View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8591_low_18 (Length: 308)

Name: NF8591_low_18
Description: NF8591
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8591_low_18
NF8591_low_18
[»] chr1 (76 HSPs)
chr1 (22-147)||(15435074-15435199)
chr1 (28-134)||(34878486-34878592)
chr1 (29-127)||(35484600-35484698)
chr1 (42-134)||(31983965-31984057)
chr1 (218-294)||(15434926-15435004)
chr1 (41-134)||(10776675-10776768)
chr1 (29-147)||(7337865-7337983)
chr1 (56-134)||(7836981-7837059)
chr1 (41-127)||(14872423-14872509)
chr1 (41-147)||(45415343-45415449)
chr1 (219-284)||(45415522-45415587)
chr1 (219-283)||(21686837-21686901)
chr1 (219-278)||(5983800-5983859)
chr1 (44-147)||(29738838-29738941)
chr1 (44-134)||(18939109-18939199)
chr1 (52-122)||(41176977-41177047)
chr1 (219-284)||(1742245-1742310)
chr1 (36-125)||(3228049-3228138)
chr1 (219-284)||(7337726-7337791)
chr1 (24-134)||(1742048-1742158)
chr1 (219-273)||(35462111-35462165)
chr1 (37-126)||(44915425-44915515)
chr1 (219-284)||(7836859-7836924)
chr1 (219-284)||(10776524-10776589)
chr1 (42-134)||(5983621-5983713)
chr1 (38-134)||(21686654-21686750)
chr1 (41-117)||(26535184-26535260)
chr1 (31-127)||(51916874-51916970)
chr1 (219-277)||(8211980-8212038)
chr1 (41-127)||(49626694-49626780)
chr1 (219-284)||(14872604-14872669)
chr1 (219-284)||(15836156-15836221)
chr1 (222-278)||(39888159-39888215)
chr1 (219-278)||(11462517-11462576)
chr1 (36-127)||(32679321-32679412)
chr1 (223-266)||(35484472-35484515)
chr1 (219-284)||(940327-940392)
chr1 (65-134)||(15836001-15836070)
chr1 (219-272)||(16161795-16161848)
chr1 (41-114)||(27456324-27456397)
chr1 (78-127)||(32394820-32394869)
chr1 (41-134)||(45789349-45789442)
chr1 (50-134)||(11462663-11462747)
chr1 (219-283)||(34878342-34878406)
chr1 (41-125)||(35462262-35462346)
chr1 (36-123)||(12634946-12635033)
chr1 (219-278)||(32394962-32395021)
chr1 (81-131)||(8212128-8212178)
chr1 (219-265)||(19060871-19060917)
chr1 (41-127)||(44543057-44543143)
chr1 (44-121)||(4413091-4413168)
chr1 (219-272)||(9341688-9341741)
chr1 (219-284)||(21947681-21947746)
chr1 (219-284)||(27580191-27580256)
chr1 (219-272)||(47132864-47132917)
chr1 (219-272)||(49626875-49626928)
chr1 (219-284)||(50377292-50377357)
chr1 (41-125)||(940149-940233)
chr1 (220-284)||(13144875-13144939)
chr1 (219-271)||(32679174-32679226)
chr1 (41-124)||(21947843-21947925)
chr1 (219-278)||(23291711-23291770)
chr1 (36-134)||(6218042-6218140)
chr1 (219-253)||(31984142-31984176)
chr1 (219-272)||(3871390-3871443)
chr1 (219-284)||(31918952-31919017)
chr1 (219-272)||(34413172-34413225)
chr1 (219-272)||(41994388-41994441)
chr1 (219-272)||(44543234-44543287)
chr1 (219-284)||(51916724-51916789)
chr1 (236-272)||(12635148-12635184)
chr1 (79-127)||(31692685-31692733)
chr1 (38-134)||(34413306-34413402)
chr1 (223-263)||(34528695-34528735)
chr1 (36-68)||(47132694-47132726)
chr1 (78-134)||(50377149-50377204)
[»] chr3 (95 HSPs)
chr3 (36-134)||(45568659-45568757)
chr3 (36-147)||(10232846-10232957)
chr3 (36-134)||(40487101-40487199)
chr3 (36-147)||(47895927-47896038)
chr3 (36-125)||(9998242-9998331)
chr3 (29-134)||(40556480-40556585)
chr3 (36-124)||(21431401-21431489)
chr3 (44-147)||(12050850-12050953)
chr3 (36-127)||(48650957-48651048)
chr3 (219-284)||(36461494-36461559)
chr3 (41-134)||(38545616-38545709)
chr3 (36-125)||(47042276-47042365)
chr3 (219-283)||(9998427-9998491)
chr3 (219-283)||(10108196-10108260)
chr3 (219-283)||(10233030-10233094)
chr3 (31-147)||(32701269-32701385)
chr3 (36-124)||(35865158-35865246)
chr3 (36-123)||(10108014-10108101)
chr3 (219-278)||(40556672-40556731)
chr3 (29-147)||(6954898-6955016)
chr3 (36-125)||(10229250-10229339)
chr3 (219-284)||(43488653-43488718)
chr3 (219-284)||(45568508-45568573)
chr3 (219-283)||(6954760-6954824)
chr3 (29-97)||(43488849-43488917)
chr3 (219-278)||(12050717-12050776)
chr3 (33-127)||(7449124-7449217)
chr3 (33-127)||(7457266-7457359)
chr3 (41-147)||(33579649-33579755)
chr3 (29-127)||(36461653-36461751)
chr3 (219-273)||(40487285-40487339)
chr3 (219-284)||(12149847-12149912)
chr3 (219-284)||(20608962-20609027)
chr3 (219-284)||(35864995-35865060)
chr3 (219-284)||(38545759-38545824)
chr3 (219-284)||(38860183-38860248)
chr3 (219-283)||(10229436-10229500)
chr3 (219-283)||(44960016-44960080)
chr3 (219-283)||(47042113-47042177)
chr3 (46-147)||(9797732-9797830)
chr3 (41-147)||(21534012-21534116)
chr3 (36-134)||(31272021-31272120)
chr3 (219-284)||(9797597-9797657)
chr3 (219-284)||(20465033-20465098)
chr3 (219-284)||(23799973-23800038)
chr3 (231-284)||(33579852-33579905)
chr3 (231-284)||(36910704-36910757)
chr3 (26-127)||(50194505-50194606)
chr3 (36-124)||(52923340-52923428)
chr3 (220-283)||(9320018-9320081)
chr3 (36-119)||(43016631-43016714)
chr3 (219-278)||(47896112-47896171)
chr3 (41-127)||(629128-629214)
chr3 (219-273)||(21431585-21431639)
chr3 (221-283)||(52923181-52923243)
chr3 (219-272)||(7546567-7546620)
chr3 (219-284)||(21533872-21533937)
chr3 (219-284)||(31271870-31271935)
chr3 (219-280)||(43016815-43016876)
chr3 (219-284)||(48650797-48650862)
chr3 (41-125)||(953631-953715)
chr3 (29-76)||(20988028-20988075)
chr3 (48-127)||(26276015-26276094)
chr3 (219-266)||(29239300-29239347)
chr3 (78-124)||(20465192-20465238)
chr3 (65-127)||(54148793-54148855)
chr3 (219-261)||(54148951-54148993)
chr3 (42-95)||(9688488-9688541)
chr3 (219-272)||(12947352-12947405)
chr3 (219-272)||(27706308-27706361)
chr3 (223-283)||(32701457-32701515)
chr3 (219-264)||(53508182-53508227)
chr3 (29-127)||(29921820-29921920)
chr3 (29-127)||(29970973-29971073)
chr3 (53-113)||(37040575-37040635)
chr3 (36-71)||(1803246-1803281)
chr3 (219-262)||(4019694-4019737)
chr3 (47-134)||(7546397-7546484)
chr3 (219-266)||(8914665-8914712)
chr3 (219-278)||(53099750-53099809)
chr3 (219-262)||(53807945-53807988)
chr3 (36-134)||(21290034-21290132)
chr3 (41-71)||(53808140-53808170)
chr3 (224-265)||(3606738-3606779)
chr3 (78-127)||(4821625-4821674)
chr3 (219-284)||(20987862-20987927)
chr3 (219-272)||(21289896-21289949)
chr3 (29-70)||(36910934-36910975)
chr3 (219-272)||(51487063-51487116)
chr3 (219-272)||(51923680-51923733)
chr3 (220-264)||(4821766-4821810)
chr3 (31-127)||(23800131-23800230)
chr3 (106-134)||(29239184-29239212)
chr3 (41-97)||(29249024-29249080)
chr3 (41-124)||(46220459-46220543)
[»] chr8 (67 HSPs)
chr8 (36-147)||(31013771-31013882)
chr8 (36-135)||(10377475-10377574)
chr8 (41-131)||(27110680-27110770)
chr8 (41-134)||(25191279-25191372)
chr8 (41-124)||(17693836-17693919)
chr8 (32-125)||(8412571-8412664)
chr8 (34-127)||(45446031-45446124)
chr8 (219-278)||(37971246-37971305)
chr8 (219-280)||(20553306-20553367)
chr8 (219-284)||(23230606-23230671)
chr8 (49-147)||(37971086-37971181)
chr8 (219-278)||(7883308-7883367)
chr8 (41-127)||(8980980-8981066)
chr8 (219-284)||(28086874-28086939)
chr8 (219-283)||(10377652-10377716)
chr8 (219-283)||(17693676-17693740)
chr8 (44-127)||(23230430-23230512)
chr8 (42-144)||(15344090-15344192)
chr8 (42-144)||(15433155-15433257)
chr8 (42-144)||(15524459-15524561)
chr8 (219-284)||(7677344-7677409)
chr8 (219-280)||(20559809-20559870)
chr8 (219-280)||(20571371-20571432)
chr8 (48-124)||(3673236-3673312)
chr8 (220-272)||(8443587-8443639)
chr8 (219-283)||(40211364-40211428)
chr8 (219-278)||(3673404-3673463)
chr8 (48-147)||(7677480-7677579)
chr8 (219-278)||(16247290-16247349)
chr8 (41-147)||(20559944-20560050)
chr8 (41-147)||(20571506-20571612)
chr8 (41-131)||(28897494-28897584)
chr8 (220-278)||(45445878-45445936)
chr8 (43-124)||(7883463-7883544)
chr8 (41-134)||(20553458-20553551)
chr8 (48-125)||(33214853-33214930)
chr8 (36-127)||(14545123-14545215)
chr8 (222-278)||(25191134-25191190)
chr8 (35-127)||(29617677-29617769)
chr8 (41-125)||(40211528-40211612)
chr8 (219-278)||(14544970-14545029)
chr8 (219-266)||(18890785-18890832)
chr8 (219-266)||(34609793-34609840)
chr8 (219-278)||(40619140-40619199)
chr8 (41-127)||(1236913-1236999)
chr8 (219-265)||(8826172-8826218)
chr8 (32-134)||(8867603-8867705)
chr8 (219-272)||(1236772-1236825)
chr8 (219-272)||(1239472-1239525)
chr8 (219-272)||(39657410-39657463)
chr8 (220-280)||(471231-471291)
chr8 (220-272)||(14585663-14585715)
chr8 (40-124)||(24099484-24099567)
chr8 (48-124)||(29937905-29937981)
chr8 (219-262)||(5917714-5917757)
chr8 (78-125)||(8443743-8443789)
chr8 (83-134)||(8826033-8826084)
chr8 (46-125)||(41684221-41684300)
chr8 (222-284)||(27110526-27110588)
chr8 (222-284)||(27498425-27498487)
chr8 (47-117)||(27498565-27498635)
chr8 (42-96)||(36948688-36948742)
chr8 (221-266)||(5333391-5333436)
chr8 (219-260)||(24099343-24099384)
chr8 (223-284)||(36948498-36948559)
chr8 (219-290)||(34611789-34611863)
chr8 (38-90)||(41060482-41060534)
[»] chr6 (47 HSPs)
chr6 (29-147)||(12170265-12170383)
chr6 (36-147)||(33053370-33053481)
chr6 (36-134)||(3913789-3913886)
chr6 (219-283)||(33053232-33053296)
chr6 (29-124)||(68225-68320)
chr6 (222-284)||(3913637-3913699)
chr6 (37-125)||(24227936-24228024)
chr6 (41-132)||(605986-606077)
chr6 (219-278)||(606166-606225)
chr6 (36-131)||(29255660-29255755)
chr6 (41-147)||(29320064-29320173)
chr6 (36-127)||(32328805-32328896)
chr6 (29-147)||(23128388-23128506)
chr6 (219-284)||(7515265-7515330)
chr6 (41-125)||(9723602-9723687)
chr6 (219-284)||(32327280-32327345)
chr6 (219-283)||(23128580-23128644)
chr6 (49-147)||(30894427-30894524)
chr6 (29-98)||(9721761-9721830)
chr6 (219-284)||(29319941-29320006)
chr6 (219-283)||(30608578-30608643)
chr6 (78-131)||(32191950-32192003)
chr6 (222-282)||(13546728-13546788)
chr6 (38-134)||(32059688-32059784)
chr6 (42-125)||(7515426-7515509)
chr6 (219-278)||(32059871-32059930)
chr6 (219-278)||(34018522-34018581)
chr6 (219-265)||(127632-127678)
chr6 (235-284)||(20220856-20220905)
chr6 (235-284)||(22114840-22114889)
chr6 (219-272)||(30493491-30493544)
chr6 (219-266)||(1523363-1523410)
chr6 (219-273)||(7976254-7976308)
chr6 (48-98)||(9719643-9719693)
chr6 (219-272)||(30776627-30776680)
chr6 (219-283)||(68065-68129)
chr6 (220-284)||(3355080-3355144)
chr6 (42-134)||(4010715-4010807)
chr6 (222-278)||(29255514-29255570)
chr6 (219-263)||(31852272-31852316)
chr6 (47-147)||(34018348-34018448)
chr6 (219-266)||(14801782-14801829)
chr6 (36-134)||(1523185-1523283)
chr6 (219-265)||(32191813-32191859)
chr6 (247-284)||(4010574-4010611)
chr6 (219-272)||(8102681-8102734)
chr6 (41-125)||(27097834-27097918)
[»] chr5 (51 HSPs)
chr5 (29-127)||(7035996-7036094)
chr5 (29-147)||(13006997-13007115)
chr5 (29-147)||(38597566-38597684)
chr5 (41-127)||(6012360-6012446)
chr5 (219-278)||(9113794-9113853)
chr5 (219-280)||(13007189-13007250)
chr5 (46-127)||(38007143-38007224)
chr5 (219-284)||(38597757-38597822)
chr5 (36-127)||(25979933-25980024)
chr5 (47-134)||(26878294-26878380)
chr5 (41-147)||(31391959-31392065)
chr5 (36-125)||(26825204-26825293)
chr5 (43-134)||(34945204-34945295)
chr5 (36-125)||(15571261-15571350)
chr5 (219-283)||(6012202-6012266)
chr5 (41-134)||(7929979-7930068)
chr5 (219-283)||(26825390-26825454)
chr5 (219-283)||(35850759-35850823)
chr5 (219-278)||(6216859-6216918)
chr5 (52-147)||(9113927-9114022)
chr5 (36-115)||(11977171-11977250)
chr5 (219-284)||(11073963-11074028)
chr5 (219-284)||(14726524-14726589)
chr5 (219-284)||(24229847-24229912)
chr5 (219-278)||(14082442-14082501)
chr5 (219-278)||(31391822-31391881)
chr5 (219-272)||(2979388-2979441)
chr5 (43-127)||(6216676-6216761)
chr5 (219-284)||(11976998-11977063)
chr5 (29-117)||(24230018-24230107)
chr5 (223-284)||(25980122-25980183)
chr5 (230-278)||(7930148-7930196)
chr5 (50-124)||(11074124-11074199)
chr5 (219-258)||(28386895-28386934)
chr5 (36-134)||(14211009-14211106)
chr5 (36-134)||(39567071-39567169)
chr5 (219-284)||(8096560-8096625)
chr5 (219-284)||(11867628-11867693)
chr5 (219-272)||(14211180-14211233)
chr5 (219-272)||(19103549-19103602)
chr5 (219-272)||(28540988-28541041)
chr5 (29-96)||(13421711-13421779)
chr5 (50-134)||(35850574-35850657)
chr5 (36-92)||(41630286-41630342)
chr5 (235-278)||(37986182-37986225)
chr5 (219-278)||(38007318-38007377)
chr5 (29-71)||(8985215-8985257)
chr5 (50-115)||(4770927-4770992)
chr5 (219-284)||(7036179-7036244)
chr5 (219-272)||(19280991-19281044)
chr5 (36-133)||(28541122-28541219)
[»] chr4 (86 HSPs)
chr4 (41-147)||(2520578-2520684)
chr4 (40-134)||(26091128-26091222)
chr4 (29-134)||(26633885-26633990)
chr4 (28-124)||(22610972-22611068)
chr4 (36-147)||(4142956-4143067)
chr4 (41-134)||(10496143-10496236)
chr4 (36-124)||(19853736-19853824)
chr4 (219-283)||(22611164-22611228)
chr4 (42-127)||(22558687-22558772)
chr4 (36-124)||(13633910-13633998)
chr4 (32-120)||(56156782-56156870)
chr4 (219-278)||(35348288-35348347)
chr4 (36-127)||(53810824-53810915)
chr4 (48-134)||(9178165-9178251)
chr4 (41-127)||(54021662-54021748)
chr4 (219-284)||(11300054-11300119)
chr4 (219-284)||(56040709-56040774)
chr4 (219-283)||(17949388-17949452)
chr4 (219-283)||(17953240-17953304)
chr4 (31-127)||(22300636-22300732)
chr4 (219-283)||(32766495-32766559)
chr4 (22-125)||(5119120-5119223)
chr4 (219-278)||(40066124-40066183)
chr4 (36-134)||(48257664-48257762)
chr4 (48-125)||(9165267-9165344)
chr4 (219-284)||(21686305-21686369)
chr4 (219-284)||(56156705-56156770)
chr4 (219-283)||(19853576-19853640)
chr4 (220-284)||(24099130-24099194)
chr4 (41-125)||(33920853-33920937)
chr4 (219-266)||(4142836-4142883)
chr4 (219-266)||(13634096-13634143)
chr4 (29-124)||(21686465-21686560)
chr4 (219-266)||(26633752-26633799)
chr4 (219-278)||(43510178-43510237)
chr4 (36-134)||(35348102-35348200)
chr4 (219-284)||(12199756-12199821)
chr4 (222-283)||(53811012-53811073)
chr4 (31-127)||(21662276-21662371)
chr4 (31-127)||(21671040-21671135)
chr4 (29-97)||(51024713-51024781)
chr4 (219-283)||(2520758-2520824)
chr4 (219-278)||(33921032-33921091)
chr4 (51-134)||(43510010-43510093)
chr4 (30-147)||(45418319-45418433)
chr4 (36-127)||(51888438-51888529)
chr4 (219-280)||(5119320-5119381)
chr4 (223-284)||(10496320-10496381)
chr4 (218-279)||(26090984-26091045)
chr4 (219-272)||(28857380-28857433)
chr4 (219-284)||(29120426-29120491)
chr4 (219-272)||(31891369-31891422)
chr4 (219-260)||(36204475-36204516)
chr4 (40-125)||(36204604-36204689)
chr4 (219-283)||(53444099-53444163)
chr4 (32-127)||(29961151-29961246)
chr4 (219-278)||(44596645-44596704)
chr4 (219-278)||(54021841-54021900)
chr4 (219-269)||(19896617-19896667)
chr4 (222-264)||(35395756-35395798)
chr4 (42-124)||(53443928-53444010)
chr4 (219-272)||(22300827-22300880)
chr4 (36-125)||(24099295-24099384)
chr4 (219-272)||(36194683-36194736)
chr4 (219-272)||(52944289-52944342)
chr4 (42-134)||(22039013-22039105)
chr4 (36-132)||(27651744-27651840)
chr4 (36-147)||(32766309-32766421)
chr4 (219-278)||(8670466-8670525)
chr4 (219-266)||(27651918-27651965)
chr4 (219-278)||(37030242-37030301)
chr4 (219-262)||(38166313-38166356)
chr4 (223-266)||(49072809-49072852)
chr4 (29-115)||(1621719-1621805)
chr4 (41-71)||(9643178-9643208)
chr4 (219-265)||(43353611-43353657)
chr4 (41-127)||(47320623-47320709)
chr4 (222-272)||(52934022-52934072)
chr4 (219-284)||(9178334-9178399)
chr4 (36-125)||(9713697-9713786)
chr4 (29-134)||(18935576-18935681)
chr4 (219-272)||(31381718-31381771)
chr4 (219-272)||(38706756-38706809)
chr4 (219-272)||(47320469-47320522)
chr4 (220-277)||(52060993-52061050)
chr4 (222-266)||(29961005-29961049)
[»] chr2 (77 HSPs)
chr2 (29-147)||(4778532-4778650)
chr2 (36-147)||(7646258-7646369)
chr2 (29-147)||(12677498-12677616)
chr2 (46-147)||(7678080-7678181)
chr2 (29-134)||(27097620-27097725)
chr2 (41-125)||(1421462-1421546)
chr2 (36-147)||(7448034-7448145)
chr2 (36-147)||(31788242-31788353)
chr2 (29-134)||(35220110-35220212)
chr2 (36-134)||(4098889-4098987)
chr2 (36-134)||(36943339-36943437)
chr2 (219-284)||(1421647-1421712)
chr2 (219-284)||(7677937-7678002)
chr2 (29-134)||(43397334-43397439)
chr2 (219-283)||(7646444-7646508)
chr2 (47-147)||(18763265-18763365)
chr2 (219-283)||(36943186-36943250)
chr2 (222-283)||(4099077-4099138)
chr2 (44-133)||(5428084-5428173)
chr2 (219-283)||(7448218-7448282)
chr2 (40-124)||(9169482-9169566)
chr2 (219-283)||(35220296-35220360)
chr2 (219-283)||(38445137-38445201)
chr2 (220-283)||(4778725-4778788)
chr2 (36-147)||(11985432-11985543)
chr2 (220-278)||(27097476-27097534)
chr2 (41-123)||(31128974-31129056)
chr2 (219-284)||(5427932-5427997)
chr2 (219-284)||(11985294-11985359)
chr2 (219-284)||(18763439-18763504)
chr2 (219-284)||(37876670-37876735)
chr2 (219-284)||(43397183-43397248)
chr2 (220-284)||(31210671-31210735)
chr2 (54-134)||(37876813-37876893)
chr2 (219-278)||(9169328-9169387)
chr2 (219-281)||(4041661-4041723)
chr2 (36-126)||(29279794-29279883)
chr2 (219-280)||(4904213-4904274)
chr2 (219-272)||(10237299-10237352)
chr2 (219-283)||(1415528-1415592)
chr2 (222-278)||(31788431-31788487)
chr2 (219-283)||(33923676-33923740)
chr2 (219-278)||(19062422-19062481)
chr2 (37-96)||(42698928-42698987)
chr2 (42-128)||(41694407-41694493)
chr2 (219-272)||(12647999-12648052)
chr2 (219-284)||(19028978-19029043)
chr2 (49-134)||(24461238-24461323)
chr2 (219-284)||(42698765-42698829)
chr2 (222-286)||(30400097-30400161)
chr2 (41-124)||(8809073-8809156)
chr2 (219-262)||(29173805-29173848)
chr2 (219-266)||(29574713-29574760)
chr2 (219-266)||(32448703-32448750)
chr2 (41-115)||(36691657-36691732)
chr2 (219-278)||(36691845-36691904)
chr2 (219-278)||(39310922-39310981)
chr2 (41-127)||(4904358-4904444)
chr2 (29-71)||(23933869-23933911)
chr2 (41-127)||(32448843-32448929)
chr2 (78-124)||(36175666-36175712)
chr2 (65-147)||(38444982-38445063)
chr2 (219-272)||(6358952-6359005)
chr2 (219-264)||(10929632-10929677)
chr2 (41-125)||(28871987-28872069)
chr2 (222-266)||(34128769-34128813)
chr2 (219-278)||(36323840-36323899)
chr2 (41-124)||(37416493-37416576)
chr2 (246-284)||(18107811-18107849)
chr2 (219-277)||(31128851-31128909)
chr2 (219-272)||(3308909-3308962)
chr2 (41-134)||(18107951-18108044)
chr2 (36-125)||(25509291-25509379)
chr2 (48-96)||(4042230-4042278)
chr2 (223-271)||(17249226-17249274)
chr2 (219-263)||(29279655-29279699)
chr2 (220-272)||(34335780-34335831)
[»] scaffold0127 (2 HSPs)
scaffold0127 (29-147)||(15261-15379)
scaffold0127 (219-273)||(15452-15506)
[»] chr7 (64 HSPs)
chr7 (41-147)||(19404956-19405062)
chr7 (41-134)||(42978391-42978484)
chr7 (36-134)||(9450352-9450450)
chr7 (42-127)||(12141530-12141615)
chr7 (36-147)||(8013667-8013778)
chr7 (218-281)||(19404823-19404886)
chr7 (49-147)||(37837660-37837758)
chr7 (219-284)||(8001609-8001674)
chr7 (34-147)||(30757021-30757134)
chr7 (219-284)||(47590274-47590339)
chr7 (42-127)||(48061206-48061291)
chr7 (219-284)||(48316875-48316940)
chr7 (219-283)||(30756883-30756947)
chr7 (219-278)||(19296833-19296892)
chr7 (219-278)||(34899676-34899735)
chr7 (219-278)||(42978573-42978632)
chr7 (219-284)||(37837521-37837586)
chr7 (219-284)||(39171653-39171718)
chr7 (41-147)||(34899809-34899912)
chr7 (219-283)||(39328854-39328918)
chr7 (47-147)||(48317014-48317114)
chr7 (36-127)||(4529857-4529948)
chr7 (219-278)||(9450206-9450265)
chr7 (36-147)||(19296656-19296767)
chr7 (36-147)||(39171794-39171905)
chr7 (29-124)||(47590085-47590180)
chr7 (29-147)||(13797133-13797251)
chr7 (219-284)||(12141371-12141436)
chr7 (219-284)||(48061385-48061450)
chr7 (29-125)||(39329017-39329113)
chr7 (219-281)||(26623856-26623918)
chr7 (222-283)||(38798747-38798808)
chr7 (219-284)||(45349862-45349927)
chr7 (219-278)||(24770209-24770268)
chr7 (32-127)||(25287403-25287498)
chr7 (219-266)||(40993145-40993192)
chr7 (40-134)||(5078608-5078702)
chr7 (218-272)||(24350919-24350973)
chr7 (219-284)||(9977269-9977334)
chr7 (219-272)||(28476183-28476236)
chr7 (219-272)||(31235838-31235891)
chr7 (232-284)||(3267275-3267327)
chr7 (219-266)||(1749235-1749282)
chr7 (36-127)||(40992960-40993050)
chr7 (219-273)||(24069471-24069525)
chr7 (228-278)||(25255199-25255249)
chr7 (219-272)||(22742900-22742953)
chr7 (219-264)||(35132903-35132948)
chr7 (219-284)||(39228978-39229043)
chr7 (220-256)||(13797023-13797059)
chr7 (220-272)||(48930730-48930782)
chr7 (41-124)||(3224642-3224725)
chr7 (219-266)||(25287267-25287314)
chr7 (41-96)||(45350445-45350500)
chr7 (219-265)||(3394434-3394480)
chr7 (55-125)||(9915941-9916011)
chr7 (55-125)||(9923853-9923923)
chr7 (29-70)||(24350695-24350737)
chr7 (219-272)||(1485303-1485356)
chr7 (219-284)||(4530040-4530104)
chr7 (219-272)||(6001999-6002052)
chr7 (58-123)||(24770055-24770120)
chr7 (222-267)||(27997054-27997099)
chr7 (78-134)||(22087137-22087193)
[»] scaffold0884 (2 HSPs)
scaffold0884 (42-147)||(2174-2279)
scaffold0884 (219-278)||(2042-2101)
[»] scaffold0026 (2 HSPs)
scaffold0026 (29-134)||(72079-72184)
scaffold0026 (219-278)||(71933-71992)
[»] scaffold0445 (2 HSPs)
scaffold0445 (36-134)||(1120-1218)
scaffold0445 (219-284)||(1305-1370)
[»] scaffold0017 (2 HSPs)
scaffold0017 (219-284)||(32810-32875)
scaffold0017 (36-127)||(32970-33061)
[»] scaffold0219 (1 HSPs)
scaffold0219 (46-134)||(15053-15141)
[»] scaffold0088 (2 HSPs)
scaffold0088 (29-147)||(50555-50673)
scaffold0088 (219-253)||(50747-50781)
[»] scaffold0262 (1 HSPs)
scaffold0262 (45-125)||(2041-2121)
[»] scaffold0634 (1 HSPs)
scaffold0634 (219-284)||(8473-8538)
[»] scaffold0136 (1 HSPs)
scaffold0136 (219-284)||(10105-10170)
[»] scaffold0064 (1 HSPs)
scaffold0064 (36-124)||(19261-19348)
[»] scaffold0009 (2 HSPs)
scaffold0009 (41-127)||(58301-58387)
scaffold0009 (219-259)||(58167-58207)
[»] scaffold0603 (1 HSPs)
scaffold0603 (42-134)||(7500-7591)
[»] scaffold0554 (1 HSPs)
scaffold0554 (53-123)||(10672-10742)
[»] scaffold0087 (1 HSPs)
scaffold0087 (29-127)||(25551-25649)
[»] scaffold0050 (1 HSPs)
scaffold0050 (219-281)||(66108-66170)
[»] scaffold0888 (1 HSPs)
scaffold0888 (219-264)||(1768-1813)
[»] scaffold0492 (1 HSPs)
scaffold0492 (65-134)||(12721-12790)
[»] scaffold0049 (1 HSPs)
scaffold0049 (222-284)||(71363-71425)
[»] scaffold0128 (1 HSPs)
scaffold0128 (219-283)||(36791-36855)
[»] scaffold0039 (1 HSPs)
scaffold0039 (220-272)||(93065-93117)


Alignment Details
Target: chr1 (Bit Score: 86; Significance: 4e-41; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 22 - 147
Target Start/End: Complemental strand, 15435199 - 15435074
Alignment:
Q  22 aatcttgagccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatt 121  Q
    |||||||||||||  ||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||    
T  15435199 aatcttgagccggctctagttttttattgagagaaactccaacttctctcaaaaccttctttcttcttcattcatcaaggaggggcggttttaggtcatt 15435100  T
Q  122 ttttgatctagaactagccctctaca 147  Q
    |||||||||||||  | |||||||||    
T  15435099 ttttgatctagaatcaaccctctaca 15435074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 134
Target Start/End: Complemental strand, 34878592 - 34878486
Alignment:
Q  28 gagccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    ||||||| |||| |||| |||||||||||||||||||||||||  |||| ||||||||| ||| |||||| |||||| ||||||||||||||||||||||    
T  34878592 gagccggccctagttttctagtgagagaaactccaacttctctttaaactttctttctctttcgttcatcgaggaggggtggttttaggtcattttttga 34878493  T
Q  128 tctagaa 134  Q
     ||||||    
T  34878492 cctagaa 34878486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 29 - 127
Target Start/End: Complemental strand, 35484698 - 35484600
Alignment:
Q  29 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    |||||| |||| |||| |||||||||||||||||||||||||| |||| ||||||||||||| |||||| |||||| |||||| |||||||||||||||    
T  35484698 agccggccctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttgtaggtcattttttga 35484600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 42 - 134
Target Start/End: Original strand, 31983965 - 31984057
Alignment:
Q  42 tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    |||||||||||||||||||||||||||||| |||| |||||||| |||  ||||||||||||  |||||||||||||||||||||| ||||||    
T  31983965 tttttagtgagagaaactccaacttctctctaaactttctttcttctttgttcatcaaggagaggtggttttaggtcattttttgacctagaa 31984057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 218 - 294
Target Start/End: Complemental strand, 15435004 - 15434926
Alignment:
Q  218 agtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc--gtcgtgatgt 294  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||  ||||||||||    
T  15435004 agtgatttcgtcgtctaagtgcggcgttctgttgttcgttgtcttgtgcggcgtttgattttgcgtcttgtcgtgatgt 15434926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 41 - 134
Target Start/End: Complemental strand, 10776768 - 10776675
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    |||||||| |||||||||||||| ||||||| |||| |||||||||||||||||||| |||| | |||||||||| ||||||||||| ||||||    
T  10776768 ttttttagggagagaaactccaatttctctctaaactttctttctccttcattcatcgaggaagggtggttttagatcattttttgacctagaa 10776675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 29 - 147
Target Start/End: Complemental strand, 7337983 - 7337865
Alignment:
Q  29 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat 128  Q
    |||||| |||| |||| |||||| ||||||| ||||||||||| |||| ||||||||||||| |||||| ||||||  ||||| || |||||||||||||    
T  7337983 agccggccctagttttctagtgaaagaaacttcaacttctctctaaactttctttctccttcgttcatcgaggagggatggttctatgtcattttttgat 7337884  T
Q  129 ctagaactagccctctaca 147  Q
    ||||||  | |||||||||    
T  7337883 ctagaatcacccctctaca 7337865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 134
Target Start/End: Complemental strand, 7837059 - 7836981
Alignment:
Q  56 aactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    |||||||||||||||| |||||||||||||| ||| |||||| |||| | |||||||||||||||||||||||||||||    
T  7837059 aactccaacttctctctaaaccttctttctctttcgttcatcgaggaagggtggttttaggtcattttttgatctagaa 7836981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 41 - 127
Target Start/End: Original strand, 14872423 - 14872509
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    |||||||||||||||||||||||||||| ||  ||| |||||||| ||||||||||| || |||||||||||| |||||||||||||    
T  14872423 ttttttagtgagagaaactccaacttctttctgaactttctttcttcttcattcatcgagaaggtgtggttttcggtcattttttga 14872509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 41 - 147
Target Start/End: Original strand, 45415343 - 45415449
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 140  Q
    |||| |||||||||||||| ||||||||||  |||| |||||||| |||| || ||| |||||| |||||||||||||||||||||||||||||  | ||    
T  45415343 ttttctagtgagagaaacttcaacttctctttaaactttctttcttcttcgtttatcgaggaggggtggttttaggtcattttttgatctagaatcaccc 45415442  T
Q  141 ctctaca 147  Q
    |||||||    
T  45415443 ctctaca 45415449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 45415522 - 45415587
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||    
T  45415522 gtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcatcgtttgatttcgcgtc 45415587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 283
Target Start/End: Original strand, 21686837 - 21686901
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgt 283  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||    
T  21686837 gtgatttcgtcgtctaagtacggcgttgtgttgttcgtcgtcttgtgcggcgtttgattttgcgt 21686901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 5983800 - 5983859
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  5983800 gtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtttgattt 5983859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 44 - 147
Target Start/End: Complemental strand, 29738941 - 29738838
Alignment:
Q  44 tttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctc 143  Q
    ||||| ||||||||||||||| |||||| |||| ||||||||||||| |||||| |||||| |||||||||||||| ||||| | ||||||  | |||||    
T  29738941 tttagagagagaaactccaacatctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcaattttttacctagaatcacccctc 29738842  T
Q  144 taca 147  Q
    ||||    
T  29738841 taca 29738838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 44 - 134
Target Start/End: Original strand, 18939109 - 18939199
Alignment:
Q  44 tttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    |||||||||||||||| || |||||||| ||   |||||||||||||||| ||| |||||  |||||||||||||||||||||||||||||    
T  18939109 tttagtgagagaaacttcaccttctctctaagttttctttctccttcattaatcgaggagaggtggttttaggtcattttttgatctagaa 18939199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 52 - 122
Target Start/End: Original strand, 41176977 - 41177047
Alignment:
Q  52 gagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattt 122  Q
    |||||||||||||||||||| |||| ||||||||||||| |||||| |||||| |||||||||||||||||    
T  41176977 gagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattt 41177047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 1742245 - 1742310
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||| |||||    
T  1742245 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgacgtttgatttcgcgtc 1742310  T

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Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 125
Target Start/End: Original strand, 3228049 - 3228138
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt 125  Q
    |||| |||| |||| ||| ||||||||||||||| | |||  || |||||||||||||||||||||||| ||||||||||||||||||||    
T  3228049 cctagttttctagttagaaaaactccaacttctccctaaattttatttctccttcattcatcaaggaggggtggttttaggtcatttttt 3228138  T

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Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 7337791 - 7337726
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||    
T  7337791 gtgatttcatcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcaacgtttgatttcgcgtc 7337726  T

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Target: chr1; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 24 - 134
Target Start/End: Original strand, 1742048 - 1742158
Alignment:
Q  24 tcttgagccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttt 123  Q
    |||| |||||| | || |||| ||||||||||||||| ||||||| || |||| | ||||||| ||| |||||||||||   ||||||||||||||||||    
T  1742048 tcttcagccggccttagttttctagtgagagaaactcaaacttctttctaaacttcctttctctttcgttcatcaaggaatggtggttttaggtcatttt 1742147  T
Q  124 ttgatctagaa 134  Q
    |||| ||||||    
T  1742148 ttgacctagaa 1742158  T

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Target: chr1; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 219 - 273
Target Start/End: Complemental strand, 35462165 - 35462111
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgttt 273  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  35462165 gtgatttcgtcgtgtaagtgcggcgttgtgttgttcgtcgtcttgtgcagcgttt 35462111  T

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Target: chr1; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 44915425 - 44915515
Alignment:
Q  37 ctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtg-tggttttaggtcattttttg 126  Q
    |||||||| |||||||| ||| | ||||||||||| |||| ||||||||| |||||||||| |||||| | ||||||||||||||||||||    
T  44915425 ctaattttctagtgagaaaaatttcaacttctctctaaactttctttctcattcattcatcgaggaggggttggttttaggtcattttttg 44915515  T

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Target: chr1; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 7836924 - 7836859
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||  |||||||||| |||||    
T  7836924 gtgatttcatcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgacgtttgatttcgcgtc 7836859  T

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Target: chr1; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 10776589 - 10776524
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||| ||||||||||||||||||| |||||||||||||||| ||| |||||||||| ||||||    
T  10776589 gtgatttagtcgtctaagtgcggcgttgtgttgttcgtcgtcttatgcggcgtttgattgtgcgtc 10776524  T

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Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 134
Target Start/End: Original strand, 5983621 - 5983713
Alignment:
Q  42 tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    ||||||| ||||||||||  |||||||||| |||| || |||||||||| |||||| ||||||  ||||||||| ||||||||||| ||||||    
T  5983621 tttttagagagagaaactttaacttctctctaaactttatttctccttcgttcatcgaggagggatggttttagatcattttttgacctagaa 5983713  T

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Target: chr1; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 134
Target Start/End: Original strand, 21686654 - 21686750
Alignment:
Q  38 taattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    |||||||||||||||||||||| |||||| | || |||  ||||||||| ||| |||||| |||||   || |||||||||||||||||||||||||    
T  21686654 taattttttagtgagagaaactgcaacttttttctaaattttctttctctttcgttcatcgaggagagatgattttaggtcattttttgatctagaa 21686750  T

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Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 26535184 - 26535260
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggt 117  Q
    |||| ||||||||||||||| |||||||||| |||| |||| |||||||| ||||||||||| | ||||||||||||    
T  26535184 ttttctagtgagagaaactctaacttctctctaaactttctctctccttcgttcatcaaggatgagtggttttaggt 26535260  T

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Target: chr1; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 127
Target Start/End: Complemental strand, 51916970 - 51916874
Alignment:
Q  31 ccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    |||| |||| ||||||||||||||||||| ||| || |||| |||| ||||||||||||| |||||  |||||| |||||||||||  |||||||||    
T  51916970 ccggccctagttttttagtgagagaaacttcaatttttctctaaactttctttctccttcgttcatagaggaggggtggttttaggctattttttga 51916874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 219 - 277
Target Start/End: Complemental strand, 8212038 - 8211980
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgatt 277  Q
    ||||||||||||||||| ||||||||| |||||||| ||||||||||| ||||||||||    
T  8212038 gtgatttcgtcgtctaaatgcggcgttgtgttgttcatcgtcttgtgcggcgtttgatt 8211980  T

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Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 127
Target Start/End: Original strand, 49626694 - 49626780
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    |||||| |||||||||||||||||||||||| ||   ||| ||||| |||| ||||| |||||| |||||||||||||||| |||||    
T  49626694 tttttttgtgagagaaactccaacttctctctaagtgttccttctctttcactcatcgaggaggggtggttttaggtcattctttga 49626780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 14872604 - 14872669
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||| |||||| ||||||||| || |||||||||||||||||||| ||||||||||| |||||    
T  14872604 gtgattttgtcgtccaagtgcggcattgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtc 14872669  T

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Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 15836156 - 15836221
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||| |||||||||||| | | || |||||||||||||||||||||||||||||||| |||||    
T  15836156 gtgattttgtcgtctaagtgtgacattgtgttgttcgtcgtcttgtgcagcgtttgatttcgcgtc 15836221  T

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Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 222 - 278
Target Start/End: Original strand, 39888159 - 39888215
Alignment:
Q  222 atttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    |||||||||||||||||||||||| || ||||| ||||||| |||||||||||||||    
T  39888159 atttcgtcgtctaagtgcggcgttgtggtgttcttcgtcttctgcagcgtttgattt 39888215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 11462576 - 11462517
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    ||||||||||| ||||||| |||| || |||||||||||||||||||| |||||||||||    
T  11462576 gtgatttcgtcatctaagtccggcattttgttgttcgtcgtcttgtgcggcgtttgattt 11462517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 127
Target Start/End: Complemental strand, 32679412 - 32679321
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    |||| ||||||||||||||||| |||||||| |||| ||   ||||||||| |||| || || |||||| ||||||||| ||||||||||||    
T  32679412 cctagttttttagtgagagaaattccaacttttctctaagttttctttctctttcactcgtcgaggaggggtggttttatgtcattttttga 32679321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 35484515 - 35484472
Alignment:
Q  223 tttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgc 266  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  35484515 tttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgc 35484472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 940327 - 940392
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    |||||| |||||||||||||||| ||| ||||||| ||||||||||||  |||||||||| |||||    
T  940327 gtgattccgtcgtctaagtgcggtgttgtgttgtttgtcgtcttgtgcgacgtttgatttcgcgtc 940392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 134
Target Start/End: Original strand, 15836001 - 15836070
Alignment:
Q  65 ttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    |||||||  ||| ||||||||| || |||||||||||||  |||||||||||||||||||||| ||||||    
T  15836001 ttctctcttaactttctttctctttgattcatcaaggagaggtggttttaggtcattttttgacctagaa 15836070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 16161795 - 16161848
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    ||||||||||||||| |||||| |||| |||||||||||||||||||| |||||    
T  16161795 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgtt 16161848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 27456324 - 27456397
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggtttta 114  Q
    ||||||||||||| ||||| |||||||| || |||| ||||||||||||||||| || ||||||  ||||||||    
T  27456324 ttttttagtgagaaaaacttcaacttctttctaaactttctttctccttcattcgtcgaggagggatggtttta 27456397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 32394820 - 32394869
Alignment:
Q  78 ttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    ||||||||||||| |||||| |||||| ||||||||||||||||||||||    
T  32394820 ttctttctccttcgttcatcgaggaggggtggttttaggtcattttttga 32394869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 134
Target Start/End: Original strand, 45789349 - 45789442
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    |||||||||||||||||||| |  ||||||| |||  || ||||| ||||||||||| ||||    ||||||||||||||||||||| ||||||    
T  45789349 ttttttagtgagagaaactctacgttctctctaaattttatttctacttcattcatcgaggattgatggttttaggtcattttttgacctagaa 45789442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 50 - 134
Target Start/End: Complemental strand, 11462747 - 11462663
Alignment:
Q  50 gagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    |||||||||| ||| ||||||| |||| ||||||||||||| |||||  | |||| ||| |||||||| ||||||||| ||||||    
T  11462747 gagagaaacttcaatttctctctaaactttctttctccttcgttcattgacgaggggtgattttaggttattttttgacctagaa 11462663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 34878406 - 34878342
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgt 283  Q
    |||| |||||||| ||||| ||||||| |||||||||||||||||||| | ||||||||| ||||    
T  34878406 gtgacttcgtcgtttaagtacggcgttgtgttgttcgtcgtcttgtgcggtgtttgatttcgcgt 34878342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 125
Target Start/End: Complemental strand, 35462346 - 35462262
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt 125  Q
    |||||||||| ||||||||| ||||| |||| |||| ||||||||||||| || ||  || | | ||||||||||||||||||||    
T  35462346 ttttttagtgggagaaactctaacttatctctaaactttctttctccttcgtttattgagaatgggtggttttaggtcatttttt 35462262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 12634946 - 12635033
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttt 123  Q
    |||| |||||||||||||||||||| |||||||||| |    || |||||| |||| || || |||| ||||||||||||||||||||    
T  12634946 cctagttttttagtgagagaaactcaaacttctctctatgttttttttctctttcactcgtcgaggatgtgtggttttaggtcatttt 12635033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 32394962 - 32395021
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    |||||||||||||  |||||||||||| ||||| || |||||||||||| ||||||||||    
T  32394962 gtgatttcgtcgttcaagtgcggcgttgtgttgctcatcgtcttgtgcaacgtttgattt 32395021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 8212178 - 8212128
Alignment:
Q  81 tttctccttcattcatcaaggaggtgtggttttaggtcattttttgatcta 131  Q
    |||||||||||||||||||||||| ||| |||||| | |||||||||||||    
T  8212178 tttctccttcattcatcaaggaggggtgcttttagattattttttgatcta 8212128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 265
Target Start/End: Original strand, 19060871 - 19060917
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtg 265  Q
    |||||||||||||||||||||| | || |||||||||||||||||||    
T  19060871 gtgatttcgtcgtctaagtgcgaccttgtgttgttcgtcgtcttgtg 19060917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 127
Target Start/End: Original strand, 44543057 - 44543143
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    ||||||||||||||||||||||||||||||| ||   ||| ||||| |||| ||||| |||| | ||| |||||||| ||| |||||    
T  44543057 ttttttagtgagagaaactccaacttctctctaagttttccttctctttcactcatcgaggaagggtgcttttaggttattctttga 44543143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 121
Target Start/End: Original strand, 4413091 - 4413168
Alignment:
Q  44 tttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatt 121  Q
    ||||| ||||||||||| ||||| |||| |||| |||||||| |||| || ||| |||||| || |||||||||||||    
T  4413091 tttagagagagaaactctaacttttctctaaactttctttcttcttcgtttatcgaggaggagtagttttaggtcatt 4413168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 9341688 - 9341741
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    ||||||||||||||| ||||  | ||| ||||||||||||||||||||||||||    
T  9341688 gtgatttcgtcgtctgagtggagtgttatgttgttcgtcgtcttgtgcagcgtt 9341741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 21947746 - 21947681
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||||||||||||| ||| | ||||||||||||||| |  | ||||||||||| |||||    
T  21947746 gtgatttcgtcgtctaagtgcagcgctgtgttgttcgtcgtctcggacggcgtttgatttcgcgtc 21947681  T

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Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 27580256 - 27580191
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||||| ||| ||||||||| ||||||||||||| | |||  || ||||||||||||||    
T  27580256 gtgatttcgtcgtttaaatgcggcgttgtgttgttcgtcgtatcgtgtggcatttgattttgcgtc 27580191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 47132864 - 47132917
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    ||||||||||||||| |||| |||||| ||||||||||||| |||||| |||||    
T  47132864 gtgatttcgtcgtctgagtggggcgttgtgttgttcgtcgttttgtgcggcgtt 47132917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 49626875 - 49626928
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    |||||||||||||||| ||||| | || |||||||||||||||||||| |||||    
T  49626875 gtgatttcgtcgtctatgtgcgaccttgtgttgttcgtcgtcttgtgcggcgtt 49626928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 50377292 - 50377357
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||||||||||| ||||||| ||||||||||||| || ||  || |||||||| |||||    
T  50377292 gtgatttcgtcgtctaagtacggcgttgtgttgttcgtcgttttttgtggcatttgatttcgcgtc 50377357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 125
Target Start/End: Original strand, 940149 - 940233
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt 125  Q
    ||||||||||||| |||||| || ||||||| |||  ||||||||| ||  |||||| |||| | ||||||||| ||||||||||    
T  940149 ttttttagtgagaaaaactctaaattctctctaaattttctttctcttttcttcatcgaggatgagtggttttaagtcatttttt 940233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 284
Target Start/End: Complemental strand, 13144939 - 13144875
Alignment:
Q  220 tgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    |||||||||||||||| ||||||||| ||||||  || |||||||||| | |||||||| |||||    
T  13144939 tgatttcgtcgtctaaatgcggcgttgtgttgtctgttgtcttgtgcaacatttgatttcgcgtc 13144875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 32679226 - 32679174
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgt 271  Q
    |||||||| |||||| ||||||||||| ||||||||||| |||||||| ||||    
T  32679226 gtgatttcatcgtctgagtgcggcgttgtgttgttcgtcatcttgtgcggcgt 32679174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 124
Target Start/End: Complemental strand, 21947925 - 21947843
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt 124  Q
    |||| |||||||||||||| ||| || |||| |||| |||||||| |||| |||||| |||| | |||||||||||| ||||||    
T  21947925 ttttctagtgagagaaacttcaatttttctctaaactttctttct-cttcgttcatcgaggatgggtggttttaggttattttt 21947843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 23291770 - 23291711
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    ||||||||||||||||||| ||||||| |||||||| |  ||||||||  ||||||||||    
T  23291770 gtgatttcgtcgtctaagtacggcgttgtgttgttcattatcttgtgcgacgtttgattt 23291711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 134
Target Start/End: Complemental strand, 6218140 - 6218042
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    ||||||||||||||||| |||| |||||||||||||  ||   ||||| || || | |||||||||||   || |||||| ||||||||||| ||||||    
T  6218140 cctaattttttagtgagggaaattccaacttctctcttaattatctttttcattaactcatcaaggagagatgattttagttcattttttgacctagaa 6218042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 253
Target Start/End: Original strand, 31984142 - 31984176
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgtt 253  Q
    ||||||||||||||||||||||||||| |||||||    
T  31984142 gtgatttcgtcgtctaagtgcggcgttgtgttgtt 31984176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 3871390 - 3871443
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    |||||||| || |||||||| || | | ||||||||||||||||||||||||||    
T  3871390 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcagcgtt 3871443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 31918952 - 31919017
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||||||||| ||||||| | ||||||| | | | |||||| ||||||||||| |||||    
T  31918952 gtgatttcgtcgtctaattgcggcgatgtgttgttagccattttgtgcggcgtttgatttcgcgtc 31919017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 34413225 - 34413172
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    ||||||| ||||||| |||||| | || |||||||||||||||||||| |||||    
T  34413225 gtgattttgtcgtcttagtgcgacattgtgttgttcgtcgtcttgtgcggcgtt 34413172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 41994388 - 41994441
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    ||||||||  ||||| | ||||||||| |||||||| |||||||||||||||||    
T  41994388 gtgatttcaacgtctgaatgcggcgttgtgttgttcatcgtcttgtgcagcgtt 41994441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 44543234 - 44543287
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    |||||||||||||||||||||| | || ||||||||||||| || ||| |||||    
T  44543234 gtgatttcgtcgtctaagtgcgactttgtgttgttcgtcgtattatgcggcgtt 44543287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 51916789 - 51916724
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    |||||||| |||||||| | ||| ||| ||||||| |||||||||||| || |||||||| |||||    
T  51916789 gtgatttcatcgtctaattacggtgttatgttgttagtcgtcttgtgcggcatttgatttcgcgtc 51916724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 272
Target Start/End: Original strand, 12635148 - 12635184
Alignment:
Q  236 gtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    |||||||||| |||||||||||||||||||| |||||    
T  12635148 gtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 12635184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 127
Target Start/End: Complemental strand, 31692733 - 31692685
Alignment:
Q  79 tctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    |||||||| |||| ||||| |||| ||||| ||||||||||||||||||    
T  31692733 tctttctctttcactcatcgaggatgtgtgattttaggtcattttttga 31692685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 134
Target Start/End: Complemental strand, 34413402 - 34413306
Alignment:
Q  38 taattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    |||||||||||||||||||||||   |||||||| ||   || |||||| |||| | ||| || ||| ||| |||||||||| ||||| ||||||||    
T  34413402 taattttttagtgagagaaactctgccttctctctaagttttttttctctttcacttatcgagtaggggtgattttaggtcaattttttatctagaa 34413306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 263
Target Start/End: Original strand, 34528695 - 34528735
Alignment:
Q  223 tttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttg 263  Q
    |||| ||||||||||||||| || |||||||||||||||||    
T  34528695 tttcatcgtctaagtgcggcattgtgttgttcgtcgtcttg 34528735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 68
Target Start/End: Original strand, 47132694 - 47132726
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttct 68  Q
    |||| ||||||||||||||||||||||||||||    
T  47132694 cctagttttttagtgagagaaactccaacttct 47132726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 50377149 - 50377204
Alignment:
Q  78 ttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    ||||||||||||| |||||| | ||||  ||||||||||||||||||||| ||||||    
T  50377149 ttctttctccttcgttcatcgaagagga-tggttttaggtcattttttgacctagaa 50377204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 4e-32; HSPs: 95)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 36 - 134
Target Start/End: Complemental strand, 45568757 - 45568659
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    |||| |||| |||||||||||||||||||||||||| |||| ||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||    
T  45568757 cctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgatctagaa 45568659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 147
Target Start/End: Original strand, 10232846 - 10232957
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 135  Q
    |||| |||| ||||| |||||||||||||||||||| |||| ||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||     
T  10232846 cctagttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcaaggaggggtggttttaggtcattttttgacctagaat 10232945  T
Q  136 tagccctctaca 147  Q
     | |||||||||    
T  10232946 cacccctctaca 10232957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 36 - 134
Target Start/End: Original strand, 40487101 - 40487199
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    ||||||||| |||||||||||||||||||||||||| |||| ||||||||||||| |||||| |||||| ||| |||||||||||||||||| ||||||    
T  40487101 cctaattttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtgattttaggtcattttttgacctagaa 40487199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 36 - 147
Target Start/End: Original strand, 47895927 - 47896038
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 135  Q
    |||| |||| |||||||||||||||||||||||||| |||| ||||||||||||| |||||| |||||| |||||| ||| ||||||||||| ||||||     
T  47895927 cctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttatagatcattttttgacctagaat 47896026  T
Q  136 tagccctctaca 147  Q
     | |||||||||    
T  47896027 cacccctctaca 47896038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 36 - 125
Target Start/End: Original strand, 9998242 - 9998331
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt 125  Q
    |||| |||| ||||| |||||||||||||||||||| |||| ||||||||||||| |||||| |||||| ||||||||||||||||||||    
T  9998242 cctagttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcatttttt 9998331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 134
Target Start/End: Original strand, 40556480 - 40556585
Alignment:
Q  29 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat 128  Q
    |||||| |||| |||| ||||| ||||||||||||||||| || |||| ||||||||| ||| |||||| |||||| ||||||||||||||||||||||     
T  40556480 agccggccctagttttctagtgggagaaactccaacttctttctaaactttctttctcattcgttcatcgaggaggggtggttttaggtcattttttgac 40556579  T
Q  129 ctagaa 134  Q
    ||||||    
T  40556580 ctagaa 40556585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 21431401 - 21431489
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt 124  Q
    |||| |||| ||||| |||||||||||||||||||| |||| ||||||||||||| |||||| |||||| |||||||||||||||||||    
T  21431401 cctagttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttt 21431489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 44 - 147
Target Start/End: Complemental strand, 12050953 - 12050850
Alignment:
Q  44 tttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctc 143  Q
    ||||| |||||||||||||||||||||| |||  ||||||||||||| ||||||||||| ||||||||||| || |||||||||| |||||  | |||||    
T  12050953 tttagagagagaaactccaacttctctctaaattttctttctccttcgttcatcaaggatgtgtggttttaagttattttttgatttagaatcacccctc 12050854  T
Q  144 taca 147  Q
    ||||    
T  12050853 taca 12050850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 36 - 127
Target Start/End: Complemental strand, 48651048 - 48650957
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    |||| |||| |||||| ||||||||||||||||||| |||| |||||||||| || |||||| |||||| ||||||||||||||||||||||    
T  48651048 cctagttttctagtgaaagaaactccaacttctctctaaactttctttctccatcgttcatcgaggaggggtggttttaggtcattttttga 48650957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 36461559 - 36461494
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||    
T  36461559 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtc 36461494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 41 - 134
Target Start/End: Original strand, 38545616 - 38545709
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    |||| |||||||||||||| ||||||||||| |||| ||||||||||||| |||||  |||||  |||||||||||||||||||||| ||||||    
T  38545616 ttttctagtgagagaaacttcaacttctctctaaactttctttctccttcgttcattgaggagtggtggttttaggtcattttttgacctagaa 38545709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 36 - 125
Target Start/End: Complemental strand, 47042365 - 47042276
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt 125  Q
    ||||||||| |||||| ||||||||||||||||||| |||| || ||| |||||| |||||| |||||| ||||||||||||||||||||    
T  47042365 cctaattttctagtgaaagaaactccaacttctctctaaactttatttatccttcgttcatcgaggaggggtggttttaggtcatttttt 47042276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 283
Target Start/End: Original strand, 9998427 - 9998491
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgt 283  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||    
T  9998427 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgt 9998491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 283
Target Start/End: Original strand, 10108196 - 10108260
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgt 283  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||    
T  10108196 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgt 10108260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 283
Target Start/End: Original strand, 10233030 - 10233094
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgt 283  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||    
T  10233030 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgt 10233094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 147
Target Start/End: Original strand, 32701269 - 32701385
Alignment:
Q  31 ccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatct 130  Q
    |||| |||| |||| |||||  ||||||||||||||||||  |||| ||||||||||||| |||||| ||| || |||||||||||||||||||||| ||    
T  32701269 ccggccctagttttctagtggaagaaactccaacttctctttaaactttctttctccttcgttcatcgaggtggggtggttttaggtcattttttgacct 32701368  T
Q  131 agaactagccctctaca 147  Q
    ||||  | |||||||||    
T  32701369 agaatcatccctctaca 32701385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 35865246 - 35865158
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt 124  Q
    |||| |||| |||||||||||||| ||||||||||| |||| ||||||||||||| ||| || |||||| |||||||||||||||||||    
T  35865246 cctagttttctagtgagagaaacttcaacttctctctaaactttctttctccttcgttcctcgaggaggggtggttttaggtcattttt 35865158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 10108014 - 10108101
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttt 123  Q
    |||| |||| ||||| |||||||||||||||||||| |||| ||||||||||||  |||||| |||||| ||||||||||||||||||    
T  10108014 cctagttttctagtgggagaaactccaacttctctctaaactttctttctcctttgttcatcgaggaggggtggttttaggtcatttt 10108101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 40556672 - 40556731
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  40556672 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgattt 40556731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 29 - 147
Target Start/End: Complemental strand, 6955016 - 6954898
Alignment:
Q  29 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat 128  Q
    |||||| |||| |||| |||||  ||||||||||||||||||| |||| ||||||||||||| ||||   |||||| ||| ||||||||||||||||||     
T  6955016 agccggccctagttttctagtggaagaaactccaacttctctctaaactttctttctccttcgttcactgaggaggggtgattttaggtcattttttgac 6954917  T
Q  129 ctagaactagccctctaca 147  Q
    ||||||  | |||||||||    
T  6954916 ctagaatcacccctctaca 6954898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 125
Target Start/End: Original strand, 10229250 - 10229339
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt 125  Q
    |||| |||| ||||| |||||||||||| ||||||| |||| ||||||||||||| |||||| |||||| ||||||||||||| ||||||    
T  10229250 cctagttttctagtgggagaaactccaatttctctctaaactttctttctccttctttcatcgaggaggggtggttttaggtcttttttt 10229339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 43488718 - 43488653
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||| |||||    
T  43488718 gtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtc 43488653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 45568573 - 45568508
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||| |||||    
T  45568573 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgtggcgtttgatttcgcgtc 45568508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 6954824 - 6954760
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgt 283  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||| ||||    
T  6954824 gtgatttcgtcgtctaagtgcggcgttgtattgttcgtcgtcttgtgcggcgtttgatttcgcgt 6954760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 43488917 - 43488849
Alignment:
Q  29 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatc 97  Q
    |||||| |||| ||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||    
T  43488917 agccggccctagttttttagtgagagaaacttcaacttctctctaaactttctttctccttcattcatc 43488849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 12050776 - 12050717
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  12050776 gtgatttcgtcgtctaagcgcggcgttttgttgttcgtcgtcttgtgcggcgtttgattt 12050717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 33 - 127
Target Start/End: Complemental strand, 7449217 - 7449124
Alignment:
Q  33 ggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    ||||||| |||| || ||||||||||||||||||||||| |||| || |||||| ||| ||||| |||||||  |||||||||||||||||||||    
T  7449217 ggtcctagttttctaatgagagaaactccaacttctctc-aaactttttttctctttcgttcattaaggagggctggttttaggtcattttttga 7449124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 33 - 127
Target Start/End: Complemental strand, 7457359 - 7457266
Alignment:
Q  33 ggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    ||||||| |||| || ||||||||||||||||||||||| |||| || |||||| ||| ||||| |||||||  |||||||||||||||||||||    
T  7457359 ggtcctagttttctaatgagagaaactccaacttctctc-aaactttttttctctttcgttcattaaggagggctggttttaggtcattttttga 7457266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 41 - 147
Target Start/End: Original strand, 33579649 - 33579755
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 140  Q
    |||| |||||||||||||| ||||||||||| |||| |||||| |||||| |||||| | || | ||||||||| |||||||||||| ||||||  | ||    
T  33579649 ttttctagtgagagaaacttcaacttctctctaaactttctttatccttcgttcatcgaagaagggtggttttaagtcattttttgacctagaatcaccc 33579748  T
Q  141 ctctaca 147  Q
    |||||||    
T  33579749 ctctaca 33579755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 29 - 127
Target Start/End: Complemental strand, 36461751 - 36461653
Alignment:
Q  29 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    |||||| |||| |||| ||||| |||||||| ||  ||||||| |||| ||||||||||||| |||||| |||| | ||||||||||||||||||||||    
T  36461751 agccggccctagttttctagtgtgagaaacttcatattctctctaaactttctttctccttcgttcatcgaggatgagtggttttaggtcattttttga 36461653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 219 - 273
Target Start/End: Original strand, 40487285 - 40487339
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgttt 273  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  40487285 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgttt 40487339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 12149912 - 12149847
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||| ||||||||||||||| | |||||| ||||||||||||||||||||||| |||||    
T  12149912 gtgatttcgtcatctaagtgcggcgttgtattgttcatcgtcttgtgcagcgtttgatttcgcgtc 12149847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 20609027 - 20608962
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||||||||| ||||||||| ||||||| |||||||||||| || ||||||||||||||    
T  20609027 gtgatttcgtcgtctaattgcggcgttgtgttgttagtcgtcttgtgcggcatttgattttgcgtc 20608962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 35865060 - 35864995
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||||||||| ||||||||| ||||||| |||||||||||  |||||||||||||||||    
T  35865060 gtgatttcgtcgtctaattgcggcgttgtgttgttagtcgtcttgtgtggcgtttgattttgcgtc 35864995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 38545759 - 38545824
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||||||||||| || |||| |||||||||||||||||||| ||||||||||| |||||    
T  38545759 gtgatttcgtcgtctaagtacgacgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtc 38545824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 38860248 - 38860183
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||| ||| ||||||| |||||    
T  38860248 gtgatttcgtcgtctaagtgcgacgttttgttgttcgtcgtcttgtgcggcgattgatttcgcgtc 38860183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 283
Target Start/End: Original strand, 10229436 - 10229500
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgt 283  Q
    ||||||||||| ||||||||||||||| ||||||||||| |||||||| ||||||||||| ||||    
T  10229436 gtgatttcgtcttctaagtgcggcgttgtgttgttcgtcatcttgtgcggcgtttgatttcgcgt 10229500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 44960080 - 44960016
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgt 283  Q
    ||||||||||||||||||||||| ||| | || ||||||||||||||| ||||||||||||||||    
T  44960080 gtgatttcgtcgtctaagtgcggtgttgtattattcgtcgtcttgtgcggcgtttgattttgcgt 44960016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 47042177 - 47042113
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgt 283  Q
    ||||||||||||||||||| || |||| |||||||||||||||||||| ||||||||||| ||||    
T  47042177 gtgatttcgtcgtctaagtacgacgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgt 47042113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 46 - 147
Target Start/End: Complemental strand, 9797830 - 9797732
Alignment:
Q  46 tagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctcta 145  Q
    |||||||||||||||||||||||||| |||| || |||||||||| |||||    |||  |||||||||||||||||||||| ||||||  | |||||||    
T  9797830 tagtgagagaaactccaacttctctctaaactttatttctccttcgttcat---tgagaggtggttttaggtcattttttgacctagaatcacccctcta 9797734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 41 - 147
Target Start/End: Complemental strand, 21534116 - 21534012
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 140  Q
    |||||||||||||||||||| || ||||||| |||| ||||||||||||| || ||| |||| | |||||||||||||  ||||||| ||||||  | ||    
T  21534116 ttttttagtgagagaaactctaatttctctctaaactttctttctccttcgttaatcgaggatgggtggttttaggtc--tttttgacctagaatcaccc 21534019  T
Q  141 ctctaca 147  Q
    |||||||    
T  21534018 ctctaca 21534012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 36 - 134
Target Start/End: Complemental strand, 31272120 - 31272021
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaagga-ggtgtggttttaggtcattttttgatctagaa 134  Q
    ||||||||| |||||||||||||||||||||||||| ||   |||||| |||||| |||||| |||| |||||| |||||||| ||||||| | ||||||    
T  31272120 cctaattttctagtgagagaaactccaacttctctctaagttttctttttccttcgttcatcgaggagggtgtgattttaggttattttttaacctagaa 31272021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 9797657 - 9797597
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    |||||||||||||||||||||||||||     |||||||||||||||| |||||||||||||||||    
T  9797657 gtgatttcgtcgtctaagtgcggcgtt-----gttcgtcgtcttgtgcggcgtttgattttgcgtc 9797597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 20465098 - 20465033
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    |||||||| ||||||||||| || ||| |||||||||||||||||| | |||||||||||||||||    
T  20465098 gtgatttcatcgtctaagtgaggtgttgtgttgttcgtcgtcttgtacggcgtttgattttgcgtc 20465033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 23800038 - 23799973
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||||||||| ||||||||| |||| || |||||||||||| ||||||||||| |||||    
T  23800038 gtgatttcgtcgtctaattgcggcgttgtgttcttagtcgtcttgtgcggcgtttgatttcgcgtc 23799973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 231 - 284
Target Start/End: Original strand, 33579852 - 33579905
Alignment:
Q  231 tctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||    
T  33579852 tctaagtgcagcgttgtgttgttcgtcgtcttgtgcatcgtttgattttgcgtc 33579905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 231 - 284
Target Start/End: Complemental strand, 36910757 - 36910704
Alignment:
Q  231 tctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||| |||||    
T  36910757 tctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtttgatttcgcgtc 36910704  T

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Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 26 - 127
Target Start/End: Complemental strand, 50194606 - 50194505
Alignment:
Q  26 ttgagccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt 125  Q
    ||||||||  |||| ||||||||||||||||||||||||||||||| ||   ||| ||||| |||| || || || ||| |||||||||| |||||||||    
T  50194606 ttgagccgaccctagttttttagtgagagaaactccaacttctctctaagttttcgttctctttcactcgtcgagaaggagtggttttagatcatttttt 50194507  T
Q  126 ga 127  Q
    ||    
T  50194506 ga 50194505  T

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Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 52923428 - 52923340
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt 124  Q
    |||| ||||||||||  ||||||||||||||||||| |||| ||||||||||||| |||||  |||||  || |||||| |||||||||    
T  52923428 cctatttttttagtggaagaaactccaacttctctctaaactttctttctccttcgttcattgaggagaggtagttttaagtcattttt 52923340  T

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Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 283
Target Start/End: Original strand, 9320018 - 9320081
Alignment:
Q  220 tgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgt 283  Q
    ||||||||| |||||| |||||| || ||||||||||||||||||||  |||||||||||||||    
T  9320018 tgatttcgttgtctaaatgcggcattgtgttgttcgtcgtcttgtgcgacgtttgattttgcgt 9320081  T

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Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 43016631 - 43016714
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtca 119  Q
    |||| |||| ||||||||||||||| |||||||||| |||  ||||||||| ||| |||||| |||| | ||||||||||||||    
T  43016631 cctagttttctagtgagagaaactctaacttctctctaaattttctttctctttcgttcatcgaggaagggtggttttaggtca 43016714  T

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Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 47896112 - 47896171
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    |||||||||||||| ||||| |||||| |||||||||| ||||||||| |||||||||||    
T  47896112 gtgatttcgtcgtcaaagtgtggcgttgtgttgttcgttgtcttgtgcggcgtttgattt 47896171  T

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Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 41 - 127
Target Start/End: Complemental strand, 629214 - 629128
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    |||||||||||||||||||| |||||||||| ||   ||| ||| | |||| ||||| |||||| |||||||||||||||| |||||    
T  629214 ttttttagtgagagaaactctaacttctctctaagttttccttccctttcactcatcgaggaggggtggttttaggtcattctttga 629128  T

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Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 219 - 273
Target Start/End: Original strand, 21431585 - 21431639
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgttt 273  Q
    ||||||||| |||||||||||||| || |||||||||||||||||||| ||||||    
T  21431585 gtgatttcgccgtctaagtgcggcattgtgttgttcgtcgtcttgtgcggcgttt 21431639  T

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Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 221 - 283
Target Start/End: Complemental strand, 52923243 - 52923181
Alignment:
Q  221 gatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgt 283  Q
    ||||| |||||||||||| |||| | |||||||||||||||||||| ||||||||||| ||||    
T  52923243 gattttgtcgtctaagtgtggcgctgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgt 52923181  T

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Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 7546567 - 7546620
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    ||||||||||||||| |||||| |||| |||||||||||||||||||| |||||    
T  7546567 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgtt 7546620  T

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Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 21533937 - 21533872
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    |||||||||| ||||| |||||||||| |||||||||||||||||| | ||||||| ||| |||||    
T  21533937 gtgatttcgttgtctatgtgcggcgttgtgttgttcgtcgtcttgtacggcgtttggtttcgcgtc 21533872  T

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Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 31271935 - 31271870
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    |||||||| ||||||||||||||  || |||||||||||||||||||| || |||||||| |||||    
T  31271935 gtgatttcttcgtctaagtgcggttttgtgttgttcgtcgtcttgtgcggcatttgatttcgcgtc 31271870  T

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Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 280
Target Start/End: Original strand, 43016815 - 43016876
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttg 280  Q
    |||||||||||||| |||||||||||| ||||||||||  |||||||  |||||||||||||    
T  43016815 gtgatttcgtcgtccaagtgcggcgttgtgttgttcgttatcttgtgtggcgtttgattttg 43016876  T

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Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 48650862 - 48650797
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||| |||||||||||||||| || |||||||||| ||||||||| || |||||||| |||||    
T  48650862 gtgattttgtcgtctaagtgcggcattgtgttgttcgttgtcttgtgcggcatttgatttcgcgtc 48650797  T

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Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 125
Target Start/End: Complemental strand, 953715 - 953631
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt 125  Q
    |||| |||||||||||||||||  ||||||| ||   |||||||||||||||||||  |||||  ||||||||||||| ||||||    
T  953715 ttttatagtgagagaaactccacattctctctaagttttctttctccttcattcattgaggagaagtggttttaggtcttttttt 953631  T

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Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 76
Target Start/End: Complemental strand, 20988075 - 20988028
Alignment:
Q  29 agccggtcctaattttttagtgagagaaactccaacttctctcaaaac 76  Q
    |||||| |||| ||||||||||||||||||||||||||||||| ||||    
T  20988075 agccggccctagttttttagtgagagaaactccaacttctctctaaac 20988028  T

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Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 127
Target Start/End: Complemental strand, 26276094 - 26276015
Alignment:
Q  48 gtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    ||||||||||||| || ||||||  |||| |||||||||||| ||||||  |||||  |||||||||||| |||||||||    
T  26276094 gtgagagaaactctaatttctctgtaaactttctttctcctttattcattgaggagaggtggttttaggtaattttttga 26276015  T

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Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 266
Target Start/End: Original strand, 29239300 - 29239347
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgc 266  Q
    |||||||| |||||| ||||||||||| ||||||||||||||||||||    
T  29239300 gtgatttcatcgtctgagtgcggcgttgtgttgttcgtcgtcttgtgc 29239347  T

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Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 124
Target Start/End: Complemental strand, 20465238 - 20465192
Alignment:
Q  78 ttctttctccttcattcatcaaggaggtgtggttttaggtcattttt 124  Q
    ||||||||||||||||||||||| ||| ||||||||| |||||||||    
T  20465238 ttctttctccttcattcatcaagtaggggtggttttatgtcattttt 20465192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 127
Target Start/End: Original strand, 54148793 - 54148855
Alignment:
Q  65 ttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    ||||||| |||| ||||||||||||| |  ||| |||||| ||||||||||||||||||||||    
T  54148793 ttctctctaaactttctttctccttcgtcaatcgaggaggggtggttttaggtcattttttga 54148855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 261
Target Start/End: Original strand, 54148951 - 54148993
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtct 261  Q
    |||||||||||||||||||||||| || |||||||||||||||    
T  54148951 gtgatttcgtcgtctaagtgcggcattgtgttgttcgtcgtct 54148993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 95
Target Start/End: Complemental strand, 9688541 - 9688488
Alignment:
Q  42 tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattca 95  Q
    |||||||||||||||||| ||||||||||| |||  |||||||| |||||||||    
T  9688541 tttttagtgagagaaacttcaacttctctctaaattttctttcttcttcattca 9688488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 12947405 - 12947352
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    ||||||||||||| | |||||||| || |||||||||||||||||||| |||||    
T  12947405 gtgatttcgtcgtttgagtgcggctttgtgttgttcgtcgtcttgtgcggcgtt 12947352  T

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Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 27706361 - 27706308
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    ||||||||||||||| |||| | |||| |||||||||||||||||||| |||||    
T  27706361 gtgatttcgtcgtcttagtgtgacgttgtgttgttcgtcgtcttgtgcggcgtt 27706308  T

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Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 283
Target Start/End: Original strand, 32701457 - 32701515
Alignment:
Q  223 tttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgt 283  Q
    ||||||||||||||||||||||| | ||||  |||||||||||| ||||||||||| ||||    
T  32701457 tttcgtcgtctaagtgcggcgttgtattgt--gtcgtcttgtgcggcgtttgatttcgcgt 32701515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 53508182 - 53508227
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgt 264  Q
    ||||||||||||||| | ||||||||| ||||||||||||||||||    
T  53508182 gtgatttcgtcgtctgaatgcggcgttgtgttgttcgtcgtcttgt 53508227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 127
Target Start/End: Original strand, 29921820 - 29921920
Alignment:
Q  29 agccggtcctaatttttt-agtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggtttt-aggtcattttttg 126  Q
    ||||||||||| |||||| ||| ||||| |||| | |||||||| ||   ||||||||| ||||||| || |||||| |||||||| |||||||||||||    
T  29921820 agccggtcctagtttttttagtaagagatactctaccttctctctaagttttctttctctttcattcgtcgaggaggggtggtttttaggtcattttttg 29921919  T
Q  127 a 127  Q
    |    
T  29921920 a 29921920  T

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Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 127
Target Start/End: Original strand, 29970973 - 29971073
Alignment:
Q  29 agccggtcctaatttttt-agtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggtttt-aggtcattttttg 126  Q
    ||||||||||| |||||| ||| ||||| |||| | |||||||| ||   ||||||||| ||||||| || |||||| |||||||| |||||||||||||    
T  29970973 agccggtcctagtttttttagtaagagatactctaccttctctctaagttttctttctctttcattcgtcgaggaggggtggtttttaggtcattttttg 29971072  T
Q  127 a 127  Q
    |    
T  29971073 a 29971073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 37040575 - 37040635
Alignment:
Q  53 agaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggtttt 113  Q
    |||||||| ||||||| || |||| ||||||||| ||| ||||||||||||| ||||||||    
T  37040575 agaaactcaaacttctttctaaactttctttctctttcgttcatcaaggaggggtggtttt 37040635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 71
Target Start/End: Complemental strand, 1803281 - 1803246
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctc 71  Q
    |||||||||||||||| |||||||||||||||||||    
T  1803281 cctaattttttagtgaaagaaactccaacttctctc 1803246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 262
Target Start/End: Original strand, 4019694 - 4019737
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtctt 262  Q
    ||||||||||||||| |||||| |||| ||||||||||||||||    
T  4019694 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtctt 4019737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 134
Target Start/End: Original strand, 7546397 - 7546484
Alignment:
Q  47 agtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    ||||||||||| || | |||||||| ||   |||||||||  ||| ||||| |||||| ||| |||||||||| ||||||||||||||    
T  7546397 agtgagagaaattcaatcttctctctaagttttctttctctctcactcatcgaggaggggtgattttaggtcaatttttgatctagaa 7546484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 266
Target Start/End: Original strand, 8914665 - 8914712
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgc 266  Q
    ||||||||||||||| |||||| | || ||||||||||||||||||||    
T  8914665 gtgatttcgtcgtcttagtgcgacattgtgttgttcgtcgtcttgtgc 8914712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 53099750 - 53099809
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    ||||||||||||||||| || | |||| ||||||| ||| |||||||| |||||||||||    
T  53099750 gtgatttcgtcgtctaattgtgacgttgtgttgttagtcatcttgtgcggcgtttgattt 53099809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 262
Target Start/End: Complemental strand, 53807988 - 53807945
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtctt 262  Q
    |||||||||||||||||||||| | || ||||||||||||||||    
T  53807988 gtgatttcgtcgtctaagtgcgaccttgtgttgttcgtcgtctt 53807945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 134
Target Start/End: Complemental strand, 21290132 - 21290034
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    |||||||||||||||||||||||||   |||||||| ||   ||||| ||| |||| ||||  |||||  ||| |||||||||| ||||||| ||||||    
T  21290132 cctaattttttagtgagagaaactctgtcttctctctaagttttcttcctctttcactcatggaggagaggtgattttaggtcaatttttgacctagaa 21290034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 71
Target Start/End: Complemental strand, 53808170 - 53808140
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctc 71  Q
    |||||||||||||||||||||||||||||||    
T  53808170 ttttttagtgagagaaactccaacttctctc 53808140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 265
Target Start/End: Original strand, 3606738 - 3606779
Alignment:
Q  224 ttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtg 265  Q
    |||||||||| |||||||| || |||||||||||||||||||    
T  3606738 ttcgtcgtctgagtgcggcattgtgttgttcgtcgtcttgtg 3606779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 4821625 - 4821674
Alignment:
Q  78 ttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    ||||||||| ||||||| || || ||| ||||||||||||||||||||||    
T  4821625 ttctttctctttcattcgtcgagaaggggtggttttaggtcattttttga 4821674  T

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Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 20987927 - 20987862
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||||||||| ||||| ||| |||| || |||||||||||  || |||||||| |||||    
T  20987927 gtgatttcgtcgtctaattgcggtgttgtgttcttagtcgtcttgtgtggcatttgatttcgcgtc 20987862  T

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Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 21289949 - 21289896
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    ||||||||||||||| |||||| |||| || ||||||| ||||||||| |||||    
T  21289949 gtgatttcgtcgtcttagtgcgacgttgtggtgttcgttgtcttgtgcggcgtt 21289896  T

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Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 36910975 - 36910934
Alignment:
Q  29 agccggtcctaattttttagtgagagaaactccaacttctct 70  Q
    |||||| |||| |||| |||||||||||||||||||||||||    
T  36910975 agccggccctagttttctagtgagagaaactccaacttctct 36910934  T

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Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 51487063 - 51487116
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    ||||||||||| ||| |||| | |||| |||||||||||||||||||| |||||    
T  51487063 gtgatttcgtcatcttagtgggacgttgtgttgttcgtcgtcttgtgcggcgtt 51487116  T

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Target: chr3; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 51923680 - 51923733
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    ||||||||||||||| |||| | |||| ||||||||||| |||||||| |||||    
T  51923680 gtgatttcgtcgtcttagtgtgacgttgtgttgttcgtcatcttgtgcggcgtt 51923733  T

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Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 264
Target Start/End: Original strand, 4821766 - 4821810
Alignment:
Q  220 tgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgt 264  Q
    ||||||| |||||||||||||| ||| | ||||||||||||||||    
T  4821766 tgatttcatcgtctaagtgcggtgttgtattgttcgtcgtcttgt 4821810  T

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Target: chr3; HSP #92
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 127
Target Start/End: Complemental strand, 23800230 - 23800131
Alignment:
Q  31 ccggtcctaattttttagtgagagaaactccaactt-ctctcaaaaccttctttctccttcattcatcaaggaggtg--tggttttaggtcattttttga 127  Q
    |||| |||| |||| |||||||||||||| ||| || ||||| |||  || ||||||||||||||||| | |||| |  ||||||||||| |||||||||    
T  23800230 ccggccctagttttctagtgagagaaacttcaaatttctctctaaattttttttctccttcattcatcgaagaggggggtggttttaggttattttttga 23800131  T

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Target: chr3; HSP #93
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 134
Target Start/End: Original strand, 29239184 - 29239212
Alignment:
Q  106 gtggttttaggtcattttttgatctagaa 134  Q
    |||||||||||||||||||||||||||||    
T  29239184 gtggttttaggtcattttttgatctagaa 29239212  T

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Target: chr3; HSP #94
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 29249024 - 29249080
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatc 97  Q
    |||||||||||||||||||| |||||||||  ||   |||||||||||||| |||||    
T  29249024 ttttttagtgagagaaactctaacttctctttaatttttctttctccttcactcatc 29249080  T

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Target: chr3; HSP #95
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 124
Target Start/End: Original strand, 46220459 - 46220543
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaagga-ggtgtggttttaggtcattttt 124  Q
    |||| |||||| |||||||  |||||||||| |||| ||||||||| || ||| ||  |||| || |||||||||||||||||||    
T  46220459 ttttctagtgatagaaactataacttctctctaaactttctttctcttttatttattgaggaaggggtggttttaggtcattttt 46220543  T

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Target: chr8 (Bit Score: 68; Significance: 2e-30; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 147
Target Start/End: Complemental strand, 31013882 - 31013771
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 135  Q
    |||| |||| |||||||||||||||||||||||||| |||| ||||||||||||| |||||| |||||| |||||||||||||||||||||| ||||||     
T  31013882 cctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaat 31013783  T
Q  136 tagccctctaca 147  Q
     | |||||||||    
T  31013782 cacccctctaca 31013771  T

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Target: chr8; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 36 - 135
Target Start/End: Original strand, 10377475 - 10377574
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 135  Q
    |||| |||| ||||| |||||||||||||||||||| |||| ||||||||||||| |||||| |||||| |||||||||||||||||||||| |||||||    
T  10377475 cctagttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaac 10377574  T

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Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 27110770 - 27110680
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatcta 131  Q
    |||| |||||||||||||||||||||||||| |||| |||||||||||||||||||| | || | ||||||||||||||||||||||||||    
T  27110770 ttttctagtgagagaaactccaacttctctctaaactttctttctccttcattcatcgaagatgggtggttttaggtcattttttgatcta 27110680  T

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Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 41 - 134
Target Start/End: Complemental strand, 25191372 - 25191279
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||  |||||| |||||  ||| |||||||||||||||||| ||||||    
T  25191372 ttttttagtgagagaaactccaacttctctctaaactttctttctcctttgttcatcgaggagaggtgattttaggtcattttttgacctagaa 25191279  T

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Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 41 - 124
Target Start/End: Complemental strand, 17693919 - 17693836
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt 124  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||  |||||| || ||||||||||||||||    
T  17693919 ttttttagtgagagaaactccaacttctctctaaactttctttctccttcgttcattgaggaggggttgttttaggtcattttt 17693836  T

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Target: chr8; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 32 - 125
Target Start/End: Complemental strand, 8412664 - 8412571
Alignment:
Q  32 cggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt 125  Q
    |||||||| |||| ||||||||||||||| |||||||||| |||| ||||||||| ||| |||||| || ||| ||||||||||||||||||||    
T  8412664 cggtcctagttttctagtgagagaaactctaacttctctctaaactttctttctcattcgttcatcgagtaggggtggttttaggtcatttttt 8412571  T

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Target: chr8; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 45446124 - 45446031
Alignment:
Q  34 gtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    |||||| |||| |||||||||||||||||||||||||| |||| ||||||||||||| |||||| |||| | || |||||| ||||||||||||    
T  45446124 gtcctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaagggtagttttatgtcattttttga 45446031  T

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Target: chr8; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 37971246 - 37971305
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  37971246 gtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtttgattt 37971305  T

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Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 280
Target Start/End: Complemental strand, 20553367 - 20553306
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttg 280  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||    
T  20553367 gtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttatgcggcgtttgattttg 20553306  T

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Target: chr8; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 23230606 - 23230671
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||| |||||    
T  23230606 gtgatttcgtcgtctaagtgcggcgatttgttgttcgtcgtcttgtgcggcgtttgatttcgcgtc 23230671  T

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Target: chr8; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 49 - 147
Target Start/End: Original strand, 37971086 - 37971181
Alignment:
Q  49 tgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctaca 147  Q
    ||||||||||||||||||||||| |||  |||||||| |||||||||||   |||| |||||||||||||||||||||| ||||||  | |||||||||    
T  37971086 tgagagaaactccaacttctctctaaattttctttcttcttcattcatc---gaggagtggttttaggtcattttttgacctagaatcacccctctaca 37971181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 7883367 - 7883308
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||    
T  7883367 gtgatttcgtcatctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgattt 7883308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 41 - 127
Target Start/End: Original strand, 8980980 - 8981066
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    ||||||||||||||||||||||||||||||| ||   ||| ||||| |||| || || |||||| ||||||||||||||||||||||    
T  8980980 ttttttagtgagagaaactccaacttctctctaagttttcgttctcattcactcgtcgaggaggggtggttttaggtcattttttga 8981066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 28086939 - 28086874
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||||||||||||| ||||| ||||||||||| ||||||||||| |||||||| |||||    
T  28086939 gtgatttcgtcgtctaagtgctgcgttgtgttgttcgtcatcttgtgcagcatttgatttcgcgtc 28086874  T

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Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 283
Target Start/End: Original strand, 10377652 - 10377716
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgt 283  Q
    |||||||||| |||||||||||||||| ||||||||| |||||||||| ||||||||||| ||||    
T  10377652 gtgatttcgttgtctaagtgcggcgttgtgttgttcgccgtcttgtgcggcgtttgatttcgcgt 10377716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 17693740 - 17693676
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgt 283  Q
    ||||||||||||||||||||||| ||| | ||||||||| |||||||| ||||||||||||||||    
T  17693740 gtgatttcgtcgtctaagtgcggtgttgtattgttcgtcttcttgtgcggcgtttgattttgcgt 17693676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 44 - 127
Target Start/End: Original strand, 23230430 - 23230512
Alignment:
Q  44 tttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    ||||| |||||||||||||||||||||| |||| ||||||||||||| |||||| |||| | || ||||||||||| |||||||    
T  23230430 tttagagagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggatgggt-gttttaggtcaatttttga 23230512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 144
Target Start/End: Original strand, 15344090 - 15344192
Alignment:
Q  42 tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccc 141  Q
    |||||||||||||||||||||||||||||| ||   ||  ||||| |||| ||||| |||||| |||||||||||||||| ||||| ||| || || |||    
T  15344090 tttttagtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaattacccc 15344189  T
Q  142 tct 144  Q
    |||    
T  15344190 tct 15344192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 144
Target Start/End: Original strand, 15433155 - 15433257
Alignment:
Q  42 tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccc 141  Q
    |||||||||||||||||||||||||||||| ||   ||  ||||| |||| ||||| |||||| |||||||||||||||| ||||| ||| || || |||    
T  15433155 tttttagtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaattacccc 15433254  T
Q  142 tct 144  Q
    |||    
T  15433255 tct 15433257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 144
Target Start/End: Original strand, 15524459 - 15524561
Alignment:
Q  42 tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccc 141  Q
    |||||||||||||||||||||||||||||| ||   ||  ||||| |||| ||||| |||||| |||||||||||||||| ||||| ||| || || |||    
T  15524459 tttttagtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaattacccc 15524558  T
Q  142 tct 144  Q
    |||    
T  15524559 tct 15524561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 7677409 - 7677344
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    |||||||| |||||||| ||||||||| |||||||||||||||||||| || |||||||| |||||    
T  7677409 gtgatttcatcgtctaattgcggcgttgtgttgttcgtcgtcttgtgctgcatttgatttcgcgtc 7677344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 280
Target Start/End: Complemental strand, 20559870 - 20559809
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttg 280  Q
    |||||||||||||||||||||  |||| |||||||||||||||||||| || ||||||||||    
T  20559870 gtgatttcgtcgtctaagtgcatcgttttgttgttcgtcgtcttgtgcggcctttgattttg 20559809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 280
Target Start/End: Complemental strand, 20571432 - 20571371
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttg 280  Q
    |||||||||||||||||||||  |||| |||||||||||||||||||| || ||||||||||    
T  20571432 gtgatttcgtcgtctaagtgcatcgttttgttgttcgtcgtcttgtgcggcctttgattttg 20571371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 48 - 124
Target Start/End: Original strand, 3673236 - 3673312
Alignment:
Q  48 gtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt 124  Q
    |||| ||||||| ||||||||||| |||| |||||||||||| ||||||| | ||||  ||||||||||||||||||    
T  3673236 gtgaaagaaacttcaacttctctctaaactttctttctcctttattcatcgaagagggttggttttaggtcattttt 3673312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 8443639 - 8443587
Alignment:
Q  220 tgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||| |||||    
T  8443639 tgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgtt 8443587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 40211428 - 40211364
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgt 283  Q
    ||||||||||||||||| || |||||| |||||||||||||||| ||||| ||||||||| ||||    
T  40211428 gtgatttcgtcgtctaaatgtggcgttgtgttgttcgtcgtcttatgcagtgtttgatttcgcgt 40211364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 3673404 - 3673463
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    ||||||||||||||||||||||| ||| |||||||||||||||| ||| | |||||||||    
T  3673404 gtgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttatgcggtgtttgattt 3673463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 147
Target Start/End: Complemental strand, 7677579 - 7677480
Alignment:
Q  48 gtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctaca 147  Q
    |||||| |||||| || ||||||| |||  |||||||| |||| |||||  |||||| |||||||||||||||||||||| ||||||  | |||||||||    
T  7677579 gtgagataaactctaatttctctctaaattttctttcttcttcgttcattgaggaggggtggttttaggtcattttttgacctagaatcacccctctaca 7677480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 16247349 - 16247290
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    |||||||| |||||||||||||||||| |||||||| |||||||||||  ||||||||||    
T  16247349 gtgatttcttcgtctaagtgcggcgttgtgttgttcatcgtcttgtgcgacgtttgattt 16247290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 41 - 147
Target Start/End: Complemental strand, 20560050 - 20559944
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 140  Q
    |||| ||| ||||||||| |||||||||||| |||| || ||||| |||| |||||| | |||| |||||||||| |||||||| || ||||||  | ||    
T  20560050 ttttctagggagagaaacaccaacttctctctaaactttttttcttcttcgttcatcgatgaggggtggttttagatcatttttggacctagaatcaccc 20559951  T
Q  141 ctctaca 147  Q
    |||||||    
T  20559950 ctctaca 20559944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 41 - 147
Target Start/End: Complemental strand, 20571612 - 20571506
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 140  Q
    |||| ||| ||||||||| |||||||||||| |||| || ||||| |||| |||||| | |||| |||||||||| |||||||| || ||||||  | ||    
T  20571612 ttttctagggagagaaacaccaacttctctctaaactttttttcttcttcgttcatcgatgaggggtggttttagatcatttttggacctagaatcaccc 20571513  T
Q  141 ctctaca 147  Q
    |||||||    
T  20571512 ctctaca 20571506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 28897494 - 28897584
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatcta 131  Q
    ||||||| ||||||||||| |||||||| |  ||||  || |||| |||||||| || |||||| ||||||||| ||||||||||||||||    
T  28897494 ttttttaatgagagaaacttcaacttctttttaaactctcgttcttcttcattcgtcgaggaggggtggttttaagtcattttttgatcta 28897584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 220 - 278
Target Start/End: Complemental strand, 45445936 - 45445878
Alignment:
Q  220 tgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    |||||||||||||||||| || |||| | |||||||||||||||||| |||||||||||    
T  45445936 tgatttcgtcgtctaagtacgacgttgtattgttcgtcgtcttgtgcggcgtttgattt 45445878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 124
Target Start/End: Complemental strand, 7883544 - 7883463
Alignment:
Q  43 ttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt 124  Q
    ||||||||||||||||| |||||||| || |||  ||||||||| ||| |||||| | || | |||||||||||||||||||    
T  7883544 ttttagtgagagaaacttcaacttctttctaaattttctttctcattcgttcatcgatgatgagtggttttaggtcattttt 7883463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 134
Target Start/End: Complemental strand, 20553551 - 20553458
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    |||| ||| ||||||||| |||||||||||  |||| || ||||| |||| |||||| |||||| |||||||||| |||||||| || ||||||    
T  20553551 ttttctagggagagaaacaccaacttctctttaaactttttttcttcttcgttcatcgaggaggggtggttttagatcatttttggacctagaa 20553458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 33214930 - 33214853
Alignment:
Q  48 gtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt 125  Q
    |||||| ||||| ||| ||||||| |||| ||||||||||||| |||||| |||| | ||||||||||||| ||||||    
T  33214930 gtgagacaaacttcaatttctctctaaactttctttctccttcgttcatcgaggatgggtggttttaggtcttttttt 33214853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 127
Target Start/End: Complemental strand, 14545215 - 14545123
Alignment:
Q  36 cctaatttttta-gtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    |||||||||||| ||  |||||||||||||||||||| |||     |||||||||||||| | ||||| | ||||||||||||||||||||||    
T  14545215 cctaattttttaagttcgagaaactccaacttctctctaaaaaaaatttctccttcattcgttaaggatgagtggttttaggtcattttttga 14545123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 222 - 278
Target Start/End: Complemental strand, 25191190 - 25191134
Alignment:
Q  222 atttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    ||||||| |||||||| | ||||| |||||||||||||||||||| |||||||||||    
T  25191190 atttcgttgtctaagtacagcgttgtgttgttcgtcgtcttgtgcggcgtttgattt 25191134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 35 - 127
Target Start/End: Complemental strand, 29617769 - 29617677
Alignment:
Q  35 tcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    ||||| ||||||||||||||||| | ||||||||||| |||  || |||||| |||| | ||| | ||| ||| |||||||||||||||||||    
T  29617769 tcctagttttttagtgagagaaatttcaacttctctctaaattttgtttctctttcacttatcgaagagatgttgttttaggtcattttttga 29617677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 125
Target Start/End: Complemental strand, 40211612 - 40211528
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt 125  Q
    |||| |||||||||||||||||| ||||||  |||  ||||||||||||| || ||| |||||| |||| ||||||| |||||||    
T  40211612 ttttctagtgagagaaactccaatttctctttaaaatttctttctccttcgttaatcgaggaggggtggctttaggtaatttttt 40211528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 14545029 - 14544970
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    ||||||||||||||||| ||||||||| | ||||| |||||||||||  |||||||||||    
T  14545029 gtgatttcgtcgtctaattgcggcgttgttttgttagtcgtcttgtgtggcgtttgattt 14544970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 266
Target Start/End: Complemental strand, 18890832 - 18890785
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgc 266  Q
    ||||||||||||||| |||||| |||| ||||||||||||||||||||    
T  18890832 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgc 18890785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 266
Target Start/End: Original strand, 34609793 - 34609840
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgc 266  Q
    |||||||||||||||||||||||||||  ||||||| |||||||||||    
T  34609793 gtgatttcgtcgtctaagtgcggcgttgggttgttcctcgtcttgtgc 34609840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 40619199 - 40619140
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    |||||||| |||||||||||||||||| ||||||| |||||||||||   ||||||||||    
T  40619199 gtgatttcatcgtctaagtgcggcgttgtgttgtttgtcgtcttgtgtgacgtttgattt 40619140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 127
Target Start/End: Complemental strand, 1236999 - 1236913
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    ||||||||||||||||||| ||||||||||| ||   ||| ||||| |||  ||||  |||||| |||||||||||||||| |||||    
T  1236999 ttttttagtgagagaaacttcaacttctctctaagttttccttctctttcgctcattgaggaggggtggttttaggtcattctttga 1236913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 265
Target Start/End: Original strand, 8826172 - 8826218
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtg 265  Q
    ||||||||||||||| ||||| ||||| |||||||||||||||||||    
T  8826172 gtgatttcgtcgtctgagtgcagcgttatgttgttcgtcgtcttgtg 8826218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 134
Target Start/End: Original strand, 8867603 - 8867705
Alignment:
Q  32 cggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatcta 131  Q
    |||||||| ||||||||| ||||||||| ||  ||||||| ||   ||||||||| ||||| |||| || | | ||| ||||| ||||||||||||||||    
T  8867603 cggtcctagttttttagttagagaaactacacattctctctaagttttctttctctttcatccatcgagtatgagtgattttaagtcattttttgatcta 8867702  T
Q  132 gaa 134  Q
    |||    
T  8867703 gaa 8867705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 1236825 - 1236772
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    |||||||||||||||||||||| | || |||||||||| ||||||||| |||||    
T  1236825 gtgatttcgtcgtctaagtgcgaccttgtgttgttcgttgtcttgtgcggcgtt 1236772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 1239525 - 1239472
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    |||||||||||||||||||||| | || |||||||| ||||||||||| |||||    
T  1239525 gtgatttcgtcgtctaagtgcgaccttgtgttgttcatcgtcttgtgcggcgtt 1239472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 39657410 - 39657463
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    ||||||||||||||| |||||| |||| | |||||||||||||||||| |||||    
T  39657410 gtgatttcgtcgtcttagtgcgacgttgtattgttcgtcgtcttgtgcggcgtt 39657463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 280
Target Start/End: Complemental strand, 471291 - 471231
Alignment:
Q  220 tgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttg 280  Q
    |||||| |||||| |||||||||| | ||||||||||||||| ||||  ||||||||||||    
T  471291 tgattttgtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgcgacgtttgattttg 471231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 14585663 - 14585715
Alignment:
Q  220 tgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    |||||||||||||| || ||| |||| |||||||||||||||||||| |||||    
T  14585663 tgatttcgtcgtcttagcgcgacgttgtgttgttcgtcgtcttgtgcggcgtt 14585715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 124
Target Start/End: Complemental strand, 24099567 - 24099484
Alignment:
Q  40 attttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt 124  Q
    |||||||||||||||||||| ||||||||||| |    ||||||||| |||| ||||| || ||| |||| ||||||||||||||    
T  24099567 attttttagtgagagaaacttcaacttctctctaggttttctttctctttcaatcatcgagtagg-gtggctttaggtcattttt 24099484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 124
Target Start/End: Original strand, 29937905 - 29937981
Alignment:
Q  48 gtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt 124  Q
    |||||||||||||||| ||||||  |||| |||||||| |||| |||||  |||| | |||||||||| ||||||||    
T  29937905 gtgagagaaactccaatttctctttaaactttctttctacttcgttcattgaggatgggtggttttagatcattttt 29937981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 262
Target Start/End: Complemental strand, 5917757 - 5917714
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtctt 262  Q
    ||||||||||||||| |||||| |||| ||||||||||||||||    
T  5917757 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtctt 5917714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 125
Target Start/End: Complemental strand, 8443789 - 8443743
Alignment:
Q  78 ttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt 125  Q
    ||||||||| ||||||||||||| ||| ||||||||||||||||||||    
T  8443789 ttctttctctttcattcatcaag-aggggtggttttaggtcatttttt 8443743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 83 - 134
Target Start/End: Original strand, 8826033 - 8826084
Alignment:
Q  83 tctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    |||| |||| ||||| |||| | |||||||||||||||||||||||||||||    
T  8826033 tctctttcactcatcgaggatgggtggttttaggtcattttttgatctagaa 8826084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 125
Target Start/End: Original strand, 41684221 - 41684300
Alignment:
Q  46 tagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt 125  Q
    |||||||||||||||||||||| ||  |  | ||||||||||||||||||| ||||    |||||||||||||| |||||    
T  41684221 tagtgagagaaactccaacttccctttaggctttctttctccttcattcataaagggtaagtggttttaggtcagttttt 41684300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 284
Target Start/End: Complemental strand, 27110588 - 27110526
Alignment:
Q  222 atttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    |||||||| ||||| ||| ||||| ||||| | |||||||||||  |||||||||||||||||    
T  27110588 atttcgtcatctaattgcagcgttgtgttggtagtcgtcttgtgtggcgtttgattttgcgtc 27110526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 284
Target Start/End: Complemental strand, 27498487 - 27498425
Alignment:
Q  222 atttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||||||||| | | || ||||||||||||||||||||  | |||||||| |||||    
T  27498487 atttcgtcgtctaagtgtgccattgtgttgttcgtcgtcttgtgcgacatttgatttcgcgtc 27498425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 117
Target Start/End: Complemental strand, 27498635 - 27498565
Alignment:
Q  47 agtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggt 117  Q
    ||||||||||||| |||||| |||  || | |||||||||||||||||||| | |||| | ||||||||||    
T  27498635 agtgagagaaacttcaacttatctttaagctttctttctccttcattcatcgatgaggggcggttttaggt 27498565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 36948742 - 36948688
Alignment:
Q  42 tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcat 96  Q
    |||||||||||| ||||| ||||||||||  |||| |||||||||||| ||||||    
T  36948742 tttttagtgagacaaacttcaacttctctttaaactttctttctcctttattcat 36948688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 266
Target Start/End: Original strand, 5333391 - 5333436
Alignment:
Q  221 gatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgc 266  Q
    ||||||||| ||| ||||||| ||| ||||||||||||||||||||    
T  5333391 gatttcgtcatctgagtgcggtgttgtgttgttcgtcgtcttgtgc 5333436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 260
Target Start/End: Complemental strand, 24099384 - 24099343
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtc 260  Q
    ||||||||||||||| |||||| |||| ||||||||||||||    
T  24099384 gtgatttcgtcgtctgagtgcgacgttgtgttgttcgtcgtc 24099343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 284
Target Start/End: Complemental strand, 36948559 - 36948498
Alignment:
Q  223 tttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    |||| |||||||||||  ||||| ||||||| |||||| ||||| ||||||||||| |||||    
T  36948559 tttcatcgtctaagtgttgcgttgtgttgtttgtcgtcctgtgcggcgtttgatttcgcgtc 36948498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 290
Target Start/End: Original strand, 34611789 - 34611863
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagc---gtttgattttgcgtcgtcgtg 290  Q
    |||||||| || |||||||| || | | |||||||||||||||||||| ||   |||||||||| ||||||||||    
T  34611789 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcgtcgtg 34611863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 41060534 - 41060482
Alignment:
Q  38 taattttttagtgagagaaactccaacttctctcaaaaccttctttctccttc 90  Q
    |||||||||||||||||||||| || | |||||| |||  |||||||||||||    
T  41060534 taattttttagtgagagaaacttcatcatctctctaaaatttctttctccttc 41060482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 9e-30; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 29 - 147
Target Start/End: Original strand, 12170265 - 12170383
Alignment:
Q  29 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat 128  Q
    |||||| |||| |||| |||||||||||||||||||||||||| | || ||||||||||||| |||||| |||||| ||||||||||||||||||||||     
T  12170265 agccggccctagttttctagtgagagaaactccaacttctctctagactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgac 12170364  T
Q  129 ctagaactagccctctaca 147  Q
    ||||||  | |||||||||    
T  12170365 ctagaatcacccctctaca 12170383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 36 - 147
Target Start/End: Complemental strand, 33053481 - 33053370
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 135  Q
    |||| |||| ||||| |||||||||||||||||||| |||| ||||||||||||| |||||| |||||| |||||||||||||||||||||| ||||||     
T  33053481 cctagttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaat 33053382  T
Q  136 tagccctctaca 147  Q
     | |||||||||    
T  33053381 catccctctaca 33053370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 36 - 134
Target Start/End: Complemental strand, 3913886 - 3913789
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    |||| |||| |||||||||||||||||||||||||| |||| ||||||||||||  |||||| |||||| |||||||||||||||||||||| ||||||    
T  3913886 cctagttttctagtgagagaaactccaacttctctctaaactttctttctcctttgttcatcgaggagg-gtggttttaggtcattttttgacctagaa 3913789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 33053296 - 33053232
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgt 283  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||    
T  33053296 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgt 33053232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 68320 - 68225
Alignment:
Q  29 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt 124  Q
    |||||| |||| |||||||||  |||||||||||||||||||| |||| ||||||||||||| |||||| ||||||  ||||||||||| ||||||    
T  68320 agccggccctagttttttagtaggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggagggatggttttaggtaattttt 68225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 222 - 284
Target Start/End: Complemental strand, 3913699 - 3913637
Alignment:
Q  222 atttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||    
T  3913699 atttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcaacgtttgatttcgcgtc 3913637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 37 - 125
Target Start/End: Complemental strand, 24228024 - 24227936
Alignment:
Q  37 ctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt 125  Q
    ||||||||||| || | ||||||||||||| |||| || | || ||||| |||||||||||||||||| ||||||||||||||||||||    
T  24228024 ctaattttttaatgggcgaaactccaacttttctccaagctttatttcttcttcattcatcaaggaggagtggttttaggtcatttttt 24227936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 605986 - 606077
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctag 132  Q
    |||| ||||| ||||||||||||||| |||| |||| ||||||||||||| |||||| |||||| ||| ||||| |||||||||||| ||||    
T  605986 ttttctagtgggagaaactccaacttttctctaaactttctttctccttcgttcatcgaggaggggtgattttatgtcattttttgacctag 606077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 606166 - 606225
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||    
T  606166 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcatcttgtgcggcgtttgattt 606225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 131
Target Start/End: Complemental strand, 29255755 - 29255660
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatcta 131  Q
    ||||| ||| |||||||||||| ||||||||||||| ||||  |||||||||||| |||||| | ||| |||||||||| |||||| |||||||||    
T  29255755 cctaactttctagtgagagaaattccaacttctctccaaactctctttctccttcgttcatcgaagagatgtggttttatgtcattctttgatcta 29255660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 147
Target Start/End: Complemental strand, 29320173 - 29320064
Alignment:
Q  41 ttttttagtgagagaaactcc---aacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaacta 137  Q
    ||||||| |||||||||||||   |||||||||  |||| ||||||||||||| |||||| |||| | ||||||||||||||| |||||||||||||  |    
T  29320173 ttttttaatgagagaaactcctccaacttctctttaaactttctttctccttcgttcatcgaggatgggtggttttaggtcatattttgatctagaatca 29320074  T
Q  138 gccctctaca 147  Q
     |||||||||    
T  29320073 cccctctaca 29320064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 127
Target Start/End: Complemental strand, 32328896 - 32328805
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    |||| |||| ||||||||||||||| |||||||||| | || ||||||||||||| |||||| |||||| ||||||||| |||| |||||||    
T  32328896 cctagttttctagtgagagaaactctaacttctctctatactttctttctccttcgttcatcgaggaggggtggttttaagtcagtttttga 32328805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 29 - 147
Target Start/End: Original strand, 23128388 - 23128506
Alignment:
Q  29 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat 128  Q
    ||||||| ||| | || ||||| ||||||||| |||||||||| |||| ||||||||||||| |||||  ||||||  | |||||||||||||||||||     
T  23128388 agccggttctagtattctagtgggagaaactctaacttctctctaaactttctttctccttcgttcattgaggagggatagttttaggtcattttttgac 23128487  T
Q  129 ctagaactagccctctaca 147  Q
    ||||||  | |||||||||    
T  23128488 ctagaatcacccctctaca 23128506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 7515330 - 7515265
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||  |||||||||| |||||    
T  7515330 gtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgggcgacgtttgatttcgcgtc 7515265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 41 - 125
Target Start/End: Complemental strand, 9723687 - 9723602
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatca-aggaggtgtggttttaggtcatttttt 125  Q
    |||| |||||| ||||||||||||||||||| |||| ||||||||| ||| ||||||| |||||| ||||||||||||| ||||||    
T  9723687 ttttctagtgaaagaaactccaacttctctctaaactttctttctcgttcgttcatcagaggaggggtggttttaggtcttttttt 9723602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 32327345 - 32327280
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    |||||||| | |||||||||||||||| |||||||||||||||||||| ||||||||||| |||||    
T  32327345 gtgatttcatagtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtc 32327280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 283
Target Start/End: Original strand, 23128580 - 23128644
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgt 283  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||  ||||||||||| ||||    
T  23128580 gtgatttcatcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgtggcgtttgatttcgcgt 23128644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 147
Target Start/End: Original strand, 30894427 - 30894524
Alignment:
Q  49 tgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctaca 147  Q
    ||||||||||| ||||||||||| |||| || |||||||||| || ||| |||||| |||||||||| ||||||||||| ||||||  | |||||||||    
T  30894427 tgagagaaacttcaacttctctctaaacttt-tttctccttcgttaatcgaggaggggtggttttagatcattttttgacctagaatcacccctctaca 30894524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 29 - 98
Target Start/End: Complemental strand, 9721830 - 9721761
Alignment:
Q  29 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatca 98  Q
    |||||| | ||||||| |||||||||||||||||||||||||| |||| ||||||||| ||| |||||||    
T  9721830 agccggccataattttctagtgagagaaactccaacttctctctaaactttctttctcgttcgttcatca 9721761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 29320006 - 29319941
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||| ||||||||||||||||||| ||||||||||| |||| ||| ||||||||||| |||||    
T  29320006 gtgattttgtcgtctaagtgcggcgttgtgttgttcgtcctcttatgcggcgtttgatttcgcgtc 29319941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 30608643 - 30608578
Alignment:
Q  219 gtgatttcgtcgtctaagtg-cggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgt 283  Q
    |||||||||||||||||||  || |||| |||||||||||||||||||| ||||||||||||||||    
T  30608643 gtgatttcgtcgtctaagttacgtcgttgtgttgttcgtcgtcttgtgcggcgtttgattttgcgt 30608578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 78 - 131
Target Start/End: Complemental strand, 32192003 - 32191950
Alignment:
Q  78 ttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatcta 131  Q
    ||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||    
T  32192003 ttctttctctttcattcatcaaggaggggtggttttaggtccttttttgatcta 32191950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 13546788 - 13546728
Alignment:
Q  222 atttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcg 282  Q
    |||||||||| | ||||||||||| |||||||||||||||| ||| |||||||||||||||    
T  13546788 atttcgtcgtttgagtgcggcgttgtgttgttcgtcgtcttatgcggcgtttgattttgcg 13546728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 134
Target Start/End: Original strand, 32059688 - 32059784
Alignment:
Q  38 taattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    ||||||| |||||||||||| ||||| ||||||  |||| ||||||||| |||||||||| ||||   ||||||||| |||||| ||||| ||||||    
T  32059688 taattttctagtgagagaaattccaagttctctttaaacattctttctctttcattcatcgaggataggtggttttaagtcattgtttgacctagaa 32059784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 125
Target Start/End: Complemental strand, 7515509 - 7515426
Alignment:
Q  42 tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt 125  Q
    ||||||| ||||||| |||||||||||||| |||| | ||||||| ||| |||||| |||||| |||||||||| | |||||||    
T  7515509 tttttagagagagaagctccaacttctctctaaacttgctttctctttcgttcatcgaggaggggtggttttagattatttttt 7515426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 32059871 - 32059930
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    |||||||| ||||||||||| | |||| |||||||||||||||||||| |||||||||||    
T  32059871 gtgatttcttcgtctaagtgtgacgttgtgttgttcgtcgtcttgtgcggcgtttgattt 32059930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 34018522 - 34018581
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||   ||||||||||    
T  34018522 gtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgagacgtttgattt 34018581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 219 - 265
Target Start/End: Original strand, 127632 - 127678
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtg 265  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||    
T  127632 gtgatttcgtcgtctaagtgcagcgttgtgttgttcgtcgtcttgtg 127678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 20220856 - 20220905
Alignment:
Q  235 agtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||| |||||||||||||||||||| ||||||||||| |||||    
T  20220856 agtgcggcgttttgttgttcgtcgtcttgtgcggcgtttgatttcgcgtc 20220905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 22114840 - 22114889
Alignment:
Q  235 agtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||| |||||||||||||||||||| ||||||||||| |||||    
T  22114840 agtgcggcgttttgttgttcgtcgtcttgtgcggcgtttgatttcgcgtc 22114889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 30493491 - 30493544
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    |||||||| |||||| ||||||| ||| ||||||||||||||||||||||||||    
T  30493491 gtgatttcctcgtctgagtgcggtgttgtgttgttcgtcgtcttgtgcagcgtt 30493544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 266
Target Start/End: Original strand, 1523363 - 1523410
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgc 266  Q
    ||||||||||||||| |||||| |||| ||||||||||||||||||||    
T  1523363 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgc 1523410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 273
Target Start/End: Complemental strand, 7976308 - 7976254
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgttt 273  Q
    ||||||||||||||| ||||||  ||| |||||||||||||||||||| ||||||    
T  7976308 gtgatttcgtcgtctgagtgcgttgttgtgttgttcgtcgtcttgtgcggcgttt 7976254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 98
Target Start/End: Complemental strand, 9719693 - 9719643
Alignment:
Q  48 gtgagagaaactccaacttctctcaaaaccttctttctccttcattcatca 98  Q
    |||||||||||||||||||||||| |||| ||||||||| ||| |||||||    
T  9719693 gtgagagaaactccaacttctctctaaactttctttctcgttcgttcatca 9719643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 30776627 - 30776680
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    ||||||||||||||| |||||| |||| ||||||||||| |||||||| |||||    
T  30776627 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcatcttgtgcggcgtt 30776680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 68129 - 68065
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgt 283  Q
    |||||||||||||||||||| || ||| |||| |||  |||||||||| ||||||||||| ||||    
T  68129 gtgatttcgtcgtctaagtgtggtgttgtgttattcaccgtcttgtgcggcgtttgatttcgcgt 68065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 284
Target Start/End: Original strand, 3355080 - 3355144
Alignment:
Q  220 tgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||| |||||||||||||| ||| ||||||||||| |||||||   |||||||||| |||||    
T  3355080 tgatttcatcgtctaagtgcggtgttgtgttgttcgtcctcttgtgtgacgtttgatttcgcgtc 3355144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 134
Target Start/End: Complemental strand, 4010807 - 4010715
Alignment:
Q  42 tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    |||||||||||||||||| || |||||||| ||   |||||||||||| ||| ||  |||||| |||  ||||| ||||||||||| ||||||    
T  4010807 tttttagtgagagaaacttcatcttctctctaagttttctttctcctttatttattgaggaggagtgactttagatcattttttgacctagaa 4010715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 278
Target Start/End: Complemental strand, 29255570 - 29255514
Alignment:
Q  222 atttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    |||| |||| |||||||  ||||| ||||||||||||||||||||| ||||||||||    
T  29255570 attttgtcgactaagtgtagcgttgtgttgttcgtcgtcttgtgcaacgtttgattt 29255514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 31852316 - 31852272
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttg 263  Q
    ||||||||||||||| |||||| |||| |||||||||||||||||    
T  31852316 gtgatttcgtcgtctgagtgcgacgttgtgttgttcgtcgtcttg 31852272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 34018348 - 34018448
Alignment:
Q  47 agtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctac 146  Q
    |||||||||| || ||| || | || |||| ||||||||||||| |||||| |||| |   |||||||||||||||||||| ||||||  | ||||||||    
T  34018348 agtgagagaagcttcaatttttgtctaaactttctttctccttcgttcatcgaggatggaaggttttaggtcattttttgacctagaatcacccctctac 34018447  T
Q  147 a 147  Q
    |    
T  34018448 a 34018448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 266
Target Start/End: Original strand, 14801782 - 14801829
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgc 266  Q
    ||||||||||||||| |||||| | || ||||||||||||||||||||    
T  14801782 gtgatttcgtcgtcttagtgcgacattgtgttgttcgtcgtcttgtgc 14801829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 134
Target Start/End: Original strand, 1523185 - 1523283
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    ||||||||| ||||||||||||||| |  ||||||| ||   || |||||| ||||  ||| ||||||| ||| |||||||||| ||||||| ||||||    
T  1523185 cctaattttatagtgagagaaactctacattctctctaagttttatttctctttcacacatgaaggaggggtgattttaggtcaatttttgacctagaa 1523283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 265
Target Start/End: Complemental strand, 32191859 - 32191813
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtg 265  Q
    ||||||| ||||||||||||||||||| |||||||||| | ||||||    
T  32191859 gtgattttgtcgtctaagtgcggcgttgtgttgttcgttgacttgtg 32191813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 284
Target Start/End: Complemental strand, 4010611 - 4010574
Alignment:
Q  247 tgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  4010611 tgttgttcgtcgtcttgtgcatcatttgattttgcgtc 4010574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 8102681 - 8102734
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    ||||||||||||||| |||||  |||| |||| ||||||||||||||| |||||    
T  8102681 gtgatttcgtcgtcttagtgcaacgttgtgtttttcgtcgtcttgtgcggcgtt 8102734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 125
Target Start/End: Complemental strand, 27097918 - 27097834
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt 125  Q
    ||||||||||||||||||| ||  ||||||| ||   ||||||||| |||| ||||  |||| | ||||||||||||| ||||||    
T  27097918 ttttttagtgagagaaacttcacattctctctaagttttctttctctttcactcattcaggaagagtggttttaggtcttttttt 27097834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 9e-30; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 29 - 127
Target Start/End: Original strand, 7035996 - 7036094
Alignment:
Q  29 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    |||||| |||| |||| ||||||||||||||| |||||||||| |||| |||||||||||||||||||||||| || ||||||||||||||||||||||    
T  7035996 agccggccctagttttctagtgagagaaactcaaacttctctctaaactttctttctccttcattcatcaaggtggggtggttttaggtcattttttga 7036094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 29 - 147
Target Start/End: Original strand, 13006997 - 13007115
Alignment:
Q  29 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat 128  Q
    |||||| |||| |||||||||| |||||||||||||||||||| |||| ||||||||||||| |||||| |||||  ||||||||||||||||||||||     
T  13006997 agccggccctagttttttagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggagaggtggttttaggtcattttttgac 13007096  T
Q  129 ctagaactagccctctaca 147  Q
    ||||||  | |||||||||    
T  13007097 ctagaatcacccctctaca 13007115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 29 - 147
Target Start/End: Original strand, 38597566 - 38597684
Alignment:
Q  29 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat 128  Q
    |||||| |||| |||| |||||||||||||||||||||||||| |||| ||||||||||||| |||||| |||||| |||||||||||| |||||||||     
T  38597566 agccggccctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggttattttttgac 38597665  T
Q  129 ctagaactagccctctaca 147  Q
    ||||||  | |||||||||    
T  38597666 ctagaatcacccctctaca 38597684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 41 - 127
Target Start/End: Complemental strand, 6012446 - 6012360
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    |||||||||| |||||||||||||||||||| |||| ||||||||||||| |||||  |||||| ||||||||||||||||||||||    
T  6012446 ttttttagtgggagaaactccaacttctctctaaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttga 6012360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 9113853 - 9113794
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  9113853 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcggcgtttgattt 9113794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 219 - 280
Target Start/End: Original strand, 13007189 - 13007250
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttg 280  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  13007189 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgattttg 13007250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 46 - 127
Target Start/End: Original strand, 38007143 - 38007224
Alignment:
Q  46 tagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    ||||||||||||||| | |||||||| |||| ||||||||||||| |||||| |||||| ||||||||||||||||||||||    
T  38007143 tagtgagagaaactcaatcttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttga 38007224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 38597757 - 38597822
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||    
T  38597757 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtc 38597822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 36 - 127
Target Start/End: Original strand, 25979933 - 25980024
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    |||| |||| ||||||| |||||||||||||||||| |||| ||||||||||||| |||||| |||| | ||||||| ||||||||||||||    
T  25979933 cctagttttctagtgagcgaaactccaacttctctctaaactttctttctccttcgttcatcgaggatgggtggtttcaggtcattttttga 25980024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 47 - 134
Target Start/End: Complemental strand, 26878380 - 26878294
Alignment:
Q  47 agtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    ||||||||||||| ||||||||||| |||| |||||||||||||||||||| |||||  ||||||||| |||| ||||||||||||||    
T  26878380 agtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggagaggtggttttatgtca-tttttgatctagaa 26878294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 41 - 147
Target Start/End: Complemental strand, 31392065 - 31391959
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 140  Q
    |||| |||||||| ||| || |||||||||| |||| |||||||||| || |||||| |||||| |||||||||||||||||||||| ||||||  | ||    
T  31392065 ttttctagtgagaaaaattctaacttctctctaaactttctttctccatcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcaccc 31391966  T
Q  141 ctctaca 147  Q
    |||||||    
T  31391965 ctctaca 31391959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 125
Target Start/End: Original strand, 26825204 - 26825293
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt 125  Q
    |||| |||| ||||| |||||||||||| ||||||| |||| ||||||||||||| |||||| |||||| ||||||||||||| ||||||    
T  26825204 cctagttttctagtgggagaaactccaatttctctctaaactttctttctccttctttcatcgaggaggggtggttttaggtcttttttt 26825293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 134
Target Start/End: Original strand, 34945204 - 34945295
Alignment:
Q  43 ttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    |||||||| |||||||||||| ||||||| |||| ||||||||||||| |||||| | || |  ||||||||||||||||||||| ||||||    
T  34945204 ttttagtgggagaaactccaaattctctctaaactttctttctccttcgttcatcgaagaaggatggttttaggtcattttttgacctagaa 34945295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 36 - 125
Target Start/End: Original strand, 15571261 - 15571350
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt 125  Q
    |||| |||| ||||||||||||||| |||||||||| || | |||||||||||||||||||| |||||   |||||||| ||||||||||    
T  15571261 cctagttttctagtgagagaaactctaacttctctccaagctttctttctccttcattcatcgaggagaaatggttttatgtcatttttt 15571350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 6012266 - 6012202
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgt 283  Q
    |||||||| |||||||||||||| ||| |||||||||||||||||||| ||||||||||| ||||    
T  6012266 gtgatttcatcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgt 6012202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 134
Target Start/End: Original strand, 7929979 - 7930068
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    |||| |||||||||||||||||| ||||||| |||| ||||||||||    ||||||||||||| ||| |||||||||| ||||||| ||||||    
T  7929979 ttttctagtgagagaaactccaaattctctctaaactttctttctcc----ttcatcaaggaggggtgattttaggtcaatttttgacctagaa 7930068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 283
Target Start/End: Original strand, 26825390 - 26825454
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgt 283  Q
    ||||||||||| ||||||||||||||| ||||||||||| |||||||| ||||||||||| ||||    
T  26825390 gtgatttcgtcttctaagtgcggcgttgtgttgttcgtcttcttgtgcggcgtttgatttcgcgt 26825454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 283
Target Start/End: Original strand, 35850759 - 35850823
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgt 283  Q
    ||||||||||||||||||| || |||| |||||||||||||||||||| ||||||||||| ||||    
T  35850759 gtgatttcgtcgtctaagtacgacgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgt 35850823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 6216859 - 6216918
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||| || ||||||||    
T  6216859 gtgatttcgtcgtctaaatgcggcgttatgttgttcgtcgtcttgtgcggcatttgattt 6216918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 52 - 147
Target Start/End: Complemental strand, 9114022 - 9113927
Alignment:
Q  52 gagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctaca 147  Q
    ||||||||| |||||||||| |||| ||||||||| ||| |||||| |||||| ||| |||||||||||||||| | ||||||  | |||||||||    
T  9114022 gagaaactctaacttctctctaaactttctttctctttcgttcatcgaggaggggtgattttaggtcattttttaacctagaatcacccctctaca 9113927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 36 - 115
Target Start/End: Complemental strand, 11977250 - 11977171
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttag 115  Q
    |||| |||| ||||||||||||||| |||||||||| |||| ||||||||||||| |||||| || ||| ||||||||||    
T  11977250 cctagttttctagtgagagaaactctaacttctctctaaactttctttctccttcgttcatcgagaaggggtggttttag 11977171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 11074028 - 11073963
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    |||||||||| |||||||||| ||||| | |||||||||||||||||| ||||||||||| |||||    
T  11074028 gtgatttcgttgtctaagtgcagcgttgttttgttcgtcgtcttgtgcggcgtttgatttcgcgtc 11073963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 14726589 - 14726524
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||   ||||||||| |||||    
T  14726589 gtgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcgatgtttgatttcgcgtc 14726524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 24229912 - 24229847
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||   |||||||||| |||||    
T  24229912 gtgatttcgtcatctaagtgcggcgttttgttgttcgtcgtcttgtgtgacgtttgatttcgcgtc 24229847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 14082501 - 14082442
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    |||||||| ||||||||||| |||||| |||||||||||||||||| | |||||||||||    
T  14082501 gtgatttcatcgtctaagtgtggcgttgtgttgttcgtcgtcttgtacggcgtttgattt 14082442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 31391881 - 31391822
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    |||||||||||||||||||||| |||| |||||||| ||||||||||| || ||||||||    
T  31391881 gtgatttcgtcgtctaagtgcgacgttgtgttgttcttcgtcttgtgcggcatttgattt 31391822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 2979441 - 2979388
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    ||||||||||||||| |||||| |||| |||||||||||||||||||| |||||    
T  2979441 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgtt 2979388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 6216676 - 6216761
Alignment:
Q  43 ttttagtgagagaaactccaa-cttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    |||||||||||||||||| || |||||||| |||| || |||||| ||| |||||| |||| | |||||||||||||||| |||||    
T  6216676 ttttagtgagagaaactcaaaacttctctctaaactttatttctcattcgttcatcgaggatgggtggttttaggtcattctttga 6216761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 11977063 - 11976998
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    |||||||||||||||||||| |||||| | |||||||||||||||| |  |||||||||| |||||    
T  11977063 gtgatttcgtcgtctaagtgtggcgttgtattgttcgtcgtcttgtacgacgtttgatttcgcgtc 11976998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 117
Target Start/End: Complemental strand, 24230107 - 24230018
Alignment:
Q  29 agccggtcctaattttttagtgagagaaactccaacttctctc-aaaaccttctttctccttcattcatcaaggaggtgtggttttaggt 117  Q
    |||||| |||| |||| |||||||||||||||||||||||||| ||||| |||||| | |||| |||||| |||||  | ||||||||||    
T  24230107 agccggccctagttttctagtgagagaaactccaacttctctctaaaactttctttgttcttcgttcatcgaggagtggaggttttaggt 24230018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 284
Target Start/End: Original strand, 25980122 - 25980183
Alignment:
Q  223 tttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    |||||||||||||||||||  || |||||||||||||||||||| |||||| |||| |||||    
T  25980122 tttcgtcgtctaagtgcggtattgtgttgttcgtcgtcttgtgcggcgtttaatttcgcgtc 25980183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 7930148 - 7930196
Alignment:
Q  230 gtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    |||||||||||||||| ||||||||||||||||||||  ||||||||||    
T  7930148 gtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgtcgtttgattt 7930196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 124
Target Start/End: Complemental strand, 11074199 - 11074124
Alignment:
Q  50 gagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggag-gtgtggttttaggtcattttt 124  Q
    ||||||||||||||||| |||| |||| |||||||||| || |||||| ||||| | |||||||||||| ||||||    
T  11074199 gagagaaactccaacttttctctaaactttctttctccctcgttcatcgaggagagggtggttttaggttattttt 11074124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 258
Target Start/End: Original strand, 28386895 - 28386934
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcg 258  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  28386895 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcg 28386934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 134
Target Start/End: Original strand, 14211009 - 14211106
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    |||||||||||||||||||||||||   |||||||| ||   ||||| ||| |||| ||||| |||||| ||| |||||||||| ||||||| ||||||    
T  14211009 cctaattttttagtgagagaaactctgtcttctctctaagttttcttcctctttcactcatcgaggagg-gtgattttaggtcaatttttgacctagaa 14211106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 134
Target Start/End: Original strand, 39567071 - 39567169
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    ||||||||||||||||||||||| ||  |||||||  ||   ||||| ||| |||| ||||| |||||| ||| |||||||||| ||||||| ||||||    
T  39567071 cctaattttttagtgagagaaacaccgtcttctctttaagttttcttcctctttcactcatcgaggaggggtgattttaggtcaatttttgacctagaa 39567169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 8096625 - 8096560
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    |||||||| |||||||||||||||||| |||||||||| || ||| || || |||||||| |||||    
T  8096625 gtgatttcatcgtctaagtgcggcgttgtgttgttcgttgttttgagcggcatttgatttcgcgtc 8096560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 11867628 - 11867693
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||||||||| ||| | ||| ||||||| |||||||||| | ||||||||||| |||||    
T  11867628 gtgatttcgtcgtctaattgcagtgttgtgttgttagtcgtcttgtacggcgtttgatttcgcgtc 11867693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 14211180 - 14211233
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    ||||||||||||||| |||||| | || |||||||||||||||||||| |||||    
T  14211180 gtgatttcgtcgtcttagtgcgacattgtgttgttcgtcgtcttgtgcggcgtt 14211233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 19103602 - 19103549
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    ||||||||||||||| |||||| |||| ||||||| |||||||||||| |||||    
T  19103602 gtgatttcgtcgtcttagtgcgacgttgtgttgttagtcgtcttgtgcggcgtt 19103549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 28541041 - 28540988
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    |||||||| |||||| |||||| |||| |||||||||||||||||||| |||||    
T  28541041 gtgatttcatcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgtt 28540988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 13421711 - 13421779
Alignment:
Q  29 agccggtcctaattttt-tagtgagagaaactccaacttctctcaaaaccttctttctccttcattcat 96  Q
    ||||| ||||| ||||| |||||||||||||| ||||||||||  |||| |||||||| ||||||||||    
T  13421711 agccgatcctagtttttctagtgagagaaacttcaacttctctttaaactttctttcttcttcattcat 13421779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 134
Target Start/End: Original strand, 35850574 - 35850657
Alignment:
Q  50 gagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    |||||||| ||||| ||||||| |||| || |||||| ||| || ||| |||||| ||||||||||||| |||||||| ||||||    
T  35850574 gagagaaagtccaatttctctctaaactttatttctcattcgtttatcgaggaggggtggttttaggtc-ttttttgacctagaa 35850657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 41630286 - 41630342
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcat 92  Q
    |||||||||| ||||||||||||| ||||||||||| || | ||||||||| |||||    
T  41630286 cctaatttttcagtgagagaaacttcaacttctctctaagctttctttctcattcat 41630342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 278
Target Start/End: Complemental strand, 37986225 - 37986182
Alignment:
Q  235 agtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    ||||||||||| |||||||| ||||||||||| |||||||||||    
T  37986225 agtgcggcgttgtgttgttcatcgtcttgtgcggcgtttgattt 37986182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 38007318 - 38007377
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    ||||||||||||||||||| || | || || ||||| ||||||||||| |||||||||||    
T  38007318 gtgatttcgtcgtctaagtacgacattgtgctgttcatcgtcttgtgcggcgtttgattt 38007377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 8985257 - 8985215
Alignment:
Q  29 agccggtcctaattttttagtgagagaaactccaacttctctc 71  Q
    |||||| ||||  ||||||||||||||||||||||||||||||    
T  8985257 agccggccctagctttttagtgagagaaactccaacttctctc 8985215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 115
Target Start/End: Original strand, 4770927 - 4770992
Alignment:
Q  50 gagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttag 115  Q
    ||||||||||| |||||||||| |||| |||||||| |||| || ||| |||||| ||| ||||||    
T  4770927 gagagaaactctaacttctctctaaactttctttcttcttcgttaatcgaggaggggtgattttag 4770992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 7036179 - 7036244
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||||||| | ||||||||  ||||  | |||||||||||| ||||||||||| |||||    
T  7036179 gtgatttcgtcgtctgattgcggcgtggtgttagtggtcgtcttgtgcggcgtttgatttcgcgtc 7036244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 19281044 - 19280991
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    |||||||| || |||||||| || | | ||||||||||||||||||||||||||    
T  19281044 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcagcgtt 19280991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 133
Target Start/End: Complemental strand, 28541219 - 28541122
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctaga 133  Q
    |||| ||||||||||||||||||||   |||||||| ||   ||||| ||| |||| ||||| ||| || ||| |||||||||| ||||||| |||||    
T  28541219 cctatttttttagtgagagaaactctttcttctctctaagttttcttcctctttcactcatcgaggtggggtgattttaggtcaatttttgacctaga 28541122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 9e-30; HSPs: 86)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 41 - 147
Target Start/End: Original strand, 2520578 - 2520684
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 140  Q
    |||| |||||||||||||||||||||||||| |||| ||||||||||||| |||||| |||||| |||||||||||||||||||||| ||||||  | ||    
T  2520578 ttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcaccc 2520677  T
Q  141 ctctaca 147  Q
    |||||||    
T  2520678 ctctaca 2520684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 40 - 134
Target Start/End: Complemental strand, 26091222 - 26091128
Alignment:
Q  40 attttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| | ||| |||||||| ||||||||| ||||||    
T  26091222 attttttagtgagagaaactccaacttctctctaaaccttctttctccttcattcatcgaggatgagtgattttaggttattttttgacctagaa 26091128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 29 - 134
Target Start/End: Complemental strand, 26633990 - 26633885
Alignment:
Q  29 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat 128  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||| |||| |||||  |||||| ||||| ||||||||||||||||     
T  26633990 agccggtcctagttttttagtgagagaaactccaacttctctctaaactttctttcttcttcgttcattgaggaggggtggtcttaggtcattttttgac 26633891  T
Q  129 ctagaa 134  Q
    ||||||    
T  26633890 ctagaa 26633885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 22610972 - 22611068
Alignment:
Q  28 gagccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt 124  Q
    ||||||| |||| |||||||||| |||||||||||||||||||| |||| ||||||||||||| ||| || |||||| |||||||||||||||||||    
T  22610972 gagccggccctagttttttagtgggagaaactccaacttctctctaaactttctttctccttcgttcgtcgaggaggggtggttttaggtcattttt 22611068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 36 - 147
Target Start/End: Complemental strand, 4143067 - 4142956
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 135  Q
    |||| |||||||||| |||||||||||||||||||  |||| ||||||||||||  |||||| |||||| |||||||||||||||||||||| ||||||     
T  4143067 cctagttttttagtgggagaaactccaacttctctataaactttctttctcctttgttcatcgaggaggggtggttttaggtcattttttgacctagaat 4142968  T
Q  136 tagccctctaca 147  Q
     | |||||||||    
T  4142967 cacccctctaca 4142956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 41 - 134
Target Start/End: Original strand, 10496143 - 10496236
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    |||| ||||||||||||||||||||||| || |||| ||||| ||||||| |||||| ||||||||||||||||||||| ||||||| ||||||    
T  10496143 ttttctagtgagagaaactccaacttctttctaaactttcttactccttcgttcatcgaggaggtgtggttttaggtcaatttttgacctagaa 10496236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 19853824 - 19853736
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt 124  Q
    |||| |||| ||||| |||||||||||||||||||| |||| ||||||| |||||||||||| |||||| |||||||||||||||||||    
T  19853824 cctagttttctagtgggagaaactccaacttctctctaaactttctttccccttcattcatcgaggaggggtggttttaggtcattttt 19853736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 219 - 283
Target Start/End: Original strand, 22611164 - 22611228
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgt 283  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  22611164 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgattttgcgt 22611228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 42 - 127
Target Start/End: Complemental strand, 22558772 - 22558687
Alignment:
Q  42 tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    ||||||| |||||||||||||| ||||||| |||| ||||||||||||| |||||  |||||| ||||||||||||||||||||||    
T  22558772 tttttagagagagaaactccaatttctctctaaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttga 22558687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 13633910 - 13633998
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt 124  Q
    |||| |||| |||||||||||||||||||||||||| |||| |||||||||||||  ||||| |||||  |||||||||||||||||||    
T  13633910 cctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgctcatcgaggagtggtggttttaggtcattttt 13633998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 56156870 - 56156782
Alignment:
Q  32 cggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcat 120  Q
    |||||||| ||||||| ||||||||||||||||||||||| |||| ||||||||  ||| ||||||||||| | |||||||||||||||    
T  56156870 cggtcctagttttttattgagagaaactccaacttctctctaaactttctttcttattcgttcatcaaggatgggtggttttaggtcat 56156782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 35348288 - 35348347
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  35348288 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgattt 35348347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 36 - 127
Target Start/End: Original strand, 53810824 - 53810915
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    |||| |||| ||||| ||||||||||| |||||||| |||| ||||| ||||||| |||||| |||||| ||||||||||||||||||||||    
T  53810824 cctagttttctagtgggagaaactccagcttctctctaaactttcttcctccttcgttcatcgaggaggggtggttttaggtcattttttga 53810915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 48 - 134
Target Start/End: Original strand, 9178165 - 9178251
Alignment:
Q  48 gtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    |||||||||||| ||  ||||||| |||  ||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||    
T  9178165 gtgagagaaacttcagtttctctctaaaatttctttctccttcattcatcaaggaggggtggtcttaggtcattttttgacctagaa 9178251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 41 - 127
Target Start/End: Original strand, 54021662 - 54021748
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    ||||||||||||||||||| ||| ||||||| |||| |||||||| ||||||||||| |||  | ||||||||||||||||||||||    
T  54021662 ttttttagtgagagaaacttcaatttctctctaaactttctttcttcttcattcatcgagggagagtggttttaggtcattttttga 54021748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 11300119 - 11300054
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||| |||||    
T  11300119 gtgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcaacgtttgatttcgcgtc 11300054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 56040774 - 56040709
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||| |||||| ||||||||||    
T  56040774 gtgatttcgtcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtttaattttgcgtc 56040709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 17949452 - 17949388
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgt 283  Q
    ||||||||||||||||||||||||||| ||||||| ||||| |||||| ||||||||||||||||    
T  17949452 gtgatttcgtcgtctaagtgcggcgttgtgttgtttgtcgtgttgtgcggcgtttgattttgcgt 17949388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 17953304 - 17953240
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgt 283  Q
    ||||||||||||||||||||||||||| ||||||| ||||| |||||| ||||||||||||||||    
T  17953304 gtgatttcgtcgtctaagtgcggcgttgtgttgtttgtcgtgttgtgcggcgtttgattttgcgt 17953240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 31 - 127
Target Start/End: Original strand, 22300636 - 22300732
Alignment:
Q  31 ccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    |||| |||| |||||||| |||||||||||||||||||||| |||  || |||||| |||| || || |||||| ||||||||||||||||||||||    
T  22300636 ccggccctagttttttagagagagaaactccaacttctctctaaattttatttctctttcactcgtcgaggaggagtggttttaggtcattttttga 22300732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 283
Target Start/End: Original strand, 32766495 - 32766559
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgt 283  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||| ||||    
T  32766495 gtgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgt 32766559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 125
Target Start/End: Original strand, 5119120 - 5119223
Alignment:
Q  22 aatcttgagccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatt 121  Q
    ||||||| | ||| |||| |||| |||||||| ||| | |||||||| || |||| || |||||||||||||||||||||||| ||||||||| ||||||    
T  5119120 aatcttgtgtcggccctagttttctagtgagataaatttcaacttctttctaaactttatttctccttcattcatcaaggaggggtggttttatgtcatt 5119219  T
Q  122 tttt 125  Q
    ||||    
T  5119220 tttt 5119223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 40066183 - 40066124
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    |||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  40066183 gtgatttcatcgtctaagtgcggcgttgtgttgttcgtcgtcttatgcagcgtttgattt 40066124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 36 - 134
Target Start/End: Complemental strand, 48257762 - 48257664
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    |||| |||| |||||||| ||||||||||||||||  |||| ||||||||| ||| | |||| |||||| ||||||||| |||||||||||| ||||||    
T  48257762 cctagttttctagtgagaaaaactccaacttctctttaaactttctttctcattcgtacatcgaggaggggtggttttatgtcattttttgacctagaa 48257664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 9165344 - 9165267
Alignment:
Q  48 gtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt 125  Q
    |||||||||||||||||||||||| |||| |||||| ||| ||||||||| |||||  ||||||||||||||| ||||    
T  9165344 gtgagagaaactccaacttctctctaaactttctttttccatcattcatcgaggagaggtggttttaggtcatatttt 9165267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 21686369 - 21686305
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||| |||||    
T  21686369 gtgatttcgtcgtctaagtgcggcgtg-tgttgttcgtcgtcttgtgcggcgtttgatttcgcgtc 21686305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 56156770 - 56156705
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||  ||||||||||| |||||    
T  56156770 gtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgtggcgtttgatttcgcgtc 56156705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 19853640 - 19853576
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgt 283  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||  || |||||||||||||    
T  19853640 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttatgtggcatttgattttgcgt 19853576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 220 - 284
Target Start/End: Complemental strand, 24099194 - 24099130
Alignment:
Q  220 tgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||||||||||||||| || |||||||||||||||||||| ||| ||||||| |||||    
T  24099194 tgatttcgtcgtctaagtgcggcattttgttgttcgtcgtcttgtgcggcgattgatttcgcgtc 24099130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 125
Target Start/End: Original strand, 33920853 - 33920937
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt 125  Q
    ||||||||||||||||||| |||||| || | |||| |||||||| ||||||||||| || | | ||||||||||||||||||||    
T  33920853 ttttttagtgagagaaacttcaacttttccctaaactttctttcttcttcattcatcgagaatgggtggttttaggtcatttttt 33920937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 219 - 266
Target Start/End: Complemental strand, 4142883 - 4142836
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgc 266  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  4142883 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgc 4142836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 219 - 266
Target Start/End: Original strand, 13634096 - 13634143
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgc 266  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  13634096 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgc 13634143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 21686560 - 21686465
Alignment:
Q  29 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt 124  Q
    ||||| ||||| |||| ||||||||||||||  |||||||||| |||| ||||||||||||  |||||| |||||| ||||||| ||||| |||||    
T  21686560 agccgatcctagttttctagtgagagaaactttaacttctctctaaactttctttctcctttgttcatcgaggaggggtggtttgaggtctttttt 21686465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 219 - 266
Target Start/End: Complemental strand, 26633799 - 26633752
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgc 266  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  26633799 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgc 26633752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 43510178 - 43510237
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    ||||||||||||||||||||||||||| |||| || |||||||||||| |||||||||||    
T  43510178 gtgatttcgtcgtctaagtgcggcgttgtgttatttgtcgtcttgtgcggcgtttgattt 43510237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 134
Target Start/End: Original strand, 35348102 - 35348200
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    |||| |||| |||||| ||||||||||||||||||  |||| || ||||||||||  |||||  ||||| ||| |||||||||||||||||| ||||||    
T  35348102 cctagttttctagtgaaagaaactccaacttctctttaaactttttttctccttcgctcatcgtggaggggtgattttaggtcattttttgacctagaa 35348200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 12199821 - 12199756
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||||||| |||| |||||| |||||||| |||| ||||||||| ||||||||||||||    
T  12199821 gtgatttcgtcgtctgagtgtggcgttgtgttgttcatcgttttgtgcagcttttgattttgcgtc 12199756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 53811012 - 53811073
Alignment:
Q  222 atttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgt 283  Q
    |||||||| ||||| ||||||||| |||||||||||||||||||| ||||||||||| ||||    
T  53811012 atttcgtcatctaaatgcggcgttttgttgttcgtcgtcttgtgcggcgtttgatttcgcgt 53811073  T

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Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 127
Target Start/End: Original strand, 21662276 - 21662371
Alignment:
Q  31 ccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    |||||| |||||||||||||| ||||  ||||| || |||| |||  |||||||| ||||||||| | |||||| ||||||||||||||||||||||    
T  21662276 ccggtcataattttttagtgatagaatatccaatttttctctaaaatttctttcttcttcattca-cgaggaggggtggttttaggtcattttttga 21662371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 127
Target Start/End: Original strand, 21671040 - 21671135
Alignment:
Q  31 ccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    |||||| |||||||||||||| ||||  ||||| || |||| |||  |||||||| ||||||||| | |||||| ||||||||||||||||||||||    
T  21671040 ccggtcataattttttagtgatagaatatccaatttttctctaaaatttctttcttcttcattca-cgaggaggggtggttttaggtcattttttga 21671135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 51024781 - 51024713
Alignment:
Q  29 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatc 97  Q
    |||||| |||||||||  ||||||||||||||||||||||||| | || ||||||||||||| ||||||    
T  51024781 agccggccctaattttccagtgagagaaactccaacttctctctatactttctttctccttcgttcatc 51024713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 283
Target Start/End: Original strand, 2520758 - 2520824
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgt--tgttcgtcgtcttgtgcagcgtttgattttgcgt 283  Q
    ||||||||||||||||||||||| ||| |||  ||||||||||||||||| ||||||||||| ||||    
T  2520758 gtgatttcgtcgtctaagtgcggtgttgtgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgt 2520824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 33921032 - 33921091
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    ||||||||||||||||||||||||||| ||||||||| |||||| |||  ||||||||||    
T  33921032 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgccgtcttatgcgacgtttgattt 33921091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 134
Target Start/End: Original strand, 43510010 - 43510093
Alignment:
Q  51 agagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    ||||||||| ||||||||||  |||| ||| ||||||||| |||||| | || | |||||||||||||||||||||| ||||||    
T  43510010 agagaaacttcaacttctctttaaactttcattctccttcgttcatcgaagaagggtggttttaggtcattttttgacctagaa 43510093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 147
Target Start/End: Original strand, 45418319 - 45418433
Alignment:
Q  30 gccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatc 129  Q
    ||||| |||| |||| ||| |||| ||||| ||||||||||| |||  || |||||||| |||||||| |||||   ||||||||||||||||||||| |    
T  45418319 gccggccctagttttctagcgagaaaaacttcaacttctctctaaaaattttttctcctccattcatcgaggag---tggttttaggtcattttttgacc 45418415  T
Q  130 tagaactagccctctaca 147  Q
    |||||  | |||||||||    
T  45418416 tagaatcatccctctaca 45418433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 127
Target Start/End: Complemental strand, 51888529 - 51888438
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    |||| ||||||| ||||||||||| |||||| |||| |    ||||||||| |||| ||||| |||||| ||||||||||||||||||||||    
T  51888529 cctagttttttattgagagaaacttcaacttttctctacgttttctttctctttcactcatcgaggaggggtggttttaggtcattttttga 51888438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 280
Target Start/End: Original strand, 5119320 - 5119381
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttg 280  Q
    |||||||||||||||||||||||  || |||||||||| ||||| ||| |||||||||||||    
T  5119320 gtgatttcgtcgtctaagtgcggtattgtgttgttcgttgtcttttgcggcgtttgattttg 5119381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 284
Target Start/End: Original strand, 10496320 - 10496381
Alignment:
Q  223 tttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||| ||||||||||| | |||||||||||||||||||   ||||||||||||||||    
T  10496320 tttcgtcgtgtaagtgcggcgatgtgttgttcgtcgtcttgtgtgacgtttgattttgcgtc 10496381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 279
Target Start/End: Complemental strand, 26091045 - 26090984
Alignment:
Q  218 agtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgatttt 279  Q
    ||||||||||| || ||| ||||||||||||||||||| ||| |||||| ||||||||||||    
T  26091045 agtgatttcgttgtttaaatgcggcgttctgttgttcgccgttttgtgcggcgtttgatttt 26090984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 28857380 - 28857433
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    |||||||| |||||||||||||||||| |||||||||| ||||||||| |||||    
T  28857380 gtgatttcatcgtctaagtgcggcgttgtgttgttcgttgtcttgtgcggcgtt 28857433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 29120491 - 29120426
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||||||||||||||||| | |||||||| ||||||||| |  |||||||||| |||||    
T  29120491 gtgatttcgtcgtctaagtgcggcgctgtgttgttcatcgtcttgtacgacgtttgatttcgcgtc 29120426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 31891422 - 31891369
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    ||||||||||||||| |||||| |||| ||||||||||||||||||| ||||||    
T  31891422 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgtagcgtt 31891369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 260
Target Start/End: Complemental strand, 36204516 - 36204475
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtc 260  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  36204516 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtc 36204475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 36204689 - 36204604
Alignment:
Q  40 attttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt 125  Q
    ||||||||||||||| ||||||| |||||||| |    ||||||||| |||| |||||||||| |  |||||||||||||||||||    
T  36204689 attttttagtgagaggaactccaccttctctctaggttttctttctctttcaatcatcaaggatggatggttttaggtcatttttt 36204604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 283
Target Start/End: Original strand, 53444099 - 53444163
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgt 283  Q
    ||||||||||||||||||| || |||| |||||||||||||||||||| |  |||||||| ||||    
T  53444099 gtgatttcgtcgtctaagtacgacgttgtgttgttcgtcgtcttgtgcggtatttgatttcgcgt 53444163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 127
Target Start/End: Complemental strand, 29961246 - 29961151
Alignment:
Q  32 cggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    |||| |||| ||| || ||||||||||||||||||||||| |||| |||||| |||||  |||||| | ||||  || |||||||| |||||||||    
T  29961246 cggttctaactttctaatgagagaaactccaacttctctctaaactttctttttcctttgttcatcgaagagggatgattttaggttattttttga 29961151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 44596645 - 44596704
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    |||||||| ||||||||||| | |||| | |||||||||||||||||| |||||||||||    
T  44596645 gtgatttcctcgtctaagtgtgacgttgtattgttcgtcgtcttgtgcggcgtttgattt 44596704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 54021841 - 54021900
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    |||||||||| |||||| |||||| || ||||||| |||||||||||| |||||||||||    
T  54021841 gtgatttcgttgtctaattgcggcattgtgttgttagtcgtcttgtgcggcgtttgattt 54021900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 19896667 - 19896617
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagc 269  Q
    ||||||| ||||||||||||||||||| ||||||||||| |||| ||||||    
T  19896667 gtgattttgtcgtctaagtgcggcgttgtgttgttcgtcatcttttgcagc 19896617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 264
Target Start/End: Complemental strand, 35395798 - 35395756
Alignment:
Q  222 atttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgt 264  Q
    |||||||||||| ||||||||||| ||||||||||||||||||    
T  35395798 atttcgtcgtctgagtgcggcgttgtgttgttcgtcgtcttgt 35395756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 124
Target Start/End: Original strand, 53443928 - 53444010
Alignment:
Q  42 tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt 124  Q
    |||||||||||| ||||| ||||||||||| |||| || |||||| ||| |||||  |||||   ||||||||||||||||||    
T  53443928 tttttagtgagataaacttcaacttctctctaaactttttttctctttcgttcattgaggagcgttggttttaggtcattttt 53444010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 22300827 - 22300880
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    |||||||||||||||  ||||| |||| |||||||||||||||||||| |||||    
T  22300827 gtgatttcgtcgtctgtgtgcgacgttgtgttgttcgtcgtcttgtgcggcgtt 22300880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 125
Target Start/End: Complemental strand, 24099384 - 24099295
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt 125  Q
    |||| |||| |||||| |||||||  || ||||||| |||| |||||||| || | |||||| |||||  ||||||||||||||||||||    
T  24099384 cctagttttctagtgaaagaaactttaaattctctctaaactttctttcttctacgttcatcgaggagaggtggttttaggtcatttttt 24099295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 36194683 - 36194736
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    |||||||||| |||| |||||| |||| |||||||||||||||||||| |||||    
T  36194683 gtgatttcgttgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgtt 36194736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 52944289 - 52944342
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    |||||||||| |||| ||||||||||| ||||||||||||| |||||| |||||    
T  52944289 gtgatttcgtagtctgagtgcggcgttgtgttgttcgtcgttttgtgcggcgtt 52944342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 134
Target Start/End: Complemental strand, 22039105 - 22039013
Alignment:
Q  42 tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    ||||| ||||||||||||  ||||| | |||||   ||||||||| |||| ||||| || ||| |||||||||||||| |||| |||||||||    
T  22039105 ttttttgtgagagaaactttaacttttttcaaagttttctttctctttcactcatcgagcaggggtggttttaggtcaattttggatctagaa 22039013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 27651744 - 27651840
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctag 132  Q
    |||||||||||||||||||||| ||   |||||||| |||  ||||| ||| |||| ||||| |||||| ||| | |||||||| ||||||| ||||    
T  27651744 cctaattttttagtgagagaaattctgtcttctctctaaattttcttcctctttcactcatcgaggaggggtgatgttaggtcaatttttgacctag 27651840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 147
Target Start/End: Original strand, 32766309 - 32766421
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctc-aaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    |||| |||| |||||  |||||||||||||||| || ||||  || |||||||||| |||||  ||  || |||||||||||||||||||||| ||||||    
T  32766309 cctagttttctagtggaagaaactccaacttctttctaaaaaattttttctccttcgttcattgagagggggtggttttaggtcattttttgacctagaa 32766408  T
Q  135 ctagccctctaca 147  Q
      | |||||||||    
T  32766409 tcacccctctaca 32766421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 8670466 - 8670525
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    ||||||| ||||| ||||||||||||| ||||||| ||| |||||||| | |||||||||    
T  8670466 gtgattttgtcgtgtaagtgcggcgttgtgttgttagtcatcttgtgcggtgtttgattt 8670525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 266
Target Start/End: Original strand, 27651918 - 27651965
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgc 266  Q
    ||||||||||||||| |||||  |||| ||||||||||||||||||||    
T  27651918 gtgatttcgtcgtcttagtgcaacgttgtgttgttcgtcgtcttgtgc 27651965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 37030242 - 37030301
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    ||||||||||| ||| ||| ||||||| ||||||||||||||||||   |||||||||||    
T  37030242 gtgatttcgtcatctgagtacggcgttgtgttgttcgtcgtcttgtatggcgtttgattt 37030301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 262
Target Start/End: Complemental strand, 38166356 - 38166313
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtctt 262  Q
    ||||||||||||||| ||||||||||| |||||||||| |||||    
T  38166356 gtgatttcgtcgtctgagtgcggcgttgtgttgttcgttgtctt 38166313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 49072852 - 49072809
Alignment:
Q  223 tttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgc 266  Q
    ||||||||||| |||||| |||| ||||||||||||||||||||    
T  49072852 tttcgtcgtctgagtgcgacgttgtgttgttcgtcgtcttgtgc 49072809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 115
Target Start/End: Complemental strand, 1621805 - 1621719
Alignment:
Q  29 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttag 115  Q
    |||||| |||||||||||||||||||||||||   |||||||| ||   ||||| ||| |||| ||||| |||||| ||| ||||||    
T  1621805 agccggccctaattttttagtgagagaaactctgtcttctctctaagttttcttcctctttcactcatcgaggaggcgtgattttag 1621719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 71
Target Start/End: Original strand, 9643178 - 9643208
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctc 71  Q
    |||||||||||||||||||||||||||||||    
T  9643178 ttttttagtgagagaaactccaacttctctc 9643208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 265
Target Start/End: Complemental strand, 43353657 - 43353611
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtg 265  Q
    |||||||||||||||  ||||||| || |||||||||||||||||||    
T  43353657 gtgatttcgtcgtctcggtgcggctttatgttgttcgtcgtcttgtg 43353611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 127
Target Start/End: Complemental strand, 47320709 - 47320623
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    ||||||||||||||||||| ||||||||||  ||   ||| ||||| |||  ||||| || ||| |||||||||||||||| |||||    
T  47320709 ttttttagtgagagaaacttcaacttctctttaagttttccttctctttcgctcatcgagaaggggtggttttaggtcattctttga 47320623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 272
Target Start/End: Complemental strand, 52934072 - 52934022
Alignment:
Q  222 atttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    ||||| |||||| ||||||||||| ||||||||||| | ||||||||||||    
T  52934072 atttcatcgtctgagtgcggcgttgtgttgttcgtcattttgtgcagcgtt 52934022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 9178334 - 9178399
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    |||||||| || |||||||||| |||| | ||||||||| |||||||  ||||||||||| |||||    
T  9178334 gtgatttcatcatctaagtgcgacgttgtattgttcgtcatcttgtgtggcgtttgatttcgcgtc 9178399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 125
Target Start/End: Original strand, 9713697 - 9713786
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt 125  Q
    |||| |||||||||||||||||||| | |||||||| ||    |||||||| |||| ||||| |||||| ||| ||||| ||| ||||||    
T  9713697 cctagttttttagtgagagaaactctaccttctctctaagttctctttctctttcactcatcgaggaggggtgattttatgtcttttttt 9713786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 134
Target Start/End: Original strand, 18935576 - 18935681
Alignment:
Q  29 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat 128  Q
    |||||| ||||| |||||||||||||||||||   |||||||| ||   ||||| ||| |||  ||||| |||||| ||| ||| |||||| |||||||     
T  18935576 agccggccctaagtttttagtgagagaaactctgtcttctctctaagttttcttcctctttcgctcatcgaggaggggtgatttaaggtcaatttttgac 18935675  T
Q  129 ctagaa 134  Q
    ||||||    
T  18935676 ctagaa 18935681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 31381771 - 31381718
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    |||||||| || |||||||| || | | ||||||||||||||||||||||||||    
T  31381771 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcagcgtt 31381718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 38706809 - 38706756
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    |||||||| || |||||||| || | | ||||||||||||||||||||||||||    
T  38706809 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcagcgtt 38706756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 47320522 - 47320469
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    |||||||||||||||||||  | | || |||||||||||||||||||| |||||    
T  47320522 gtgatttcgtcgtctaagtaagaccttgtgttgttcgtcgtcttgtgcggcgtt 47320469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 277
Target Start/End: Complemental strand, 52061050 - 52060993
Alignment:
Q  220 tgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgatt 277  Q
    ||||||| ||||||||||| ||| || || ||||||||||||||| | ||||||||||    
T  52061050 tgatttcatcgtctaagtgtggcattgtgatgttcgtcgtcttgtacggcgtttgatt 52060993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 266
Target Start/End: Complemental strand, 29961049 - 29961005
Alignment:
Q  222 atttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgc 266  Q
    ||||| ||||||||||| || ||| ||||||||||||||||||||    
T  29961049 atttcatcgtctaagtgtggggttgtgttgttcgtcgtcttgtgc 29961005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 9e-30; HSPs: 77)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 29 - 147
Target Start/End: Original strand, 4778532 - 4778650
Alignment:
Q  29 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat 128  Q
    |||||| |||| |||||||||| ||||||||||||||||| || |||| ||||||||||||| |||||| |||||| ||||||||||||||||||||||     
T  4778532 agccggccctagttttttagtgggagaaactccaacttctttctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgac 4778631  T
Q  129 ctagaactagccctctaca 147  Q
    ||||||  | |||||||||    
T  4778632 ctagaatcacccctctaca 4778650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 36 - 147
Target Start/End: Original strand, 7646258 - 7646369
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 135  Q
    |||| |||| ||||| |||||||||||||||||||| |||| ||||||||||||| |||||| |||||| |||||||||||||||||||||| ||||||     
T  7646258 cctagttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaat 7646357  T
Q  136 tagccctctaca 147  Q
     | |||||||||    
T  7646358 cacccctctaca 7646369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 29 - 147
Target Start/End: Complemental strand, 12677616 - 12677498
Alignment:
Q  29 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat 128  Q
    |||||| |||| |||| |||||||||||||||||||||||||| |||| ||||||||||||  |||||| |||||| || |||| ||||||||||||||     
T  12677616 agccggccctagttttctagtgagagaaactccaacttctctctaaactttctttctcctttgttcatcgaggaggggtagtttaaggtcattttttgac 12677517  T
Q  129 ctagaactagccctctaca 147  Q
    ||||||  | |||||||||    
T  12677516 ctagaatcacccctctaca 12677498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 46 - 147
Target Start/End: Complemental strand, 7678181 - 7678080
Alignment:
Q  46 tagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctcta 145  Q
    |||||||||||||||||||||||||| |||| ||||||||||||| || ||| | |||| |||||||||||||||||||||| ||||||  | |||||||    
T  7678181 tagtgagagaaactccaacttctctctaaactttctttctccttcgttgatcgatgaggggtggttttaggtcattttttgacctagaatcacccctcta 7678082  T
Q  146 ca 147  Q
    ||    
T  7678081 ca 7678080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 134
Target Start/End: Complemental strand, 27097725 - 27097620
Alignment:
Q  29 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat 128  Q
    |||||| |||| |||| |||||  ||||||||||||||||||| |||| ||||||||||||| |||||| |||||| ||| ||||||||||||||||||     
T  27097725 agccggccctagttttctagtggaagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtgattttaggtcattttttgac 27097626  T
Q  129 ctagaa 134  Q
    ||||||    
T  27097625 ctagaa 27097620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 41 - 125
Target Start/End: Original strand, 1421462 - 1421546
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt 125  Q
    |||| |||||||||||||||||||||||| | |||| ||||||||||||| |||||| |||||| ||||||||||||||||||||    
T  1421462 ttttctagtgagagaaactccaacttctcgctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcatttttt 1421546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 36 - 147
Target Start/End: Original strand, 7448034 - 7448145
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 135  Q
    |||| |||| ||||| |||||||||||||||||||| |||| |||||| |||||| |||||| |||||| |||||||||||||||||||||  ||||||     
T  7448034 cctagttttctagtgggagaaactccaacttctctctaaactttctttttccttcgttcatcgaggaggggtggttttaggtcattttttgtcctagaat 7448133  T
Q  136 tagccctctaca 147  Q
     | |||||||||    
T  7448134 cacccctctaca 7448145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 36 - 147
Target Start/End: Original strand, 31788242 - 31788353
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 135  Q
    ||||||||| |||||||||||||||||||||||||| |||| |||||||| |||| |||||| |||||  | |||||||||| ||||||||| ||||||     
T  31788242 cctaattttctagtgagagaaactccaacttctctctaaactttctttcttcttcgttcatcgaggagaggcggttttaggtaattttttgacctagaat 31788341  T
Q  136 tagccctctaca 147  Q
     | |||||||||    
T  31788342 cacccctctaca 31788353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 29 - 134
Target Start/End: Original strand, 35220110 - 35220212
Alignment:
Q  29 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat 128  Q
    |||||| |||| |||| ||||||||||||||||||| |||||| |||| ||||||||||||||||||||   |||| |||||||||||| |||||||||     
T  35220110 agccggccctagttttctagtgagagaaactccaacctctctctaaactttctttctccttcattcatc---gaggggtggttttaggttattttttgac 35220206  T
Q  129 ctagaa 134  Q
    ||||||    
T  35220207 ctagaa 35220212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 134
Target Start/End: Original strand, 4098889 - 4098987
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    |||| |||||||||| |||||||||||||||||||| |||| ||||||||| ||| |||||| |||| | |||| ||||||||||||||||| ||||||    
T  4098889 cctagttttttagtgggagaaactccaacttctctctaaactttctttctctttccttcatcgaggaagggtggctttaggtcattttttgacctagaa 4098987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 134
Target Start/End: Complemental strand, 36943437 - 36943339
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    |||| |||| |||||||||||||||||| || |||| |||| ||||||||||||| || ||| |||||| |||||||||||||||||||||| ||||||    
T  36943437 cctagttttctagtgagagaaactccaatttatctctaaactttctttctccttcgttgatcgaggaggggtggttttaggtcattttttgacctagaa 36943339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 1421647 - 1421712
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||    
T  1421647 gtgatttcgtcgtctaagtgcggtgttatgttgttcgtcgtcttgtgcagcgtttgatttcgcgtc 1421712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 7678002 - 7677937
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||    
T  7678002 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtc 7677937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 29 - 134
Target Start/End: Complemental strand, 43397439 - 43397334
Alignment:
Q  29 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat 128  Q
    |||||| |||| |||| |||||||||||||||||||||||||  |||| |||||| | |||| |||||| || ||| ||||||||||||||||||||||     
T  43397439 agccggccctagttttctagtgagagaaactccaacttctctttaaactttcttttttcttcgttcatcgagaaggggtggttttaggtcattttttgac 43397340  T
Q  129 ctagaa 134  Q
    ||||||    
T  43397339 ctagaa 43397334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 283
Target Start/End: Original strand, 7646444 - 7646508
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgt 283  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||    
T  7646444 gtgatttcgtcgtctaagtgcggcgttatgttgttcgtcgtcttgtgcggcgtttgatttcgcgt 7646508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 18763265 - 18763365
Alignment:
Q  47 agtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctac 146  Q
    ||||||||||||||||||||||||| |||| ||||||| ||||||| |||| |||||  ||||||||| |||||||||||| ||||||  | ||||||||    
T  18763265 agtgagagaaactccaacttctctctaaactttctttcaccttcatccatcgaggagaggtggttttatgtcattttttgacctagaatcacccctctac 18763364  T
Q  147 a 147  Q
    |    
T  18763365 a 18763365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 36943250 - 36943186
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgt 283  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||    
T  36943250 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgt 36943186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 4099077 - 4099138
Alignment:
Q  222 atttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgt 283  Q
    |||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||    
T  4099077 atttcgtcgtctaagtgcggcgttgtgttgttcgttgtcttgtgcggcgtttgattttgcgt 4099138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 44 - 133
Target Start/End: Complemental strand, 5428173 - 5428084
Alignment:
Q  44 tttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctaga 133  Q
    ||||| |||||||||||||||||||||| |||  ||||||||||||| |||||| |||||| |||||||||||| | ||||||| |||||    
T  5428173 tttagagagagaaactccaacttctctctaaattttctttctccttcgttcatcgaggaggggtggttttaggttaatttttgacctaga 5428084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 283
Target Start/End: Original strand, 7448218 - 7448282
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgt 283  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||| ||||    
T  7448218 gtgatttcgttgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgt 7448282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 40 - 124
Target Start/End: Complemental strand, 9169566 - 9169482
Alignment:
Q  40 attttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt 124  Q
    ||||| ||||| |||||||||||||||||||| |||| ||||||||| ||| || ||| |||||| |||||||||||||||||||    
T  9169566 attttctagtgggagaaactccaacttctctctaaactttctttctcattcgtttatcgaggaggggtggttttaggtcattttt 9169482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 283
Target Start/End: Original strand, 35220296 - 35220360
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgt 283  Q
    |||||||||||||||||||||||| || |||||||| ||||||||||| ||||||||||||||||    
T  35220296 gtgatttcgtcgtctaagtgcggcattatgttgttcatcgtcttgtgcggcgtttgattttgcgt 35220360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 283
Target Start/End: Original strand, 38445137 - 38445201
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgt 283  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||| ||||    
T  38445137 gtgatttcgtcgtctaagtgcagcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgt 38445201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 220 - 283
Target Start/End: Original strand, 4778725 - 4778788
Alignment:
Q  220 tgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgt 283  Q
    |||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||| ||||    
T  4778725 tgatttcgtcgtttaagtgcggcgttgtgttattcgtcgtcttgtgcagcgtttgatttcgcgt 4778788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 147
Target Start/End: Complemental strand, 11985543 - 11985432
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 135  Q
    |||| |||| || ||||||||||||||||||||||| |||| ||||||||| ||||||| || |||||  ||||||||| |||||||||| | ||||||     
T  11985543 cctagttttctaatgagagaaactccaacttctctctaaactttctttctctttcattcttcgaggagtggtggttttaagtcattttttaacctagaat 11985444  T
Q  136 tagccctctaca 147  Q
     | |||||||||    
T  11985443 cacccctctaca 11985432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 220 - 278
Target Start/End: Complemental strand, 27097534 - 27097476
Alignment:
Q  220 tgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||    
T  27097534 tgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcatttgattt 27097476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 41 - 123
Target Start/End: Complemental strand, 31129056 - 31128974
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttt 123  Q
    ||||||||||||| ||||| ||||||||||| |||| ||||||||||||| || ||| |||||| ||| ||||||||||||||    
T  31129056 ttttttagtgagaaaaacttcaacttctctctaaactttctttctccttcgttgatcgaggaggggtgattttaggtcatttt 31128974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 5427997 - 5427932
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||  ||||||||||| |||||    
T  5427997 gtgatttcgtcgtccaagtgcggcgttttgttgttcgtcgtcttgtgtggcgtttgatttcgcgtc 5427932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 11985359 - 11985294
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    |||||||||||||||||||||||| || ||||||| || ||||||||| |||||||||||||||||    
T  11985359 gtgatttcgtcgtctaagtgcggctttgtgttgtttgttgtcttgtgcggcgtttgattttgcgtc 11985294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 18763439 - 18763504
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    |||||||| |||||||||||||| ||| |||||||||||||||||||| ||||||||||| |||||    
T  18763439 gtgatttcatcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtc 18763504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 37876735 - 37876670
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||| || |||||||| |||||    
T  37876735 gtgatttggtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcatttgatttcgcgtc 37876670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 43397248 - 43397183
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||  ||||||||||| |||||    
T  43397248 gtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgtggcgtttgatttcgcgtc 43397183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 220 - 284
Target Start/End: Complemental strand, 31210735 - 31210671
Alignment:
Q  220 tgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    |||||||||||||||||||||||||| ||||||| || ||||||||| ||||||||||| |||||    
T  31210735 tgatttcgtcgtctaagtgcggcgttgtgttgtttgttgtcttgtgcggcgtttgatttcgcgtc 31210671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 37876893 - 37876813
Alignment:
Q  54 gaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    |||| ||||||||||||| |||| |||||||| |||| |||||| |||||| |||||||||||||| ||||||| ||||||    
T  37876893 gaaattccaacttctctctaaactttctttcttcttcgttcatcgaggaggggtggttttaggtcaatttttgacctagaa 37876813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 9169387 - 9169328
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||  ||||||||||    
T  9169387 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgttgtcttgtgcgtcgtttgattt 9169328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 219 - 281
Target Start/End: Complemental strand, 4041723 - 4041661
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgc 281  Q
    ||||||||||| |||||||||| |||| |||||||||||||||||| | ||||||||||||||    
T  4041723 gtgatttcgtcttctaagtgcgtcgttgtgttgttcgtcgtcttgtacggcgtttgattttgc 4041661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 29279883 - 29279794
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttg 126  Q
    ||||||||| | |||||||||||||||||||||||| || | |||||||| ||||||||||| |||| | | | |||||||||||||||||    
T  29279883 cctaattttcttgtgagagaaactccaacttctctctaacctttctttct-cttcattcatcgaggatgagcgattttaggtcattttttg 29279794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 280
Target Start/End: Complemental strand, 4904274 - 4904213
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttg 280  Q
    |||||||||||||| ||||| |||||| ||||||||||||||||||||  ||||||||||||    
T  4904274 gtgatttcgtcgtcaaagtgtggcgttgtgttgttcgtcgtcttgtgcgacgtttgattttg 4904213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 10237352 - 10237299
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    ||||||||||||||| |||||| |||| ||||||||||||||||||||||||||    
T  10237352 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcagcgtt 10237299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 219 - 283
Target Start/End: Original strand, 1415528 - 1415592
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgt 283  Q
    ||||||||||||||||||| || |||| |||||||| ||||||||||| ||||||||||| ||||    
T  1415528 gtgatttcgtcgtctaagtacgacgttgtgttgttcttcgtcttgtgcggcgtttgatttcgcgt 1415592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 222 - 278
Target Start/End: Original strand, 31788431 - 31788487
Alignment:
Q  222 atttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    ||||||||||||||||||| |||| |||||||||| ||||||||| |||||||||||    
T  31788431 atttcgtcgtctaagtgcgacgttttgttgttcgttgtcttgtgcggcgtttgattt 31788487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 219 - 283
Target Start/End: Original strand, 33923676 - 33923740
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgt 283  Q
    |||||||||| |||||||| ||  |||||||||||||||||||||||| ||||||||||| ||||    
T  33923676 gtgatttcgttgtctaagtacgatgttctgttgttcgtcgtcttgtgcggcgtttgatttcgcgt 33923740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 19062481 - 19062422
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    ||||| ||||||||||||||| ||||| |||||||||||||||||||| || ||||||||    
T  19062481 gtgatatcgtcgtctaagtgcagcgttgtgttgttcgtcgtcttgtgcggcatttgattt 19062422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 42698987 - 42698928
Alignment:
Q  37 ctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcat 96  Q
    ||||||||||||||||||||||| |||||||| || |||| |||||||||||| ||||||    
T  42698987 ctaattttttagtgagagaaacttcaacttctttctaaactttctttctcctttattcat 42698928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 42 - 128
Target Start/End: Original strand, 41694407 - 41694493
Alignment:
Q  42 tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat 128  Q
    |||||||| ||||||||| || |||||||| || | |||| ||||||||| ||||| || || ||| ||||||||||||||||||||    
T  41694407 tttttagtaagagaaacttcaccttctctctaagctttctctctccttcactcatcgagaagatgtagttttaggtcattttttgat 41694493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 12648052 - 12647999
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    |||||||| |||||||||||||| ||| |||||||||||||||||||| |||||    
T  12648052 gtgatttcatcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgtt 12647999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 19029043 - 19028978
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||||||||||| ||||||| |||| ||||||||| ||||| || |||||||| |||||    
T  19029043 gtgatttcgtcgtctaagttcggcgttgtgttattcgtcgtcatgtgcggcatttgatttcgcgtc 19028978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 134
Target Start/End: Original strand, 24461238 - 24461323
Alignment:
Q  49 tgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    |||| |||||||||||||||||| ||   ||  ||||| |||| |||| ||||||| |||||||||||||||||||||| ||||||    
T  24461238 tgagtgaaactccaacttctctctaagtttttattctctttcactcattaaggaggggtggttttaggtcattttttgacctagaa 24461323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 42698829 - 42698765
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    |||||||| ||||||| ||||| |||| |||||||||||||||||||  |||||||||||||||||    
T  42698829 gtgatttcatcgtcta-gtgcgacgttgtgttgttcgtcgtcttgtgtggcgtttgattttgcgtc 42698765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 222 - 286
Target Start/End: Complemental strand, 30400161 - 30400097
Alignment:
Q  222 atttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtcgt 286  Q
    ||||||||||||||||||| | || |||||||| ||||||||||| || ||||||||||| ||||    
T  30400161 atttcgtcgtctaagtgcgacattgtgttgttcttcgtcttgtgcggcatttgattttgcatcgt 30400097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 124
Target Start/End: Original strand, 8809073 - 8809156
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt 124  Q
    |||||||||  ||||||||| |||||||||| |||| ||||||||||||||| | || ||||   |||||||||| ||||||||    
T  8809073 ttttttagtaggagaaactctaacttctctctaaactttctttctccttcatacgtcgaggacaggtggttttagatcattttt 8809156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 262
Target Start/End: Complemental strand, 29173848 - 29173805
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtctt 262  Q
    ||||||||||||||||||||||||||| |||||||| |||||||    
T  29173848 gtgatttcgtcgtctaagtgcggcgttgtgttgttcatcgtctt 29173805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 266
Target Start/End: Complemental strand, 29574760 - 29574713
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgc 266  Q
    ||||||||||||||  ||||||||||| ||||||||||||||||||||    
T  29574760 gtgatttcgtcgtccgagtgcggcgttgtgttgttcgtcgtcttgtgc 29574713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 266
Target Start/End: Complemental strand, 32448750 - 32448703
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgc 266  Q
    |||||||||||||||||||||| | || ||||||||||||||||||||    
T  32448750 gtgatttcgtcgtctaagtgcgaccttgtgttgttcgtcgtcttgtgc 32448703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 115
Target Start/End: Original strand, 36691657 - 36691732
Alignment:
Q  41 ttttttagtgagagaaactccaactt-ctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttag 115  Q
    |||| ||||||||||||||||||||| || || |||||||||||||||||| || ||  |||||| ||||||||||    
T  36691657 ttttctagtgagagaaactccaactttctttctaaaccttctttctccttccttaattgaggaggggtggttttag 36691732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 36691845 - 36691904
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    ||||||||||||||||||||||||||| |||||||| |||| | ||||  ||||||||||    
T  36691845 gtgatttcgtcgtctaagtgcggcgttttgttgttcatcgtttagtgcgacgtttgattt 36691904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 39310981 - 39310922
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    |||||||| || |||||||| || ||| |||||||| |||||||||||||||||||||||    
T  39310981 gtgatttcatcatctaagtgtggtgttgtgttgttcttcgtcttgtgcagcgtttgattt 39310922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 127
Target Start/End: Complemental strand, 4904444 - 4904358
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    ||||||||| ||||||||| ||||||||||| |||| ||||||||| ||| || ||  | |||  ||||||||| ||||||||||||    
T  4904444 ttttttagtaagagaaacttcaacttctctctaaactttctttctcattcgtttattgaagagtggtggttttatgtcattttttga 4904358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 23933911 - 23933869
Alignment:
Q  29 agccggtcctaattttttagtgagagaaactccaacttctctc 71  Q
    |||||||||||||||||||||||||| ||||||| ||||||||    
T  23933911 agccggtcctaattttttagtgagagtaactccaccttctctc 23933869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 127
Target Start/End: Complemental strand, 32448929 - 32448843
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    |||||||||||||||||||| |||||||||  |||  ||  || || |||| ||||| |||||| |||||||||||||||| |||||    
T  32448929 ttttttagtgagagaaactctaacttctctttaaatttttcttttctttcactcatcgaggaggggtggttttaggtcattatttga 32448843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 124
Target Start/End: Complemental strand, 36175712 - 36175666
Alignment:
Q  78 ttctttctccttcattcatcaaggaggtgtggttttaggtcattttt 124  Q
    ||||||||||||||||||||||| ||  |||||||||||||||||||    
T  36175712 ttctttctccttcattcatcaagaagaggtggttttaggtcattttt 36175666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 147
Target Start/End: Original strand, 38444982 - 38445063
Alignment:
Q  65 ttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctaca 147  Q
    ||||||| |||| ||||||||||||| |||||| | |||  |||||||||||||| ||||||||||||||  | |||||||||    
T  38444982 ttctctctaaactttctttctccttcgttcatcgatgagaggtggttttaggtca-tttttgatctagaatcacccctctaca 38445063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 6359005 - 6358952
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    ||||||| ||||||| |||| | |||| ||||||||||||||||||||||||||    
T  6359005 gtgattttgtcgtctgagtgtgtcgttgtgttgttcgtcgtcttgtgcagcgtt 6358952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 10929632 - 10929677
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgt 264  Q
    ||||||||||||||| ||||||| ||| ||||||||||||||||||    
T  10929632 gtgatttcgtcgtctgagtgcggtgttgtgttgttcgtcgtcttgt 10929677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 125
Target Start/End: Complemental strand, 28872069 - 28871987
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt 125  Q
    ||||||||||||||||||||||  ||||||| ||   || |||||| |||||||||| |||| | ||||||||||||| ||||||    
T  28872069 ttttttagtgagagaaactccacattctctctaat--ttttttctcattcattcatcgaggatgagtggttttaggtcttttttt 28871987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 266
Target Start/End: Complemental strand, 34128813 - 34128769
Alignment:
Q  222 atttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgc 266  Q
    |||||||||||| ||||||| ||| ||||||||||||||||||||    
T  34128813 atttcgtcgtctgagtgcggtgttatgttgttcgtcgtcttgtgc 34128769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 36323840 - 36323899
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    ||||||||||||| | |||||||| || ||||||| || ||||||||| |||||||||||    
T  36323840 gtgatttcgtcgtttgagtgcggctttgtgttgtttgttgtcttgtgcggcgtttgattt 36323899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 124
Target Start/End: Original strand, 37416493 - 37416576
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt 124  Q
    ||||||| ||||||||||| ||||||||||| |||  || ||| || ||||||| || | |||| ||| |||||||||||||||    
T  37416493 ttttttaatgagagaaacttcaacttctctctaaattttttttatctttcattcgtcgatgaggggtgattttaggtcattttt 37416576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 284
Target Start/End: Complemental strand, 18107849 - 18107811
Alignment:
Q  246 ctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||||||||||||| ||||||||||| |||||    
T  18107849 ctgttgttcgtcgtcttgtgcggcgtttgatttcgcgtc 18107811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 277
Target Start/End: Complemental strand, 31128909 - 31128851
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgatt 277  Q
    ||||||||||| | ||| ||||||||| ||||||| |||||||||||  ||||||||||    
T  31128909 gtgatttcgtcatttaattgcggcgttgtgttgttagtcgtcttgtgtggcgtttgatt 31128851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 3308909 - 3308962
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    ||||||||||||||| |||||| |||| |||| || |||||||||||| |||||    
T  3308909 gtgatttcgtcgtcttagtgcgacgttgtgttatttgtcgtcttgtgcggcgtt 3308962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 134
Target Start/End: Complemental strand, 18108044 - 18107951
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    ||||| ||| ||||||| ||||  ||||||| ||   ||||||||| |||||||||  ||||   |||||||||||||||||||||| ||||||    
T  18108044 tttttaagtaagagaaagtccactttctctctaagttttctttctctttcattcattgaggaatggtggttttaggtcattttttgacctagaa 18107951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 125
Target Start/End: Complemental strand, 25509379 - 25509291
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt 125  Q
    ||||||||| |||||||| |||||| ||||| |||| || | |||||||| |||| |||||| ||||   ||||||||||||| ||||||    
T  25509379 cctaattttctagtgagaaaaactcaaacttttctctaa-ctttctttcttcttcgttcatcgaggaatggtggttttaggtcttttttt 25509291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 4042278 - 4042230
Alignment:
Q  48 gtgagagaaactccaacttctctcaaaaccttctttctccttcattcat 96  Q
    |||||||||||||||||||||||| |||| || |||||| ||| |||||    
T  4042278 gtgagagaaactccaacttctctctaaactttttttctcattccttcat 4042230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 271
Target Start/End: Complemental strand, 17249274 - 17249226
Alignment:
Q  223 tttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgt 271  Q
    |||||| ||||||||||| | || |||||||||||||||||||| ||||    
T  17249274 tttcgttgtctaagtgcgaccttgtgttgttcgtcgtcttgtgcggcgt 17249226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 29279699 - 29279655
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttg 263  Q
    ||||||||||||||||| ||||||||| ||||| | |||||||||    
T  29279699 gtgatttcgtcgtctaattgcggcgttgtgttggtagtcgtcttg 29279655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 34335831 - 34335780
Alignment:
Q  220 tgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    |||||||||||| ||||| ||||||| ||||||| ||||||||||||| ||||    
T  34335831 tgatttcgtcgt-taagtacggcgttgtgttgttggtcgtcttgtgcaacgtt 34335780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 29 - 147
Target Start/End: Original strand, 15261 - 15379
Alignment:
Q  29 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat 128  Q
    |||||| |||| |||| |||||||||||||| ||||||||||| |||| ||||||||||||| ||| || |||||| ||||||||||||||||||||||     
T  15261 agccggccctagttttctagtgagagaaacttcaacttctctctaaactttctttctccttcgttcttcgaggaggggtggttttaggtcattttttgac 15360  T
Q  129 ctagaactagccctctaca 147  Q
    ||||||  | |||||||||    
T  15361 ctagaatcacccctctaca 15379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 219 - 273
Target Start/End: Original strand, 15452 - 15506
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgttt 273  Q
    ||||||||||| ||||||||||| ||| |||||||||||||||||||| ||||||    
T  15452 gtgatttcgtcatctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgttt 15506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 2e-27; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 41 - 147
Target Start/End: Complemental strand, 19405062 - 19404956
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 140  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||  || ||| |||||||||||||||||||||| ||||||  | ||    
T  19405062 ttttttagtgagagaaactccaacttctctctaaatcttctttctccttaattcattgagaaggggtggttttaggtcattttttgacctagaatcaccc 19404963  T
Q  141 ctctaca 147  Q
    |||||||    
T  19404962 ctctaca 19404956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 41 - 134
Target Start/End: Original strand, 42978391 - 42978484
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    |||| ||||||||||||||| |||||||||| |||| ||||||||||||| |||||| |||||| |||||||||||||||||||||| ||||||    
T  42978391 ttttctagtgagagaaactctaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaa 42978484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 36 - 134
Target Start/End: Complemental strand, 9450450 - 9450352
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    ||||||||| ||||||||||||||||||||||| |  |||| ||||||||||||| |||||| ||||||  ||||||||||||||||||||| ||||||    
T  9450450 cctaattttctagtgagagaaactccaacttctttttaaactttctttctccttcgttcatcgaggagggatggttttaggtcattttttgacctagaa 9450352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 42 - 127
Target Start/End: Complemental strand, 12141615 - 12141530
Alignment:
Q  42 tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    ||||||| |||||||||||||||||||||| |||| ||||||||||||| |||||| | |||| ||||||||||||||||||||||    
T  12141615 tttttagagagagaaactccaacttctctctaaactttctttctccttcgttcatcgaagaggggtggttttaggtcattttttga 12141530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 36 - 147
Target Start/End: Complemental strand, 8013778 - 8013667
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 135  Q
    |||| ||||||||||||||||||| ||||||||||| |||| |||||||| |||  |||||| |||||| |||||||||| ||||||||||| ||||||     
T  8013778 cctagttttttagtgagagaaacttcaacttctctctaaactttctttcttctttgttcatcgaggaggggtggttttagatcattttttgacctagaat 8013679  T
Q  136 tagccctctaca 147  Q
     | |||||||||    
T  8013678 cacccctctaca 8013667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 218 - 281
Target Start/End: Complemental strand, 19404886 - 19404823
Alignment:
Q  218 agtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgc 281  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  19404886 agtgatttcgtcgtctaagtgcggcgttctattgttcgtcgtcttgtgcatcgtttgattttgc 19404823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 49 - 147
Target Start/End: Complemental strand, 37837758 - 37837660
Alignment:
Q  49 tgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctaca 147  Q
    ||||||||||||||||||||||| |||| || |||||||||| |||||  |||||| |||||||||||||||||||||| ||||||  | |||||||||    
T  37837758 tgagagaaactccaacttctctctaaactttatttctccttcgttcattgaggaggggtggttttaggtcattttttgacctagaatcacccctctaca 37837660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 8001674 - 8001609
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||    
T  8001674 gtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtttgatttcgcgtc 8001609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 34 - 147
Target Start/End: Complemental strand, 30757134 - 30757021
Alignment:
Q  34 gtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctaga 133  Q
    |||||| |||||||||| |||||||| ||||||||||| |||  ||||||||| ||| |||||| |||||| |||||||||||| ||||||||| |||||    
T  30757134 gtcctagttttttagtgggagaaacttcaacttctctctaaattttctttctctttcgttcatcgaggaggggtggttttaggtaattttttgacctaga 30757035  T
Q  134 actagccctctaca 147  Q
    |  | |||||||||    
T  30757034 atcacccctctaca 30757021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 47590274 - 47590339
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  47590274 gtgatttcgttgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgattttgcgtc 47590339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 42 - 127
Target Start/End: Original strand, 48061206 - 48061291
Alignment:
Q  42 tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    ||||||| |||||||||||||||||||||| |||| |||||| |||||| |||||| |||||  ||||||||||||||||||||||    
T  48061206 tttttagagagagaaactccaacttctctctaaactttctttatccttcgttcatcgaggagaggtggttttaggtcattttttga 48061291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 48316940 - 48316875
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||    
T  48316940 gtgatttcgtcgtctaagtacggcgttgtgttgttcgtcgtcttgtgcagcgtttgatttcgcgtc 48316875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 30756947 - 30756883
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgt 283  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||    
T  30756947 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgt 30756883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 19296833 - 19296892
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  19296833 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgattt 19296892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 34899735 - 34899676
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  34899735 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgattt 34899676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 42978573 - 42978632
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  42978573 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgattt 42978632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 37837586 - 37837521
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    |||||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  37837586 gtgatttcatcatctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgattttgcgtc 37837521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 39171718 - 39171653
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||    
T  39171718 gtgatttcgtcatctaagtgctgcgttttgttgttcgtcgtcttgtgcagcgtttgattttacgtc 39171653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 41 - 147
Target Start/End: Complemental strand, 34899912 - 34899809
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc 140  Q
    |||||||||| |||||||||||||||||||| |||| ||||||||||||| |||| |   || | |||||||||||||||||||||| ||||||  | ||    
T  34899912 ttttttagtgggagaaactccaacttctctctaaactttctttctccttcgttcacc---gatgagtggttttaggtcattttttgacctagaatcaccc 34899816  T
Q  141 ctctaca 147  Q
    |||||||    
T  34899815 ctctaca 34899809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 39328918 - 39328854
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgt 283  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||| ||||    
T  39328918 gtgatttcgtcgtctaagtacggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgt 39328854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 48317114 - 48317014
Alignment:
Q  47 agtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctac 146  Q
    ||||| |||||||| |||||||||| |||  | ||||||||||| ||||||||||||| ||||||||||||||||||| || ||||||  | ||||||||    
T  48317114 agtgaaagaaactctaacttctctctaaatttgctttctccttcgttcatcaaggaggggtggttttaggtcatttttggacctagaatcacccctctac 48317015  T
Q  147 a 147  Q
    |    
T  48317014 a 48317014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 127
Target Start/End: Original strand, 4529857 - 4529948
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    |||| |||| |||||||||||||| || |||||||| ||  ||||||||||||||||||||||| |||  ||| ||||||||||||||||||    
T  4529857 cctagttttctagtgagagaaacttcaccttctctctaagtcttctttctccttcattcatcaaagagaggtgattttaggtcattttttga 4529948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 9450265 - 9450206
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||    
T  9450265 gtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgcggcgtttgattt 9450206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 147
Target Start/End: Original strand, 19296656 - 19296767
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 135  Q
    |||| |||||||||| |||||||||||||||| ||| ||   || ||| |||||| |||||| |||||| |||||||||||||||||||||| ||||||     
T  19296656 cctagttttttagtgggagaaactccaacttccctctaatttttttttgtccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaat 19296755  T
Q  136 tagccctctaca 147  Q
     | |||||||||    
T  19296756 cacccctctaca 19296767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 147
Target Start/End: Complemental strand, 39171905 - 39171794
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac 135  Q
    |||| |||| |||||||| |||||||||| | |||| |||| |||||||| |||| |||||| |||||| |||||| ||||||||||||||| ||||||     
T  39171905 cctagttttctagtgagataaactccaacgtatctctaaactttctttcttcttcgttcatcgaggaggggtggttgtaggtcattttttgacctagaat 39171806  T
Q  136 tagccctctaca 147  Q
     | |||||||||    
T  39171805 cacccctctaca 39171794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 124
Target Start/End: Original strand, 47590085 - 47590180
Alignment:
Q  29 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt 124  Q
    ||||||||| | ||||||||||||||||| ||||||||||||| |||  ||||||||| ||| |||||  |||||| ||| |||||||||||||||    
T  47590085 agccggtccaagttttttagtgagagaaattccaacttctctctaaattttctttctcattcgttcatagaggaggggtgattttaggtcattttt 47590180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 29 - 147
Target Start/End: Complemental strand, 13797251 - 13797133
Alignment:
Q  29 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat 128  Q
    ||||||||||| |||| |||||||||||||| ||||||||||  |||  ||||||||| ||| |||||| |||| |  ||||||||||||||||||| |     
T  13797251 agccggtcctagttttctagtgagagaaacttcaacttctctttaaattttctttctcgttcgttcatcgaggatggatggttttaggtcattttttaac 13797152  T
Q  129 ctagaactagccctctaca 147  Q
    ||||||  | |||||||||    
T  13797151 ctagaatcacccctctaca 13797133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 12141436 - 12141371
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||| || |||||||| |||||    
T  12141436 gtgatttcgtcgtctaagtgcggcgttttgttgtttgtcgtcttgtgcggcatttgatttcgcgtc 12141371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 48061385 - 48061450
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    |||||||||||||||||||||||| || |||||||||||||||| |||  ||||||||||||||||    
T  48061385 gtgatttcgtcgtctaagtgcggcattttgttgttcgtcgtcttatgcgacgtttgattttgcgtc 48061450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 39329113 - 39329017
Alignment:
Q  29 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt 125  Q
    |||||| ||||||||| ||||||||||||||| ||||| | || |||| ||||||||||||  |||||| |||||| |||| |||||||| ||||||    
T  39329113 agccggccctaattttctagtgagagaaactcaaacttttttctaaactttctttctcctttgttcatcgaggaggagtgggtttaggtcttttttt 39329017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 219 - 281
Target Start/End: Complemental strand, 26623918 - 26623856
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgc 281  Q
    |||||||| |||||| ||||||||||| |||||||||||||||||| | ||||||||||||||    
T  26623918 gtgatttcatcgtctgagtgcggcgttgtgttgttcgtcgtcttgtacggcgtttgattttgc 26623856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 38798747 - 38798808
Alignment:
Q  222 atttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgt 283  Q
    |||| ||||||||||| || |||| |||||||||||||||||||| ||||||||||||||||    
T  38798747 attttgtcgtctaagtacgacgttgtgttgttcgtcgtcttgtgcggcgtttgattttgcgt 38798808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 45349927 - 45349862
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    |||||||||||||||||||| |||||| ||||||||||||| |||||  ||||||||||| |||||    
T  45349927 gtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgttttgtgtggcgtttgatttcgcgtc 45349862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 24770209 - 24770268
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    ||||||||||||||||||||||| ||| |||||||||||||||| |||  ||||||||||    
T  24770209 gtgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttatgcgacgtttgattt 24770268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 127
Target Start/End: Complemental strand, 25287498 - 25287403
Alignment:
Q  32 cggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    ||||||||||||||||||||||||||||  |||||||||  |||  ||||||||||||||||| || | |||  ||||||||| || ||| |||||    
T  25287498 cggtcctaattttttagtgagagaaactataacttctctataaattttctttctccttcattcgtcgaagagaggtggttttaagttattatttga 25287403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 266
Target Start/End: Original strand, 40993145 - 40993192
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgc 266  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  40993145 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcatcttgtgc 40993192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 134
Target Start/End: Complemental strand, 5078702 - 5078608
Alignment:
Q  40 attttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    |||||||||||||||||||| ||||||||||| ||    ||||| || |||| |||| ||||| | ||| |||||||||||||||||| ||||||    
T  5078702 attttttagtgagagaaacttcaacttctctctaagttctctttatctttcactcattaaggaagggtgattttaggtcattttttgacctagaa 5078608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 24350973 - 24350919
Alignment:
Q  218 agtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    |||||||||||||||| |||||| |||| |||||||||||||||||||| |||||    
T  24350973 agtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgtt 24350919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 9977334 - 9977269
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||||||||||||| ||||| | ||||||||||||||||   ||||||||||| |||||    
T  9977334 gtgatttcgtcgtctaagtgcagcgttgtattgttcgtcgtcttgtttggcgtttgatttcgcgtc 9977269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 28476183 - 28476236
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    ||||||||||||||| |||||| |||| |||||||||||||||||||| |||||    
T  28476183 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgtt 28476236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 31235891 - 31235838
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    ||||||||||| |||||||| |||| | ||||||||||||||||||||||||||    
T  31235891 gtgatttcgtcatctaagtgtggcggtttgttgttcgtcgtcttgtgcagcgtt 31235838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 3267327 - 3267275
Alignment:
Q  232 ctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    |||||||||||||| ||||||||||||||||||||  |||||||||| |||||    
T  3267327 ctaagtgcggcgttttgttgttcgtcgtcttgtgcgacgtttgatttcgcgtc 3267275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 266
Target Start/End: Complemental strand, 1749282 - 1749235
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgc 266  Q
    ||||||||||||||| |||||| |||| ||||||||||||||||||||    
T  1749282 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgc 1749235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 127
Target Start/End: Original strand, 40992960 - 40993050
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    |||| |||| ||||| |||||||||||||||||||| |||| ||  |||| |||| |||||| |||| | || |||||||||||||||||||    
T  40992960 cctagttttctagtgggagaaactccaacttctctctaaactttagttcttcttcgttcatcgaggatg-gtagttttaggtcattttttga 40993050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 273
Target Start/End: Complemental strand, 24069525 - 24069471
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgttt 273  Q
    |||||||| |||||| ||||||||||| |||||||||| ||||||||| ||||||    
T  24069525 gtgatttcatcgtctgagtgcggcgttgtgttgttcgttgtcttgtgcggcgttt 24069471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 278
Target Start/End: Original strand, 25255199 - 25255249
Alignment:
Q  228 tcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    |||||| ||||||||||| |||| |||| ||||||||||||||||||||||    
T  25255199 tcgtctgagtgcggcgttgtgttattcgccgtcttgtgcagcgtttgattt 25255249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 22742900 - 22742953
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    ||||||||||||||| ||| || |||| |||||||||||||||||||| |||||    
T  22742900 gtgatttcgtcgtcttagttcgacgttgtgttgttcgtcgtcttgtgcggcgtt 22742953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 35132903 - 35132948
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgt 264  Q
    ||||||||||||||| |||||| |||| ||||||||||||||||||    
T  35132903 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgt 35132948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 39228978 - 39229043
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    |||||||||| |||| ||||||  ||| |||||||||||||||||||| ||||| ||||| |||||    
T  39228978 gtgatttcgttgtctgagtgcgttgttgtgttgttcgtcgtcttgtgcggcgttagatttcgcgtc 39229043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 13797059 - 13797023
Alignment:
Q  220 tgatttcgtcgtctaagtgcggcgttctgttgttcgt 256  Q
    |||||||||||||||||||||||||| ||||||||||    
T  13797059 tgatttcgtcgtctaagtgcggcgttgtgttgttcgt 13797023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 48930730 - 48930782
Alignment:
Q  220 tgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    |||||||||||||| |||||| |||| |||| ||||||||||||||| |||||    
T  48930730 tgatttcgtcgtcttagtgcgacgttgtgttattcgtcgtcttgtgcggcgtt 48930782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 124
Target Start/End: Complemental strand, 3224725 - 3224642
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt 124  Q
    ||||||||||||||||| |||||||| | || |||  ||||||||| |||| || || | || | |||||||||||||||||||    
T  3224725 ttttttagtgagagaaattccaacttttttctaaattttctttctctttcactcttcgaagatgggtggttttaggtcattttt 3224642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 266
Target Start/End: Complemental strand, 25287314 - 25287267
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgc 266  Q
    ||||||| || ||||||||| |||||| ||||||||||||||||||||    
T  25287314 gtgattttgttgtctaagtgtggcgttgtgttgttcgtcgtcttgtgc 25287267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 45350500 - 45350445
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcat 96  Q
    |||| |||||||||||||| ||||||||||| |||| || |||||||||| |||||    
T  45350500 ttttctagtgagagaaacttcaacttctctctaaactttttttctccttcgttcat 45350445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 265
Target Start/End: Original strand, 3394434 - 3394480
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtg 265  Q
    |||||||| |||||| ||||||| ||| |||||||||||||||||||    
T  3394434 gtgatttcatcgtctgagtgcggtgttgtgttgttcgtcgtcttgtg 3394480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 9915941 - 9916011
Alignment:
Q  55 aaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt 125  Q
    ||||||||||||||||| |||| ||||||||||||| || ||| ||||||  |  ||||||||| ||||||    
T  9915941 aaactccaacttctctccaaactttctttctccttcgtttatcgaggagggttaattttaggtcttttttt 9916011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 9923853 - 9923923
Alignment:
Q  55 aaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt 125  Q
    ||||||||||||||||| |||| ||||||||||||| || ||| ||||||  |  ||||||||| ||||||    
T  9923853 aaactccaacttctctccaaactttctttctccttcgtttatcgaggagggttaattttaggtcttttttt 9923923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 24350695 - 24350737
Alignment:
Q  29 agccggtcctaatttt-ttagtgagagaaactccaacttctct 70  Q
    |||||| ||||||||| ||||||||||||||||||||||||||    
T  24350695 agccggccctaatttttttagtgagagaaactccaacttctct 24350737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 1485356 - 1485303
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    |||||||| || |||||||| || | | ||||||||||||||||||||||||||    
T  1485356 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcagcgtt 1485303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 4530040 - 4530104
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||||||||||| ||| ||| |||| |||||| | |||||  |||||||||||||||||    
T  4530040 gtgatttcgtcgtctaagtacggtgttgtgttattcgtcat-ttgtgtggcgtttgattttgcgtc 4530104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 6001999 - 6002052
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    ||||||||||| ||| |||| |||| | |||||||||||||||||||| |||||    
T  6001999 gtgatttcgtcatctgagtgtggcggtttgttgttcgtcgtcttgtgcggcgtt 6002052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 123
Target Start/End: Original strand, 24770055 - 24770120
Alignment:
Q  58 ctccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttt 123  Q
    |||||||||||||| |||| ||||||||| ||| |||||| ||  || ||| ||||||||||||||    
T  24770055 ctccaacttctctctaaactttctttctcattcgttcatcgagacggggtgattttaggtcatttt 24770120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 267
Target Start/End: Original strand, 27997054 - 27997099
Alignment:
Q  222 atttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgca 267  Q
    |||||||||||| |||||||| || ||||||||||| |||||||||    
T  27997054 atttcgtcgtctgagtgcggcattgtgttgttcgtcatcttgtgca 27997099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 22087137 - 22087193
Alignment:
Q  78 ttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    |||||||||||||||| ||| | ||||  ||||||| ||||||||||||| ||||||    
T  22087137 ttctttctccttcatttatcgaagagggatggtttttggtcattttttgacctagaa 22087193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 62; Significance: 8e-27; HSPs: 2)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 42 - 147
Target Start/End: Complemental strand, 2279 - 2174
Alignment:
Q  42 tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccc 141  Q
    ||||||| |||||||||||||||||||||| |||| || |||||||||| |||||| |||||| ||||||||| |||||||||||||||||||  | |||    
T  2279 tttttagagagagaaactccaacttctctctaaactttttttctccttcgttcatcgaggaggagtggttttaagtcattttttgatctagaatcacccc 2180  T
Q  142 tctaca 147  Q
    ||||||    
T  2179 tctaca 2174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 2101 - 2042
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    |||||||| ||||||||||||||| || |||||||||||||||| ||  |||||||||||    
T  2101 gtgatttcatcgtctaagtgcggcattttgttgttcgtcgtcttatgtggcgtttgattt 2042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 62; Significance: 8e-27; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 29 - 134
Target Start/End: Complemental strand, 72184 - 72079
Alignment:
Q  29 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat 128  Q
    |||||| |||| |||| ||||| |||||||| ||||||||||| |||| ||||||||||||| |||||| |||||| ||||||||||||||||||||||     
T  72184 agccggccctagttttctagtgggagaaacttcaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgac 72085  T
Q  129 ctagaa 134  Q
    ||||||    
T  72084 ctagaa 72079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 71992 - 71933
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattt 278  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||| | |||||||||    
T  71992 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgttgtcttgtgcggagtttgattt 71933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 134
Target Start/End: Original strand, 1120 - 1218
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    |||| |||||||||||| |||||| ||||||||||| |||  ||||||||||||| |||||| |||||  |||||||||||||||||||||| ||||||    
T  1120 cctagttttttagtgagtgaaacttcaacttctctctaaattttctttctccttcgttcatcgaggagaggtggttttaggtcattttttgacctagaa 1218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 1305 - 1370
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||  ||||||||||| |||||    
T  1305 gtgatttcttcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgtggcgtttgatttcgcgtc 1370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 32875 - 32810
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||    
T  32875 gtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtttgatttcgcgtc 32810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 36 - 127
Target Start/End: Complemental strand, 33061 - 32970
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    |||| |||| ||||||||||||||| |||||||||| |||| |||||||| |||| || ||| |||||| ||||||||||||||||||||||    
T  33061 cctagttttctagtgagagaaactctaacttctctctaaactttctttcttcttcgtttatcgaggaggagtggttttaggtcattttttga 32970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 15141 - 15053
Alignment:
Q  46 tagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    |||||||||||||||||| ||||||| |||| |||||||||||||||||||| |||| ||||||  |||||| ||||||||| ||||||    
T  15141 tagtgagagaaactccaatttctctctaaactttctttctccttcattcatcgaggatgtgtggggttaggttattttttgacctagaa 15053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 29 - 147
Target Start/End: Original strand, 50555 - 50673
Alignment:
Q  29 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat 128  Q
    |||||| |||| |||| ||||| ||||||||||||||||| || |||| ||||||||||||| |||||  |||||| ||| |||||||||| |||||||     
T  50555 agccggccctagttttctagtgggagaaactccaacttctttctaaactttctttctccttcgttcattgaggaggggtgattttaggtcactttttgac 50654  T
Q  129 ctagaactagccctctaca 147  Q
    ||||||  | |||||||||    
T  50655 ctagaatcatccctctaca 50673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 253
Target Start/End: Original strand, 50747 - 50781
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgtt 253  Q
    ||||||||||||||||||||||||||| |||||||    
T  50747 gtgatttcgtcgtctaagtgcggcgttgtgttgtt 50781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 45 - 125
Target Start/End: Complemental strand, 2121 - 2041
Alignment:
Q  45 ttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt 125  Q
    |||||||||||||||||||||||| ||||||| |||||||| ||||||||||  ||||| |||| ||||||||| ||||||    
T  2121 ttagtgagagaaactccaacttctttcaaaactttctttcttcttcattcattgaggagatgtgtttttaggtcttttttt 2041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 8473 - 8538
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||| ||||||||||||||| | |||||| ||||||||||||||||||||||| |||||    
T  8473 gtgatttcgtcatctaagtgcggcgttgtattgttcatcgtcttgtgcagcgtttgatttcgcgtc 8538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 10170 - 10105
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    |||||||||||||||||||||||| || | |||||||||||||||||| ||||||||||| |||||    
T  10170 gtgatttcgtcgtctaagtgcggctttgttttgttcgtcgtcttgtgcggcgtttgatttcgcgtc 10105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 19348 - 19261
Alignment:
Q  36 cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt 124  Q
    ||||||||||||||||||||||||||||||||||||  ||  ||||||||| |||| ||||| |||||| ||||||||| ||| |||||    
T  19348 cctaattttttagtgagagaaactccaacttctctc-taattttctttctctttcactcatcgaggaggggtggttttatgtcgttttt 19261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 127
Target Start/End: Complemental strand, 58387 - 58301
Alignment:
Q  41 ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    ||||||||||||||||||||||||||||||| ||   ||| || || |||| || || |||||| ||||||||||||||||||||||    
T  58387 ttttttagtgagagaaactccaacttctctctaagttttcgttttctttcactcgtcgaggaggggtggttttaggtcattttttga 58301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 259
Target Start/End: Complemental strand, 58207 - 58167
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgt 259  Q
    |||||||| |||||| ||||||||||| |||||||||||||    
T  58207 gtgatttcatcgtctgagtgcggcgttgtgttgttcgtcgt 58167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 134
Target Start/End: Original strand, 7500 - 7591
Alignment:
Q  42 tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    ||||||||||| ||||||||  |||||||| ||   |||||||||||| ||||||| ||||||  ||||||||||||||||||||| ||||||    
T  7500 tttttagtgagggaaactccg-cttctctctaagttttctttctcctttattcatcgaggagggatggttttaggtcattttttgacctagaa 7591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 53 - 123
Target Start/End: Original strand, 10672 - 10742
Alignment:
Q  53 agaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttt 123  Q
    |||||||| |||||||||| |||| | ||| |||||||||||||| |||||  ||||||||||||||||||    
T  10672 agaaactctaacttctctctaaacttgcttcctccttcattcatcgaggagaggtggttttaggtcatttt 10742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 127
Target Start/End: Complemental strand, 25649 - 25551
Alignment:
Q  29 agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga 127  Q
    |||||| |||| |||| |||||||||||||| |||||| |||| |||     |||||||||| |||||| |||||| ||||||||| ||||||||||||    
T  25649 agccggccctagttttctagtgagagaaacttcaacttttctctaaaaaaattttctccttcgttcatcgaggaggggtggttttatgtcattttttga 25551  T

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Target: scaffold0050 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 219 - 281
Target Start/End: Complemental strand, 66170 - 66108
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgc 281  Q
    ||||||| ||||||||||||| ||||| |||||||||||||||||||  |||| |||||||||    
T  66170 gtgattttgtcgtctaagtgcagcgttatgttgttcgtcgtcttgtgtggcgtctgattttgc 66108  T

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Target: scaffold0888 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 1813 - 1768
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgt 264  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||    
T  1813 gtgatttcgtcgtcttagtgcgacgttctgttgttcgtcgtcttgt 1768  T

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Target: scaffold0492 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 134
Target Start/End: Original strand, 12721 - 12790
Alignment:
Q  65 ttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa 134  Q
    |||||||  ||| ||||||||| || |||||||||||||  |||||||||||||||||||||| ||||||    
T  12721 ttctctcttaactttctttctctttgattcatcaaggagaggtggttttaggtcattttttgacctagaa 12790  T

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Target: scaffold0049 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 284
Target Start/End: Complemental strand, 71425 - 71363
Alignment:
Q  222 atttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgtc 284  Q
    ||||||||||||||| |||||||| ||||||| |||| ||||||||||  ||||||| |||||    
T  71425 atttcgtcgtctaagggcggcgttgtgttgttagtcgacttgtgcagcagttgatttcgcgtc 71363  T

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Target: scaffold0128 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 283
Target Start/End: Original strand, 36791 - 36855
Alignment:
Q  219 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtttgattttgcgt 283  Q
    |||||| |||||||||| || |||||| ||||| | |||||||||||| ||||||||||| ||||    
T  36791 gtgattccgtcgtctaattgtggcgttgtgttggtagtcgtcttgtgcggcgtttgatttcgcgt 36855  T

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Target: scaffold0039 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 93065 - 93117
Alignment:
Q  220 tgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcagcgtt 272  Q
    |||||||||||||| ||||| ||||| ||||||| || ||||||||| |||||    
T  93065 tgatttcgtcgtctgagtgctgcgttgtgttgtttgttgtcttgtgcggcgtt 93117  T

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