571 - 3245328
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaa---------aatagc 91  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||         ||||||    
T  3245571 agagtactggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatcaaatgcctttcaattctttcaaaatagc 3245472  T
Q  92 tgttgctatacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagct 191  Q
     ||||||||||||||||||||||||||||| |||| |||||||| ||||| |||| ||  |||  |||||||  ||| ||||||||||||||||||||||    
T  3245471 cgttgctatacttttccagtcttctgcaatcttagacgagtttgaatccttgaaa-cagttttggaagctttaagttgcatctcctgatgaactgcagct 3245373  T
Q  192 tctggtgattcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    |||||||||||||| ||||| |||||||||||||| |||||||||    
T  3245372 tctggtgattcacagcttctgatgaacttgcttctaatgacgtca 3245328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 10848780 - 10849015
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| ||||| |||||||||||||||| ||||||||||| |||||||||||| |||||| |||||||||| |||||||||||||||||||| ||| ||    
T  10848780 agagtagtggagatagtggttgtacactttgtacaaacgtattatgtcaacgctctttgaagaataagcatctaatgcctttcaaaatagctgatgccat 10848879  T
Q  101 acttttccagtcttctgcaa-ttttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtga 199  Q
    ||||||||||| |||||||| ||||||||||||||| ||||| | ||||||||||  |||||||  ||| |||||| |||||||||||||||||||||||    
T  10848880 acttttccagttttctgcaatttttaggcgagtttgaatccttg-aaacaacttttgaagctttaagttgcatctcatgatgaactgcagcttctggtga 10848978  T
Q  200 ttcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    | |||| ||| | |||||||||||| |||||| ||||    
T  10848979 tacacagcttatgatgaacttgcttttgatgatgtca 10849015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 35932136 - 35931900
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| ||||  |||||||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||| |||||||||||  ||||| ||    
T  35932136 agagtagtggaagtagtggttgtacacttcgtacaaacgtactatgtcaacactctttgaagaataagcatccaatgcgtttcaaaatagtcgttgccat 35932037  T
Q  101 acttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaac-tttcaaagctttgggttacatctcctgatgaactgcagcttctggtg 198  Q
    ||||||||||||||||||||||| |||||||||| |  |||| | ||||||| ||| ||| ||||  ||| || ||| |||||||||| | |||||||||    
T  35932036 acttttccagtcttctgcaatttctaggcgagttagagtccttg-aaacaacttttgaaaactttaagttccacctcttgatgaactgtaccttctggtg 35931938  T
Q  199 attcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    || |||||||||| ||||||| ||||||||||||||||    
T  35931937 atacacaacttctgatgaactagcttctgatgacgtca 35931900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 25930286 - 25930076
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| | ||| ||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||  ||| |||| |||| |||    
T  25930286 agagtagtagagatagtggttgtacaattcgtacaaacgtactatgtcaacgctctttgaaaaataagcatccaatgccttctaaattagccgttgttat 25930187  T
Q  101 acttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtga 199  Q
    |||||||||||||| |||||| ||||| |||||||| |||||   ||||||||||  |||||||  ||| |||||||||||||| |||||||||||||||    
T  25930186 acttttccagtcttatgcaatctttagacgagtttgaatcct-ttaaacaacttttgaagctttaagttgcatctcctgatgaattgcagcttctggtga 25930088  T
Q  200 ttcacaacttct 211  Q
    |||||| |||||    
T  25930087 ttcacagcttct 25930076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 35986362 - 35986132
Alignment:
Q  1 agagtaatggagttagtggttgtacacttc-gtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgcta 99  Q
    |||||| ||||  ||||||||||||||||  ||||| |||||||||||||||||| |||||| |||| ||||||||||| |||||||||||  ||||| |    
T  35986362 agagtagtggaagtagtggttgtacacttttgtacagacgtactatgtcaacgctctttgaagaataggcatccaatgcatttcaaaatagtcgttgcca 35986263  T
Q  100 tacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtga 199  Q
     ||||||||||||||||||||||||||||||||| |  |||| | ||||| ||||  || ||||  |||  |||||||||||||||||| ||||||||||    
T  35986262 cacttttccagtcttctgcaattttaggcgagttagagtccttg-aaacatcttttgaaactttaagttcaatctcctgatgaactgcaacttctggtga 35986164  T
Q  200 ttcacaacttctaatgaacttgcttctgatga 231  Q
    |||||| ||||| |||||||||||||||||||    
T  35986163 ttcacagcttctgatgaacttgcttctgatga 35986132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 9088976 - 9089190
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||| ||||||||  ||||  ||    
T  9088976 agagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaattagcatccaatgccttccaaaatagtcgttgtaat 9089075  T
Q  101 acttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgat 200  Q
    |||||||||||||||| ||||  ||| ||||||||  ||||   ||||| ||||  || ||||  ||| |||||||||||||||||||||||||||||||    
T  9089076 acttttccagtcttcttcaatcatagacgagtttgattcct-ttaaacagcttttgaaactttaagttgcatctcctgatgaactgcagcttctggtgat 9089174  T
Q  201 tcacaacttctaatga 216  Q
    ||||| ||||| ||||    
T  9089175 tcacagcttctgatga 9089190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 15516976 - 15517220
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgccttt---------caaaatagc 91  Q
    |||||| ||||| |||||||||||||||||||||||| |||||||| |||| || |||||| |||||||||||||||||||          |||||||||    
T  15516976 agagtagtggaggtagtggttgtacacttcgtacaaaagtactatgccaacactctttgaagaataagcatccaatgccttcaaatccttccaaaatagc 15517075  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcc-tagaaaacaactttcaaagctttgggttacatctcctgatgaactgcag 189  Q
     ||||||||||||||||||||||||||||| ||||| |||||||| |||| | |  |||||||||  |||||||  ||| ||||| |||||||||| ||     
T  15517076 cgttgctatacttttccagtcttctgcaatctttagacgagtttgaatccgttg--aacaacttttgaagctttaagttgcatcttctgatgaactacaa 15517173  T
Q  190 cttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    ||||||||||||| |||||||| || |||||||||||||||| ||||    
T  15517174 cttctggtgattctcaacttctgataaacttgcttctgatgatgtca 15517220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 4887029 - 4887273
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt---------tcaaaatagc 91  Q
    |||||| ||||| |||||||||||||||||||||| ||||||| |||||||||| |||||| || ||||||||||||||||         |||||||||     
T  4887029 agagtagtggaggtagtggttgtacacttcgtacacacgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcttttcaaaatagt 4887128  T
Q  92 tgttgctatacttttccagtcttctgcaattttagg-cgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
     |||||||||||||||||||||| |||||| ||| | | |||||  |||| |   |||||||||  |||||||  ||| ||| || ||||||||||||||    
T  4887129 cgttgctatacttttccagtcttttgcaatcttaagacaagtttaaatcc-attgaacaacttttgaagctttaagttgcatatcttgatgaactgcagc 4887227  T
Q  191 ttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    |||||||||||| || ||||||||||||||||||||||||||||||    
T  4887228 ttctggtgattctcagcttctaatgaacttgcttctgatgacgtca 4887273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 29138536 - 29138299
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagc 91  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||         |||| ||||||||     
T  29138536 agagtagtggagatagtggttgtacacttcgtacaaacgtactatgacaacgctctttgaagaataagcatccaatgccttctaatccttccaaaatagt 29138437  T
Q  92 tgttgctatacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagct 191  Q
    ||||||||||| |||||||||||||||||| |||| ||| |||| || ||   ||||| ||||  || ||||  ||| |||||||||||||||| || ||    
T  29138436 tgttgctatac-tttccagtcttctgcaatcttagacgattttgaat-ctgttaaacagcttttgaaactttaagttgcatctcctgatgaactacaact 29138339  T
Q  192 tctggtgattcacaacttctaatgaacttgcttctgatga 231  Q
    ||||||||||| || ||||| || ||||||||||||||||    
T  29138338 tctggtgattctcagcttctgataaacttgcttctgatga 29138299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 26759156 - 26759395
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgccttt---------caaaatagc 91  Q
    |||||| ||||| ||||||||||||||||||||||||| |||||| ||| |||| |||||| |||||||||||||||||||          ||||||||     
T  26759156 agagtagtggaggtagtggttgtacacttcgtacaaacttactatttcagcgctctttgaagaataagcatccaatgccttcaaatccttccaaaatagt 26759255  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
     |||| |||||||||||||||||||||||| ||||||||| |||| ||||    ||||||||||  |||||||  ||| |||||||||||||||| || |    
T  26759256 cgttgttatacttttccagtcttctgcaatctttaggcgaatttgaatcc-gttaaacaacttttgaagctttaagttgcatctcctgatgaactacaac 26759354  T
Q  191 ttctggtgattcacaacttctaatgaacttgcttctgatga 231  Q
    |||||||||||| || ||||| || || |||||||||||||    
T  26759355 ttctggtgattctcagcttctgataaatttgcttctgatga 26759395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 21660219 - 21660449
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| ||||  ||||||||||||||||||||||||| ||||||||||||| | |||||  | |||||||||||||| ||| ||||||| |||||| ||    
T  21660219 agagtagtggaagtagtggttgtacacttcgtacaaacatactatgtcaacgatctttgaggactaagcatccaatgcatttgaaaatagttgttgccat 21660318  T
Q  101 acttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtga 199  Q
    |||||||| |||||||||||| ||||| |||||| |  |||| | ||||| ||||  || ||||| |||  || |||  |||||||| ||||||||||||    
T  21660319 acttttccggtcttctgcaatctttagacgagttagagtccttg-aaacagcttttgaaactttgagttcaatttccaaatgaactgtagcttctggtga 21660417  T
Q  200 ttcacaacttctaatgaacttgcttctgatga 231  Q
    | || ||||||| |||| || |||||||||||    
T  21660418 tacataacttctgatgacctagcttctgatga 21660449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 30742987 - 30743226
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagc 91  Q
    |||||| ||||| |||||||||||||||||||||||||||||| |||||||||| |||||| ||||| |||||||||         ||||||||||||      
T  30742987 agagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgaagaataaacatccaatgccttcaaatcctttcaaaataat 30743086  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
     |||||| | | |||||||||||||||||| ||||| |||||||| |||| |  ||||||||||  |||||||  ||| ||||||||||||||||||| |    
T  30743087 cgttgctttgcctttccagtcttctgcaatctttagacgagtttgaatcc-attaaacaacttttgaagctttaagttgcatctcctgatgaactgcaac 30743185  T
Q  191 ttctggtgattcacaacttctaatgaacttgcttctgatga 231  Q
    |||| || |||| || ||| | || || |||||||||||||    
T  30743186 ttctcgtaattctcagcttatgataaatttgcttctgatga 30743226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 11993895 - 11994134
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagc 91  Q
    |||||| ||||  |||||||||||||||||||||| ||||||| |||||||||| |||||| || ||||||||||||         || |||||| ||||    
T  11993895 agagtagtggaagtagtggttgtacacttcgtacatacgtactttgtcaacgctctttgaagaacaagcatccaatgctttcaaatcccttcaaattagc 11993994  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcc-tagaaaacaactttcaaagctttgggttacatctcctgatgaactgcag 189  Q
     ||||||  ||| |||||||||||||||||  |||| |||||||| |||| | |  |||| ||||  || ||||  ||| |||||||||||||||| |||    
T  11993995 cgttgcttcactattccagtcttctgcaatccttagacgagtttgaatccgttg--aacatcttttgaaactttaagttgcatctcctgatgaactacag 11994092  T
Q  190 cttctggtgattcacaacttctaatgaacttgcttctgatga 231  Q
    |||||||||||||||| ||||| || ||||||||||||||||    
T  11994093 cttctggtgattcacagcttctgataaacttgcttctgatga 11994134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 26765505 - 26765649
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagc 91  Q
    |||||| |||||  ||||||||||||||||||||||||||||||| ||| |||| |||||| |||||||||||||||         |||| ||||||||     
T  26765505 agagtagtggaggcagtggttgtacacttcgtacaaacgtactatttcagcgctctttgaagaataagcatccaatgccttcaaatccttccaaaatagt 26765604  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttg 135  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||    
T  26765605 tgttgctatacttttccagtcttctgcaatctttaggcgaatttg 26765649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 33933274 - 33933517
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct-ttttgaataataagcatccaatg---------cctttcaaaatag 90  Q
    |||||| ||||| |||||||||||||||||||||||||||||||| |||||||| ||||||  || ||||||||||||         |||||||||||||    
T  33933274 agagtagtggaggtagtggttgtacacttcgtacaaacgtactatatcaacgctcttttgaggaacaagcatccaatgcgtttaaatcctttcaaaatag 33933373  T
Q  91 ctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaac--tttcaaagctttgggttacatctcctgatgaactgc 187  Q
     |||||||  |||||||||||||| ||||||  |||| |||| ||| |||| |  |||||||  |||  |||||||  ||| ||||  ||||||||||||    
T  33933374 ttgttgcttcacttttccagtcttttgcaatccttagacgaggttgaatcccattaaacaacttttttgaagctttaagttgcatcctctgatgaactgc 33933473  T
Q  188 agcttctggtgattcacaacttctaatgaacttgcttctgatga 231  Q
    | ||| ||||||||| || ||||| || ||||||||||||||||    
T  33933474 aacttatggtgattctcagcttctgataaacttgcttctgatga 33933517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 145 - 236
Target Start/End: Complemental strand, 30115853 - 30115762
Alignment:
Q  145 aaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    ||||||||||  |||||||  ||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||    
T  30115853 aaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctgatgaacttgcttctaatgacgtca 30115762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 42243687 - 42243928
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct-ttttgaataataagcatccaatg---------cctttcaaaatag 90  Q
    |||||| ||||| |||||||||||||||||||||||||||| | |||||||||| |||| |  || || |||| ||||         |||||||||||||    
T  42243687 agagtagtggaggtagtggttgtacacttcgtacaaacgtattttgtcaacgctcttttaaggaacaaacatcaaatgtcttcaaatcctttcaaaatag 42243786  T
Q  91 ctgttgctatacttttccagtcttctgcaa-ttttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcag 189  Q
     |||||||  |||||||||||||||||||| |||||| |||||||| ||||    ||||| ||||  |||||||  ||| |||||||||||||||| |||    
T  42243787 ttgttgcttcacttttccagtcttctgcaatttttagacgagtttgaatcc-gttaaacagcttttgaagctttaagttgcatctcctgatgaactacag 42243885  T
Q  190 cttctggtgattcacaacttctaatgaacttgcttctgatgac 232  Q
    ||||||||||||| ||  || | || || ||||||||||||||    
T  42243886 cttctggtgattctcagtttttgataaatttgcttctgatgac 42243928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 28139614 - 28139755
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagc 91  Q
    |||||| ||||| ||||||||||||||||||||||||| ||||||||||||||| | |||| |||||||||||||||         |||||||||||||     
T  28139614 agagtagtggagatagtggttgtacacttcgtacaaacatactatgtcaacgctctatgaagaataagcatccaatgtctttcaatcctttcaaaatagt 28139713  T
Q  92 tgttgctatacttttccagtcttctgcaattttaggcgagtt 133  Q
     |||||||||||||| ||||||||| || | |||| ||||||    
T  28139714 cgttgctatactttttcagtcttctacattcttagacgagtt 28139755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 30115967 - 30115883
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaa 85  Q
    |||||| ||||| ||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||| |||||| |||||    
T  30115967 agagtagtggagatagtggttgtacatttcgtacaaacgtactatgtcaacgctctttgaagaataagcatcaaatgcccttcaa 30115883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 87 - 237
Target Start/End: Original strand, 5429985 - 5430136
Alignment:
Q  87 atagctgttgctatacttttccagtcttctgcaatt-ttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaact 185  Q
    ||||||||||||  |||||| ||||||||||||||  |||  |||| ||| |||| | |||||| ||||  |||| ||  ||| ||||||||||||||||    
T  5429985 atagctgttgcttcactttttcagtcttctgcaatccttaaacgaggttgaatcccataaaacagcttttgaagccttaagttgcatctcctgatgaact 5430084  T
Q  186 gcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtcac 237  Q
    ||||||||||||||||   | ||||| |||||||||||||||||||||||||    
T  5430085 gcagcttctggtgatttttaccttctgatgaacttgcttctgatgacgtcac 5430136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 14086669 - 14086427
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct-ttttgaataataagcatccaatgcct---------ttcaaaatag 90  Q
    |||||| ||||| ||| |||||||||||||||||||||||||| |||||||||| ||||||  || ||||||||||||| |         ||||||||||    
T  14086669 agagtagtggaggtagcggttgtacacttcgtacaaacgtactttgtcaacgctcttttgaggaacaagcatccaatgcattcaaatcacttcaaaatag 14086570  T
Q  91 ctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcag 189  Q
    | ||||||  |||||||||||||||||||||  |||| |||| ||| |||| |  ||||| ||||  |||| ||  ||| ||||  ||||||||||||||    
T  14086569 ccgttgcttcacttttccagtcttctgcaatccttagacgaggttgaatcccattaaacagcttttgaagccttaagttgcatcctctgatgaactgcag 14086470  T
Q  190 cttctggtgattcacaacttctaatgaacttgcttctgatgac 232  Q
    |||||||| |||   | ||| | || |||||||||||||||||    
T  14086469 cttctggtaatttttagcttttgataaacttgcttctgatgac 14086427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 237
Target Start/End: Original strand, 33022673 - 33022916
Alignment:
Q  3 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt---------tcaaaatagctg 93  Q
    |||| ||||| |||||||||||||||||||||||  ||||| |||||||||| |||||| || || |||||||||||||         ||||| |||  |    
T  33022673 agtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaaacatccaatgccttcaaatcctttcaaactagtcg 33022772  T
Q  94 ttgctatacttttccagtcttctgcaatt-ttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagctt 192  Q
    |||||  |||||||||||||||||||||  ||||  ||| ||  |||| |   |||| | ||  |||||||  ||| |||||||||||||||||||  ||    
T  33022773 ttgcttcacttttccagtcttctgcaatgcttagatgagattaaatcc-attgaacagcctttgaagctttatgttgcatctcctgatgaactgcaaatt 33022871  T
Q  193 ctggtgattcacaacttctaatgaacttgcttctgatgacgtcac 237  Q
    |||||||||  || ||||| |||||||||||||||||||||||||    
T  33022872 ctggtgattttcagcttctgatgaacttgcttctgatgacgtcac 33022916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 23391733 - 23391535
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc-ctttcaaaatagctgttgcta 99  Q
    |||||| || || ||||| |||||||||||||||||||| ||||||||||||||  ||||  ||||||||||||||||  |||||||||||| |||| ||    
T  23391733 agagtagtgcagatagtgattgtacacttcgtacaaacgaactatgtcaacgctccttgaggaataagcatccaatgctttttcaaaatagccgttgtta 23391634  T
Q  100 tacttttccagtcttctgcaatttt--aggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggt 197  Q
     |||||   ||||||||||||||||   |||||| ||| ||||| | ||||| ||||  ||||||| ||||  ||||  |||||| ||||||||||||||    
T  23391633 -actttcaaagtcttctgcaatttttctggcgagcttgaatccttg-aaacagcttttgaagctttaggtt-gatcttttgatgatctgcagcttctggt 23391537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 7745822 - 7745743
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| |||||| || ||||||||||||||||    
T  7745822 gagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgcctt 7745743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 32160773 - 32160853
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||| ||||||| |||||||||||||| |||| || |||||||||| ||||||  ||||||||||||||||||    
T  32160773 agagtagtggaggtagtggtcgtacacttcgtacatacgttctttgtcaacgctctttgaaggataagcatccaatgcctt 32160853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 642837 - 642757
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || || ||||||||||||||||    
T  642837 agagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaaaaacaagcatccaatgcctt 642757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 13545642 - 13545562
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||| | ||||||||||||||||||||   ||||| |||||||||| |||||| || ||||||||||||||||    
T  13545642 agagtagtggaggtggtggttgtacacttcgtacacttgtactttgtcaacgctctttgaagaacaagcatccaatgcctt 13545562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 23413103 - 23413027
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 78  Q
    ||||| ||||| |||||||||||||||||||||||  |||||||||||||||| ||  || || |||||||||||||    
T  23413103 gagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaaaaacaagcatccaatgc 23413027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 26784362 - 26784434
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatcca 74  Q
    ||||| ||||| |||||||||||||||||||||||  |||||||||||||||| ||  || ||||||||||||    
T  26784362 gagtagtggaggtagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaataagcatcca 26784434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 21910564 - 21910643
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || || ||||||||||||||||    
T  21910564 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 21910643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 41566563 - 41566484
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| ||||| |||||||||||||||||||||||  ||||||| |||||||| ||  || ||||| |||||||||||||    
T  41566563 gagtagtggagatagtggttgtacacttcgtacaattgtactatatcaacgctcttcaaagaataaacatccaatgcctt 41566484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 236
Target Start/End: Original strand, 26784541 - 26784607
Alignment:
Q  170 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    ||||||||| |||||| ||||||||||||||   || ||||| ||||||||||||||||||||||||    
T  26784541 catctcctgctgaactacagcttctggtgatcttcagcttctgatgaacttgcttctgatgacgtca 26784607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 20550902 - 20550981
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||| |||||||||||||||||||||||  ||| | |||||||||| ||| || || ||||||||||||||||    
T  20550902 agagtagtggaggtagtggttgtacacttcgtacaattgta-tttgtcaacgctctttaaagaacaagcatccaatgcctt 20550981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 21072357 - 21072293
Alignment:
Q  14 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 78  Q
    |||||||||||||||||||||||  |||||||||||||||| ||  || || |||||||||||||    
T  21072357 tagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgc 21072293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 31117884 - 31118088
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc---------ctttcaaaatagc 91  Q
    |||||| ||||  |||||| |||||||||||||||   ||||| ||||||| || |||||| || |||||||||||||         |||||||| |||     
T  31117884 agagtagtggaagtagtggatgtacacttcgtacatttgtactttgtcaacactctttgaagaacaagcatccaatgccttcaaattctttcaaattagt 31117983  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
     ||||||  |||||||||||||||||||||  |||| |||||||  ||||   |||  | ||||  |||||||  ||| |||||||||||||||||||||    
T  31117984 cgttgcttcacttttccagtcttctgcaatgcttagacgagtttaaatccgttaaacaaccttttgaagctttatgttgcatctcctgatgaactgcagc 31118083  T
Q  191 ttctg 195  Q
    |||||    
T  31118084 ttctg 31118088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 19536429 - 19536378
Alignment:
Q  3 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 54  Q
    |||| ||||| |||||||||||||||||||||||  ||||||||||||||||    
T  19536429 agtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgct 19536378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 23478534 - 23478596
Alignment:
Q  165 ggttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctg 227  Q
    |||| ||||| ||||||||||| |||||||||||||  ||| ||||| |||||||||||||||    
T  23478534 ggttgcatcttctgatgaactgtagcttctggtgatatacagcttctgatgaacttgcttctg 23478596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 89551 - 89503
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaa 50  Q
    ||||| ||||| |||||||||||||||||||||||  ||||||||||||    
T  89551 gagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaa 89503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 6499247 - 6499299
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 54  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| ||||||||||    
T  6499247 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgct 6499299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 12352924 - 12352872
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 54  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| ||||||||||    
T  12352924 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgct 12352872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 9398863 - 9398784
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| ||||| |||||||| ||||||||||||||  ||||| |||||||||| ||  || | ||||||| |||||||||    
T  9398863 gagtagtggagatagtggttatacacttcgtacaattgtactttgtcaacgctcttcaaaaagtaagcattcaatgcctt 9398784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 21199132 - 21199053
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| ||||| ||||| |||||||||||||||||  ||||| ||||||||||||   || ||  |||||||||||||||    
T  21199132 gagtagtggaggtagtgattgtacacttcgtacaattgtactttgtcaacgctttccaaagaacgagcatccaatgcctt 21199053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 233
Target Start/End: Complemental strand, 41566384 - 41566321
Alignment:
Q  170 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacg 233  Q
    |||||||||||||||| || |||||| ||||   || ||||| |||||||||||||||||||||    
T  41566384 catctcctgatgaactacaacttctgatgatcttcagcttctgatgaacttgcttctgatgacg 41566321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 23881076 - 23881154
Alignment:
Q  3 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||| ||||| |||||||||||||||||||||||  | ||| |||||||||| ||  || |  ||||||||||||||||    
T  23881076 agtagtggagatagtggttgtacacttcgtacaattgcactttgtcaacgctcttcaaaaagcaagcatccaatgcctt 23881154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 11208115 - 11208039
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 78  Q
    |||||| ||||| |||||||| ||||||||||||| | ||||| |||||||||| ||||||   | ||||||||||||    
T  11208115 agagtagtggaggtagtggttatacacttcgtacata-gtactttgtcaacgctctttgaaggctgagcatccaatgc 11208039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 6512545 - 6512505
Alignment:
Q  14 tagtggttgtacacttcgtacaaacgtactatgtcaacgct 54  Q
    |||||||||||||||||||||||  ||||| ||||||||||    
T  6512545 tagtggttgtacacttcgtacaattgtactttgtcaacgct 6512505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 17814976 - 17815028
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 54  Q
    ||||| ||||| ||||||||||||||| |||||||  ||||| ||||||||||    
T  17814976 gagtagtggagatagtggttgtacactccgtacaattgtactttgtcaacgct 17815028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 134; Significance: 7e-70; HSPs: 73)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 27871725 - 27871961
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctt-tttgaataataagcatccaatgcctttcaaaatagctgttgcta 99  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||| ||||| |    
T  27871725 agagtagtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgcttctttgaagaataagcatccaatgcatttcaaaatagccgttgcca 27871824  T
Q  100 tacttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtg 198  Q
    |||| |||||| |||||||||||| |||| || |||| ||||| |||| |||||||  |||||||  ||| ||| |||||||||||||||||||||||||    
T  27871825 tactattccagacttctgcaatttctaggtgaatttgaatccttgaaa-caacttttgaagctttaagttgcatttcctgatgaactgcagcttctggtg 27871923  T
Q  199 attcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    ||||||| ||||| ||||||||||||||||||||||||    
T  27871924 attcacagcttctgatgaacttgcttctgatgacgtca 27871961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 14425454 - 14425688
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||| |||||||||||| ||||| ||    
T  14425454 agagtagtggagatagtggttgtacacttcgtacaaacgtaatatgtcaacgctctttgaagaataagcatccaatgcatttcaaaatagccgttgccat 14425553  T
Q  101 acttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgat 200  Q
    |||| |||||||||||||||| ||||||||||||| ||||| | ||||||||||  |||||||  ||| ||||||||||||||||  ||||||||||||     
T  14425554 acttntccagtcttctgcaatgttaggcgagtttgaatccttg-aaacaacttttgaagctttaagttgcatctcctgatgaactntagcttctggtgaa 14425652  T
Q  201 tcacaacttctaatgaacttgcttctgatgacgtca 236  Q
     |||| ||| |  |||||||||||||||||||||||    
T  14425653 acacancttttgntgaacttgcttctgatgacgtca 14425688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 48062971 - 48062741
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||  ||||| ||    
T  48062971 agagtaatggagatagtggttgtacgcttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagtcgttgccat 48062872  T
Q  101 acttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtga 199  Q
    |||||||||||||||  |||||| |||||||||||| || || | ||||||||||  |||||||  ||| |||||| |||||||||||||||||||||||    
T  48062871 acttttccagtcttcgacaatttctaggcgagtttgaattcttg-aaacaacttttgaagctttaagttgcatctcttgatgaactgcagcttctggtga 48062773  T
Q  200 ttcacaacttctaatgaacttgcttctgatga 231  Q
    | |||| ||||| ||| |||||||||||||||    
T  48062772 tacacagcttctgatggacttgcttctgatga 48062741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 19339401 - 19339166
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||  ||||| |     
T  19339401 agagtagtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcatttcaaaatagtcgttgccac 19339302  T
Q  101 acttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtga 199  Q
    ||||||||||||||||||||| |||||||||||| |  |||| | |||||  |||  || ||||  |||  |||||||||||||||||||||||||||||    
T  19339301 acttttccagtcttctgcaatctttaggcgagttagagtccttg-aaacaggttttgaaactttaagttcaatctcctgatgaactgcagcttctggtga 19339203  T
Q  200 ttcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    | |||| ||||| |||||||||||||||| |||||||    
T  19339202 tacacagcttctgatgaacttgcttctgaggacgtca 19339166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 8 - 236
Target Start/End: Complemental strand, 32264862 - 32264633
Alignment:
Q  8 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctt-tttgaataataagcatccaatgcctttcaaaatagctgttgctatactttt 106  Q
    ||||| || ||||||||||||  ||||||||||||||||||||||||| |||||| ||||| |||||||||| |||||||||||| ||||| ||||||||    
T  32264862 tggaggtactggttgtacactctgtacaaacgtactatgtcaacgcttctttgaagaataaacatccaatgcatttcaaaatagccgttgccatactttt 32264763  T
Q  107 ccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattcaca 205  Q
    ||||||||||||||||| |||||||||||| ||||| | ||| ||||||  |||||||  ||  ||||||||||||||||||||||||||||||| ||||    
T  32264762 ccagtcttctgcaatttctaggcgagtttgaatccttg-aaataacttttgaagctttaagtcgcatctcctgatgaactgcagcttctggtgatacaca 32264664  T
Q  206 acttctaatgaacttgcttctgatgacgtca 236  Q
    |||| | |||| ||| |||||||||||||||    
T  32264663 acttttgatgatctttcttctgatgacgtca 32264633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 1293037 - 1293182
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||    
T  1293037 agagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagttgttgctat 1293136  T
Q  101 acttttccagtcttctgcaattttaggcgagtttgtatcctagaaa 146  Q
    |||||||||||||| ||||||||||| |||||||| ||||| ||||    
T  1293137 acttttccagtcttttgcaattttagtcgagtttgaatccttgaaa 1293182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 21381580 - 21381344
Alignment:
Q  1 agagtaatggagttagtggttgtacactt-cgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgcta 99  Q
    |||||| ||||  ||||||||||||| || |||||| |||||||||||||||||| |||||| |||| ||||||||||| |||||||||||| ||||| |    
T  21381580 agagtagtggaagtagtggttgtacattttcgtacagacgtactatgtcaacgctctttgaagaataggcatccaatgcatttcaaaatagccgttgcca 21381481  T
Q  100 tacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtg 198  Q
     ||||||||||||||||||||| |||||||||||| |  |||| | ||||||||||  || || |  |||  ||||||||||||||||||||||||||||    
T  21381480 cacttttccagtcttctgcaatctttaggcgagttagagtccttg-aaacaacttttgaaactataagttcaatctcctgatgaactgcagcttctggtg 21381382  T
Q  199 attcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    || |||| ||||| ||||||| ||||||||||||||||    
T  21381381 atacacagcttctgatgaactagcttctgatgacgtca 21381344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 8182937 - 8183175
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagc 91  Q
    |||||| ||||| |||||||||||||||||||||| ||||| |||||||||||| |||||| |||||||||| | ||         |||||||||||||     
T  8182937 agagtagtggagatagtggttgtacacttcgtacagacgtattatgtcaacgctctttgaagaataagcatcaagtgtctttcaatcctttcaaaatagt 8183036  T
Q  92 tgttgctatacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagct 191  Q
    |||||||||||||||||||||||||||||| |||| |||||||| | | |  | | |||||||  |||||||| ||| ||||||||||||||||||||||    
T  8183037 tgttgctatacttttccagtcttctgcaatcttagacgagtttgaaacttttata-caactttttaagctttgagttgcatctcctgatgaactgcagct 8183135  T
Q  192 tctggtgattcacaacttctaatgaacttgcttctgatga 231  Q
    |||||||||||||| ||| | |||||||||||||| ||||    
T  8183136 tctggtgattcacagcttttgatgaacttgcttctaatga 8183175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 24794866 - 24794732
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctt-tttgaataataagcatccaatgcctttcaaaatagctgttgcta 99  Q
    |||||| ||||  |||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||| |||||||||||| ||||| |    
T  24794866 agagtagtggaagtagtggttgtacacttcgtacaaacgtactatgtcaacgcttctttgaggaataagcatccaatgcatttcaaaatagccgttgcca 24794767  T
Q  100 tacttttccagtcttctgcaattt-taggcgagtt 133  Q
    |||||||||||||||||||||||| ||||||||||    
T  24794766 tacttttccagtcttctgcaatttctaggcgagtt 24794732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 8 - 216
Target Start/End: Complemental strand, 2265663 - 2265446
Alignment:
Q  8 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgccttt---------caaaatagctgttgct 98  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||  ||| ||||          ||||||||| ||||||    
T  2265663 tggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcattaaataccttcaaatccttccaaaatagccgttgct 2265564  T
Q  99 atacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggt 197  Q
    |||||||| |||||||||||||| ||||| |||||||| ||| |   ||||| |||| ||||||||  ||| |||||||||||||||| || ||||||||    
T  2265563 atactttttcagtcttctgcaatctttagacgagtttgaatc-tgttaaacagcttttaaagctttaagttgcatctcctgatgaactacaacttctggt 2265465  T
Q  198 gattcacaacttctaatga 216  Q
    ||||| || ||||| ||||    
T  2265464 gattctcagcttctgatga 2265446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 4821481 - 4821720
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc--------ctttcaaaatagct 92  Q
    |||||| ||||| |||||||||||||||||||||||||||||| | |||||||| |||||| || |||||||||||||        |||||||||||||     
T  4821481 agagtagtggaggtagtggttgtacacttcgtacaaacgtactttttcaacgctctttgaagaacaagcatccaatgccttcaaatctttcaaaatagcc 4821580  T
Q  93 gttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagct 191  Q
    ||||||  ||||||| ||||||||| ||| ||||| |||||||| ||  |   ||||| ||||  |||||||  |||  |||||| ||||||||||||||    
T  4821581 gttgctccacttttctagtcttctgtaatctttagacgagtttgaat-ttgttaaacagcttttgaagctttaagttgtatctccggatgaactgcagct 4821679  T
Q  192 tctggtgattcacaacttctaatgaacttgcttctgatgac 232  Q
    ||||||||||  || ||||| | ||||||||||||||||||    
T  4821680 tctggtgattttcagcttctgacgaacttgcttctgatgac 4821720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 48806030 - 48805800
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| ||||  |||||||||||||||| |||| ||||||||||||||||||| |||||| ||  |||||||||||| ||||||| |||| ||||| ||    
T  48806030 agagtagtggaagtagtggttgtacactttgtacgaacgtactatgtcaacgctctttgaagaaatagcatccaatgcatttcaaactagccgttgccat 48805931  T
Q  101 acttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtga 199  Q
    | |  ||||||||| || ||||| |||||||||| |  |||| | ||||| ||||  ||   ||| ||| |||||| |||||||||||||||||||||||    
T  48805930 attcctccagtcttatgtaatttctaggcgagttagagtccttg-aaacagcttttgaaaacttgagttccatctcttgatgaactgcagcttctggtga 48805832  T
Q  200 ttcacaacttctaatgaacttgcttctgatga 231  Q
    | || | ||||| |||||||| ||||||||||    
T  48805831 tacatagcttctgatgaactttcttctgatga 48805800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 4412113 - 4411883
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| ||||  ||||||||||||| |||||||| ||| || ||||||||||| |||||  | |||||||||||||| ||||||  |||| ||||  ||    
T  4412113 agagtagtggaagtagtggttgtacagttcgtacagacgcacaatgtcaacgctctttgagaattaagcatccaatgcttttcaagttagccgttgtcat 4412014  T
Q  101 acttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtga 199  Q
    |||| |||||||||||||||||| |||||||||| |  |||| | ||||| ||||  || ||||  |||  |||||| ||||||||||||||||||||||    
T  4412013 acttctccagtcttctgcaatttctaggcgagttagagtccttg-aaacagcttttgaaactttaagttcaatctccagatgaactgcagcttctggtga 4411915  T
Q  200 ttcacaacttctaatgaacttgcttctgatga 231  Q
    |  ||| ||||| ||||| |||||||| ||||    
T  4411914 taaacagcttctgatgaatttgcttctaatga 4411883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 16112035 - 16111791
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc---------ctttcaaaatagc 91  Q
    |||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| |||||| || |||||||||||||         ||| ||||| ||     
T  16112035 agagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaatttcttccaaaaaagt 16111936  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
     ||||||  |||||| | |||||||||| | ||||| |||| ||| |||| | |||||||||||  |||||||  ||| ||||  ||||| |||||||||    
T  16111935 cgttgcttcactttttccgtcttctgcactctttagacgaggttgaatcc-ataaaacaacttttgaagctttaagttgcatcctctgatcaactgcagc 16111837  T
Q  191 ttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    |||||||||||   | |||||||| |||||||||||||||||||||    
T  16111836 ttctggtgatttttatcttctaataaacttgcttctgatgacgtca 16111791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 231
Target Start/End: Complemental strand, 12174479 - 12174252
Alignment:
Q  14 tagtggttgtacacttcgtacaaacgtactatgtcaacgct-ttttgaataataagcatccaatg---------cctttcaaaatagctgttgctatact 103  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||  || ||||||||||||         |||||||||||||  ||||||  |||    
T  12174479 tagtggttgtacacttcgtacaaacgtactttgtcaacgctcttttgaggaacaagcatccaatgcgttcaaatcctttcaaaatagtcgttgcttcact 12174380  T
Q  104 tttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattc 202  Q
    ||||||||||||||||||  |||| |||| ||| |||| | |||||| ||||  |||| ||  ||| ||||  ||||||||||||||||||||||||||     
T  12174379 tttccagtcttctgcaatccttagacgaggttgaatcccataaaacagcttttgaagc-ttaagttgcatcctctgatgaactgcagcttctggtgattt 12174281  T
Q  203 acaacttctaatgaacttgcttctgatga 231  Q
      | ||||| || ||||||||||||||||    
T  12174280 ttagcttctgataaacttgcttctgatga 12174252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 14426554 - 14426757
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagc 91  Q
    |||||| ||||| |||||||||||||||| ||||||||||||| |||||||||| |||||| || ||||||||||||         |||||||||||||     
T  14426554 agagtagtggaggtagtggttgtacacttagtacaaacgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaaatagt 14426653  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
     ||||||  ||||||||||||||||||||| |||||  ||||||| |||| |  ||||| |||   |||||||  ||| ||||||||||||||||||| |    
T  14426654 cgttgcttcacttttccagtcttctgcaatctttagatgagtttgaatcc-attaaacagcttctgaagctttaagttgcatctcctgatgaactgcacc 14426752  T
Q  191 ttctg 195  Q
    |||||    
T  14426753 ttctg 14426757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 35952839 - 35952599
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagc 91  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||  || || |||||||||         |||||||||||||     
T  35952839 agagtaatggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgatgaacaaacatccaatgccttcaaatcctttcaaaatagt 35952740  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
     ||||||  |||||||||||||||| ||||  |||| |||| ||| |||| |  ||||| ||||  |||| ||  ||| ||||  ||||||||||||| |    
T  35952739 cgttgcttcacttttccagtcttcttcaatccttagacgaggttgaatcccattaaacagcttttgaagccttaagttgcatcctctgatgaactgcaac 35952640  T
Q  191 ttctggtgattcacaacttctaatgaacttgcttctgatga 231  Q
    |||||||||||   | ||||| || ||||||||||||||||    
T  35952639 ttctggtgatttttagcttctgataaacttgcttctgatga 35952599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 237
Target Start/End: Complemental strand, 48237051 - 48236808
Alignment:
Q  3 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt---------tcaaaatagctg 93  Q
    |||| ||||| |||||||||||||||||||||||  ||||| |||||||||| |||||| ||||||||||  |||||||         ||||| | |  |    
T  48237051 agtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaataagcatctgatgccttcaaatcctttcaaacttgtcg 48236952  T
Q  94 ttgctatacttttccagtcttctgcaatt-ttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagctt 192  Q
    |||||  || ||| ||||||| ||||||  |||| |||| ||| |||| |   |||||||||  |||||||  ||| |||||||||||||||||||||||    
T  48236951 ttgcttcaccttttcagtcttatgcaatgcttagacgagattgaatcc-attgaacaacttttgaagctttaagttgcatctcctgatgaactgcagctt 48236853  T
Q  193 ctggtgattcacaacttctaatgaacttgcttctgatgacgtcac 237  Q
    |||||||||  || ||||| |||||||||||||||||||||||||    
T  48236852 ctggtgattttcagcttctgatgaacttgcttctgatgacgtcac 48236808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 20 - 237
Target Start/End: Complemental strand, 16543152 - 16542926
Alignment:
Q  20 ttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt---------tcaaaatagctgttgctatacttttccag 110  Q
    |||||||| ||||||||||||||| |||||  ||| |||||| || ||||||||||||||||         |||||||||  ||||||  ||||||||||    
T  16543152 ttgtacacatcgtacaaacgtactttgtcagagctctttgaagaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgcttcacttttccag 16543053  T
Q  111 tcttctgcaatt-ttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattcacaactt 209  Q
    |||||||||||  |||  |||||||| |||| |  ||||| ||||  |||| ||  ||| ||||||||||||||||||||||| ||||||||  ||  ||    
T  16543052 tcttctgcaatcattaaacgagtttgaatcc-attaaacagcttttgaagcattatgttgcatctcctgatgaactgcagcttatggtgattttcagttt 16542954  T
Q  210 ctaatgaacttgcttctgatgacgtcac 237  Q
    || |||||||| ||||||||||||||||    
T  16542953 ctgatgaactttcttctgatgacgtcac 16542926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 20 - 237
Target Start/End: Original strand, 16622510 - 16622736
Alignment:
Q  20 ttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt---------tcaaaatagctgttgctatacttttccag 110  Q
    |||||||| ||||||||||||||| |||||  ||| |||||| || ||||||||||||||||         |||||||||  ||||||  ||||||||||    
T  16622510 ttgtacacatcgtacaaacgtactttgtcagagctctttgaagaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgcttcacttttccag 16622609  T
Q  111 tcttctgcaatt-ttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattcacaactt 209  Q
    |||||||||||  |||  |||||||| |||| |  ||||| ||||  |||| ||  ||| ||||||||||||||||||||||| ||||||||  ||  ||    
T  16622610 tcttctgcaatcattaaacgagtttgaatcc-attaaacagcttttgaagcattatgttgcatctcctgatgaactgcagcttatggtgattttcagttt 16622708  T
Q  210 ctaatgaacttgcttctgatgacgtcac 237  Q
    || |||||||| ||||||||||||||||    
T  16622709 ctgatgaactttcttctgatgacgtcac 16622736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 237
Target Start/End: Complemental strand, 28622494 - 28622262
Alignment:
Q  14 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt---------tcaaaatagctgttgctatactt 104  Q
    |||||||||||||| ||||||||  ||||| |||||||||  |||||| || || |||||||||||||         ||||| |||| ||||||  ||||    
T  28622494 tagtggttgtacacctcgtacaattgtactttgtcaacgccctttgaaaaacaaacatccaatgccttcaaatcctttcaaattagccgttgcttcactt 28622395  T
Q  105 ttccagtcttctgcaatt-ttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattca 203  Q
    ||| ||| |||||||||  |||| |||| ||| |||| |   |||||||||  |||||||  ||| ||||||||||||||||||||||||||||||||      
T  28622394 ttctagtattctgcaatgcttagacgagattgaatcc-attgaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgatttt 28622296  T
Q  204 caacttctaatgaacttgcttctgatgacgtcac 237  Q
     | ||| | |||||||||||||||||||||||||    
T  28622295 tagcttatgatgaacttgcttctgatgacgtcac 28622262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 197
Target Start/End: Complemental strand, 15704620 - 15704445
Alignment:
Q  31 gtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagctgttgctatacttttccagtcttctgcaat 121  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||         |||| ||||||||  |||||||||||||||||||||||||||||    
T  15704620 gtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttcaaatccttccaaaatagtcgttgctatacttttccagtcttctgcaat 15704521  T
Q  122 -tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggt 197  Q
     ||||| |||||||| ||||    ||||| ||||  |||||||  ||| ||||| |||||||||| || ||||||||    
T  15704520 ctttagacgagtttgaatcc-gttaaacagcttttgaagctttaagtttcatcttctgatgaactacaacttctggt 15704445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 21283524 - 21283444
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||||||||| ||||||||||||||||    
T  21283524 agagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaataacaagcatccaatgcctt 21283444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 30944474 - 30944271
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagc 91  Q
    |||||| ||||| |||||||||||||||||||||||  ||| | |||||||||| |||||| |||||||||||||||         |||||||||||||     
T  30944474 agagtagtggaggtagtggttgtacacttcgtacaattgtattttgtcaacgctctttgaagaataagcatccaatgccttcaaatcctttcaaaatagt 30944375  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcc-tagaaaacaactttcaaagctttgggttacatctcctgatgaactgcag 189  Q
    |||||||  ||||||||| |||||||||||  |||| |||| ||  |||| | |  |||||| ||  |||||||  ||| ||||||||||||||||||||    
T  30944374 tgttgcttcacttttccaatcttctgcaatacttagacgagattaaatccgttg--aacaacctttgaagctttaagttgcatctcctgatgaactgcag 30944277  T
Q  190 cttctg 195  Q
    ||||||    
T  30944276 cttctg 30944271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 19711164 - 19711084
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||  |||||||||||||||||||||||||||||| |||||| ||| ||||||  ||||||||||||||||||    
T  19711164 agagtagtggaaatagtggttgtacacttcgtacaaacgtactttgtcaatgctctttgaaggataagcatccaatgcctt 19711084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 23280109 - 23280029
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| |||||| || ||||||||||||||||    
T  23280109 agagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgcctt 23280029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 33605705 - 33605772
Alignment:
Q  14 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||||||||||||||||||||| |||||| |||||||||| |||||| || ||||||||||||||||    
T  33605705 tagtggttgtacacttcgtacaatcgtactttgtcaacgctctttgaagaacaagcatccaatgcctt 33605772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 170 - 237
Target Start/End: Complemental strand, 33691683 - 33691616
Alignment:
Q  170 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtcac 237  Q
    ||||||||||||||||  ||||||||||||||  |||||||||||||||||||||||||| |||||||    
T  33691683 catctcctgatgaactagagcttctggtgattttcaacttctaatgaacttgcttctgataacgtcac 33691616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 121
Target Start/End: Original strand, 13692372 - 13692478
Alignment:
Q  15 agtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctatacttttccagtctt 114  Q
    ||||||||||||||||||||||  ||||| ||||||| || | | || |  |||||||||||| |||||||||||| |||||||  ||| ||||||||||    
T  13692372 agtggttgtacacttcgtacaattgtactttgtcaacactctataaagatcaagcatccaatgtctttcaaaatagttgttgcttcactcttccagtctt 13692471  T
Q  115 ctgcaat 121  Q
    |||||||    
T  13692472 ctgcaat 13692478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 28409046 - 28409126
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| |||||| || || |||||||||||||    
T  28409046 agagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaaacatccaatgcctt 28409126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 13138045 - 13137966
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||||||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || || ||||||||||||||||    
T  13138045 gagtaatggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 13137966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 29935507 - 29935432
Alignment:
Q  3 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 78  Q
    |||| ||||| |||||||||||||||||||||||  |||||||||||||||| ||| || || |||||||||||||    
T  29935507 agtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctctttaaagaacaagcatccaatgc 29935432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 30945505 - 30945427
Alignment:
Q  3 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||| ||||| |||||||||||||||||||||||  ||||| |||||||||| |||||  || ||||||||||||||||    
T  30945505 agtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaggaacaagcatccaatgcctt 30945427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 231
Target Start/End: Complemental strand, 4429162 - 4428999
Alignment:
Q  70 atccaatgcctttcaaaatagctgttgc--tatacttttccagtcttctgcaatttt-aggcgagtttgtatcctagaaaacaactttcaaagctttggg 166  Q
    ||||||||| ||||||  |||| |||||  ||||||| ||| ||||||||||||||| ||||||||| |  |||| |||| || ||||  || ||||  |    
T  4429162 atccaatgcttttcaagttagccgttgccatatacttctcctgtcttctgcaatttttaggcgagttagagtccttgaaa-cagcttttgaaactttaag 4429064  T
Q  167 ttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatga 231  Q
    ||  |||||| |||||||||||||||||||||||  ||| ||||| ||||| |||||||||||||    
T  4429063 ttcaatctccagatgaactgcagcttctggtgataaacagcttctgatgaatttgcttctgatga 4428999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 15467923 - 15468003
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||| || ||||||||||| ||||||||  ||||| |||||||||| |||||| || ||||||||||||||||    
T  15467923 agagtagtggaggtaatggttgtacacctcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgcctt 15468003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 19237194 - 19237114
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||| |||||||||||||||||||| ||  ||| | |||||||||| |||||| || ||||||||||||||||    
T  19237194 agagtagtggaggtagtggttgtacacttcgtataattgtagtttgtcaacgctctttgaagaacaagcatccaatgcctt 19237114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 237
Target Start/End: Original strand, 33605858 - 33605938
Alignment:
Q  157 aagctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtcac 237  Q
    |||||||  ||| ||||||||||||||||||||||||||||||||  || ||||| ||||| | | |||||||||||||||    
T  33605858 aagctttatgttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatgaattcgattctgatgacgtcac 33605938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 44467071 - 44467151
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||| |||||||||||||||||||||||  ||||| ||||||| || ||| || || ||||||||||||||||    
T  44467071 agagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacactctttaaagaacaagcatccaatgcctt 44467151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 2913758 - 2913679
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || || ||||||||||||||||    
T  2913758 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 2913679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 13880112 - 13880191
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || |||||||||| ||||||||    
T  13880112 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaataagcatctaatgcctt 13880191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 16310045 - 16309978
Alignment:
Q  14 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||||||||||||||||||||  |||||||||||||||| ||  || || ||||||||||||||||    
T  16310045 tagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgcctt 16309978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 331659 - 331731
Alignment:
Q  8 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| ||||||||||||||||||||||   ||||| ||||||||| ||||||  |||||||||||||||||||    
T  331659 tggaggtagtggttgtacacttcgtacatttgtactttgtcaacgc-ttttgagcaataagcatccaatgcctt 331731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 122
Target Start/End: Complemental strand, 16316707 - 16316578
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagct 92  Q
    ||||| ||||| |||||||||||||||||||||||  ||||||| |||||||| ||  || || ||||||||||||         |||||||||||||||    
T  16316707 gagtagtggagatagtggttgtacacttcgtacaattgtactatttcaacgctcttcaaagaacaagcatccaatggcttcaaatcctttcaaaatagct 16316608  T
Q  93 gttgctatacttttccagtcttctgcaatt 122  Q
    ||||||  ||| |||  |||||||||||||    
T  16316607 gttgcttcactcttctggtcttctgcaatt 16316578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 9069570 - 9069650
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgccttt 82  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||| |||  ||||| || |||||| ||||||||||    
T  9069570 gagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaatgctccttgaagaacaagcatacaatgccttt 9069650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 13648737 - 13648789
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 54  Q
    ||||| ||||| |||||||||||||||||||||||  ||||||||||||||||    
T  13648737 gagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgct 13648789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 22578172 - 22578092
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||| || || || ||| |||||||||    
T  22578172 agagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttttaagaacaatcattcaatgcctt 22578092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 24788148 - 24788228
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||| |||||||||||||||||||||||  ||||| ||||||  || |||||| || ||||| ||||||||||    
T  24788148 agagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaattctctttgaagaacaagcacccaatgcctt 24788228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 9709940 - 9709873
Alignment:
Q  14 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||||| |||||||||||||   |||||||||||||||| |||||| || ||||||| ||||||||    
T  9709940 tagtggttttacacttcgtacagttgtactatgtcaacgctctttgaagaacaagcatctaatgcctt 9709873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 15088528 - 15088603
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg 77  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || || ||||||||||||    
T  15088528 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttaaaagaacaagcatccaatg 15088603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 21692295 - 21692374
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| ||||| ||||||||||||||||| |||||  ||||| |||||||||| ||  || || ||||||||||||||||    
T  21692295 gagtagtggaggtagtggttgtacacttcatacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 21692374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 33691863 - 33691792
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatc 72  Q
    |||||| ||||| |||||||| ||||||||||||||  ||||| |||||||||| |||||| || |||||||    
T  33691863 agagtagtggaggtagtggttatacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatc 33691792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 39284714 - 39284635
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || || || |||||||||||||    
T  39284714 gagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaaacatccaatgcctt 39284635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 236
Target Start/End: Complemental strand, 2913579 - 2913513
Alignment:
Q  170 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    |||||||||||||||| ||| ||||||||||   || ||||| |||||||||||| |||||||||||    
T  2913579 catctcctgatgaactacagtttctggtgatcttcatcttctgatgaacttgcttttgatgacgtca 2913513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 5000972 - 5000922
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacg 52  Q
    ||||| ||||| |||||||||||||||||||||||  ||||||||||||||    
T  5000972 gagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacg 5000922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 236
Target Start/End: Original strand, 21695588 - 21695654
Alignment:
Q  170 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    |||||| ||||||||| ||||||||||||||   || ||||| |||||||||||| |||||||||||    
T  21695588 catctcttgatgaacttcagcttctggtgatcttcagcttctgatgaacttgcttatgatgacgtca 21695654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 236
Target Start/End: Original strand, 30026092 - 30026158
Alignment:
Q  170 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    |||||| |||||||||  |||||||||||||   || ||||| ||||||||||||||||||||||||    
T  30026092 catctcttgatgaactagagcttctggtgatcttcagcttctgatgaacttgcttctgatgacgtca 30026158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 236
Target Start/End: Complemental strand, 39284536 - 39284470
Alignment:
Q  170 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    ||||| ||||||| || ||||||||||||||   || ||||| ||||||||||||||||||||||||    
T  39284536 catcttctgatgatcttcagcttctggtgatcttcagcttctgatgaacttgcttctgatgacgtca 39284470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 236
Target Start/End: Original strand, 44467252 - 44467318
Alignment:
Q  170 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    |||||||||||||||| |||||| |||||||   || ||||| |||||||||||||||||| |||||    
T  44467252 catctcctgatgaacttcagcttttggtgatcttcagcttctgatgaacttgcttctgatggcgtca 44467318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 232
Target Start/End: Original strand, 5826170 - 5826211
Alignment:
Q  191 ttctggtgattcacaacttctaatgaacttgcttctgatgac 232  Q
    ||||||||||||||| ||||| ||||||||||||||||||||    
T  5826170 ttctggtgattcacagcttctgatgaacttgcttctgatgac 5826211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 9709788 - 9709744
Alignment:
Q  157 aagctttgggttacatctcctgatgaactgcagcttctggtgatt 201  Q
    |||||||  ||| ||||||||||||||||||||||||||||||||    
T  9709788 aagctttatgttgcatctcctgatgaactgcagcttctggtgatt 9709744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 13018655 - 13018603
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 54  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| ||||||||||    
T  13018655 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgct 13018603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 13730825 - 13730749
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 78  Q
    ||||| ||||| || ||||||||||||||||||||  ||||| |||||||||| ||  || || |||||||||||||    
T  13730825 gagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgc 13730749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 14193121 - 14193201
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| | ||| ||||||||||||||||||||||   ||||| ||| |||||| |||||| || |||||| |||||||||    
T  14193121 agagtagtagaggtagtggttgtacacttcgtacacttgtactttgttaacgctctttgaagaacaagcattcaatgcctt 14193201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 21695424 - 21695488
Alignment:
Q  17 tggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||||||||||||||||||  ||||| |||||||||| ||  || || ||||||||||||||||    
T  21695424 tggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 21695488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 10883323 - 10883244
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| ||||| ||||| |||||||||||||||||  ||||| |||||||||| ||  || || | ||||||||||||||    
T  10883323 gagtagtggaggtagtgattgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaggcatccaatgcctt 10883244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 11792921 - 11792967
Alignment:
Q  8 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 54  Q
    ||||| |||||||||||||||||||||||  ||||| ||||||||||    
T  11792921 tggagatagtggttgtacacttcgtacaattgtactttgtcaacgct 11792967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 12366892 - 12366846
Alignment:
Q  8 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 54  Q
    ||||| ||||||||||| |||||||||||  ||||||||||||||||    
T  12366892 tggaggtagtggttgtatacttcgtacaattgtactatgtcaacgct 12366846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 13260759 - 13260689
Alignment:
Q  8 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 78  Q
    ||||| |||||||||||||||||||||||  ||||||| |||| ||| ||  || || |||||||||||||    
T  13260759 tggagatagtggttgtacacttcgtacaattgtactatctcaatgctcttccaagaacaagcatccaatgc 13260689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 236
Target Start/End: Original strand, 15088707 - 15088773
Alignment:
Q  170 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    |||||||||||||| |  |||||||||||||   || ||| | ||||||||||||||||||||||||    
T  15088707 catctcctgatgaattagagcttctggtgatcttcagcttatgatgaacttgcttctgatgacgtca 15088773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 236
Target Start/End: Original strand, 331831 - 331899
Alignment:
Q  170 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaac--ttgcttctgatgacgtca 236  Q
    |||||||||||| ||| ||||||||||||||   || ||||| ||||||  ||||||||||||||||||    
T  331831 catctcctgatggacttcagcttctggtgatcttcagcttctgatgaacttttgcttctgatgacgtca 331899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 207 - 236
Target Start/End: Original strand, 8183166 - 8183195
Alignment:
Q  207 cttctaatgaacttgcttctgatgacgtca 236  Q
    ||||||||||||||||||||||||||||||    
T  8183166 cttctaatgaacttgcttctgatgacgtca 8183195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 2500243 - 2500291
Alignment:
Q  188 agcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    ||||||||||||| | || ||||| |||||||||||| |||||||||||    
T  2500243 agcttctggtgatcctcagcttctgatgaacttgcttatgatgacgtca 2500291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 30025928 - 30025992
Alignment:
Q  17 tggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||||||||||||||||||  ||||| |||||||||| ||  || || ||||||| ||||||||    
T  30025928 tggttgtacacttcgtacaattgtactttgtcaacgctcttaaaagaacaagcatcgaatgcctt 30025992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 134; Significance: 7e-70; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 3 - 236
Target Start/End: Complemental strand, 46796514 - 46796282
Alignment:
Q  3 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctatac 102  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||| ||||||||||||| |||| ||||  ||||    
T  46796514 agtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagtatctaatgcctttcaaattagccgttgtaatac 46796415  T
Q  103 ttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattc 202  Q
    ||||||||||||||||||| |||| |||||||| |||||   ||||||||||  |||||||  ||| ||||||||||||||||||||||||| |||||||    
T  46796414 ttttccagtcttctgcaatcttagacgagtttgaatcct-ttaaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttcttgtgattc 46796316  T
Q  203 acaacttctaatgaacttgcttctgatgacgtca 236  Q
    ||| ||||| ||||||||||||||||||||||||    
T  46796315 acagcttctgatgaacttgcttctgatgacgtca 46796282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 30054366 - 30054131
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct-ttttgaataataagcatccaatgcctttcaaaatagctgttgcta 99  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||   |||||||| ||||||||||||||| |||  |||||||    
T  30054366 agagtagtggagttagtggttgtacatttcgtacaaacgtactatgtcaacgctcttttgttgaataagcacccaatgcctttcaaagtagtcgttgcta 30054267  T
Q  100 tacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtga 199  Q
    |||||||| ||||||||||||||||||||||||||| || || | ||||| ||||  ||||||||  || ||||||||||||||||| || |||||||||    
T  30054266 tacttttcaagtcttctgcaattttaggcgagtttgaattcttg-aaacagcttttgaagctttgaattgcatctcctgatgaactgaagtttctggtga 30054168  T
Q  200 ttcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  30054167 ttcacagcttctgatgaacttgcttctgatgacgtca 30054131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 21605803 - 21605572
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||| |||||||||||  ||||  ||    
T  21605803 agagtagtggagatagtggttgtacacttcgtacaaacgtattatgtcaacgctctttgaagaataagcatccaatgcatttcaaaatagtcgttgtcat 21605704  T
Q  101 acttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtga 199  Q
    ||||||||||||||||||||||| |||||||||| |  |||| | ||||||||||  |||||||  ||| ||||||||||||||||||| ||||||||||    
T  21605703 acttttccagtcttctgcaatttctaggcgagttagagtccttg-aaacaacttttgaagctttaagttccatctcctgatgaactgcaacttctggtga 21605605  T
Q  200 ttcacaacttctaatgaacttgcttctgatgac 232  Q
    | |||||||||| |||||||||||| |||||||    
T  21605604 tacacaacttctgatgaacttgcttatgatgac 21605572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 14 - 236
Target Start/End: Original strand, 40850991 - 40851213
Alignment:
Q  14 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctatacttttccagtct 113  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||| |||||||||||  ||||| |||||||||||||||    
T  40850991 tagtggttgtacacttcgtacaaacatactatgtcaacgctctttgaagaataagcatccaatgcatttcaaaatagtcgttgccatacttttccagtct 40851090  T
Q  114 tctgcaattt-taggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttcta 212  Q
    |||||||||| |||||||||| |  |||| | || || ||||  |||||||  ||| ||||||||||||||||| ||||||||||||| ||||||||||     
T  40851091 tctgcaatttctaggcgagttagagtccttg-aaccagcttttgaagctttaagttccatctcctgatgaactgtagcttctggtgatacacaacttctg 40851189  T
Q  213 atgaacttgcttctgatgacgtca 236  Q
    ||||||||||||||||||||||||    
T  40851190 atgaacttgcttctgatgacgtca 40851213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 21636819 - 21636588
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| ||||  ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||  ||||| ||    
T  21636819 agagtagtggaagtagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcatttcaaaatagtcgttgccat 21636720  T
Q  101 acttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtga 199  Q
    ||||||||||||||||||||||| |||||||||| |  |||| | ||||| ||||  |||||||  ||| || |||||||||||||||  ||||||||||    
T  21636719 acttttccagtcttctgcaatttctaggcgagttagagtccttg-aaacagcttttgaagctttaagttccaactcctgatgaactgccacttctggtga 21636621  T
Q  200 ttcacaacttctaatgaacttgcttctgatgac 232  Q
    | |||| ||||| ||||||||||||||||||||    
T  21636620 tacacagcttctgatgaacttgcttctgatgac 21636588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 49666554 - 49666325
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataag-catccaatgcctttcaaaatagctgttgcta 99  Q
    |||||| ||||| |||||||||||||||||||||||||||| |||||||| ||| |||||| |||| | | | |||| |||||||||||||  |||| ||    
T  49666554 agagtagtggagatagtggttgtacacttcgtacaaacgtaatatgtcaatgctctttgaagaatatgtctttcaat-cctttcaaaatagtcgttgtta 49666456  T
Q  100 tacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtga 199  Q
    |||||||||||||||||||||| |||| |||||||| ||||| |||| |||||||  |||||||  ||| ||||||||||||||||||||||||||||||    
T  49666455 tacttttccagtcttctgcaatcttagacgagtttgaatccttgaaa-caacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtga 49666357  T
Q  200 ttcacaacttctaatgaacttgcttctgatga 231  Q
    |||||||||| | ||||| |||||||||||||    
T  49666356 ttcacaacttatgatgaaattgcttctgatga 49666325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 14955437 - 14955676
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt---------tcaaaatagc 91  Q
    |||||| ||||| |||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||         |||||||||     
T  14955437 agagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgaagaataagcatccaatgccttcaaatactttcaaaatagt 14955536  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
    ||||||| ||| |||||||||||||||||| ||||| |||||||| |||| |  ||||| ||||  |||||||| ||||||||||||||||||||||| |    
T  14955537 tgttgctttacctttccagtcttctgcaatctttagacgagtttgaatcc-attaaacagcttttgaagctttgagttacatctcctgatgaactgcaac 14955635  T
Q  191 ttctggtgattcacaacttctaatgaacttgcttctgatga 231  Q
    |||||||||||| || ||||| || ||||||||||||||||    
T  14955636 ttctggtgattctcagcttctgataaacttgcttctgatga 14955676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 21640877 - 21641108
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaa---------aatagc 91  Q
    |||||| ||||| |||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||| ||||||         ||||||    
T  21640877 agagtagtggagatagtggttgtacacttcgtaaaaacgtactatgtcaacgctctttgaaaaataagcatccaatgcttttcaatccttccaaaatagc 21640976  T
Q  92 tgttgctatacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagct 191  Q
     |||||||||||||||||||||||| |||| ||||||||||||| ||||| | ||||| ||||  | |||||  ||| ||||||||||||||||||| ||    
T  21640977 cgttgctatacttttccagtcttctacaatcttaggcgagtttgaatccttg-aaacagcttttgaggctttaagttgcatctcctgatgaactgcaact 21641075  T
Q  192 tctggtgattcacaacttctaatgaacttgctt 224  Q
    |||||||||||||| ||||| ||||||||||||    
T  21641076 tctggtgattcacagcttctgatgaacttgctt 21641108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 2785074 - 2785314
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct-ttttgaataataagcatccaatgc---------ctttcaaaatag 90  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||  || |||||||||||||         ||||||||||||    
T  2785074 agagtagtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgctcttttgaggaacaagcatccaatgcgttcaaatcctttcaaaatag 2785173  T
Q  91 ctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcag 189  Q
     |||||||  ||||||||||||||||||||| ||||| |||||||| ||||    ||||||||||  |||||||  ||| |||||||||||||||| ||     
T  2785174 ttgttgcttcacttttccagtcttctgcaatctttagacgagtttgaatcc-gttaaacaacttttgaagctttaagttgcatctcctgatgaactacaa 2785272  T
Q  190 cttctggtgattcacaacttctaatgaacttgcttctgatga 231  Q
    ||||||||||||| || |||||||| ||||||||||||||||    
T  2785273 cttctggtgattctcagcttctaataaacttgcttctgatga 2785314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 1728164 - 1727935
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| || || |||||||||||||||||||||||||| |||||||||| | |  ||||  |||||||||||||||| |||||||||||| |||| ||     
T  1728164 agagtagtgcagatagtggttgtacacttcgtacaaacgcactatgtcaatgttccttgaggaataagcatccaatgcttttcaaaatagccgttgtta- 1728066  T
Q  101 acttttccagtcttctgcaatttt-aggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtga 199  Q
    ||||| | |||||| |||||||||  |||||| ||| ||||| | ||||||||||  || || |  |||  |||||||||||||||||||||||||||||    
T  1728065 actttccaagtcttttgcaattttctggcgagattgaatccttg-aaacaacttttgaaactataagttcaatctcctgatgaactgcagcttctggtga 1727967  T
Q  200 ttcacaacttctaatgaacttgcttctgatga 231  Q
    | |||| ||||| |||||||||||| ||||||    
T  1727966 tacacagcttctgatgaacttgcttttgatga 1727935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 5213587 - 5213789
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagc 91  Q
    |||||| ||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||         |||| ||||||||     
T  5213587 agagtagtggaggtagtggttgtacacttcgtacaaacgtactacgtcaacgc-ttttgaataataagcatctaatgccttcaaatccttccaaaatagt 5213685  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
    |||||||||||||||||||||||||||||| ||||  |||||||| ||||    ||||| ||||  |||||||  ||| |||||||||||||||| ||||    
T  5213686 tgttgctatacttttccagtcttctgcaatctttatacgagtttgaatcc-gttaaacagcttttgaagctttaagttgcatctcctgatgaactacagc 5213784  T
Q  191 ttctg 195  Q
    |||||    
T  5213785 ttctg 5213789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 201
Target Start/End: Complemental strand, 20627578 - 20627371
Alignment:
Q  3 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcct---------ttcaaaatagctg 93  Q
    |||| ||||| |||||||||||||||||||||||||||||| |||||||||| |||||  || |||||||||||||||         |||||||||| ||    
T  20627578 agtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgataaacaagcatccaatgccttcaaatccattcaaaatagttg 20627479  T
Q  94 ttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagctt 192  Q
    |||||  |||||||||||||||||||||  |||| |||||||| |||| |  ||||| ||||  |||||||  ||| ||||||||||||||||||| |||    
T  20627478 ttgcttcacttttccagtcttctgcaatcattagacgagtttgaatcc-attaaacatcttttgaagctttaagttgcatctcctgatgaactgcaactt 20627380  T
Q  193 ctggtgatt 201  Q
    |||||||||    
T  20627379 ctggtgatt 20627371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 24775683 - 24775442
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagc 91  Q
    |||||| ||||  |||||||||||||||||||||||||||||| |||||| ||| |||||| ||||||||| |||||         |||||||||||||     
T  24775683 agagtagtggatgtagtggttgtacacttcgtacaaacgtactttgtcaaagctctttgaagaataagcattcaatgccttcaaatcctttcaaaatagt 24775584  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaact--gca 188  Q
    |||||||  ||||||||||||||||||||| ||||| |||||||| ||||    ||||| ||||  |||||||  ||| ||||||||||||||||  |||    
T  24775583 tgttgcttcacttttccagtcttctgcaatctttagacgagtttgaatcc-gttaaacagcttttgaagctttaagttgcatctcctgatgaactgcgca 24775485  T
Q  189 gcttctggtgattcacaacttctaatgaacttgcttctgatga 231  Q
    |||||||||||||| || ||| | || |||||| |||||||||    
T  24775484 gcttctggtgattctcagcttgtgataaacttggttctgatga 24775442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 9700185 - 9699989
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| || || |||||||| ||||||||||||||||| ||||||||||||||  ||||  |||||||||||||||| |||||||||||  |||| ||     
T  9700185 agagtagtgcagatagtggttatacacttcgtacaaacgcactatgtcaacgctccttgaggaataagcatccaatgcttttcaaaatagtcgttgtta- 9700087  T
Q  101 acttttccagtcttctgcaatttt-aggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtga 199  Q
    ||||| | ||||||||||||||||  |||||| ||| ||||| | ||||||||||  ||||||| ||||  |||| ||||||| ||||||||||||||||    
T  9700086 actttccaagtcttctgcaattttctggcgagcttgaatccttg-aaacaacttttgaagctttaggtt-gatcttctgatgatctgcagcttctggtga 9699989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 47207716 - 47207964
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcc---------tttcaaaatagc 91  Q
    |||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| |||||| || ||||||||||||||         ||||||| ||||    
T  47207716 agagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcatttcaaactagc 47207815  T
Q  92 tgttgctatacttttccagtcttctgcaat--tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcag 189  Q
     ||||||  |||||||||||||||||||||  ||||| |||| ||  |||| |   |||||| ||  ||| |||  ||| ||||||||||||||||||||    
T  47207816 cgttgcttcacttttccagtcttctgcaatgctttagacgagattaaatcc-attgaacaacctttgaagttttatgttgcatctcctgatgaactgcag 47207914  T
Q  190 cttctggtgattcacaacttctaatgaactt--gcttctgatgacgtcac 237  Q
    ||||||||||||  || ||||| ||||| ||  |||||||||||||||||    
T  47207915 cttctggtgattttcagcttctgatgaagttcagcttctgatgacgtcac 47207964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 29855419 - 29855499
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||    
T  29855419 agagtagtggaggtagtggttgtacacttcgtacaaacgtactctgtcaacgctttttgaagaacaagcatccaatgcctt 29855499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 11223573 - 11223818
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagc 91  Q
    |||||| ||||| ||||||||||||||||||||||||| |||| |||||||||| |||||| || ||||||||||||         |||||||||||||     
T  11223573 agagtagtggagatagtggttgtacacttcgtacaaacatactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaaatagt 11223672  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
     ||||||  |||||| ||||||||||||||   ||| |||| ||| | || |   |||| ||||  |||||    |||  ||||||||||||||||| ||    
T  11223673 cgttgcttcactttttcagtcttctgcaatgcatagacgagattg-aacccattgaacagcttttgaagctcaaagttgtatctcctgatgaactgctgc 11223771  T
Q  191 ttctggtgattcacaacttctaatgaacttgcttctgatgacgtcac 237  Q
    |||||||||||  ||  |||| |||||||||||||||||||||||||    
T  11223772 ttctggtgattttcagattctgatgaacttgcttctgatgacgtcac 11223818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 14969344 - 14969466
Alignment:
Q  8 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagctgttgct 98  Q
    ||||| |||||||||||||||||||| ||| ||||| |||||||||| |||||| |||||||||||||||         ||||||||||||| |||||||    
T  14969344 tggagatagtggttgtacacttcgtaaaaatgtactttgtcaacgctatttgaagaataagcatccaatgccatcaaatcctttcaaaatagttgttgct 14969443  T
Q  99 atacttttccagtcttctgcaat 121  Q
     |||| |||||||||||||||||    
T  14969444 ttactcttccagtcttctgcaat 14969466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 33583239 - 33583480
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct-ttttgaataataagcatccaatg---------cctttcaaaatag 90  Q
    |||||| ||||| |||||||||||||||||||||||||||||| |||||||||| ||||||  || ||||||||||||         |||||||||||||    
T  33583239 agagtattggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctcttttgaggaacaagcatccaatgcgttcaaatcctttcaaaatag 33583338  T
Q  91 ctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcag 189  Q
    | ||||||  |||||||||||||||| ||||  |||| | || ||| |||| | |||||||||||  |||| ||  ||| ||||  |||||||||| ||     
T  33583339 ccgttgcttcacttttccagtcttctacaatccttagacaaggttgaatcccataaaacaacttttgaagccttaagttgcatcctctgatgaactacaa 33583438  T
Q  190 cttctggtgattcacaacttctaatgaacttgcttctgatga 231  Q
    ||| ||||||||   | ||||| ||  |||||||||||||||    
T  33583439 cttttggtgatttttagcttctgatagacttgcttctgatga 33583480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 53056876 - 53056747
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagc 91  Q
    |||||| ||||| |||||||||||||||||||||||||||||| ||| |||||| |||||| || ||||||||||||         |||||||||||||     
T  53056876 agagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtaaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaaatagt 53056777  T
Q  92 tgttgctatacttttccagtcttctgcaat 121  Q
     ||||||  |||||||||||||||||||||    
T  53056776 cgttgcttcacttttccagtcttctgcaat 53056747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 2561198 - 2561445
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagc 91  Q
    |||||| ||||| ||||||||||||||||||||||   ||||| |||||||| | |||||| || |||||||||||          |||||||||||||     
T  2561198 agagtagtggaggtagtggttgtacacttcgtacacttgtactttgtcaacgatctttgaagaacaagcatccaatttcttcaaatcctttcaaaatagt 2561297  T
Q  92 tgttgctatacttttccagtcttctgcaatt-ttaggcgagtttgtatcctagaaaacaactttcaaagctttgggt--tacatctcctgatgaactgca 188  Q
    |||||||  ||| |||||||||||||||||  |||| |||| ||  |||| |   |||||| ||  |||||||  ||  | ||||||||||||||||  |    
T  2561298 tgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatcc-attgaacaacctttgaagctttaagtcttgcatctcctgatgaactaga 2561396  T
Q  189 gcttctggtgattcacaacttctaatgaacttgcttctgatgacgtcac 237  Q
    |||||||||||||| || ||||| ||||||||||||||||||| |||||    
T  2561397 gcttctggtgattctcagcttctgatgaacttgcttctgatgatgtcac 2561445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 22140774 - 22140850
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg 77  Q
    |||||| ||||| |||||||| ||||||||||||| |||||||||||||||||| |||||| || ||||||||||||    
T  22140774 agagtagtggaggtagtggttatacacttcgtacatacgtactatgtcaacgctctttgaagaacaagcatccaatg 22140850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 231
Target Start/End: Complemental strand, 46349979 - 46349754
Alignment:
Q  15 agtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt---------tcaaaatagctgttgctatacttt 105  Q
    |||||||||||||||||||||| |||||| |||||| | | | |||| || ||||||||||||||||         ||||| |||  ||||||  |||||    
T  46349979 agtggttgtacacttcgtacaatcgtactttgtcaatgttctctgaagaacaagcatccaatgccttcaaatcctttcaaattagtcgttgcttcacttt 46349880  T
Q  106 tccagtcttctgcaatt-ttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattcac 204  Q
    ||||||||||||||||  |||| |||| ||| |||  |   |||||||||  |||  ||  ||| | ||||||||||||||||| ||||||||||||  |    
T  46349879 tccagtcttctgcaatgcttagacgagattggatca-attgaacaacttttgaagtcttaagttgcttctcctgatgaactgcaacttctggtgattttc 46349781  T
Q  205 aacttctaatgaacttgcttctgatga 231  Q
    | |||||||||||||||||||||||||    
T  46349780 agcttctaatgaacttgcttctgatga 46349754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 38177792 - 38177712
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||| || || ||||||||||||||||    
T  38177792 agagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttaaagaacaagcatccaatgcctt 38177712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 13948347 - 13948426
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||||||||| || ||||||||||||||||||||  |||||||||||||||| ||  || || ||||||||||||||||    
T  13948347 gagtaatggagataatggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgcctt 13948426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 11909171 - 11909093
Alignment:
Q  3 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||| ||||| ||||||| |||||||||||| | ||||||| |||||||||| ||||||  ||||||||||||||||||    
T  11909171 agtagtggaggtagtggtcgtacacttcgtaaagacgtactttgtcaacgctctttgaaggataagcatccaatgcctt 11909093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 13780726 - 13780653
Alignment:
Q  8 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  ||||| ||||||||||||||||    
T  13780726 tggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaataacaagcatccaatgcctt 13780653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 236
Target Start/End: Original strand, 15833566 - 15833643
Alignment:
Q  160 ctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaac-ttgcttctgatgacgtca 236  Q
    |||| |||| ||||| ||||||||||| ||||||||||||| |||| ||||| |||||| ||||||||||||||||||    
T  15833566 ctttaggttgcatcttctgatgaactgtagcttctggtgatacacagcttctgatgaactttgcttctgatgacgtca 15833643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 18121771 - 18121690
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgccttt 82  Q
    |||||| ||||| |||||||||||||||||||||||  ||||| ||| |||||| |||||| || |||||| ||||||||||    
T  18121771 agagtagtggaggtagtggttgtacacttcgtacaattgtactttgtaaacgctctttgaagaaaaagcattcaatgccttt 18121690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 18142901 - 18142820
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgccttt 82  Q
    |||||| ||||| |||||||||||||||||||||||  ||||| ||| |||||| |||||| || |||||| ||||||||||    
T  18142901 agagtagtggaggtagtggttgtacacttcgtacaattgtactttgtaaacgctctttgaagaaaaagcattcaatgccttt 18142820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 28582117 - 28582194
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcc 79  Q
    ||||| ||||| |||||||||||||||||||||||  ||| | |||||||||| |||||| || ||||||||||||||    
T  28582117 gagtagtggaggtagtggttgtacacttcgtacaattgtattttgtcaacgctctttgaagaacaagcatccaatgcc 28582194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 6090742 - 6090822
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||| |||||||||||||||||||||||  ||||| |||||| ||||||| || || |||||| |||||||||    
T  6090742 agagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaaagctttttaaagaacaagcattcaatgcctt 6090822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 20646165 - 20646241
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 78  Q
    ||||| ||||| |||||||||||||||||||||||  |||||||||||||||| ||  || || |||||||||||||    
T  20646165 gagtagtggaggtagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgc 20646241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 40799884 - 40799964
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| |||||| || ||| ||||||| ||||    
T  40799884 agagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagtatccaattcctt 40799964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 49553638 - 49553558
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| | |||| || || |||||||||||||    
T  49553638 agagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctctgaagaacaaacatccaatgcctt 49553558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 11868279 - 11868338
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttga 60  Q
    |||||| ||||| ||||||||||||||||||||||| |||||| |||||||||| |||||    
T  11868279 agagtagtggaggtagtggttgtacacttcgtacaatcgtactttgtcaacgctctttga 11868338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 237
Target Start/End: Original strand, 11869256 - 11869323
Alignment:
Q  170 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtcac 237  Q
    |||| |||||||||||||||||||||||||||  || ||||| ||||| |||||||||||||| ||||    
T  11869256 catcccctgatgaactgcagcttctggtgattttcagcttctgatgaaattgcttctgatgacatcac 11869323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 13824092 - 13824159
Alignment:
Q  14 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||||||||||||||||||||  ||||| |||||||||| |||||| || || |||||||||||||    
T  13824092 tagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaaacatccaatgcctt 13824159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 16658765 - 16658690
Alignment:
Q  3 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 78  Q
    |||| ||||| |||||||||||||||||||||||  ||| |||||||||||| ||  || ||||||||||||||||    
T  16658765 agtagtggaggtagtggttgtacacttcgtacaattgtattatgtcaacgctcttcaaagaataagcatccaatgc 16658690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 41495010 - 41495089
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || || ||||||||||||||||    
T  41495010 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 41495089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 236
Target Start/End: Original strand, 10529506 - 10529583
Alignment:
Q  160 ctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaac-ttgcttctgatgacgtca 236  Q
    |||| |||| ||||| ||||||| ||| ||||||||||||| |||| ||||| |||||| ||||||||||||||||||    
T  10529506 ctttaggttgcatcttctgatgagctgtagcttctggtgatacacagcttctgatgaactttgcttctgatgacgtca 10529583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 12963233 - 12963149
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaa 87  Q
    ||||| ||||| |||||||||||||||||||||||  ||||||||||||| || ||  || || |||||||||||| |||||||||    
T  12963233 gagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacactcttcaaagaacaagcatccaatg-ctttcaaaa 12963149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 37412615 - 37412759
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| ||||| ||||||||||||| |||||||||||| || |||||||| ||  |  |  | |||||||||||||| |||||||||||| ||||| |     
T  37412615 agagtagtggagatagtggttgtacatttcgtacaaacgcacaatgtcaactctcctataggattaagcatccaatgcttttcaaaatagccgttgc-aa 37412713  T
Q  101 acttttccagtcttctgcaattttaggcgagtttgtatcctagaaa 146  Q
    ||||| | ||  |||||||| || ||||||| ||| ||||| ||||    
T  37412714 actttccaagatttctgcaacttcaggcgagcttgaatccttgaaa 37412759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 37467350 - 37467423
Alignment:
Q  8 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || || ||||||||||||||||    
T  37467350 tggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 37467423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 45858875 - 45858818
Alignment:
Q  24 acacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||||||||| ||||||| |||||||||| ||||||  ||||||||||||||||||    
T  45858875 acacttcgtacagacgtactttgtcaacgctctttgaaggataagcatccaatgcctt 45858818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 16032535 - 16032615
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||| |||||||||||||||||||||||  ||||| |||||| ||| ||  || || ||||||||||||||||    
T  16032535 agagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaatgctcttcaaagaacaagcatccaatgcctt 16032615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 50300246 - 50300286
Alignment:
Q  14 tagtggttgtacacttcgtacaaacgtactatgtcaacgct 54  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  50300246 tagtggttgtacacttcgtacaaacgtactttgtcaacgct 50300286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 14393151 - 14393076
Alignment:
Q  3 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 78  Q
    |||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || || |||||||||||||    
T  14393151 agtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgc 14393076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 47405568 - 47405490
Alignment:
Q  3 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||| ||||| |||||||||||||||||||||||  ||||| ||||||| || |||||| || || |||| ||||||||    
T  47405568 agtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacactctttgaagaacaaacatcaaatgcctt 47405490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 28582296 - 28582357
Alignment:
Q  170 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatga 231  Q
    |||||||||||||| |  ||||||||||||||  || ||||||||| |||||||||||||||    
T  28582296 catctcctgatgaaatagagcttctggtgattttcagcttctaatgtacttgcttctgatga 28582357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 12389021 - 12388941
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||| |||||||||||||||||||||||  || || || ||||||| ||  || || ||||||||||||||||    
T  12389021 agagtagtggaggtagtggttgtacacttcgtacaattgtcctttgccaacgctcttcaaagaagaagcatccaatgcctt 12388941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 25398404 - 25398344
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaa 61  Q
    |||||| ||||| |||||||||||||||||||||||  || || |||||||||| ||||||    
T  25398404 agagtagtggaggtagtggttgtacacttcgtacaattgtgctttgtcaacgctctttgaa 25398344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 17239069 - 17239018
Alignment:
Q  3 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 54  Q
    |||| ||||| |||||||||||||||||||||||  ||||| ||||||||||    
T  17239069 agtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgct 17239018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 49642910 - 49642831
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| ||||| |||||||||||||||| ||||||  ||||| |||||||||| ||  || || || |||||||||||||    
T  49642910 gagtagtggagatagtggttgtacactttgtacaattgtactttgtcaacgctcttaaaagaacaatcatccaatgcctt 49642831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 231
Target Start/End: Original strand, 50300396 - 50300451
Alignment:
Q  176 ctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatga 231  Q
    ||||||||||||||||||||||||||   ||||| | || ||||||||||||||||    
T  50300396 ctgatgaactgcagcttctggtgatttttaacttatgataaacttgcttctgatga 50300451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 12726379 - 12726302
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 78  Q
    |||||| ||||| |||||||||||||||| ||||||  ||||| ||| ||| || ||| || | ||||||||||||||    
T  12726379 agagtagtggaggtagtggttgtacactttgtacaattgtactttgttaactctctttaaagagtaagcatccaatgc 12726302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 22804171 - 22804119
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 54  Q
    ||||| ||||| |||||||| ||||||||||||||  ||||| ||||||||||    
T  22804171 gagtagtggagatagtggttttacacttcgtacaattgtactttgtcaacgct 22804119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 31303397 - 31303449
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 54  Q
    ||||| ||||| |||| ||||||||||||||||||  ||||| ||||||||||    
T  31303397 gagtagtggagatagttgttgtacacttcgtacaattgtactttgtcaacgct 31303449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 47405405 - 47405361
Alignment:
Q  157 aagctttgggttacatctcctgatgaactgcagcttctggtgatt 201  Q
    |||||||  ||| |||||| |||||||||||||||||||||||||    
T  47405405 aagctttatgttgcatctcgtgatgaactgcagcttctggtgatt 47405361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 17865 - 17631
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| ||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||  ||||||||    
T  17865 agagtagtggagatagtggttgtacacttcatacaaacgtactatgtcaacgctctttgaaggataagcatccaatgcctttcaaaatagacgttgctat 17766  T
Q  101 acttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgat 200  Q
    ||||||  ||||||||||||| |||| |||||||| ||||| | ||||| ||||  |||||||  |||  ||||||||||||| || |||||||||||||    
T  17765 acttttgtagtcttctgcaatcttagacgagtttgaatccttg-aaacagcttttgaagctttaagttgtatctcctgatgaattgaagcttctggtgat 17667  T
Q  201 tcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    ||||| ||||| ||||||||||||||||||||||||    
T  17666 tcacagcttctgatgaacttgcttctgatgacgtca 17631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 125; Significance: 2e-64; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 19066156 - 19065921
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| ||||  ||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||| |||||||||||| ||||| ||    
T  19066156 agagtagtggaagtagtggttgtacacttcgtacaaacatactatgtcaacgctctttgaagaataagcatccaatgcatttcaaaatagccgttgccat 19066057  T
Q  101 acttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtga 199  Q
    ||||||||||||||||||||||| |||||||||| |  |||| | ||||| ||||  |||||||  | | ||||||||||||||||||||||||||||||    
T  19066056 acttttccagtcttctgcaatttctaggcgagttagagtccttg-aaacagcttttgaagctttaagatccatctcctgatgaactgcagcttctggtga 19065958  T
Q  200 ttcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    |  ||| ||||| ||||||||||||||||||||||||    
T  19065957 tatacagcttctgatgaacttgcttctgatgacgtca 19065921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 22076545 - 22076305
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc---------ctttcaaaatagc 91  Q
    |||||| ||||| |||||||||||||||||||||||| |||||||||||||||| |||||| |||||||||| |||||         ||| ||||||||     
T  22076545 agagtagtggagatagtggttgtacacttcgtacaaatgtactatgtcaacgctctttgaagaataagcatcaaatgctttccaatccttccaaaatagt 22076446  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
     ||||||||||||||| ||||||||||||| ||||| |||||||  |||||  ||| || |||| ||||||||  ||| |||||||||||||||| || |    
T  22076445 cgttgctatacttttcgagtcttctgcaatctttagacgagtttaaatcctttaaa-cagcttttaaagctttaagttgcatctcctgatgaactacatc 22076347  T
Q  191 ttctggtgattcacaacttctaatgaacttgcttctgatgac 232  Q
    ||||||||||||||| ||||| ||||||||||||||||||||    
T  22076346 ttctggtgattcacagcttctgatgaacttgcttctgatgac 22076305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 12349004 - 12349211
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagc 91  Q
    |||||| ||||| |||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||         |||||||||||||     
T  12349004 agagtagtggagatagtggttgtacactttgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaatcctttcaaaatagt 12349103  T
Q  92 tgttgctatacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagct 191  Q
     ||||||||||||||||||||||||||||| |||| |||||||| ||||| | ||||| ||||  ||||| |  ||| ||||||||||||||||||||||    
T  12349104 cgttgctatacttttccagtcttctgcaatcttagacgagtttgaatccttg-aaacagcttttgaagctctaagttgcatctcctgatgaactgcagct 12349202  T
Q  192 tctggtgat 200  Q
    |||| ||||    
T  12349203 tctgatgat 12349211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 21618255 - 21618494
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagc 91  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||         |||| ||||||||     
T  21618255 agagtagtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttcaaatccttccaaaatagt 21618354  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
     |||||| ||||||||||||||||| |||| |||||  ||||||| ||||    ||||||||||  |||||||  ||| ||||| |||||||||| ||||    
T  21618355 cgttgctttacttttccagtcttctacaatctttagaagagtttgaatcc-gttaaacaacttttgaagctttaagttgcatcttctgatgaactacagc 21618453  T
Q  191 ttctggtgattcacaacttctaatgaacttgcttctgatga 231  Q
    |||||||||||| || ||||| || ||||||||||||||||    
T  21618454 ttctggtgattctcagcttctgataaacttgcttctgatga 21618494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 33352064 - 33351827
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagc 91  Q
    |||||| ||||| ||||| ||||||||||||||||||||||||||||||||||| || ||| ||||| |||||||||         ||||||||||||||    
T  33352064 agagtagtggagatagtgattgtacacttcgtacaaacgtactatgtcaacgctctt-gaagaataaacatccaatgtttttcaatcctttcaaaatagc 33351966  T
Q  92 tgttgctatacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagct 191  Q
      |||||||||||||||||||||||||| | |||| ||||| || ||||| |||| || ||||  | |||||  ||| ||||||| |||||| ||||| |    
T  33351965 c-ttgctatacttttccagtcttctgcactcttagacgagtgtgaatccttgaaa-cagcttttgaggctttaagttgcatctcccgatgaaatgcagtt 33351868  T
Q  192 tctggtgattcacaacttctaatgaacttgcttctgatgac 232  Q
    |||||||||||||| ||||| ||||||||||||||||||||    
T  33351867 tctggtgattcacagcttctgatgaacttgcttctgatgac 33351827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 16877224 - 16877468
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt---------tcaaaatagc 91  Q
    |||||| ||||| |||||||||||||||||||||||||||||| |||||||||| |||||  ||| |||||||||| ||||         | || ||||     
T  16877224 agagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgaggaattagcatccaattccttcaaatccttttaagatagt 16877323  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
     ||||||  |||||  |||||||||||||| ||||| |||||||| |||| |  ||||||||||  |||||||  ||| |||||||||||||||| || |    
T  16877324 cgttgcttcactttctcagtcttctgcaatctttagacgagtttgaatcc-attaaacaacttttgaagctttaagttgcatctcctgatgaactacaac 16877422  T
Q  191 ttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    || |||||||||||| ||||| ||||||||||||||||||||||||    
T  16877423 ttttggtgattcacagcttctgatgaacttgcttctgatgacgtca 16877468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 15954714 - 15954959
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagc 91  Q
    |||||| ||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||| |||||         ||||||||| |||     
T  15954714 agagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgaataacaagcattcaatgccttcaaatcctttcaaattagt 15954813  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
     ||||||  | ||||||||||||||||||| |||||  ||||||| ||||    ||||| ||||  |||||||  ||| |||||| ||||||||| ||||    
T  15954814 cgttgcttcatttttccagtcttctgcaatctttagaagagtttgaatcc-gttaaacagcttttgaagctttaagttgcatctcttgatgaactacagc 15954912  T
Q  191 ttctggtgattcacaacttctaatgaacttgcttctgatgacgtcac 237  Q
    ||||||| |||| || ||||| || ||||||||||||||||||||||    
T  15954913 ttctggtaattctcagcttctgataaacttgcttctgatgacgtcac 15954959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 16336138 - 16336366
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagc 91  Q
    |||||| || || ||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||| |||||         |||| ||||||||     
T  16336138 agagtagtgtagatagtggttgtacacttcgtacaatcgtactatgtcaacgctctttgaagaataagcattcaatgccttctaatccttccaaaatagt 16336237  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
     ||||||||||||||||||||||||||||| ||||| |||||||| |||||   ||||||||||  ||||||   ||| ||||||||||||| || || |    
T  16336238 cgttgctatacttttccagtcttctgcaatgtttagacgagtttgaatcct-ttaaacaacttttgaagcttcaagttgcatctcctgatgatctacaac 16336336  T
Q  191 ttctggtgattcacaacttctaatgaactt 220  Q
    |||||||||||| || ||||| || |||||    
T  16336337 ttctggtgattctcagcttctgataaactt 16336366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 26589610 - 26589844
Alignment:
Q  1 agagtaatggagttagtggttgtacactt-cgtacaaacgtactatgtcaacgctttttgaata--ataagcatccaatgcctttcaaaatagctgttgc 97  Q
    |||||| ||||  |||||||||||||||| |||||| |||||||||||||||||| |||||| |  || |||||||||||| ||||||| ||||||||||    
T  26589610 agagtagtggaagtagtggttgtacactttcgtacagacgtactatgtcaacgctctttgaaaatcattagcatccaatgcatttcaaactagctgttgc 26589709  T
Q  98 tatacttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctgg 196  Q
     | ||| ||| ||||||||| ||||| |||||||||| |  || | | ||||||||||  ||   ||| ||| |||||| ||||||||||||||||||||    
T  26589710 cacactcttctagtcttctgtaatttctaggcgagttagagtcattg-aaacaacttttgaaaacttgagttccatctcttgatgaactgcagcttctgg 26589808  T
Q  197 tgattcacaacttctaatgaacttgcttctgatgac 232  Q
    |||| || | ||||  ||||||||||||||||||||    
T  26589809 tgatacatagcttcagatgaacttgcttctgatgac 26589844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 12423272 - 12423420
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagc 91  Q
    |||||| ||||| |||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||| |||||         |||||||||||||     
T  12423272 agagtagtggagatagtggttgtacacttcgtacaaaggtactatgtcaacgctctttgaagaataagcatacaatgccttccaatcctttcaaaatagt 12423371  T
Q  92 tgttgctatacttttccagtcttctgcaattttaggcgagtttgtatcc 140  Q
     ||||||||||||||||||||||||||| | |||| |||||||| ||||    
T  12423372 cgttgctatacttttccagtcttctgcattcttagacgagtttgaatcc 12423420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 17316650 - 17316467
Alignment:
Q  14 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctatacttttccagtct 113  Q
    |||||||||||||||||||||||||| ||||||||||||||  ||||  ||||||||||| |||| |||||||||||| | || || ||||| | |||||    
T  17316650 tagtggttgtacacttcgtacaaacgcactatgtcaacgctccttgaggaataagcatccgatgcttttcaaaatagccgctgtta-actttccaagtct 17316552  T
Q  114 tctgcaa-ttttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtga 199  Q
    ||||||| |||| |||||| ||| ||||| | ||||||||||  ||||||| ||||  |||| ||||||| ||||||||||||||||    
T  17316551 tctgcaattttttggcgagcttgaatccttg-aaacaacttttgaagctttaggtt-gatcttctgatgatctgcagcttctggtga 17316467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 19833171 - 19832938
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct-ttttgaataataagcatccaatg---------cctttcaaaatag 90  Q
    |||||| ||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||  || ||||||||||||         |||||||||||||    
T  19833171 agagtagtggaggtagtgcttgtacacttcgtacaaacgtactatgtcaacgctcttttgaggaacaagcatccaatgcgttcaaatcctttcaaaatag 19833072  T
Q  91 ctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcag 189  Q
      ||||||  ||||||||||||||||||||| |||||  ||||||| ||||    ||||| |||| ||||||||  ||| |||||||||||||||| ||     
T  19833071 tcgttgcttcacttttccagtcttctgcaatctttagatgagtttgaatcc-gttaaacagcttttaaagctttaagttgcatctcctgatgaactacat 19832973  T
Q  190 cttctggtgattcacaacttctaatgaacttgctt 224  Q
    ||||||||||||| || ||||| || | |||||||    
T  19832972 cttctggtgattctcagcttctgataatcttgctt 19832938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 20488056 - 20487818
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagc 91  Q
    |||||| ||||| ||||||||||| |||||||||||||||||| |||||||||| |||||| || ||||||||||||         ||||||||||||||    
T  20488056 agagtagtggaggtagtggttgtaaacttcgtacaaacgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaaatagc 20487957  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
     ||||||  |||||| |||||||||||||| ||||| |||| ||| | || |  ||||||||||  |||| ||  ||| ||||  ||||||||||||| |    
T  20487956 cgttgcttcacttttacagtcttctgcaatctttagacgaggttgaaccccattaaacaacttttgaagccttaagttgcatcctctgatgaactgcaac 20487857  T
Q  191 ttctggtgattcacaacttctaatgaacttgcttctgat 229  Q
    |||| ||||||   | ||||| || ||||||||||||||    
T  20487856 ttctagtgatttttagcttctgataaacttgcttctgat 20487818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 19482763 - 19482858
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttg 96  Q
    |||||| || || |||||||||||||||||||||||||| ||||||||||||||  ||||  |||||||||||||||| ||||||||||| |||||    
T  19482763 agagtagtgcagatagtggttgtacacttcgtacaaacgcactatgtcaacgctccttgaggaataagcatccaatgcttttcaaaatagatgttg 19482858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 19086170 - 19086288
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctata 101  Q
    ||||| ||||| |||||||||||||||||||||||  |||||||||||||||| ||  || || |||||||||||| ||||||||||||  ||||||  |    
T  19086170 gagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatg-ctttcaaaatagtcgttgcttca 19086268  T
Q  102 cttttccagtcttctgcaat 121  Q
    || | |||||||||||||||    
T  19086269 ctctcccagtcttctgcaat 19086288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 8 - 237
Target Start/End: Complemental strand, 20730835 - 20730597
Alignment:
Q  8 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt---------tcaaaatagctgttgct 98  Q
    ||||| |||||||||||||||| ||||||  ||||| |||||||||| |||||| || || |||||||||||||         ||||| |||  ||||||    
T  20730835 tggaggtagtggttgtacactttgtacaattgtactttgtcaacgctctttgaagaacaaacatccaatgccttcaaatcctttcaaactagtcgttgct 20730736  T
Q  99 atacttttccagtcttctgcaatt-ttaggcgagtttgtatcc-tagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctgg 196  Q
      |||||||||||||||||||||  ||||  ||| ||  |||| | |||  || | ||  |||||||  ||||||||||||||||||||||||||||| |    
T  20730735 tcacttttccagtcttctgcaatacttagatgagattaaatcccttgaa--cagcctttgaagctttttgttacatctcctgatgaactgcagcttctag 20730638  T
Q  197 tgattcacaacttctaatgaacttgcttctgatgacgtcac 237  Q
    |||||  || ||| | |||||||||||||||||||||||||    
T  20730637 tgattttcagcttatgatgaacttgcttctgatgacgtcac 20730597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 146 - 235
Target Start/End: Original strand, 21235278 - 21235367
Alignment:
Q  146 aacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtc 235  Q
    |||||| || ||||||||  ||| ||||||||||||||||||||||||| ||||||  || ||||| |||||||||||||||||||||||    
T  21235278 aacaacctttaaagctttatgttgcatctcctgatgaactgcagcttctagtgattttcagcttctgatgaacttgcttctgatgacgtc 21235367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 32544276 - 32544357
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgccttt 82  Q
    |||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| |||||| ||||| ||||||||||||||    
T  32544276 agagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaataaacatccaatgccttt 32544357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 9717854 - 9717935
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgccttt 82  Q
    |||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| |||||| || ||||||| |||||||||    
T  9717854 agagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatcaaatgccttt 9717935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 22802152 - 22802233
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgccttt 82  Q
    |||||| ||||| |||||||||||||||||||||||  ||||| ||| |||||| |||||| || |||||||||||||||||    
T  22802152 agagtagtggaggtagtggttgtacacttcgtacaattgtactttgttaacgctctttgaagaacaagcatccaatgccttt 22802233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 15531762 - 15531682
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||| |||||||||||| ||||||||||  ||||| |||||||||| |||||| || ||||||||||||||||    
T  15531762 agagtagtggaggtagtggttgtacgcttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgcctt 15531682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 170 - 236
Target Start/End: Complemental strand, 34451626 - 34451563
Alignment:
Q  170 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    ||||||||||||||||  |||||||||||||   |||||||||||||||||||||||||||||||||    
T  34451626 catctcctgatgaactagagcttctggtgat---caacttctaatgaacttgcttctgatgacgtca 34451563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 15987245 - 15987324
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||||||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || || ||||||||||||||||    
T  15987245 gagtaatggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 15987324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 16265123 - 16265045
Alignment:
Q  157 aagctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtc 235  Q
    |||||||  ||| |||||| ||| |||||||||||||||||||||  || ||||| |||||||||||||||||||||||    
T  16265123 aagctttatgttgcatctcttgacgaactgcagcttctggtgattttcagcttctgatgaacttgcttctgatgacgtc 16265045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 14100578 - 14100498
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||| |||||||||||||||||||| ||  ||||| |||||||||| ||| || || ||||||||||||||||    
T  14100578 agagtagtggaggtagtggttgtacacttcgtataattgtactttgtcaacgctctttaaagaagaagcatccaatgcctt 14100498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 15302212 - 15302340
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagct 92  Q
    ||||| ||||| |||||||||||||||| ||||||  |||| ||||||||||| ||  || || ||||||||||||         ||||||||||||||     
T  15302212 gagtagtggagatagtggttgtacactttgtacaattgtacaatgtcaacgctcttcaaagaacaagcatccaatgcctttaaatcctttcaaaatagcc 15302311  T
Q  93 gttgctatacttttccagtcttctgcaat 121  Q
    ||||||  |||||||||||||||||||||    
T  15302312 gttgcttcacttttccagtcttctgcaat 15302340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 21235136 - 21235216
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||| ||||||||||||||||| |||||  ||||| |||||||||| |||||| || ||||||| ||||||||    
T  21235136 agagtagtggaggtagtggttgtacacttcatacaattgtactttgtcaacgctctttgaagaacaagcatcgaatgcctt 21235216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 237
Target Start/End: Original strand, 22802317 - 22802397
Alignment:
Q  157 aagctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtcac 237  Q
    |||||||  ||| |||||||||||||||| || ||||||||||||  || ||||| |||||||||||||| ||||||||||    
T  22802317 aagctttatgttgcatctcctgatgaactacaacttctggtgattttcagcttctgatgaacttgcttctaatgacgtcac 22802397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 24116840 - 24116916
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 78  Q
    ||||| ||||| |||||||||||||||||||||||  |||||||||||||||| ||  || || |||||||||||||    
T  24116840 gagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgc 24116916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 29918028 - 29918108
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| |||||| || |||||||  |||||||    
T  29918028 agagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatctgatgcctt 29918108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 236
Target Start/End: Complemental strand, 17608288 - 17608217
Alignment:
Q  165 ggttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    |||| ||||| ||||||||||  |||||||||||||  ||| ||||| ||||||||||||||||||||||||    
T  17608288 ggttgcatcttctgatgaactatagcttctggtgatatacagcttctgatgaacttgcttctgatgacgtca 17608217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 231
Target Start/End: Original strand, 22386965 - 22387036
Alignment:
Q  160 ctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatga 231  Q
    |||| |||| ||||| ||||||||||| ||||||||||||| |||| ||| | |||||||||||||||||||    
T  22386965 ctttaggttgcatcttctgatgaactgtagcttctggtgatacacagcttatgatgaacttgcttctgatga 22387036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 21625114 - 21625192
Alignment:
Q  3 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||| ||||| |||||||||||||||||||||||  ||||| ||| |||||| |||||| || |||||| |||||||||    
T  21625114 agtagtggagatagtggttgtacacttcgtacaattgtactttgttaacgctctttgaagaacaagcatgcaatgcctt 21625192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 16265288 - 16265211
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 78  Q
    |||||| ||||| ||||||||| |||||||||||||  ||||| | |||||||| |||||| || |||||||||||||    
T  16265288 agagtagtggaggtagtggttgcacacttcgtacaattgtactttctcaacgctctttgaagaacaagcatccaatgc 16265211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 17381539 - 17381592
Alignment:
Q  8 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaa 61  Q
    ||||| ||||| |||||||||||||||||||||||| |||||||||| ||||||    
T  17381539 tggaggtagtgattgtacacttcgtacaaacgtactttgtcaacgctctttgaa 17381592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 18435574 - 18435647
Alignment:
Q  8 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| |||||||||||||||| |||||   ||||| |||||||||| |||||| || ||||||||||||||||    
T  18435574 tggaggtagtggttgtacactttgtacacttgtactttgtcaacgctctttgaagaacaagcatccaatgcctt 18435647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 13435543 - 13435599
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttt 57  Q
    |||||| ||||| |||||||||||||||||||||||  ||||| |||||||||||||    
T  13435543 agagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctttt 13435599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 19688790 - 19688857
Alignment:
Q  14 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||||| ||||||||||||||  ||||| |||||||||| |||||| || || |||||||||||||    
T  19688790 tagtggttatacacttcgtacaattgtactttgtcaacgctctttgaagaacaaacatccaatgcctt 19688857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 26972363 - 26972285
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgccttt 82  Q
    ||||| ||||| ||||||||||||||||||  |||  ||||| |||||||||| |||||| || || ||||||||||||||    
T  26972363 gagtagtggaggtagtggttgtacacttcg--caattgtactttgtcaacgctctttgaagaacaaacatccaatgccttt 26972285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 20112837 - 20112761
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 78  Q
    ||||| ||||| ||||||||||||| |||||||||  ||||| |||||||||| ||  || || |||||||||||||    
T  20112837 gagtagtggagatagtggttgtacatttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgc 20112761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 18378326 - 18378405
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| | |||||||| ||  || || | ||||||||||||||    
T  18378326 gagtagtggagatagtggttgtacacttcgtacaattgtactttatcaacgctcttcaaagaacatgcatccaatgcctt 18378405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 237
Target Start/End: Original strand, 32544456 - 32544523
Alignment:
Q  170 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtcac 237  Q
    ||||||||||||||||  ||||| ||||||||  || ||||| |||||||||| ||||||||| ||||    
T  32544456 catctcctgatgaactagagcttatggtgattttcagcttctgatgaacttgcatctgatgacatcac 32544523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 21128399 - 21128460
Alignment:
Q  170 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatga 231  Q
    ||||| ||||||||||| |||||||||||||  | | ||||| ||||||| |||||||||||    
T  21128399 catcttctgatgaactgtagcttctggtgatataaagcttctgatgaactcgcttctgatga 21128460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 12715557 - 12715505
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 54  Q
    ||||| ||||| |||||||| ||||||||||||||  ||||| ||||||||||    
T  12715557 gagtagtggagatagtggttctacacttcgtacaattgtactttgtcaacgct 12715505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 26943587 - 26943667
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||  |||||||||||||||||||||||  |||||  | ||||||| ||  || || ||||||||||||||||    
T  26943587 agagtagtggaagtagtggttgtacacttcgtacaattgtacttcgccaacgctcttcaaagaacaagcatccaatgcctt 26943667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 2791 - 2568
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||||           ||||||||||||| |||||||||||| ||||||||    
T  2791 agagtagtggagttagtggttgtacacttcatacaaacgtactatgtcaacgct-----------aagcatccaatgcttttcaaaatagccgttgctat 2703  T
Q  101 acttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgat 200  Q
    ||||||||||||||||||||||||||||||||||| ||||| | ||||| ||||  || |||| |||| ||| |||||||||||||||| ||||||||||    
T  2702 acttttccagtcttctgcaattttaggcgagtttgaatccttg-aaacagcttttgaaactttaggttgcatttcctgatgaactgcagtttctggtgat 2604  T
Q  201 tcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    | ||| ||||| ||||||||||||||||||||||||    
T  2603 ttacagcttctgatgaacttgcttctgatgacgtca 2568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 921 - 686
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| ||||  |||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||| | |||||||||||||||||| ||    
T  921 agagtagtggaagtagtggttgtacacttcgtacaaacgtattatgtcaacgctctttgaagaataagcatccaatacatttcaaaatagctgttgccat 822  T
Q  101 acttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtga 199  Q
    ||||||| ||||||||||||||| ||| |||||| |  |||| | ||||| ||||  || ||||  ||| |||||||||||||||||||| |||||||||    
T  821 acttttctagtcttctgcaatttatagacgagttagagtccttg-aaacagcttttgaaactttaagtttcatctcctgatgaactgcagtttctggtga 723  T
Q  200 ttcacaacttctaatgaacttgcttctgatgacgtca 236  Q
      |||| ||||| |||||||||||||| |||||||||    
T  722 aacacagcttctgatgaacttgcttctaatgacgtca 686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 109; Significance: 6e-55; HSPs: 3)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 9571 - 9810
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcc---------tttcaaaatagc 91  Q
    |||||| ||||| ||||||||||||||||||||||  ||||||||||||||||| |||| | |||||||||||||||||         |||||||||||     
T  9571 agagtagtggagatagtggttgtacacttcgtacagtcgtactatgtcaacgctgtttgtagaataagcatccaatgcccttcaatcctttcaaaatagt 9670  T
Q  92 tgttgctatacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagct 191  Q
     ||||||||||||| ||||||||||||||| |||| | |||||| ||||| |||| |||||||  |||||||  ||| ||||||||||||||||||||||    
T  9671 cgttgctatactttcccagtcttctgcaatcttagacaagtttgaatccttgaaa-caacttttgaagctttaagttgcatctcctgatgaactgcagct 9769  T
Q  192 tctggtgattcacaacttctaatgaacttgcttctgatgac 232  Q
    |||||||||||||| ||| | ||||||||||||||||||||    
T  9770 tctggtgattcacagcttatgatgaacttgcttctgatgac 9810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 22231 - 21992
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcct--------ttcaaa-atagc 91  Q
    |||||| ||||| |||||||||||||||||||||||||||| ||||||||||||  ||||| ||||||||||||||||||        |||||| ||||     
T  22231 agagtactggagatagtggttgtacacttcgtacaaacgtattatgtcaacgctcattgaagaataagcatccaatgccttccaatccttcaaagatagt 22132  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
     |||||||||||| |||||||||||||||| ||||| |||||||  |||||   ||||||||||  || ||||  ||| ||||| || ||||||| || |    
T  22131 cgttgctatacttctccagtcttctgcaatctttagacgagttttaatcct-ttaaacaacttttgaacctttaagttgcatcttctaatgaactacaac 22033  T
Q  191 ttctggtgattcacaacttctaatgaacttgcttctgatga 231  Q
    ||||||||||||||| ||||| || ||||||||||||||||    
T  22032 ttctggtgattcacagcttctgataaacttgcttctgatga 21992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 19043 - 19123
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgccttt 82  Q
    ||||| ||||| ||||||||||||||||||||||   ||||| |  ||||||| |||||| || ||||||| |||||||||    
T  19043 gagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaagaacaagcatcaaatgccttt 19123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 102; Significance: 9e-51; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 60814 - 61058
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaa---------aatagc 91  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| || |||||| ||||||||| |||         ||||||    
T  60814 agagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaacaagcattcaatgccttccaatccttccaaaatagc 60913  T
Q  92 tgttgctatacttttccagtcttctgcaatttt-aggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
     |||||||||||||||||||||||||||||||| || |||||||  |||||  ||| |||||||  ||| |||  ||| |||||||||||||||| || |    
T  60914 cgttgctatacttttccagtcttctgcaatttttagacgagtttaaatcctttaaa-caacttttgaagttttaagttgcatctcctgatgaactacaac 61012  T
Q  191 ttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    |||||||||||| |||||||| || |||||||||||||||||||||    
T  61013 ttctggtgattctcaacttctgataaacttgcttctgatgacgtca 61058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0527 (Bit Score: 101; Significance: 3e-50; HSPs: 2)
Name: scaffold0527
Description:

Target: scaffold0527; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 21 - 236
Target Start/End: Original strand, 7963 - 8186
Alignment:
Q  21 tgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc---------ctttcaaaatagctgttgctatacttttccagt 111  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||         ||||||||||||  |||||||||||||||||||    
T  7963 tgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatcgaatgcaattcaatcctttcaaaatagtcgttgctatacttttccagt 8062  T
Q  112 cttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttct 211  Q
    |||||||||| |||| |||||||| ||||| | ||||| ||||  |||||||  ||||||||| |||||||||||||||||||||||||||||| |  ||    
T  8063 cttctgcaatcttagacgagtttgaatccttg-aaacagcttttgaagctttaagttacatcttctgatgaactgcagcttctggtgattcacagccact 8161  T
Q  212 aatgaacttgcttctgatgacgtca 236  Q
     ||| || |||||||||||||||||    
T  8162 gatgtacgtgcttctgatgacgtca 8186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0527; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 113 - 236
Target Start/End: Original strand, 1 - 123
Alignment:
Q  113 ttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttcta 212  Q
    ||||||||| |||| |||||||| ||||| |||| || ||||  |||||||  ||||||||| |||||||||||||||||||||||||||||| |  ||     
T  1 ttctgcaatcttagacgagtttgaatccttgaaa-cagcttttgaagctttaagttacatcttctgatgaactgcagcttctggtgattcacagccactg 99  T
Q  213 atgaacttgcttctgatgacgtca 236  Q
    ||| || |||||||||||||||||    
T  100 atgtacgtgcttctgatgacgtca 123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 7256 - 7019
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagc 91  Q
    |||||| ||||| ||||||||||||||||||||||||||||| ||||||||| | |||||| |||||||||||||||         |||| ||||||||     
T  7256 agagtagtggagatagtggttgtacacttcgtacaaacgtaccatgtcaacgttgtttgaagaataagcatccaatgctttccaatccttccaaaatagt 7157  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
     ||||||||||||||||||||||||||||| || || || ||||| |||||   ||||| ||||  |||||||  ||| |||||||||||||||| ||||    
T  7156 cgttgctatacttttccagtcttctgcaatcttcagacgggtttgaatcct-tcaaacagcttttgaagctttaagttgcatctcctgatgaactacagc 7058  T
Q  191 ttctggtgattcacaacttctaatgaacttgcttctgat 229  Q
    ||||||||||||||| ||||| |||||||||||||||||    
T  7057 ttctggtgattcacagcttctgatgaacttgcttctgat 7019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 3 - 236
Target Start/End: Original strand, 9168 - 9409
Alignment:
Q  3 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagctg 93  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||         |||| ||||||||  |    
T  9168 agtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttctaatccttccaaaatagtcg 9267  T
Q  94 ttgctatacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttc 193  Q
    |||||||||||||||| ||||||||||| || |  ||||||| ||||    ||||| ||||  |||||||  ||| |||||||||||||||| || ||||    
T  9268 ttgctatacttttccaatcttctgcaatctttgatgagtttgaatcc-gttaaacagcttttgaagctttaagttgcatctcctgatgaactacaacttc 9366  T
Q  194 tggtgattcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    ||||||||| || ||||| || ||||||||||||||| |||||    
T  9367 tggtgattctcagcttctgataaacttgcttctgatggcgtca 9409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 85; Significance: 1e-40; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 232
Target Start/End: Complemental strand, 65484 - 65289
Alignment:
Q  45 tgtcaacgctttttgaataataagcatccaatgcc---------tttcaaaatagctgttgctatacttttccagtcttctgcaattttaggcgagtttg 135  Q
    |||||||||| |||||| |||||||||||||||||         |||||||||||  ||| ||||||||||||||||||||||||| |||| ||||||||    
T  65484 tgtcaacgctctttgaagaataagcatccaatgccctttaatcctttcaaaatagtcgtttctatacttttccagtcttctgcaatcttagacgagtttg 65385  T
Q  136 tatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgac 232  Q
     ||||| ||||  | ||||  |||||||  ||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  65384 aatccttgaaat-agcttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctgatgaacttgcttctgatgac 65289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 232
Target Start/End: Complemental strand, 144529 - 144334
Alignment:
Q  45 tgtcaacgctttttgaataataagcatccaatgcc---------tttcaaaatagctgttgctatacttttccagtcttctgcaattttaggcgagtttg 135  Q
    |||||||||| |||||| |||||||||||||||||         |||||||| ||  ||||||||||||||||||||||||||||| |||| ||||||||    
T  144529 tgtcaacgctctttgaagaataagcatccaatgccctttaatcctttcaaaacagtcgttgctatacttttccagtcttctgcaatcttagacgagtttg 144430  T
Q  136 tatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgac 232  Q
     ||||| ||||  | ||||  |||||||  ||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  144429 aatccttgaaat-agcttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctgatgaacttgcttctgatgac 144334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 165046 - 164966
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||| ||||||| |||||||||||||| ||||||| |||||||||| ||||||  ||||||||||||||||||    
T  165046 agagtagtggaggtagtggtcgtacacttcgtacagacgtactttgtcaacgctctttgaaggataagcatccaatgcctt 164966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 215597 - 215358
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagc 91  Q
    |||||| ||||| |||||||||||||||||||||||||||||| |||||||||| |||||| || ||||||||||||         ||||||||||||||    
T  215597 agagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaaatagc 215498  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
     ||||||  ||||||| ||||||||||||| ||||| |||||||| |||| |  ||||| ||||  ||| |||  ||| ||||||||||| |||||||||    
T  215497 cgttgcttcacttttctagtcttctgcaatctttagacgagtttgaatcc-attaaacagcttttgaagttttaagttgcatctcctgataaactgcagc 215399  T
Q  191 ttctggtgattcacaacttctaatgaacttgcttctgatga 231  Q
    |||||||||||  |  ||||| || ||||||||||||||||    
T  215398 ttctggtgattttcggcttctgataaacttgcttctgatga 215358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 7392 - 7622
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| ||||  |||||||||||||||||||||||| |||||||||||||||| |||||  ||| |||||||||||| ||||||| |||| ||||| |     
T  7392 agagtagtggaagtagtggttgtacacttcgtacaaatgtactatgtcaacgctctttgatgaattagcatccaatgcatttcaaactagccgttgccac 7491  T
Q  101 acttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtga 199  Q
    ||| || |||||||||| ||||| |||||||||| |  |||| | ||||||||||  ||   ||| ||| |||||| |||||||||  ||||||||||||    
T  7492 actctttcagtcttctgtaatttctaggcgagttagagtccttg-aaacaacttttgaaaacttgagttccatctcttgatgaactaaagcttctggtga 7590  T
Q  200 ttcacaacttctaatgaacttgcttctgatga 231  Q
    | || | ||||| |||||||||||||||||||    
T  7591 tacatagcttctgatgaacttgcttctgatga 7622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 5425 - 5209
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcg-tacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgcta 99  Q
    |||||| ||||  ||||||||||||||||   |||| |||||||||||||||||| |||||| |||| ||||||||||| |||||||||||||||||| |    
T  5425 agagtagtggaagtagtggttgtacacttttctacatacgtactatgtcaacgctctttgaagaataggcatccaatgcatttcaaaatagctgttgcca 5326  T
Q  100 tacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtg 198  Q
     || |||||||||||||||||| |||||||||||| |  ||||  |||||| ||||  || || |  |||  ||||||||||||||||||||||||||||    
T  5325 cacatttccagtcttctgcaatctttaggcgagttagagtcct-taaaacagcttttgaaactataagttcaatctcctgatgaactgcagcttctggtg 5227  T
Q  199 attcacaacttctaatga 216  Q
    || |||| ||||| ||||    
T  5226 atacacagcttctgatga 5209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 14 - 232
Target Start/End: Complemental strand, 78453 - 78226
Alignment:
Q  14 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagctgttgctatactt 104  Q
    |||||||||||||||||||||||||||||| |||||||||| ||| || |||||||||||||||         |||||||||||||  ||||||  ||||    
T  78453 tagtggttgtacacttcgtacaaacgtactttgtcaacgctctttaaagaataagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactt 78354  T
Q  105 ttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattca 203  Q
    ||||||||||||||||| ||||| |||||||| |||| |  ||| | ||||  |||||||  | | |||||| ||||||||| ||||||||||||||||     
T  78353 ttccagtcttctgcaatctttagacgagtttgaatccga-taaatagcttttgaagctttaagctgcatctcatgatgaactacagcttctggtgattct 78255  T
Q  204 caacttctaatgaacttgcttctgatgac 232  Q
    ||  |||| ||||||||||||||||||||    
T  78254 cagattctgatgaacttgcttctgatgac 78226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 8 - 231
Target Start/End: Original strand, 3322 - 3554
Alignment:
Q  8 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagctgttgct 98  Q
    ||||| |||||||||||||||| ||||||||||||||| |||||||| |||||| ||||| |||||||||         |||| ||||||||| |||| |    
T  3322 tggaggtagtggttgtacactttgtacaaacgtactatatcaacgctctttgaagaataaacatccaatgccttcaaatccttccaaaatagccgttgtt 3421  T
Q  99 atacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggt 197  Q
    ||||||||||| ||||||||||| ||||| |||||||| ||||    ||||| ||||  |||||||  ||| ||||||||||||||||  ||||||||||    
T  3422 atacttttccaatcttctgcaatctttagacgagtttgaatcc-gttaaacagcttttgaagctttaagttgcatctcctgatgaactatagcttctggt 3520  T
Q  198 gattcacaacttctaatgaacttgcttctgatga 231  Q
    ||||  || ||||| || ||||||||||||||||    
T  3521 gattttcagcttctgataaacttgcttctgatga 3554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 6840 - 6601
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcc---------tttcaaaatagc 91  Q
    |||||| ||||| |||||||||||||||||||||||||||||| |||||| ||| |||||| || ||||||||||||||         |||||||||||     
T  6840 agagtactggaggtagtggttgtacacttcgtacaaacgtactttgtcaatgctctttgaagaacaagcatccaatgccttcaaatcttttcaaaatagt 6741  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
     | ||||  |||||||||||||||||||||  |||| | |||||| ||||    ||||| ||||  |||||||  ||| |||||||||||||||| ||||    
T  6740 cggtgcttcacttttccagtcttctgcaatccttagacaagtttgaatcc-gttaaacagcttttgaagctttaagttgcatctcctgatgaactacagc 6642  T
Q  191 ttctggtgattcacaacttctaatgaacttgcttctgatga 231  Q
    |||||||||||| || ||||| || ||||||||||||||||    
T  6641 ttctggtgattctcagcttctgataaacttgcttctgatga 6601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 103 - 234
Target Start/End: Complemental strand, 23551 - 23421
Alignment:
Q  103 ttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattc 202  Q
    ||||||||||||||||||| |||| |||||||| ||||| |||| || ||||  |||||||  ||| |||||||||||||||||||||||||||||||||    
T  23551 ttttccagtcttctgcaatcttagacgagtttgaatccttgaaa-cagcttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattc 23453  T
Q  203 acaacttctaatgaacttgcttctgatgacgt 234  Q
    ||| ||||| |||||||||||| |||||||||    
T  23452 acagcttctgatgaacttgcttttgatgacgt 23421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 25499 - 25415
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaa 85  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||| || |||||| |||||  |||||||||| |||||    
T  25499 agagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacactctttgaagaataactatccaatgcccttcaa 25415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 87700 - 87578
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 100  Q
    |||||| ||||  |||||||||||||||||||||| |||||||||||||||||| |||||| |||  ||||||||||| |||||||||||  ||||| ||    
T  87700 agagtagtggaagtagtggttgtacacttcgtacagacgtactatgtcaacgctctttgaagaatttgcatccaatgcatttcaaaatagtcgttgccat 87601  T
Q  101 acttttccagtcttctgcaattt 123  Q
    |||||| ||||||||||||||||    
T  87600 actttttcagtcttctgcaattt 87578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 232
Target Start/End: Complemental strand, 5700 - 5459
Alignment:
Q  3 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt---------tcaaaatagctg 93  Q
    |||| ||||| ||||||||||||||||| || ||| ||||| |||||||||| |||||| |||||||||| ||||||||         ||||||||| ||    
T  5700 agtagtggaggtagtggttgtacacttcatataaatgtactttgtcaacgctctttgaagaataagcatcaaatgccttcaaatcctttcaaaatagttg 5601  T
Q  94 ttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaa---ctgcag 189  Q
    ||||| |||||||||||||||||||||| ||||| |||||||| |||| |  ||||||||||  || ||||   || ||||| ||||||||   | ||||    
T  5600 ttgctttacttttccagtcttctgcaatctttagacgagtttgaatcc-attaaacaacttttgaatctttaaattgcatcttctgatgaacagcagcag 5502  T
Q  190 cttctggtgattcacaacttctaatgaacttgcttctgatgac 232  Q
    ||||||||||||| || ||||| || |||||||||||||||||    
T  5501 cttctggtgattctcagcttctgataaacttgcttctgatgac 5459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 123 - 236
Target Start/End: Complemental strand, 246215 - 246103
Alignment:
Q  123 ttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgc 222  Q
    ||||||||||||| ||||| |||| |||||||  |||||||  ||| ||||||||||||||||||| |||||||||||||||| ||||| ||||||||||    
T  246215 ttaggcgagtttgaatccttgaaa-caacttttgaagctttaagttgcatctcctgatgaactgcaacttctggtgattcacagcttctgatgaacttgc 246117  T
Q  223 ttctgatgacgtca 236  Q
    ||||||||||||||    
T  246116 ttctgatgacgtca 246103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 212365 - 212442
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 78  Q
    |||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || || |||||||||||||    
T  212365 agagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgc 212442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 99305 - 99069
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagc 91  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||| |||  |||||| |||||||||||||||         |||| ||||||||     
T  99305 agagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcagcgc--tttgaagaataagcatccaatgccttgtaatccttccaaaatagt 99208  T
Q  92 tgttgctatacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagct 191  Q
     |||||||||||||||| ||| ||||||| ||||| |||||||| ||||    ||||| ||||  |||||||  ||| ||  |||||||||||| || ||    
T  99207 cgttgctatacttttccggtcatctgcaactttagacgagtttgaatcc-gttaaacagcttttgaagctttaagttgcacttcctgatgaactacaact 99109  T
Q  192 tctggtgattcacaacttctaatgaacttgcttctgatga 231  Q
    |||||||||   || ||||| || ||||||||||||||||    
T  99108 tctggtgatcttcagcttctgataaacttgcttctgatga 99069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 19559 - 19433
Alignment:
Q  14 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagctgttgctatactt 104  Q
    |||||||||||||||||||||||  ||| |||||||||||| ||  || || ||||||||||||         ||||||||||||| |||||||  |||     
T  19559 tagtggttgtacacttcgtacaattgtattatgtcaacgctcttcaaagaacaagcatccaatgcttttaaatcctttcaaaatagttgttgcttcactc 19460  T
Q  105 ttccagtcttctgcaatt-ttaggcga 130  Q
    ||| |||||||||||||| ||||||||    
T  19459 ttctagtcttctgcaattcttaggcga 19433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 65; Significance: 1e-28; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 211409 - 211612
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagc 91  Q
    |||||| ||||| |||| |||||| ||||||||||||||||||||||||||||| |||||| |||||||||| ||||         |||| ||||||||     
T  211409 agagtagtggaggtagtagttgtatacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatcaaatgcattaaaatccttacaaaatagt 211508  T
Q  92 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 190  Q
     ||||||||||||||||||||||||||||| ||||| |||||||| ||||    ||||||||||  |||||||  | | ||||||||||||| || ||||    
T  211509 cgttgctatacttttccagtcttctgcaatctttagacgagtttgaatcc-gttaaacaacttttgaagctttaagctgcatctcctgatgagctacagc 211607  T
Q  191 ttctg 195  Q
    |||||    
T  211608 ttctg 211612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 220250 - 220326
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 78  Q
    ||||| ||||| |||||||| ||||||||||||||  ||||| |||||||||| ||  ||||| |||||||||||||    
T  220250 gagtagtggaggtagtggttatacacttcgtacaattgtactttgtcaacgctcttcaaataacaagcatccaatgc 220326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 377658 - 377579
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| ||||| |||||||||||||||| ||||||  ||||| |||||| ||| ||  || || ||||||||||||||||    
T  377658 gagtagtggagatagtggttgtacacttggtacaattgtactttgtcaatgctcttcaaagaacaagcatccaatgcctt 377579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 244384 - 244308
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg 77  Q
    |||||| ||||| |||||||||||||||||||||||  || || | |||||||| ||  || || ||||||||||||    
T  244384 agagtagtggaggtagtggttgtacacttcgtacaattgtcctttttcaacgctcttcaaagaacaagcatccaatg 244308  T

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Target: scaffold0280 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 2830 - 2702
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg--------cctttcaaaatagct 92  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||| || |||||| |||| ||||||||||        |||| ||||||||      
T  2830 agagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacactctttgaagaatacgcatccaatgctttccaaccttccaaaatagtc 2731  T
Q  93 gttgctatacttttccagtcttctgcaat 121  Q
    ||||| |||||||||||||||||||||||    
T  2730 gttgcaatacttttccagtcttctgcaat 2702  T

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Target: scaffold1331 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold1331
Description:

Target: scaffold1331; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 193
Target Start/End: Complemental strand, 1786 - 1598
Alignment:
Q  14 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt---------tcaaaatagctgttgctatactt 104  Q
    |||||||||||||||||||| ||||||||| |||||||||| |||||| || || |||||| ||||||         |||||||||  ||||||  ||||    
T  1786 tagtggttgtacacttcgtaaaaacgtactttgtcaacgctctttgaagaacaatcatccagtgccttcaaatcctttcaaaatagtcgttgcttcactt 1687  T
Q  105 ttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttc 193  Q
    ||| ||||||||||||| ||||  |||||||| |||| |  ||||| ||||  |||||||| ||| ||||||||||||||||||||||||    
T  1686 ttcaagtcttctgcaatatttaaacgagtttgaatcc-attaaacagcttttgaagctttgagttgcatctcctgatgaactgcagcttc 1598  T

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Target: scaffold1331; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 237
Target Start/End: Complemental strand, 515 - 466
Alignment:
Q  188 agcttctggtgattcacaacttctaatgaacttgcttctgatgacgtcac 237  Q
    ||||||||||||||  || ||||| |||||||||||||||||||||||||    
T  515 agcttctggtgattttcagcttctgatgaacttgcttctgatgacgtcac 466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 237
Target Start/End: Complemental strand, 89990 - 89910
Alignment:
Q  157 aagctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtcac 237  Q
    |||||||  ||| ||||||||||||||||||||||||||||||||  || ||||| |||||||||||||||||||||||||    
T  89990 aagctttaagttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatgaacttgcttctgatgacgtcac 89910  T

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Target: scaffold0003; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 90155 - 90075
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||| ||| ||||||||||||||||||   ||| | |||||||||| |||||| || ||||||||||||||||    
T  90155 agagtagtggaggtaggggttgtacacttcgtacacttgtattttgtcaacgctctttgaagaacaagcatccaatgcctt 90075  T

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Target: scaffold0016 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 735 - 933
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc-ctttcaaaatagctgttgcta 99  Q
    |||||| || || ||||| |||||||||||||||||||| ||||||||||||||  ||||  ||||||||||||||||  |||||||||||| |||| ||    
T  735 agagtagtgcagatagtgattgtacacttcgtacaaacgaactatgtcaacgctccttgaggaataagcatccaatgctttttcaaaatagccgttgtta 834  T
Q  100 tacttttccagtcttctgcaatttt--aggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggt 197  Q
     |||||   ||||||||||||||||   |||||| ||| ||||| | ||||| ||||  ||||||| ||||  ||||  |||||| ||||||||||||||    
T  835 -actttcaaagtcttctgcaatttttctggcgagcttgaatccttg-aaacagcttttgaagctttaggtt-gatcttttgatgatctgcagcttctggt 931  T

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Target: scaffold0151 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 67 - 231
Target Start/End: Original strand, 11447 - 11611
Alignment:
Q  67 agcatccaatgcctttcaaaatagctgttgctatacttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaactttcaaagctttgg 165  Q
    |||||||||||| ||||||| |||| ||||| | ||| ||||||||||||| ||||| |||||||||| |  |||| ||||  || ||| ||| ||| |     
T  11447 agcatccaatgcatttcaaactagccgttgccacactcttccagtcttctgtaatttctaggcgagttagagtccttgaaacaaattttgaaaactt-ga 11545  T
Q  166 gttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatga 231  Q
    ||| |||||| |||||||||||||||||||||||| || | ||| | |||||||||||| ||||||    
T  11546 gttccatctcttgatgaactgcagcttctggtgatacatagcttatgatgaacttgcttttgatga 11611  T

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Target: scaffold0084 (Bit Score: 49; Significance: 4e-19; HSPs: 3)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 445 - 365
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||| ||||||| |||||||||||||| ||||||| |||||||||| ||||||  ||||||||||||||||||    
T  445 agagtagtggaggtagtggtcgtacacttcgtacagacgtactttgtcaacgctctttgaaggataagcatccaatgcctt 365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 49344 - 49423
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| ||||| |||| ||||||||||||||||||  ||||| |||||||||| ||  || || ||||||||||||||||    
T  49344 gagtagtggagatagttgttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 49423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 32497 - 32549
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 54  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| ||||||||||    
T  32497 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgct 32549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 27529 - 27400
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt---------tcaaaatagc 91  Q
    |||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| |||||| |  ||||||||||||||||         ||||||||||    
T  27529 agagtagtggaggtagtggttgtacacttcgtacaatggtactttgtcaacgctctttgaagagcaagcatccaatgccttcgaatcctatcaaaatagc 27430  T
Q  92 tgttgctatacttttccagtcttctgcaat 121  Q
    |||||||  ||| || ||||||||||||||    
T  27429 tgttgcttcactctttcagtcttctgcaat 27400  T

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Target: scaffold0411 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 12221 - 12349
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc---------ctttcaaaatagct 92  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || ||||||||||||||||         |||||||||||| |    
T  12221 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaataagcatccaatgctttcaaattctttcaaaatagtt 12320  T
Q  93 gttgctatacttttccagtcttctgcaat 121  Q
    ||||||  ||| |||||||||||||||||    
T  12321 gttgcttcactcttccagtcttctgcaat 12349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 7715 - 7795
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgccttt 82  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| |||||| ||||| ||| ||||||||||    
T  7715 gagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaataaacatacaatgccttt 7795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 15722 - 15642
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||| ||||||| |||||||||||||| ||||||| |||||| ||| ||||||  ||||||||||||||||||    
T  15722 agagtagtggagatagtggtcgtacacttcgtacagacgtactttgtcaatgctctttgaaagataagcatccaatgcctt 15642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 38185 - 38105
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||| ||||||| |||||||||||||  ||||||| |||||||||| ||||||  ||||||||||||||||||    
T  38185 agagtagtggaggtagtggtcgtacacttcgtacggacgtactttgtcaacgctctttgaaggataagcatccaatgcctt 38105  T

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Target: scaffold0116 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 21071 - 20991
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||| |||||||||||||||||||||||  |||||  ||| ||||| |||||| |||||||||||||||||||    
T  21071 agagtagtggagatagtggttgtacacttcgtacaattgtacttggtcgacgctctttgaagaataagcatccaatgcctt 20991  T

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Target: scaffold0771 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 487 - 566
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||||||||| || ||||||||||||||||||||  |||||||||||||||| ||  || || ||||||||||||||||    
T  487 gagtaatggagataatggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgcctt 566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 236
Target Start/End: Original strand, 11929 - 12000
Alignment:
Q  165 ggttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    |||| ||||| ||||||||||| |||||||||||||  ||||||| | ||||||||||||||||||||||||    
T  11929 ggttgcatcttctgatgaactgtagcttctggtgatatacaacttttgatgaacttgcttctgatgacgtca 12000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 103585 - 103712
Alignment:
Q  3 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcc---------tttcaaaatagctg 93  Q
    |||| ||||| ||||||||| |||||||||||||  ||||| |||||||||| |||||| || ||||||||||||||         |||||||||||| |    
T  103585 agtagtggaggtagtggttgcacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttaatatcatttcaaaatagccg 103684  T
Q  94 ttgctatacttttccagtcttctgcaat 121  Q
    |||||  ||| |||||||||||||||||    
T  103685 ttgcttcactcttccagtcttctgcaat 103712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 1895 - 1817
Alignment:
Q  3 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||| ||||| ||||||| |||||||||||| | ||||||| |||||||||| ||||||  ||||||||||||||||||    
T  1895 agtagtggaggtagtggtcgtacacttcgtatagacgtactttgtcaacgctctttgaaggataagcatccaatgcctt 1817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 22687 - 22816
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagc 91  Q
    |||||| ||||| |||||||||||| |||| |||||  ||||| ||||||| || |||||| |||||||||||||||         |||||||||||||     
T  22687 agagtagtggaggtagtggttgtacgcttcatacaattgtactttgtcaacactctttgaagaataagcatccaatgccttcaaatcctttcaaaatagt 22786  T
Q  92 tgttgctatacttttccagtcttctgcaat 121  Q
     ||||||  |||||||||||||||||||||    
T  22787 cgttgcttcacttttccagtcttctgcaat 22816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 22867 - 22924
Alignment:
Q  170 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctg 227  Q
    |||||||||||||||| |||| |||||||||   || ||||| |||||||||||||||    
T  22867 catctcctgatgaactacagcctctggtgatcttcagcttctgatgaacttgcttctg 22924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 122
Target Start/End: Original strand, 60040 - 60157
Alignment:
Q  14 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagctgttgctatactt 104  Q
    |||||||||||||||||||||||  |||||||||||||||| ||  || || ||||||||||||         |||||||||||||  ||||||  ||||    
T  60040 tagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatggcttcaaatcctttcaaaatagtcgttgcttcactt 60139  T
Q  105 ttccagtcttctgcaatt 122  Q
    ||||||||||||||||||    
T  60140 ttccagtcttctgcaatt 60157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 7944 - 8013
Alignment:
Q  8 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg 77  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||| ||  || || ||||||||||||    
T  7944 tggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatg 8013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 10208 - 10128
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||| ||||||| |||||||||||||||  ||||| |||||||||| ||| || || ||||||||||||||||    
T  10208 agagtagtggaggtagtggtcgtacacttcgtacaattgtactttgtcaacgctctttaaaaaacaagcatccaatgcctt 10128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 14872 - 14819
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 54  Q
    |||||| ||||| ||||||| |||||||||||||||  ||||| ||||||||||    
T  14872 agagtagtggaggtagtggtcgtacacttcgtacaattgtactttgtcaacgct 14819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 229
Target Start/End: Original strand, 10744 - 10958
Alignment:
Q  14 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctatacttttccagtct 113  Q
    ||||||||||||| |||||||| ||  |  ||||||||||| |||||  |  |||||||| |||| ||||||| || | ||||  | ||||| | |||||    
T  10744 tagtggttgtacagttcgtacatactcataatgtcaacgctctttgaggataaagcatcctatgcttttcaaactatccgttgtca-actttccaagtct 10842  T
Q  114 tctgcaatttta--ggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttct 211  Q
    |||||||| ||   || ||| ||| ||||| |||| |||||||  ||||||| ||||  ||||  |||| | ||||||||||||||||| ||||||||||    
T  10843 tctgcaatctttctggtgagcttgaatccttgaaa-caacttttgaagctttaggttg-atcttatgataatctgcagcttctggtgatacacaacttct 10940  T
Q  212 aatgaacttgcttctgat 229  Q
     |||||||||||||||||    
T  10941 gatgaacttgcttctgat 10958  T

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Target: scaffold0207; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 229
Target Start/End: Original strand, 20814 - 20859
Alignment:
Q  184 ctgcagcttctggtgattcacaacttctaatgaacttgcttctgat 229  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||    
T  20814 ctgcagcttctggtgatacacaacttctgatgaacttgcttctgat 20859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 236
Target Start/End: Complemental strand, 20314 - 20248
Alignment:
Q  171 atctcctgatgaactgcagcttctggtgattcacaacttctaatgaac-ttgcttctgatgacgtca 236  Q
    |||| ||||||||||| ||||||||||||| |||| ||||| |||||| ||||||||||||||||||    
T  20314 atcttctgatgaactgtagcttctggtgatacacagcttctgatgaactttgcttctgatgacgtca 20248  T

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Target: scaffold0426 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 13583 - 13662
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| ||||| |||||||||||||||| ||||||  |||||||||||||||| ||  || || || |||||||||||||    
T  13583 gagtagtggagatagtggttgtacactttgtacaattgtactatgtcaacgctcttcaaagaacaaacatccaatgcctt 13662  T

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Target: scaffold0359 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 5789 - 5710
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| ||||| |||| ||||||||||||||||||  ||||| |||||||||| ||  || || ||||||||||||||||    
T  5789 gagtagtggagatagtagttgtacacttcgtacaattgtactttgtcaacgctcttaaaagaacaagcatccaatgcctt 5710  T

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Target: scaffold0050 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 236
Target Start/End: Original strand, 35401 - 35472
Alignment:
Q  165 ggttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 236  Q
    |||| ||||| |||||||| || ||||||| |||||  ||| ||||| ||||||||||||||||||||||||    
T  35401 ggttgcatcttctgatgaattgtagcttctagtgatatacagcttctgatgaacttgcttctgatgacgtca 35472  T

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Target: scaffold0908 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 3988 - 3910
Alignment:
Q  8 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaa 86  Q
    ||||| ||||||| |||||||||||||| | ||||| |||||||||| |||| |  || ||||||||| ||||||||||    
T  3988 tggaggtagtggtcgtacacttcgtacagatgtactttgtcaacgctctttgtaggatgagcatccaaagcctttcaaa 3910  T

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Target: scaffold0065 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 1703 - 1781
Alignment:
Q  3 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  ||  | ||||||||||||||||    
T  1703 agtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagtacaagcatccaatgcctt 1781  T

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Target: scaffold0861 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 5044 - 4967
Alignment:
Q  4 gtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||||||| ||||||||||||||||| |||||  ||||| |||||||||| | | || || || |||||||||||||    
T  5044 gtaatggaggtagtggttgtacacttcatacaattgtactttgtcaacgctctataaagaacaaacatccaatgcctt 4967  T

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Target: scaffold1747 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1747
Description:

Target: scaffold1747; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 1328 - 1408
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||| |||||||||||||||||||||||  ||| | | |||||||| ||  || |||||||||| ||||||||    
T  1328 agagtagtggagatagtggttgtacacttcgtacaattgtagtttttcaacgctcttcaaaaaataagcatctaatgcctt 1408  T

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Target: scaffold1745 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1745
Description:

Target: scaffold1745; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 83 - 3
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| ||||| |||||||||||||||||||||||  ||| | | |||||||| ||  || |||||||||| ||||||||    
T  83 agagtagtggagatagtggttgtacacttcgtacaattgtagtttttcaacgctcttcaaaaaataagcatctaatgcctt 3  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 231
Target Start/End: Complemental strand, 1610 - 1538
Alignment:
Q  160 ctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaac-ttgcttctgatga 231  Q
    |||| |||| ||||| ||||||||||  ||||||||||||| |||| ||||| |||||| |||||||||||||    
T  1610 ctttaggttgcatcttctgatgaactatagcttctggtgatacacagcttctgatgaactttgcttctgatga 1538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 6018 - 6098
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| | ||| |||||||||||||||| ||||||  ||||| |||||||||| ||  || || ||||||||||||||||    
T  6018 agagtagtagaggtagtggttgtacactttgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 6098  T

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Target: scaffold0337 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 14660 - 14788
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagct 92  Q
    ||||| ||||| |||||||||||||||||||| ||  ||||| |||||||||| ||  ||  | ||||||||||||         ||||||||||||| |    
T  14660 gagtagtggaggtagtggttgtacacttcgtaaaattgtactttgtcaacgctcttcaaagtacaagcatccaatgccttcaaatcctttcaaaatagtt 14759  T
Q  93 gttgctatacttttccagtcttctgcaat 121  Q
    ||||||  ||| |||||||||||||||||    
T  14760 gttgcttcactcttccagtcttctgcaat 14788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 33; Significance: 0.000000001; HSPs: 4)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 36875 - 36795
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| | ||| |||||||||||||||||||||||  || || ||||||| || ||| || || ||||||||||||||||    
T  36875 agagtagtagaggtagtggttgtacacttcgtacaattgttctttgtcaacactctttaaagaacaagcatccaatgcctt 36795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 42130 - 42210
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||| | ||| |||||||||||||||||||||||  || || ||||||| || ||| || || ||||||||||||||||    
T  42130 agagtagtagaggtagtggttgtacacttcgtacaattgttctttgtcaacactctttaaagaacaagcatccaatgcctt 42210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 207 - 236
Target Start/End: Complemental strand, 36644 - 36615
Alignment:
Q  207 cttctaatgaacttgcttctgatgacgtca 236  Q
    ||||||||||||||||||||||||||||||    
T  36644 cttctaatgaacttgcttctgatgacgtca 36615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 207 - 236
Target Start/End: Original strand, 42361 - 42390
Alignment:
Q  207 cttctaatgaacttgcttctgatgacgtca 236  Q
    ||||||||||||||||||||||||||||||    
T  42361 cttctaatgaacttgcttctgatgacgtca 42390  T

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Target: scaffold0022 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 230
Target Start/End: Original strand, 39616 - 39676
Alignment:
Q  170 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatg 230  Q
    ||||||||||||||||  |||||||||||||   || ||||| ||||||||||||||||||    
T  39616 catctcctgatgaactagagcttctggtgatcttcagcttctgatgaacttgcttctgatg 39676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 230
Target Start/End: Original strand, 137676 - 137736
Alignment:
Q  170 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatg 230  Q
    ||||||||||||||||  |||||||||||||   || ||||| ||||||||||||||||||    
T  137676 catctcctgatgaactagagcttctggtgatcttcagcttctgatgaacttgcttctgatg 137736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 9968 - 10047
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| ||||| |||||||||||||||| ||||||  ||||| |||||||||| ||  || || ||||||| ||||||||    
T  9968 gagtagtggaggtagtggttgtacactttgtacaattgtactttgtcaacgctcttcaaagaacaagcatcgaatgcctt 10047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 18720 - 18641
Alignment:
Q  2 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||| ||||| |||||||||||||||||||| ||  ||||| |||||||||| ||  || || ||| ||||||||||||    
T  18720 gagtagtggagatagtggttgtacacttcgtaaaattgtactttgtcaacgctcttcaaagaacaagtatccaatgcctt 18641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 200
Target Start/End: Complemental strand, 18539 - 18511
Alignment:
Q  172 tctcctgatgaactgcagcttctggtgat 200  Q
    |||||||||||||||||||||||||||||    
T  18539 tctcctgatgaactgcagcttctggtgat 18511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 1673 - 1748
Alignment:
Q  3 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 78  Q
    |||| ||||| ||||||||||||||||| |||||  ||||| |||||||||| ||  || | ||||||||||||||    
T  1673 agtagtggaggtagtggttgtacacttcctacaattgtactttgtcaacgctcttcaaagagtaagcatccaatgc 1748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 15130 - 15181
Alignment:
Q  3 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 54  Q
    |||| ||||| |||||||||||||||||||||||  ||||| ||||||||||    
T  15130 agtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgct 15181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 26062 - 25995
Alignment:
Q  14 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    ||||||||||||||||| |||||  ||||||||||||| || ||  || || ||||||||||||||||    
T  26062 tagtggttgtacacttcatacaattgtactatgtcaaccctcttcaaagaacaagcatccaatgcctt 25995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 2088 - 2042
Alignment:
Q  8 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 54  Q
    ||||| |||||||||||||||||||||||  ||||| ||||||||||    
T  2088 tggagatagtggttgtacacttcgtacaattgtactttgtcaacgct 2042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 15819 - 15885
Alignment:
Q  16 gtggttgtacacttcgtacaaac-gtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||||||||||||||||||||   |||||||||||||||| ||  || || ||||||||||||||||    
T  15819 gtggttgtacacttcgtacaatttgtactatgtcaacgctcttcaaagaacaagcatccaatgcctt 15885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 9916 - 9994
Alignment:
Q  3 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 81  Q
    |||| ||||| |||||||| ||||||||||||||  ||||| |||||||||| ||  || || ||||||| ||||||||    
T  9916 agtagtggaggtagtggttttacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatctaatgcctt 9994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 9980 - 10057
Alignment:
Q  1 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 78  Q
    |||||| ||||| |||||||||||||||| ||||||  ||||| ||| |||||| ||  || | ||||||||||||||    
T  9980 agagtagtggaggtagtggttgtacactttgtacaattgtactttgtgaacgctcttcaaagagtaagcatccaatgc 10057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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