View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8591_high_7 (Length: 382)
Name: NF8591_high_7
Description: NF8591
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8591_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 307; Significance: 1e-173; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 1 - 364
Target Start/End: Original strand, 48494529 - 48494886
Alignment:
| Q |
1 |
aattctaaaatcatgtaaaaataataatctaacatcaaaatgattttgtctaccaacattattttgatcttattggaattggactcggatcctagagcaa |
100 |
Q |
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| T |
48494529 |
aattctaaaatcatgtaaaaataataatctaacat--aaatgattttgtctaccaacattattttgatcttattggaattggactcggatcctagagcaa |
48494626 |
T |
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| Q |
101 |
ggcttcgggtctccaaacctcgtaaatggaaaaaatgtggttgggatgcatgatttcactaagggtggccaaccagattctctacggaagtcgggagatt |
200 |
Q |
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| T |
48494627 |
ggcttcgggtctccaaacctcatgaatggaaaaaatgtggttgggatgcatgatttcactaagggtggccaaccagattctctacggaagtcgggagatt |
48494726 |
T |
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| Q |
201 |
agttatcagtaaagctcatggatacttttttaccaataacaaagttataaaagacaatttgaattttcctaagtagaatnnnnnnnccaaaagttgttat |
300 |
Q |
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| T |
48494727 |
agttatcagtaaagctcatggatacttttttaccaataacaaagttataaaagacaatttgaattttcctaagtagaataaaaaaaccaaaagttgttat |
48494826 |
T |
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| Q |
301 |
ttcaacaaacttatgaattctgatgtgcatgtgacactaatcaatcattcatttgaagaactag |
364 |
Q |
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| T |
48494827 |
ttcaacaaacttatgaattctgatgtgcatgtgacact----aatcattcatttgaagaactag |
48494886 |
T |
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