View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8591_low_21 (Length: 295)

Name: NF8591_low_21
Description: NF8591
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8591_low_21
NF8591_low_21
[»] chr4 (49 HSPs)
chr4 (1-285)||(52568151-52568435)
chr4 (122-266)||(26329921-26330066)
chr4 (155-282)||(31229293-31229421)
chr4 (122-273)||(52181720-52181872)
chr4 (99-274)||(8408826-8409003)
chr4 (116-243)||(26330005-26330132)
chr4 (122-282)||(5387131-5387292)
chr4 (116-239)||(43098414-43098537)
chr4 (121-281)||(52183392-52183544)
chr4 (116-242)||(22025301-22025426)
chr4 (124-240)||(9320017-9320133)
chr4 (159-269)||(22025095-22025206)
chr4 (121-228)||(41735816-41735923)
chr4 (121-228)||(43098365-43098472)
chr4 (127-277)||(19681203-19681350)
chr4 (125-228)||(2788928-2789031)
chr4 (156-243)||(2788973-2789060)
chr4 (126-234)||(35046437-35046545)
chr4 (180-282)||(52567746-52567849)
chr4 (159-237)||(26329805-26329883)
chr4 (116-266)||(43098181-43098328)
chr4 (121-209)||(19631767-19631855)
chr4 (156-238)||(35046550-35046632)
chr4 (116-209)||(2788789-2788882)
chr4 (168-271)||(8408393-8408497)
chr4 (121-192)||(26329936-26330007)
chr4 (116-243)||(41735752-41735878)
chr4 (124-228)||(2909182-2909286)
chr4 (124-212)||(22025271-22025358)
chr4 (180-274)||(19632212-19632306)
chr4 (158-239)||(36890450-36890533)
chr4 (180-258)||(42116050-42116129)
chr4 (148-228)||(36890502-36890583)
chr4 (185-269)||(36890618-36890703)
chr4 (116-229)||(52865955-52866068)
chr4 (185-228)||(52866367-52866410)
chr4 (244-282)||(30543095-30543133)
chr4 (185-238)||(2508270-2508323)
chr4 (185-277)||(5387584-5387677)
chr4 (121-189)||(52181779-52181847)
chr4 (171-265)||(35023955-35024050)
chr4 (121-192)||(52567747-52567818)
chr4 (122-192)||(8408407-8408477)
chr4 (216-277)||(44915937-44915999)
chr4 (124-189)||(9320077-9320142)
chr4 (230-274)||(19631871-19631916)
chr4 (116-192)||(19632235-19632310)
chr4 (116-192)||(35023745-35023821)
chr4 (125-173)||(35046555-35046603)
[»] chr8 (65 HSPs)
chr8 (125-274)||(9276960-9277109)
chr8 (116-267)||(9770768-9770920)
chr8 (122-277)||(30576632-30576788)
chr8 (121-269)||(36359904-36360053)
chr8 (116-269)||(45017745-45017899)
chr8 (122-282)||(23553359-23553520)
chr8 (99-273)||(9276462-9276639)
chr8 (121-277)||(39701365-39701522)
chr8 (116-288)||(44041249-44041422)
chr8 (121-282)||(39700888-39701050)
chr8 (122-277)||(25730095-25730252)
chr8 (116-282)||(16197027-16197194)
chr8 (116-269)||(29794238-29794392)
chr8 (116-274)||(8713844-8714003)
chr8 (121-282)||(25737107-25737269)
chr8 (124-277)||(25737581-25737736)
chr8 (116-266)||(30576150-30576301)
chr8 (121-229)||(40553260-40553368)
chr8 (122-229)||(11113555-11113662)
chr8 (124-243)||(43422864-43422983)
chr8 (116-243)||(43423100-43423226)
chr8 (125-282)||(31169452-31169609)
chr8 (115-237)||(36360088-36360210)
chr8 (122-229)||(9770565-9770672)
chr8 (180-273)||(13771843-13771937)
chr8 (124-277)||(23553840-23553994)
chr8 (122-273)||(8714330-8714482)
chr8 (116-236)||(40553313-40553433)
chr8 (124-228)||(41190293-41190397)
chr8 (156-277)||(4613778-4613900)
chr8 (116-229)||(14871368-14871482)
chr8 (156-277)||(40552800-40552922)
chr8 (185-277)||(13771425-13771518)
chr8 (116-209)||(29792559-29792652)
chr8 (185-288)||(5358650-5358754)
chr8 (121-229)||(6236250-6236358)
chr8 (149-236)||(39700856-39700943)
chr8 (121-228)||(43422921-43423028)
chr8 (116-237)||(45017934-45018053)
chr8 (116-200)||(36314697-36314781)
chr8 (180-274)||(35433899-35433994)
chr8 (180-266)||(35434313-35434400)
chr8 (180-247)||(36360138-36360205)
chr8 (168-237)||(9770662-9770731)
chr8 (125-265)||(16208674-16208815)
chr8 (180-272)||(34686875-34686968)
chr8 (156-209)||(43423074-43423127)
chr8 (182-282)||(6235793-6235895)
chr8 (182-236)||(9277058-9277112)
chr8 (116-189)||(13771868-13771941)
chr8 (116-192)||(35434328-35434404)
chr8 (180-227)||(23179049-23179096)
chr8 (121-192)||(23553418-23553489)
chr8 (121-192)||(30576658-30576729)
chr8 (180-247)||(36359903-36359970)
chr8 (216-277)||(44040860-44040922)
chr8 (116-193)||(29030175-29030252)
chr8 (103-192)||(44040808-44040896)
chr8 (180-240)||(25737106-25737166)
chr8 (180-240)||(31169555-31169614)
chr8 (180-236)||(39701467-39701523)
chr8 (180-248)||(43423154-43423222)
chr8 (180-242)||(14871416-14871478)
chr8 (192-236)||(9770575-9770619)
chr8 (120-192)||(39701391-39701463)
[»] chr2 (35 HSPs)
chr2 (116-282)||(36196462-36196627)
chr2 (116-282)||(27893519-27893686)
chr2 (102-274)||(31264125-31264301)
chr2 (156-272)||(19080667-19080784)
chr2 (122-267)||(34336039-34336185)
chr2 (107-240)||(30907063-30907196)
chr2 (116-242)||(31263923-31264049)
chr2 (121-237)||(30907137-30907253)
chr2 (116-269)||(30907288-30907440)
chr2 (126-228)||(37542956-37543057)
chr2 (157-247)||(39376401-39376491)
chr2 (157-277)||(11871714-11871835)
chr2 (121-229)||(27893038-27893146)
chr2 (125-240)||(8260392-8260507)
chr2 (185-282)||(20535509-20535608)
chr2 (97-239)||(34336276-34336419)
chr2 (116-241)||(16781049-16781175)
chr2 (172-276)||(15506040-15506145)
chr2 (121-228)||(31263988-31264095)
chr2 (121-228)||(34429684-34429791)
chr2 (122-229)||(41265257-41265364)
chr2 (180-275)||(42117172-42117268)
chr2 (125-194)||(19081055-19081124)
chr2 (156-229)||(20535966-20536039)
chr2 (124-221)||(37543100-37543197)
chr2 (120-228)||(34336227-34336335)
chr2 (185-243)||(30907081-30907139)
chr2 (168-209)||(37543048-37543089)
chr2 (180-243)||(31263927-31263990)
chr2 (185-247)||(19081062-19081124)
chr2 (168-229)||(5116895-5116956)
chr2 (230-282)||(27893138-27893191)
chr2 (116-229)||(39376172-39376284)
chr2 (168-228)||(5116946-5117006)
chr2 (180-251)||(34429683-34429755)
[»] chr6 (37 HSPs)
chr6 (121-282)||(10862545-10862708)
chr6 (125-269)||(32417684-32417829)
chr6 (125-269)||(32423525-32423670)
chr6 (116-282)||(11527535-11527693)
chr6 (125-247)||(16168685-16168807)
chr6 (156-277)||(17180102-17180224)
chr6 (121-263)||(20575416-20575559)
chr6 (116-229)||(16168464-16168577)
chr6 (116-239)||(32417468-32417591)
chr6 (116-239)||(32423309-32423432)
chr6 (122-282)||(24139466-24139626)
chr6 (103-229)||(9902277-9902404)
chr6 (121-228)||(16168644-16168751)
chr6 (125-274)||(10962746-10962896)
chr6 (168-238)||(20575600-20575670)
chr6 (116-229)||(2839624-2839737)
chr6 (121-229)||(2840064-2840172)
chr6 (155-282)||(17179662-17179790)
chr6 (128-282)||(9946672-9946818)
chr6 (116-282)||(28630584-28630742)
chr6 (180-277)||(9901962-9902060)
chr6 (124-229)||(20575660-20575763)
chr6 (156-272)||(11528013-11528130)
chr6 (125-228)||(32417537-32417640)
chr6 (125-228)||(32423378-32423481)
chr6 (185-277)||(10407317-10407410)
chr6 (124-192)||(11528034-11528102)
chr6 (97-192)||(9901939-9902034)
chr6 (185-273)||(10407709-10407799)
chr6 (115-192)||(10407307-10407384)
chr6 (180-251)||(2839628-2839700)
chr6 (180-240)||(2840113-2840173)
chr6 (191-277)||(17132178-17132265)
chr6 (121-192)||(17180128-17180199)
chr6 (180-243)||(20575415-20575478)
chr6 (121-176)||(20575602-20575657)
chr6 (180-224)||(10862665-10862709)
[»] chr1 (34 HSPs)
chr1 (116-274)||(48352708-48352867)
chr1 (125-282)||(27351059-27351217)
chr1 (102-239)||(29419051-29419189)
chr1 (116-274)||(10686680-10686839)
chr1 (159-282)||(8902803-8902927)
chr1 (122-282)||(34254504-34254665)
chr1 (122-243)||(44964072-44964192)
chr1 (116-269)||(1765693-1765846)
chr1 (121-276)||(10685852-10685999)
chr1 (116-222)||(11897841-11897947)
chr1 (98-239)||(17898850-17898992)
chr1 (156-269)||(44963878-44963992)
chr1 (122-229)||(49650578-49650686)
chr1 (125-239)||(1765930-1766044)
chr1 (121-235)||(17898794-17898908)
chr1 (159-229)||(49651013-49651083)
chr1 (155-274)||(4772612-4772723)
chr1 (116-229)||(27351547-27351660)
chr1 (125-237)||(44964018-44964130)
chr1 (125-228)||(1765881-1765984)
chr1 (180-243)||(11897845-11897908)
chr1 (185-272)||(39302339-39302427)
chr1 (192-282)||(48352272-48352366)
chr1 (156-203)||(4030342-4030390)
chr1 (120-192)||(27351114-27351186)
chr1 (180-282)||(8903237-8903340)
chr1 (169-242)||(34254998-34255070)
chr1 (185-268)||(2965499-2965583)
chr1 (116-192)||(8903268-8903344)
chr1 (180-247)||(10685851-10685918)
chr1 (177-229)||(4772171-4772223)
chr1 (120-192)||(8902824-8902896)
chr1 (180-236)||(27351054-27351110)
chr1 (180-236)||(39302753-39302809)
[»] chr7 (80 HSPs)
chr7 (122-282)||(35214811-35214973)
chr7 (104-282)||(1441400-1441571)
chr7 (124-267)||(19925311-19925455)
chr7 (121-277)||(5559111-5559270)
chr7 (124-229)||(31893257-31893362)
chr7 (121-264)||(5805042-5805186)
chr7 (116-243)||(33879514-33879641)
chr7 (122-239)||(21433149-21433266)
chr7 (116-282)||(1286369-1286534)
chr7 (121-267)||(23150643-23150790)
chr7 (121-282)||(27995065-27995227)
chr7 (122-275)||(28256498-28256652)
chr7 (125-282)||(33235042-33235200)
chr7 (121-282)||(39959152-39959314)
chr7 (124-275)||(1349114-1349269)
chr7 (116-229)||(5559630-5559742)
chr7 (116-275)||(20366048-20366206)
chr7 (156-266)||(34951266-34951377)
chr7 (168-277)||(10619851-10619961)
chr7 (122-228)||(22876867-22876972)
chr7 (156-273)||(31175924-31176042)
chr7 (103-240)||(40904677-40904814)
chr7 (122-264)||(1346485-1346624)
chr7 (103-229)||(31893488-31893615)
chr7 (116-277)||(8039662-8039807)
chr7 (116-269)||(21413081-21413234)
chr7 (122-274)||(35215290-35215443)
chr7 (116-240)||(21412865-21412989)
chr7 (168-274)||(23679497-23679603)
chr7 (121-239)||(36566282-36566400)
chr7 (125-269)||(20101831-20101974)
chr7 (116-229)||(28256949-28257062)
chr7 (168-239)||(21433337-21433408)
chr7 (156-274)||(33235518-33235637)
chr7 (116-206)||(39958686-39958776)
chr7 (122-238)||(21412931-21413047)
chr7 (116-228)||(34951475-34951587)
chr7 (156-243)||(5805592-5805679)
chr7 (125-282)||(20183778-20183935)
chr7 (122-228)||(41020137-41020242)
chr7 (156-237)||(4187545-4187626)
chr7 (125-237)||(21433278-21433391)
chr7 (156-274)||(42990539-42990658)
chr7 (121-282)||(8040114-8040266)
chr7 (164-229)||(10620238-10620303)
chr7 (116-241)||(19925104-19925228)
chr7 (121-257)||(20366521-20366658)
chr7 (156-237)||(36566377-36566458)
chr7 (168-267)||(4187663-4187763)
chr7 (167-265)||(6220351-6220449)
chr7 (121-228)||(33879470-33879576)
chr7 (211-277)||(1286768-1286834)
chr7 (122-176)||(1441011-1441065)
chr7 (180-273)||(28104300-28104394)
chr7 (206-282)||(27995538-27995615)
chr7 (185-237)||(1441014-1441066)
chr7 (95-214)||(5075325-5075444)
chr7 (180-243)||(5805041-5805104)
chr7 (127-239)||(29591057-29591171)
chr7 (121-192)||(35214871-35214942)
chr7 (122-192)||(19925327-19925397)
chr7 (122-228)||(34951415-34951521)
chr7 (121-203)||(40904755-40904837)
chr7 (180-240)||(5559110-5559171)
chr7 (99-192)||(28104279-28104372)
chr7 (168-228)||(31893438-31893498)
chr7 (155-223)||(33879349-33879417)
chr7 (121-192)||(5805583-5805654)
chr7 (120-195)||(21433207-21433282)
chr7 (121-192)||(31175946-31176017)
chr7 (180-243)||(31893534-31893597)
chr7 (121-192)||(34951291-34951362)
chr7 (180-243)||(36566281-36566344)
chr7 (186-229)||(36566525-36566568)
chr7 (185-243)||(31893258-31893316)
chr7 (182-243)||(33235039-33235100)
chr7 (124-176)||(4187573-4187625)
chr7 (124-192)||(10619867-10619935)
chr7 (180-228)||(27995064-27995112)
chr7 (180-236)||(34951527-34951583)
[»] chr5 (42 HSPs)
chr5 (125-275)||(36418365-36418516)
chr5 (116-274)||(20728527-20728686)
chr5 (116-270)||(13543083-13543241)
chr5 (122-274)||(30738223-30738377)
chr5 (155-282)||(18248996-18249124)
chr5 (156-282)||(5734502-5734628)
chr5 (103-269)||(6336298-6336458)
chr5 (121-277)||(5734944-5735100)
chr5 (124-237)||(32660266-32660379)
chr5 (156-276)||(30737779-30737900)
chr5 (121-237)||(6336147-6336263)
chr5 (180-274)||(32459430-32459525)
chr5 (102-228)||(35189898-35190024)
chr5 (121-243)||(18951307-18951429)
chr5 (124-229)||(26275511-26275616)
chr5 (156-243)||(32660238-32660325)
chr5 (116-277)||(13538468-13538625)
chr5 (122-229)||(36417891-36417998)
chr5 (116-273)||(13543569-13543727)
chr5 (185-274)||(20729010-20729100)
chr5 (122-203)||(38405573-38405654)
chr5 (189-272)||(18238306-18238390)
chr5 (185-282)||(35891219-35891317)
chr5 (180-229)||(31813954-31814003)
chr5 (121-264)||(1722504-1722648)
chr5 (180-240)||(18951306-18951366)
chr5 (156-227)||(35190426-35190497)
chr5 (116-239)||(14235567-14235688)
chr5 (116-192)||(32459426-32459502)
chr5 (180-243)||(6336146-6336209)
chr5 (121-192)||(36418389-36418460)
chr5 (122-203)||(18951368-18951449)
chr5 (122-274)||(19278710-19278862)
chr5 (185-273)||(32459822-32459911)
chr5 (172-282)||(1722933-1723044)
chr5 (185-240)||(26275512-26275567)
chr5 (185-277)||(26275971-26276055)
chr5 (125-192)||(30737808-30737875)
chr5 (180-243)||(36418458-36418521)
chr5 (185-236)||(38405600-38405651)
chr5 (185-274)||(18237920-18238010)
chr5 (185-239)||(31813894-31813948)
[»] chr3 (20 HSPs)
chr3 (100-282)||(31247602-31247786)
chr3 (156-282)||(4276174-4276301)
chr3 (121-204)||(21377036-21377119)
chr3 (155-277)||(35555565-35555688)
chr3 (102-203)||(50530230-50530332)
chr3 (168-229)||(4276628-4276689)
chr3 (116-276)||(3088066-3088218)
chr3 (116-282)||(21376565-21376732)
chr3 (122-224)||(14964648-14964749)
chr3 (185-272)||(19153885-19153974)
chr3 (185-269)||(54456679-54456764)
chr3 (124-237)||(54456799-54456912)
chr3 (98-192)||(54456651-54456746)
chr3 (185-282)||(31247195-31247292)
chr3 (180-282)||(14629288-14629382)
chr3 (192-273)||(21410273-21410355)
chr3 (185-267)||(24707475-24707558)
chr3 (160-240)||(5505741-5505822)
chr3 (122-228)||(5505692-5505800)
chr3 (156-251)||(54456844-54456940)
[»] scaffold0070 (2 HSPs)
scaffold0070 (121-277)||(28548-28705)
scaffold0070 (180-251)||(28547-28619)
[»] scaffold0019 (4 HSPs)
scaffold0019 (116-247)||(124351-124482)
scaffold0019 (121-209)||(124329-124417)
scaffold0019 (116-237)||(124142-124262)
scaffold0019 (180-242)||(124146-124208)
[»] scaffold0746 (3 HSPs)
scaffold0746 (156-277)||(498-620)
scaffold0746 (121-282)||(25-186)
scaffold0746 (121-192)||(524-595)
[»] scaffold0041 (2 HSPs)
scaffold0041 (103-240)||(45204-45341)
scaffold0041 (121-203)||(45181-45263)
[»] scaffold0027 (2 HSPs)
scaffold0027 (101-277)||(9377-9546)
scaffold0027 (121-223)||(9891-9993)
[»] scaffold0374 (3 HSPs)
scaffold0374 (180-277)||(16176-16274)
scaffold0374 (185-282)||(16565-16663)
scaffold0374 (116-192)||(16172-16248)


Alignment Details
Target: chr4 (Bit Score: 205; Significance: 1e-112; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 285
Target Start/End: Complemental strand, 52568435 - 52568151
Alignment:
Q  1 tatatacacggataaagattcaaactcaaactctcatttattcatacataaaaatgtgggttccagtcactagactacttgacgaaattactattatatt 100  Q
    |||||||| || |||||||||||||||| |||||||||||||||||||||||||| |||| || || ||||||||||||||| ||| |||||||||||||    
T  52568435 tatatacatgggtaaagattcaaactcacactctcatttattcatacataaaaatatgggctctagccactagactacttgatgaagttactattatatt 52568336  T
Q  101 ttaggtcaaaaatcattttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaa 200  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||| ||||    
T  52568335 ttaggtcaaaaatcattttagtcattttagtttgacataactcccaatttagtactttaaatttcaaaagtttcaattaggtcattttagtttgatagaa 52568236  T
Q  201 ttcccaagtcagtcatttaagtttcaaatgtttcaaataggtcttttaattgataaactatttcaccgttacccctgatgtccat 285  Q
    ||| |||||||||| ||||||||||||| ||||||||||| || |||| ||||||||||||||||||||||||||||||||||||    
T  52568235 ttctcaagtcagtcctttaagtttcaaaagtttcaaatagatcctttagttgataaactatttcaccgttacccctgatgtccat 52568151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 122 - 266
Target Start/End: Complemental strand, 26330066 - 26329921
Alignment:
Q  122 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 221  Q
    |||||||||||| ||| || |||||| |||||  |||||||||| |||||||||| |||||| ||||||||||||| ||||||||||| |||||||||||    
T  26330066 tccttttagttttacagaattcccaagttagtcctttaagtttcaaaagtttcaaataggtccttttagtttgacataattcccaagttagtcatttaag 26329967  T
Q  222 tttcaaatgtttcaaataggtc-ttttaattgataaactatttcac 266  Q
    ||||||| |||||||||||||| ||||| |||||||||||||||||    
T  26329966 tttcaaaagtttcaaataggtcattttagttgataaactatttcac 26329921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 155 - 282
Target Start/End: Original strand, 31229293 - 31229421
Alignment:
Q  155 ttttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaatagg-tcttttaattga 253  Q
    ||||||||||||||||||||| ||||||| ||||||||||| ||||||| ||||| |||||||||||||||||| |||||||||||| ||||||| ||||    
T  31229293 ttttaagtttcgaaagtttcacttaggtctttttagtttgatagaattctcaagttagtcatttaagtttcaaaagtttcaaataggttcttttagttga 31229392  T
Q  254 taaactatttcaccgttacccctgatgtc 282  Q
    |||||||||||||||||||| ||| ||||    
T  31229393 taaactatttcaccgttacctctgctgtc 31229421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 122 - 273
Target Start/End: Original strand, 52181720 - 52181872
Alignment:
Q  122 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 221  Q
    |||||||||||||||| || || ||| |||||  ||||| ||| |||||||||||| | ||| ||||||||||||||||||||||||| |||| ||||||    
T  52181720 tccttttagtttgacaaaattctcaagttagttctttaaattttgaaagtttcaatcatgtccttttagtttgacagaattcccaagttagtcctttaag 52181819  T
Q  222 tttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacc 273  Q
    ||||||| |||||||| | ||| ||||||||||||||||||||||||||||||    
T  52181820 tttcaaaagtttcaaacatgtcattttaattgataaactatttcaccgttacc 52181872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 99 - 274
Target Start/End: Complemental strand, 8409003 - 8408826
Alignment:
Q  99 ttttaggtcaaaaatca-ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgaca 197  Q
    |||| ||||||| |||| |||| ||| |||||||||||||||| || ||| |||||  |||||||||||||| ||||||| | ||  |||||||||||||    
T  8409003 tttttggtcaaatatcacttttggtcattttagtttgacataattctcaagttagtcatttaagtttcgaaaatttcaatgatgttcttttagtttgaca 8408904  T
Q  198 gaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttaccc 274  Q
    |||||  ||||| |||||||||||||||||| |||||||||||||| | ||| ||||||||||||||||||| |||||    
T  8408903 gaattttcaagttagtcatttaagtttcaaaagtttcaaataggtcatcttagttgataaactatttcaccgctaccc 8408826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 26330132 - 26330005
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||||||||||||||||||||| || || ||| |||||  ||||||||| ||||||||||||||| || ||||||||| ||||||||||||||| ||||     
T  26330132 ttttagtccttttagtttgacagaattctcaagttagtcctttaagttttgaaagtttcaattagatccttttagttttacagaattcccaagttagtcc 26330033  T
Q  216 tttaagtttcaaatgtttcaaataggtc 243  Q
    ||||||||||||| ||||||||||||||    
T  26330032 tttaagtttcaaaagtttcaaataggtc 26330005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 122 - 282
Target Start/End: Original strand, 5387131 - 5387292
Alignment:
Q  122 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 221  Q
    |||||||||||||||  || | | || |||||  |||||||||  |||||||||||||  |||||||||||||||||||||||||||| || | ||||||    
T  5387131 tccttttagtttgactgaatttctaagttagtcctttaagttttaaaagtttcaattatatcattttagtttgacagaattcccaagttagccctttaag 5387230  T
Q  222 tttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 282  Q
    ||||||| ||||||||||| || ||||| ||||||||| |||||||||||||||||| ||||    
T  5387231 tttcaaaagtttcaaatagatctttttagttgataaacaatttcaccgttacccctgctgtc 5387292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 116 - 239
Target Start/End: Complemental strand, 43098537 - 43098414
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||| ||||||||||||||||| || | | || |||||  |||||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||     
T  43098537 ttttggtccttttagtttgacagaatttctaacttagttctttaagtttcgaaagtttcaattaggtccttttagtttgacaaaattcccaagttagtcc 43098438  T
Q  216 tttaagtttcaaatgtttcaaata 239  Q
    ||||||||||||| ||||||||||    
T  43098437 tttaagtttcaaaagtttcaaata 43098414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 121 - 281
Target Start/End: Complemental strand, 52183544 - 52183392
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 220  Q
    ||||||||||||| ||| || || ||| |||||  |||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||| |||||    
T  52183544 gtccttttagttttacaaaattctcaagttagtcctttaagtttcgaaagtttcaattaggcccttttagtttgacagaattcccaagccagtcctttaa 52183445  T
Q  221 gtttcaaatgtttcaaataggtcttttaa-ttgataaactatttcaccgttacccctgatgt 281  Q
    |||||         ||||| || |||||| ||||||||||||||||||||||||||||||||    
T  52183444 gtttc---------aaataagttttttaagttgataaactatttcaccgttacccctgatgt 52183392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 116 - 242
Target Start/End: Complemental strand, 22025426 - 22025301
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||||||| |||||||||||||||| |  ||| |||||  || ||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||     
T  22025426 ttttagtcattttagtttgacataattatcaagttagtccttgaagtttcgaaagtttcaattaggttcttttagtttgacagaattcccaagttagtcc 22025327  T
Q  216 tttaagtttcaaatgtttcaaataggt 242  Q
    |||||| |||||| |||||||||||||    
T  22025326 tttaag-ttcaaaggtttcaaataggt 22025301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 124 - 240
Target Start/End: Original strand, 9320017 - 9320133
Alignment:
Q  124 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtt 223  Q
    |||||||||||||| || || ||| ||||| ||||||||||||||||||||||||| ||  ||||||||||||||||||| ||| | |||||||||| ||    
T  9320017 cttttagtttgacaaaattctcaagttagttttttaagtttcgaaagtttcaattaagttcttttagtttgacagaattctcaatttagtcatttaaatt 9320116  T
Q  224 tcaaatgtttcaaatag 240  Q
    ||||| |||||||||||    
T  9320117 tcaaaagtttcaaatag 9320133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 159 - 269
Target Start/End: Original strand, 22025095 - 22025206
Alignment:
Q  159 aagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaatagg-tcttttaattgataaa 257  Q
    ||||| |||||||||||||||||||||||||||||||||||||||  |||| ||||  ||||| || ||| |||||||||||| ||||||| ||||||||    
T  22025095 aagttacgaaagtttcaattaggtcattttagtttgacagaattcttaagttagtccgttaagattaaaaagtttcaaataggttcttttagttgataaa 22025194  T
Q  258 ctatttcaccgt 269  Q
    ||||||||||||    
T  22025195 ctatttcaccgt 22025206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 121 - 228
Target Start/End: Original strand, 41735816 - 41735923
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 220  Q
    ||||||||||||| |||||| |||||| |||||  |||||||||| |||||||||| |||||| |||||||||||||||||| ||||||||||| |||||    
T  41735816 gtccttttagtttaacataattcccaagttagtcctttaagtttcaaaagtttcaaataggtccttttagtttgacagaatttccaagtcagtcctttaa 41735915  T
Q  221 gtttcaaa 228  Q
     |||||||    
T  41735916 atttcaaa 41735923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 121 - 228
Target Start/End: Complemental strand, 43098472 - 43098365
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 220  Q
    ||||||||||||||||| || |||||| |||||  |||||||||| |||||||||| || ||||||||||||| ||||||||||||||| |||| |||||    
T  43098472 gtccttttagtttgacaaaattcccaagttagtcctttaagtttcaaaagtttcaaatatgtcattttagtttaacagaattcccaagttagtcctttaa 43098373  T
Q  221 gtttcaaa 228  Q
    ||||||||    
T  43098372 gtttcaaa 43098365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 127 - 277
Target Start/End: Original strand, 19681203 - 19681350
Alignment:
Q  127 ttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttca 226  Q
    ||||||||||  || || ||| ||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||     |||||| | ||    
T  19681203 ttagtttgaccgaattctcaagttagttttttaagtttcgaaattttcaattagatcattttagtttgacagaattccgaagtcc----tttaaggtgca 19681298  T
Q  227 aatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctg 277  Q
    || | |||||||||||| ||||| |||||||||||||||||| |||||||||    
T  19681299 aaggattcaaataggtcattttagttgataaactatttcaccattacccctg 19681350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 125 - 228
Target Start/End: Complemental strand, 2789031 - 2788928
Alignment:
Q  125 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 224  Q
    ||||||||||||| || |  ||| |||||  |||||||||| |||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||    
T  2789031 ttttagtttgacagaattttcaagttagtcctttaagtttcaaaagtttcaaataggtcattttagtttgacagaattctcaagttagtcatttaagttt 2788932  T
Q  225 caaa 228  Q
    ||||    
T  2788931 caaa 2788928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 2789060 - 2788973
Alignment:
Q  156 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc 243  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||  ||||| |||| ||||||||||||| ||||||||||||||    
T  2789060 tttaagttttggaagtttcaattaggtcattttagtttgacagaattttcaagttagtcctttaagtttcaaaagtttcaaataggtc 2788973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 126 - 234
Target Start/End: Original strand, 35046437 - 35046545
Alignment:
Q  126 tttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttc 225  Q
    ||||||||||||||| |  |||||||||  |||||||||||||||||| |||||| || |||||||||||||||||||| || | |||| ||||||||||    
T  35046437 tttagtttgacataattttcaatttagtcctttaagtttcgaaagttttaattagatccttttagtttgacagaattcctaaattagtcctttaagtttc 35046536  T
Q  226 aaatgtttc 234  Q
    ||| |||||    
T  35046537 aaaagtttc 35046545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 180 - 282
Target Start/End: Original strand, 52567746 - 52567849
Alignment:
Q  180 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctga 278  Q
    |||| |||||||||||||||||||  |||| |||||||||||||||||| |||| ||||||||| ||||| ||||||||||||||||| ||||| ||||     
T  52567746 ggtccttttagtttgacagaattcttaagttagtcatttaagtttcaaaagttttaaataggtcattttagttgataaactatttcactgttactcctgc 52567845  T
Q  279 tgtc 282  Q
    ||||    
T  52567846 tgtc 52567849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 237
Target Start/End: Original strand, 26329805 - 26329883
Alignment:
Q  159 aagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaa 237  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||| || | ||||||||||||| ||||||||    
T  26329805 aagtttcgaaagtttcaattaggtccttttagtttgacagaatttccaagttagccctttaagtttcaaaagtttcaaa 26329883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 266
Target Start/End: Original strand, 43098181 - 43098328
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||| ||||||||||||||||| || | | || |||||  ||||||||| |||||||||||||||||| |||||||||  |||| |||| |||| ||||     
T  43098181 ttttggtccttttagtttgacaaaatttctaagttagtcctttaagttttgaaagtttcaattaggtccttttagtttaccagagttccgaagttagtc- 43098279  T
Q  216 tttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcac 266  Q
       |||||||||| |||||||||| || |||||| |||||||||||||||||    
T  43098280 ---aagtttcaaaagtttcaaataagtccttttagttgataaactatttcac 43098328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 209
Target Start/End: Original strand, 19631767 - 19631855
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagt 209  Q
    ||||||||| ||||||| || || ||| |||||  |||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  19631767 gtccttttattttgacaaaattctcaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaattctcaagt 19631855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 156 - 238
Target Start/End: Complemental strand, 35046632 - 35046550
Alignment:
Q  156 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaat 238  Q
    |||||||||||||||||| |||| || ||||||||||||||| ||||||||||| |||| ||||||||||||| |||| ||||    
T  35046632 tttaagtttcgaaagttttaatttggccattttagtttgacataattcccaagttagtcctttaagtttcaaaagttttaaat 35046550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 116 - 209
Target Start/End: Original strand, 2788789 - 2788882
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagt 209  Q
    ||||| ||||||||||||||   || || ||| |||||  |||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  2788789 ttttaatccttttagtttgatgaaattctcaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaattctcaagt 2788882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 8408393 - 8408497
Alignment:
Q  168 aagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcac 266  Q
    ||||||||| ||| || ||||||||||||| ||||| ||||| |||| ||||||||| ||| |||||||||| ||| ||||| ||||||| |||||||||    
T  8408393 aagtttcaaatagatccttttagtttgacaaaattctcaagtaagtcttttaagtttgaaaagtttcaaataagtcattttagttgataagctatttcac 8408492  T
Q  267 cgtta 271  Q
    |||||    
T  8408493 cgtta 8408497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 192
Target Start/End: Complemental strand, 26330007 - 26329936
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 192  Q
    |||||||||||||||||||| |||||| |||||  |||||||||| |||||||||| |||||||||||||||    
T  26330007 gtccttttagtttgacataattcccaagttagtcatttaagtttcaaaagtttcaaataggtcattttagtt 26329936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 41735752 - 41735878
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||| ||||||||||||| |||  | || ||| |||||  ||| ||||| ||||||||||| | |||| ||||||||| ||| ||||||||||| ||||     
T  41735752 ttttggtccttttagtttaacaagattctcaagttagttcttttagttttgaaagtttcaact-ggtccttttagtttaacataattcccaagttagtcc 41735850  T
Q  216 tttaagtttcaaatgtttcaaataggtc 243  Q
    ||||||||||||| ||||||||||||||    
T  41735851 tttaagtttcaaaagtttcaaataggtc 41735878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 2909182 - 2909286
Alignment:
Q  124 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtt 223  Q
    |||||||||| ||| || || ||| |||||  |||||||||||||||| ||||||||||  ||||||||| ||||||||| ||||| |||| ||||| ||    
T  2909182 cttttagtttcacagaattctcaagttagttctttaagtttcgaaagtgtcaattaggttcttttagttttacagaattctcaagttagtcctttaaatt 2909281  T
Q  224 tcaaa 228  Q
    |||||    
T  2909282 tcaaa 2909286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 124 - 212
Target Start/End: Complemental strand, 22025358 - 22025271
Alignment:
Q  124 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcag 212  Q
    |||||||||||||| || |||||| |||||  |||||||| | || ||||||| ||||| |||||||||||||||||||| ||||||||    
T  22025358 cttttagtttgacagaattcccaagttagtcctttaagtt-caaaggtttcaaataggtaattttagtttgacagaattctcaagtcag 22025271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 274
Target Start/End: Complemental strand, 19632306 - 19632212
Alignment:
Q  180 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttaccc 274  Q
    |||| ||||||||||||||||||| ||| | |||| ||||||||||||| |||| ||||| ||| ||||| ||||||||||| ||||| |||||||    
T  19632306 ggtccttttagtttgacagaattctcaaattagtc-tttaagtttcaaaagttttaaatatgtcattttagttgataaactacttcactgttaccc 19632212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 36890450 - 36890533
Alignment:
Q  158 taagtttcgaaagtttcaattaggtca-ttttagtttgacagaattcccaag-tcagtcatttaagtttcaaatgtttcaaata 239  Q
    ||||||| ||||||||||||||| ||| |||| ||||||||||||||| ||| | |||| ||||||||||||| ||||||||||    
T  36890450 taagttttgaaagtttcaattagatcatttttggtttgacagaattccgaagtttagtcttttaagtttcaaaagtttcaaata 36890533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 258
Target Start/End: Complemental strand, 42116129 - 42116050
Alignment:
Q  180 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaac 258  Q
    |||||||||||||||||| ||||   |||| |||| ||||||||||||| |||| ||||||||| |||||||||||||||    
T  42116129 ggtcattttagtttgacaaaatttttaagttagtcctttaagtttcaaaagttttaaataggtctttttaattgataaac 42116050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 228
Target Start/End: Original strand, 36890502 - 36890583
Alignment:
Q  148 tttagtattttaagtttcgaaagtttcaattaggtca-ttttagtttgacagaattcccaagtcagtcatttaagtttcaaa 228  Q
    |||||| ||||||||||| |||||||||| || |||| ||||| ||||||| |||| |||||| |||| |||||||||||||    
T  36890502 tttagtcttttaagtttcaaaagtttcaaataagtcatttttaatttgacataatttccaagttagtcctttaagtttcaaa 36890583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 269
Target Start/End: Complemental strand, 36890703 - 36890618
Alignment:
Q  185 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgt 269  Q
    ||||||||||||||||||   |||| | |||||||||||| ||| ||||  |||||||| ||||| ||||||||||||||||||||    
T  36890703 ttttagtttgacagaatttttaagttaatcatttaagttttaaaagtttataataggtcattttagttgataaactatttcaccgt 36890618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 229
Target Start/End: Original strand, 52865955 - 52866068
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||| ||||||||||||||||| || || ||| |||||  ||||||||| |||||||| ||||| ||  ||||||||||||| ||| | |||   ||||     
T  52865955 tttttgtccttttagtttgacagaattctcaagttagtcctttaagttttgaaagtttaaattatgttcttttagtttgacaaaatgctcaatctagtcc 52866054  T
Q  216 tttaagtttcaaat 229  Q
    ||||||||||||||    
T  52866055 tttaagtttcaaat 52866068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 228
Target Start/End: Complemental strand, 52866410 - 52866367
Alignment:
Q  185 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaa 228  Q
    ||||||||||||||||||||||||| |||| |||||||||||||    
T  52866410 ttttagtttgacagaattcccaagttagtcctttaagtttcaaa 52866367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 282
Target Start/End: Complemental strand, 30543133 - 30543095
Alignment:
Q  244 ttttaattgataaactatttcaccgttacccctgatgtc 282  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  30543133 ttttaattgataaactatttcaccgttacccctgttgtc 30543095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 2508270 - 2508323
Alignment:
Q  185 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaat 238  Q
    |||||||||||||||||| |||||| |||| |||||| |||||| |||||||||    
T  2508270 ttttagtttgacagaatttccaagttagtcctttaagcttcaaaagtttcaaat 2508323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 5387677 - 5387584
Alignment:
Q  185 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctg 277  Q
    ||||||||||||| |||||  |||| || | ||||| ||| ||| |||||||||| || |||| | |||||||| |||||||||||||||||||    
T  5387677 ttttagtttgacaaaattcttaagtaagacctttaaattttaaaagtttcaaatatgtactttcacttgataaattatttcaccgttacccctg 5387584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 52181779 - 52181847
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcatttta 189  Q
    ||||||||||||||||| || |||||| |||||  |||||||||| ||||||||||  | |||||||||    
T  52181779 gtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagtttcaaacatgtcatttta 52181847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 265
Target Start/End: Complemental strand, 35024050 - 35023955
Alignment:
Q  171 tttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttca 265  Q
    ||||||||| ||| ||||||||| ||| ||||| ||||| |||| ||||||||| ||| ||||  ||| | || ||||| ||||||||||||||||    
T  35024050 tttcaattatgtctttttagttttacacaattctcaagttagtcttttaagttttaaaagtttttaattgatccttttagttgataaactatttca 35023955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 192
Target Start/End: Original strand, 52567747 - 52567818
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 192  Q
    ||||||||||||||||| || ||  || |||||  |||||||||| ||||||| || |||||||||||||||    
T  52567747 gtccttttagtttgacagaattcttaagttagtcatttaagtttcaaaagttttaaataggtcattttagtt 52567818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 192
Target Start/End: Original strand, 8408407 - 8408477
Alignment:
Q  122 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 192  Q
    |||||||||||||||| || || ||| | ||| ||||||||||  |||||||||| || ||||||||||||    
T  8408407 tccttttagtttgacaaaattctcaagtaagtcttttaagtttgaaaagtttcaaataagtcattttagtt 8408477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 277
Target Start/End: Original strand, 44915937 - 44915999
Alignment:
Q  216 tttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctg 277  Q
    ||||||||||||| |||| ||| ||||| ||||| |||||||| |||||||| ||||||||||    
T  44915937 tttaagtttcaaaagttttaaaaaggtctttttagttgataaattatttcactgttacccctg 44915999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 189
Target Start/End: Original strand, 9320077 - 9320142
Alignment:
Q  124 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcatttta 189  Q
    |||||||||||||| || || |||||||||  ||||| |||| |||||||||| ||| ||||||||    
T  9320077 cttttagtttgacagaattctcaatttagtcatttaaatttcaaaagtttcaaatagatcatttta 9320142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 274
Target Start/End: Original strand, 19631871 - 19631916
Alignment:
Q  230 gtttcaaataggtc-ttttaattgataaactatttcaccgttaccc 274  Q
    |||||||||||||| ||||| |||||||||||||| ||||||||||    
T  19631871 gtttcaaataggtcattttagttgataaactattttaccgttaccc 19631916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 19632310 - 19632235
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 192  Q
    |||| ||||||||||||||||| || || ||| ||||| ||| ||||||| ||||||| || || ||||||||||||    
T  19632310 ttttggtccttttagtttgacagaattctcaaattagtcttt-aagtttcaaaagttttaaatatgtcattttagtt 19632235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 35023745 - 35023821
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 192  Q
    |||||||||||||||||||| | || |   || ||||| ||||| ||||  |||||||||||||| |||||||||||    
T  35023745 ttttagtccttttagtttgaaagaattattaaattagtcttttacgttttaaaagtttcaattagatcattttagtt 35023821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 173
Target Start/End: Complemental strand, 35046603 - 35046555
Alignment:
Q  125 ttttagtttgacataactcccaatttagtattttaagtttcgaaagttt 173  Q
    |||||||||||||||| |||||| |||||  |||||||||| |||||||    
T  35046603 ttttagtttgacataattcccaagttagtcctttaagtttcaaaagttt 35046555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 102; Significance: 1e-50; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 125 - 274
Target Start/End: Complemental strand, 9277109 - 9276960
Alignment:
Q  125 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 224  Q
    ||||||||||||| || |||||| ||||| |||||||||||||||||||||||||| || ||||||||||| |||||| |||||| |||| |||||||||    
T  9277109 ttttagtttgacagaattcccaagttagtcttttaagtttcgaaagtttcaattagatccttttagtttgatagaatttccaagttagtcctttaagttt 9277010  T
Q  225 caaatgtttcaaataggtcttttaattgataaactatttcaccgttaccc 274  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  9277009 caaaagtttcaaataggtcttttagttgataaactatttcaccgttaccc 9276960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 116 - 267
Target Start/End: Complemental strand, 9770920 - 9770768
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||| ||||||||||||||||| || || ||| |||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||     
T  9770920 ttttggtccttttagtttgacaaaattctcaagttagtcctttaagtttcgaaagtttcaattaagtcattttagtttgacagaattcccaagttagtcc 9770821  T
Q  216 tttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcacc 267  Q
    ||||| ||||||| ||||||||||||| |||||| ||||||||||||||||||    
T  9770820 tttaattttcaaaagtttcaaataggtccttttagttgataaactatttcacc 9770768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 122 - 277
Target Start/End: Complemental strand, 30576788 - 30576632
Alignment:
Q  122 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 221  Q
    |||||||||||||||| || |  ||| ||||| || |||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||    
T  30576788 tccttttagtttgacagaattttcaagttagtcttctaagtttcaaaagtttcaattaggtccttttagtttgacagaattcccaagttagtcctttaag 30576689  T
Q  222 tttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctg 277  Q
    ||||||| |||| ||||| ||| ||||| ||||||||||||||||||||||||||||    
T  30576688 tttcaaaagttttaaatatgtcattttagttgataaactatttcaccgttacccctg 30576632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 121 - 269
Target Start/End: Original strand, 36359904 - 36360053
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 220  Q
    ||||||||||||||||| || | |||| |||||  |||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||| |||||    
T  36359904 gtccttttagtttgacagaatttccaagttagtcctttaagtttcgaaagtttcaattaggtatttttagtttgacagaattcccaagttagtcctttaa 36360003  T
Q  221 gtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgt 269  Q
    |||| ||| |||||||||||||| ||||| |||||||||||||| |||||    
T  36360004 gttttaaaagtttcaaataggtcattttagttgataaactattttaccgt 36360053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 116 - 269
Target Start/End: Original strand, 45017745 - 45017899
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||| ||||||||||||||| | || |||||| |||||  |||||||||||||||||||||||| ||||||||||||| ||||||||||||| | ||||     
T  45017745 ttttggtccttttagtttgatagaattcccaagttagtcctttaagtttcgaaagtttcaattatgtcattttagtttaacagaattcccaaattagtcc 45017844  T
Q  216 tttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgt 269  Q
    |||||| ||||||  ||||||||| ||| ||||||||||||||||||||||||||    
T  45017845 tttaagattcaaaaatttcaaataagtcattttaattgataaactatttcaccgt 45017899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 122 - 282
Target Start/End: Original strand, 23553359 - 23553520
Alignment:
Q  122 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 221  Q
    |||||||||||||||| || || ||| ||  |  |||||||||||||||||||||||||||| ||||||||||||| ||||| |||||  ||| |||||     
T  23553359 tccttttagtttgacagaattctcaacttgatcctttaagtttcgaaagtttcaattaggtccttttagtttgacaaaattctcaagttggtcttttaaa 23553458  T
Q  222 tttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 282  Q
    ||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||| ||||    
T  23553459 tttcaaaagtttcaaataggtcattttagttgataaactatttcaccgttacccctgctgtc 23553520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 99 - 273
Target Start/End: Original strand, 9276462 - 9276639
Alignment:
Q  99 ttttaggtcaaaaatca-ttttagtccttttagtttgacataactcccaatttagta-ttttaagtttcgaaagtttcaattaggtcattttagtttgac 196  Q
    ||||||| |||| |||| |||| ||||||||||||||||| || || |||  ||||  |||||||||| |||||||||||||||||| || |||||||||    
T  9276462 ttttaggccaaatatcacttttggtccttttagtttgacaaaattctcaaaatagttcttttaagttttgaaagtttcaattaggtctttatagtttgac 9276561  T
Q  197 agaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacc 273  Q
    ||||||| ||||| ||||| |||||||| ||| ||||||||||||| |||||| ||||||||||||||||| ||||||    
T  9276562 agaattctcaagttagtcagttaagttttaaaagtttcaaataggtccttttagttgataaactatttcactgttacc 9276639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 121 - 277
Target Start/End: Complemental strand, 39701522 - 39701365
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 220  Q
    ||||||||||||||||| || || ||| |||||  |||||||||| ||||||||||||| ||| ||||||||||| ||||||||||  | ||||||||||    
T  39701522 gtccttttagtttgacagaattctcaagttagttctttaagtttcaaaagtttcaattaagtccttttagtttgatagaattcccagattagtcatttaa 39701423  T
Q  221 gtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctg 277  Q
    ||||||||  |||||||||||| |||||| ||||||||||| ||||| ||||||||||    
T  39701422 gtttcaaaactttcaaataggtccttttagttgataaactacttcactgttacccctg 39701365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 116 - 288
Target Start/End: Complemental strand, 44041422 - 44041249
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||| ||||||||||||||||| || |  ||| |||||  ||||||||| |||||||||||||| ||| |||||||||||||||||||| |||| ||||     
T  44041422 tttttgtccttttagtttgacaaaattttcaagttagtcctttaagttttgaaagtttcaattatgtccttttagtttgacagaattcctaagttagtct 44041323  T
Q  216 tttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtccatctc 288  Q
    || ||||||||||  ||||||||| ||| ||||| |||||||||||||||||| |||||| ||||||| |||||    
T  44041322 ttaaagtttcaaaaatttcaaataagtcattttagttgataaactatttcaccattacccatgatgtcaatctc 44041249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 121 - 282
Target Start/End: Original strand, 39700888 - 39701050
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 220  Q
    ||||||||||||||||| || ||  || |||||  |||||||||  ||||||||||||| ||| ||||||||||||| |||||| |||| | || |||||    
T  39700888 gtccttttagtttgacaaaattcttaagttagtcctttaagttttaaaagtttcaattatgtccttttagtttgacaaaattcctaagttaatcctttaa 39700987  T
Q  221 gtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 282  Q
    |||||||| |||||||||| ||| ||||| |||||||||||||||||||||||||||| ||||    
T  39700988 gtttcaaaagtttcaaatatgtcattttagttgataaactatttcaccgttacccctgctgtc 39701050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 122 - 277
Target Start/End: Complemental strand, 25730252 - 25730095
Alignment:
Q  122 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaa-ttaggtcattttagtttgacagaattcccaagtcagtcatttaa 220  Q
    |||||||||||||| | || | |||| |||||  ||||||||| ||||||||||| ||||||||||||| ||||||||||||| ||||| |||| |||||    
T  25730252 tccttttagtttgatagaatttccaagttagtcctttaagttttgaaagtttcaaattaggtcattttaatttgacagaattctcaagttagtcctttaa 25730153  T
Q  221 gtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctg 277  Q
     ||||||| |||||||||| ||| ||||| ||||||||||||||||| ||||||||||    
T  25730152 atttcaaaagtttcaaatatgtcattttagttgataaactatttcactgttacccctg 25730095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 116 - 282
Target Start/End: Original strand, 16197027 - 16197194
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||| |||||||| |||||||| || |  ||| |||||   ||||||||||||||||||||||| ||| ||||||||||||||||||||||||| | |||    
T  16197027 ttttggtccttttcgtttgacagaattatcaagttagtccattaagtttcgaaagtttcaattatgtccttttagtttgacagaattcccaagttaatca 16197126  T
Q  216 tttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctgatgtc 282  Q
    ||||||||||||| || |||||||||| |||||| || ||||| ||||||||| |||| |||| ||||    
T  16197127 tttaagtttcaaaagtatcaaataggtccttttagttaataaattatttcaccattacgcctgttgtc 16197194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 116 - 269
Target Start/End: Complemental strand, 29794392 - 29794238
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||| ||| ||||||||||||| || |||||| |||||  ||||| ||||||||||||  |||||||| ||||||||||||| |||| |||||| ||||     
T  29794392 ttttggtcattttagtttgacagaattcccaagttagtcctttaaatttcgaaagttttcattaggtccttttagtttgacataatttccaagttagtct 29794293  T
Q  216 tttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgt 269  Q
    ||||||||||||| ||||||||||| | |||||| |||||||| |||||||||||    
T  29794292 tttaagtttcaaaagtttcaaatagatccttttagttgataaattatttcaccgt 29794238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 116 - 274
Target Start/End: Original strand, 8713844 - 8714003
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||| |||||||||||||||||||| || ||| |||||  |||||||||| |||||||||||||  |  ||||||||||||| ||||| ||||| ||||     
T  8713844 ttttggtccttttagtttgacataattctcaagttagtcctttaagtttcaaaagtttcaattaaattcttttagtttgacaaaattcacaagttagtct 8713943  T
Q  216 tttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttaccc 274  Q
    |||||||||||||  |||||||||| || ||||| |||||||| | ||||||||||||||    
T  8713944 tttaagtttcaaaaatttcaaatagatcattttagttgataaattgtttcaccgttaccc 8714003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 121 - 282
Target Start/End: Original strand, 25737107 - 25737269
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 220  Q
    |||||||||||||||||||| |  ||| |||||  |||||||||| |||||||||| ||| || |||||||||||| ||||||| |||| |||| |||||    
T  25737107 gtccttttagtttgacataattttcaagttagtcctttaagtttcaaaagtttcaaatagatccttttagtttgaccgaattcctaagttagtcctttaa 25737206  T
Q  221 gtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 282  Q
     ||||||| |||||| ||| ||| ||||| |||||||||||||||| |||||| |||| ||||    
T  25737207 atttcaaaagtttcacatatgtcattttacttgataaactatttcatcgttacacctgctgtc 25737269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 124 - 277
Target Start/End: Complemental strand, 25737736 - 25737581
Alignment:
Q  124 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaa-ttaggtcattttagtttgacagaattcccaagtcagtcatttaagt 222  Q
    |||||||||||| | || | |||| |||||  ||||||||| ||||||||||| ||||||| ||||| ||||||||||||| ||||| |||| ||||| |    
T  25737736 cttttagtttgatagaatttccaagttagtcctttaagttttgaaagtttcaaattaggtctttttaatttgacagaattctcaagttagtcctttaaat 25737637  T
Q  223 ttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctg 277  Q
    |||||| ||||||||||  || ||||| ||||||||||||||||| ||||||||||    
T  25737636 ttcaaaagtttcaaatatttcattttagttgataaactatttcactgttacccctg 25737581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 116 - 266
Target Start/End: Original strand, 30576150 - 30576301
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||| ||| |||||| |||||| || |||||| |||||  ||||| ||| |||||||||||||| ||| |||||||||| ||||||| |||||| ||||     
T  30576150 ttttggtctttttagcttgacagaattcccaagttagtcctttaaattttgaaagtttcaattaagtccttttagtttgccagaatttccaagttagtct 30576249  T
Q  216 tttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcac 266  Q
    ||||||||| ||| ||||||||| |||| ||||| |||||||||||||||||    
T  30576250 tttaagtttgaaaagtttcaaattggtctttttagttgataaactatttcac 30576301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 121 - 229
Target Start/End: Complemental strand, 40553368 - 40553260
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 220  Q
    ||||||||||||||||| || | | || ||||| ||||||||||| |||||||||||| |||| ||||||||||||||||||| ||||| | ||||||||    
T  40553368 gtccttttagtttgacaaaatttctaagttagtcttttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaa 40553269  T
Q  221 gtttcaaat 229  Q
    |||||||||    
T  40553268 gtttcaaat 40553260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 122 - 229
Target Start/End: Original strand, 11113555 - 11113662
Alignment:
Q  122 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 221  Q
    ||||||||||||||||||| ||| || |||||  ||||| ||| |||||||||||| ||||| |||||||||||||||||| |||||| |||| ||||||    
T  11113555 tccttttagtttgacataattcctaagttagtcctttaaattttgaaagtttcaatcaggtccttttagtttgacagaatttccaagttagtcctttaag 11113654  T
Q  222 tttcaaat 229  Q
    ||||||||    
T  11113655 tttcaaat 11113662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 124 - 243
Target Start/End: Original strand, 43422864 - 43422983
Alignment:
Q  124 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtt 223  Q
    |||||||||||| |||| || ||| |||||  ||||||||| |||||||||||||||||| ||||| |||  || ||||||||||| |||| ||||||||    
T  43422864 cttttagtttgatataattctcaaattagtcctttaagttttgaaagtttcaattaggtccttttattttagcaaaattcccaagttagtcctttaagtt 43422963  T
Q  224 tcaaatgtttcaaataggtc 243  Q
    ||||| ||||||||||||||    
T  43422964 tcaaaagtttcaaataggtc 43422983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 43423226 - 43423100
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||| |||||||||||||||||||| ||| || |||||  |||||||||||||||||||||||| ||| ||||||||| | ||||||| ||| | | ||     
T  43423226 ttttggtccttttagtttgacataattcctaagttagttatttaagtttcgaaagtttcaattaagtc-ttttagtttcatagaattctcaatttactcc 43423128  T
Q  216 tttaagtttcaaatgtttcaaataggtc 243  Q
    ||||||||||||| ||||||||||||||    
T  43423127 tttaagtttcaaaagtttcaaataggtc 43423100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 125 - 282
Target Start/End: Complemental strand, 31169609 - 31169452
Alignment:
Q  125 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 224  Q
    ||||||||||||| || || ||| |||||  |||||||||  |||||||||| ||| |||||||||||||||  ||||| ||| | |||| |||||||||    
T  31169609 ttttagtttgacaaaattctcaagttagtcctttaagtttt-aaagtttcaaatagatcattttagtttgacgaaattctcaaattagtcctttaagttt 31169511  T
Q  225 caaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 282  Q
     ||| |||||||||| ||| ||||| |||||||| |||||||||||||||| |||||||    
T  31169510 taaaagtttcaaatatgtcattttagttgataaaatatttcaccgttacccgtgatgtc 31169452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 115 - 237
Target Start/End: Complemental strand, 36360210 - 36360088
Alignment:
Q  115 attttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtc 214  Q
    ||||| ||| ||||||||||||| || | |||| ||||| |||||||||||||||||||||| || ||| ||||| ||||||| |||| |||||| ||||    
T  36360210 attttggtcattttagtttgacagaatttccaagttagtcttttaagtttcgaaagtttcaaataagtctttttaatttgacaaaattgccaagttagtc 36360111  T
Q  215 atttaagtttcaaatgtttcaaa 237  Q
     ||||||||||||| ||||||||    
T  36360110 ctttaagtttcaaaagtttcaaa 36360088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 122 - 229
Target Start/End: Original strand, 9770565 - 9770672
Alignment:
Q  122 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 221  Q
    ||||| ||| |||||| || |||||| ||| |  |||||||||||||||||||||||| ||| ||||||||||| ||||||| ||||| |||||||||||    
T  9770565 tccttgtagattgacagaattcccaagttaatcatttaagtttcgaaagtttcaattaagtccttttagtttgagagaattctcaagttagtcatttaag 9770664  T
Q  222 tttcaaat 229  Q
    ||||||||    
T  9770665 tttcaaat 9770672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 180 - 273
Target Start/End: Complemental strand, 13771937 - 13771843
Alignment:
Q  180 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacc 273  Q
    |||||||||||||||||| ||||||||||| |||| ||||||||||||| |||||||||| ||| ||||| ||||||||| ||||||| ||||||    
T  13771937 ggtcattttagtttgacataattcccaagttagtcctttaagtttcaaaagtttcaaatatgtcattttatttgataaaccatttcactgttacc 13771843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 124 - 277
Target Start/End: Complemental strand, 23553994 - 23553840
Alignment:
Q  124 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtt 223  Q
    |||||||||||||| || ||  || ||||| |||||||||||||| |||| ||||| ||||||||||||||| ||||||| ||||| |||   | |||||    
T  23553994 cttttagtttgacagaattctaaagttagtcttttaagtttcgaatgttttaattaagtcattttagtttgatagaattctcaagttagttcctcaagtt 23553895  T
Q  224 tcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctg 277  Q
    ||||| ||||||||||| || | ||| || ||||| |||||||| ||||||||||    
T  23553894 tcaaaagtttcaaatagatcatgttagttaataaattatttcactgttacccctg 23553840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 273
Target Start/End: Complemental strand, 8714482 - 8714330
Alignment:
Q  122 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 221  Q
    |||||||||||||| | || | |||| |||||  |||||| ||| |||||||||| ||| |  ||||||||||| ||||||| ||||| |||  ||||||    
T  8714482 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaag 8714383  T
Q  222 tttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacc 273  Q
    |||| || |||| ||||||||| ||||| ||||||||||||||||| ||||||    
T  8714382 tttctaaagttttaaataggtctttttagttgataaactatttcactgttacc 8714330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 116 - 236
Target Start/End: Complemental strand, 40553433 - 40553313
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||| |||||||||||||||||||| ||| || |||||  ||| |||||  ||||||||||| ||||| ||||||||||||| |||| | |||| ||||     
T  40553433 ttttggtccttttagtttgacataattcctaacttagtcctttgagtttaaaaagtttcaatcaggtccttttagtttgacaaaatttctaagttagtct 40553334  T
Q  216 tttaagtttcaaatgtttcaa 236  Q
    ||||||||||||| |||||||    
T  40553333 tttaagtttcaaaagtttcaa 40553313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 41190397 - 41190293
Alignment:
Q  124 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtt 223  Q
    |||||||||||||| || || ||| |||||  ||||| |||||||| ||||||||||||||||||||||||| ||||||| |||   |||||||||||||    
T  41190397 cttttagtttgacagaattctcaaattagttctttaaatttcgaaaatttcaattaggtcattttagtttgatagaattctcaatctagtcatttaagtt 41190298  T
Q  224 tcaaa 228  Q
    |||||    
T  41190297 tcaaa 41190293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 156 - 277
Target Start/End: Original strand, 4613778 - 4613900
Alignment:
Q  156 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaatag-gtcttttaattgat 254  Q
    ||||| ||| |||||||||||||| ||| ||||||||||||| ||||  | ||| |||| ||||||||||||| |||||||||||  ||||||| || ||    
T  4613778 tttaaattttgaaagtttcaattaagtccttttagtttgacaaaattttcgagttagtcctttaagtttcaaaagtttcaaatagattcttttagtttat 4613877  T
Q  255 aaactatttcaccgttacccctg 277  Q
    |||||||||||||| || |||||    
T  4613878 aaactatttcaccgctaaccctg 4613900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 116 - 229
Target Start/End: Complemental strand, 14871482 - 14871368
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttag-tttgacagaattcccaagtcagtc 214  Q
    |||| ||||||| ||||||||| || ||| || ||||| ||||||||||||||||||||||||||||  |||||| ||||||| ||||| ||| | ||||    
T  14871482 ttttggtcctttaagtttgacagaattcctaagttagtcttttaagtttcgaaagtttcaattaggttcttttagttttgacataattctcaaattagtc 14871383  T
Q  215 atttaagtttcaaat 229  Q
     ||||||||||||||    
T  14871382 ctttaagtttcaaat 14871368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 156 - 277
Target Start/End: Original strand, 40552800 - 40552922
Alignment:
Q  156 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaatagg-tcttttaattgat 254  Q
    ||||| ||| |||||||||||||| |  |||||||||||||| ||||  ||||| || ||||||| |||||||  ||||||||||| ||||| |||||||    
T  40552800 tttaaattttgaaagtttcaattaagatattttagtttgacaaaattttcaagttagccatttaaatttcaaaaatttcaaataggttctttaaattgat 40552899  T
Q  255 aaactatttcaccgttacccctg 277  Q
    ||| |||||||| ||||||||||    
T  40552900 aaaatatttcactgttacccctg 40552922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 13771425 - 13771518
Alignment:
Q  185 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaatag-gtcttttaattgataaactatttcaccgttacccctg 277  Q
    ||||||||||||||||||  ||||| |||||||||||||| ||| |||||||||||  ||||||| |||||||||||||||||| || ||||||    
T  13771425 ttttagtttgacagaattttcaagttagtcatttaagttttaaaagtttcaaatagattcttttagttgataaactatttcaccatttcccctg 13771518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 116 - 209
Target Start/End: Complemental strand, 29792652 - 29792559
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagt 209  Q
    |||||||||||||||||||||| || |||||| |||||  ||||| ||||||||||||| ||||| || ||||||||||||| ||||| |||||    
T  29792652 ttttagtccttttagtttgacagaattcccaaattagtcctttaaatttcgaaagtttctattagatccttttagtttgacataattctcaagt 29792559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 185 - 288
Target Start/End: Original strand, 5358650 - 5358754
Alignment:
Q  185 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctgatgtcc 283  Q
    ||||||||||||||||||  ||||| |||| || |||||||||| |||| |||||||| |||||| ||||||||||||||| | |||||||||| ||||     
T  5358650 ttttagtttgacagaattttcaagttagtccttcaagtttcaaaagttttaaataggtccttttagttgataaactatttcgctgttacccctgctgtca 5358749  T
Q  284 atctc 288  Q
    |||||    
T  5358750 atctc 5358754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 121 - 229
Target Start/End: Complemental strand, 6236358 - 6236250
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 220  Q
    ||||||||||||| ||| || |||||| ||| |  |||||||||| | ||||||||||||||| ||||| ||||||||| ||||||||| |||  |||||    
T  6236358 gtccttttagttttacaaaattcccaagttatttctttaagtttcaatagtttcaattaggtccttttaatttgacagacttcccaagttagtactttaa 6236259  T
Q  221 gtttcaaat 229  Q
    |||||||||    
T  6236258 gtttcaaat 6236250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 149 - 236
Target Start/End: Original strand, 39700856 - 39700943
Alignment:
Q  149 ttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaa 236  Q
    ||||| |||||||||| |||||||||||||||||| ||||||||||||| |||||  |||| |||| ||||||||| ||| |||||||    
T  39700856 ttagtcttttaagttttgaaagtttcaattaggtccttttagtttgacaaaattcttaagttagtcctttaagttttaaaagtttcaa 39700943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 228
Target Start/End: Original strand, 43422921 - 43423028
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 220  Q
    ||||||||| |||  || || |||||| |||||  |||||||||| |||||||||| |||||||||||||||||||| |||| |||||| |||| |||||    
T  43422921 gtccttttattttagcaaaattcccaagttagtcctttaagtttcaaaagtttcaaataggtcattttagtttgacaaaatttccaagttagtcctttaa 43423020  T
Q  221 gtttcaaa 228  Q
     |||||||    
T  43423021 atttcaaa 43423028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 116 - 237
Target Start/End: Complemental strand, 45018053 - 45017934
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||||||||||||||||||||| ||    ||| |||||  |||||||||||||||||| ||||||||| ||||||||||||  || | |||||| ||||     
T  45018053 ttttagtccttttagtttgacaaaatcttcaagttagtcctttaagtttcgaaagttttaattaggtccttttagtttgac--aagttccaagttagtcc 45017956  T
Q  216 tttaagtttcaaatgtttcaaa 237  Q
    |||||||||||||  |||||||    
T  45017955 tttaagtttcaaaaatttcaaa 45017934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 200
Target Start/End: Complemental strand, 36314781 - 36314697
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaa 200  Q
    |||| ||||||||||||||||| || |  ||| ||||| |||||| |||||||||||||||||| ||| ||||||||||||||||    
T  36314781 ttttggtccttttagtttgacaaaattatcaagttagtcttttaaatttcgaaagtttcaattatgtccttttagtttgacagaa 36314697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 274
Target Start/End: Original strand, 35433899 - 35433994
Alignment:
Q  180 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttaccc 274  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||| |||| |||||| || ||||| |||||||| |||||||| |||||||    
T  35433899 ggtccttttaatttgatagaattcacaagttagtcatttaagtttcaaaagttttaaatagatctttttagttgataaattatttcactgttaccc 35433994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 266
Target Start/End: Complemental strand, 35434400 - 35434313
Alignment:
Q  180 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcac 266  Q
    |||| ||||||||||||| |||||| |||| | || ||||||||||||| |||||||||| ||| ||||| |||||||||||||||||    
T  35434400 ggtccttttagtttgacataattcctaagttaatcctttaagtttcaaaagtttcaaatatgtcattttagttgataaactatttcac 35434313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 247
Target Start/End: Complemental strand, 36360205 - 36360138
Alignment:
Q  180 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtctttt 247  Q
    ||||||||||||||||||||||| |||||| |||| |||||||||| || |||||||||| |||||||    
T  36360205 ggtcattttagtttgacagaatttccaagttagtcttttaagtttcgaaagtttcaaataagtctttt 36360138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 237
Target Start/End: Original strand, 9770662 - 9770731
Alignment:
Q  168 aagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaa 237  Q
    ||||||||| |||||| |||||||||||||||||||| |||| |||| |||||||||||||  |||||||    
T  9770662 aagtttcaaataggtccttttagtttgacagaattccgaagttagtcctttaagtttcaaaaatttcaaa 9770731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 125 - 265
Target Start/End: Complemental strand, 16208815 - 16208674
Alignment:
Q  125 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 224  Q
    ||||||||||||| || || ||| |||||  |||||||||   |  |||||| ||| |||||||||||| | ||||||  ||||| |||| ||| |||||    
T  16208815 ttttagtttgacagaattctcaagttagttctttaagttttatagatttcaaatagatcattttagttttatagaattttcaagttagtcctttgagttt 16208716  T
Q  225 caaatgtttcaaataggt-cttttaattgataaactatttca 265  Q
    |||| |||||||||| || |||||| ||||||||||||||||    
T  16208715 caaaagtttcaaatatgtccttttagttgataaactatttca 16208674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 180 - 272
Target Start/End: Complemental strand, 34686968 - 34686875
Alignment:
Q  180 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttac 272  Q
    |||| ||||| ||||||||||||  ||||| |||| ||||| ||| ||| |||| ||||||||| ||||| |||||||||||||||||||||||    
T  34686968 ggtccttttaatttgacagaattatcaagttagtcctttaaattttaaaagttttaaataggtccttttagttgataaactatttcaccgttac 34686875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 156 - 209
Target Start/End: Complemental strand, 43423127 - 43423074
Alignment:
Q  156 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagt 209  Q
    |||||||||| |||||||||| |||||||||||||||||||| |||||||||||    
T  43423127 tttaagtttcaaaagtttcaaataggtcattttagtttgacaaaattcccaagt 43423074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 282
Target Start/End: Original strand, 6235793 - 6235895
Alignment:
Q  182 tcattttagtttgacagaattcc-caagtcagtcatttaagtttcaaatgtttcaaatag-gtcttttaattgataaactatttcaccgttacccctgat 279  Q
    |||||||||||||||||||||||  |||| | || ||||| ||||||| |||||||||||  | ||||| |||||||||||||||||| ||||| ||| |    
T  6235793 tcattttagtttgacagaattccgaaagttaatcctttaaatttcaaaagtttcaaatagactattttagttgataaactatttcacctttacctctgct 6235892  T
Q  280 gtc 282  Q
    |||    
T  6235893 gtc 6235895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 9277112 - 9277058
Alignment:
Q  182 tcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaa 236  Q
    |||||||||||||||||||||||||||| |||| |||||||||| || |||||||    
T  9277112 tcattttagtttgacagaattcccaagttagtcttttaagtttcgaaagtttcaa 9277058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 189
Target Start/End: Complemental strand, 13771941 - 13771868
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcatttta 189  Q
    |||| ||| |||||||||||||||| |||||| |||||  |||||||||| |||||||||| || |||||||||    
T  13771941 ttttggtcattttagtttgacataattcccaagttagtcctttaagtttcaaaagtttcaaatatgtcatttta 13771868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 35434404 - 35434328
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 192  Q
    |||| |||||||||||||||||||| ||| || ||| |  |||||||||| |||||||||| || ||||||||||||    
T  35434404 ttttggtccttttagtttgacataattcctaagttaatcctttaagtttcaaaagtttcaaatatgtcattttagtt 35434328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 227
Target Start/End: Original strand, 23179049 - 23179096
Alignment:
Q  180 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaa 227  Q
    |||| ||||||||||||||||||||||||| |||| ||||||||||||    
T  23179049 ggtccttttagtttgacagaattcccaagttagtcctttaagtttcaa 23179096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 192
Target Start/End: Original strand, 23553418 - 23553489
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 192  Q
    ||||||||||||||||| || || ||| || || |||||| |||| |||||||||| |||||||||||||||    
T  23553418 gtccttttagtttgacaaaattctcaagttggtcttttaaatttcaaaagtttcaaataggtcattttagtt 23553489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 192
Target Start/End: Complemental strand, 30576729 - 30576658
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 192  Q
    ||||||||||||||||| || |||||| |||||  |||||||||| ||||||| || || ||||||||||||    
T  30576729 gtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagttttaaatatgtcattttagtt 30576658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 247
Target Start/End: Original strand, 36359903 - 36359970
Alignment:
Q  180 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtctttt 247  Q
    |||| |||||||||||||||||| |||||| |||| |||||||||| || ||||||| ||||| ||||    
T  36359903 ggtccttttagtttgacagaatttccaagttagtcctttaagtttcgaaagtttcaattaggtatttt 36359970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 277
Target Start/End: Original strand, 44040860 - 44040922
Alignment:
Q  216 tttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctg 277  Q
    ||||||||||||| |||| ||||||||| ||||| ||||||||||||||||| |||| |||||    
T  44040860 tttaagtttcaaaagttttaaataggtcattttagttgataaactatttcactgttatccctg 44040922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 29030252 - 29030175
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagttt 193  Q
    |||| ||| |||||||||||||||| |||  | ||| |  |||||||||||||||||||||||| ||| |||||||||    
T  29030252 ttttggtcattttagtttgacataattccttagttattcctttaagtttcgaaagtttcaattaagtccttttagttt 29030175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 192
Target Start/End: Original strand, 44040808 - 44040896
Alignment:
Q  103 aggtcaaaaatcattttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 192  Q
    |||||||| |||||||| ||||||||||||| ||| || |  ||| ||||  ||||||||||| ||||||| || |||||||||||||||    
T  44040808 aggtcaaatatcattttggtccttttagtttaacagaatttacaaattagc-ttttaagtttcaaaagttttaaataggtcattttagtt 44040896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 25737106 - 25737166
Alignment:
Q  180 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaatag 240  Q
    |||| ||||||||||||| ||||  ||||| |||| ||||||||||||| |||||||||||    
T  25737106 ggtccttttagtttgacataattttcaagttagtcctttaagtttcaaaagtttcaaatag 25737166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 31169614 - 31169555
Alignment:
Q  180 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaatag 240  Q
    |||||||||||||||||| ||||| ||||| |||| ||||||||| ||| |||||||||||    
T  31169614 ggtcattttagtttgacaaaattctcaagttagtcctttaagttttaaa-gtttcaaatag 31169555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 39701523 - 39701467
Alignment:
Q  180 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaa 236  Q
    |||| ||||||||||||||||||| ||||| |||  ||||||||||||| |||||||    
T  39701523 ggtccttttagtttgacagaattctcaagttagttctttaagtttcaaaagtttcaa 39701467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 248
Target Start/End: Complemental strand, 43423222 - 43423154
Alignment:
Q  180 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtctttta 248  Q
    |||| ||||||||||||| |||||| |||| ||| ||||||||||| || ||||||| || ||||||||    
T  43423222 ggtccttttagtttgacataattcctaagttagttatttaagtttcgaaagtttcaattaagtctttta 43423154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 242
Target Start/End: Complemental strand, 14871478 - 14871416
Alignment:
Q  180 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt 242  Q
    |||| ||| |||||||||||||||| |||| |||| |||||||||| || ||||||| |||||    
T  14871478 ggtcctttaagtttgacagaattcctaagttagtcttttaagtttcgaaagtttcaattaggt 14871416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 9770575 - 9770619
Alignment:
Q  192 ttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaa 236  Q
    |||||||||||||||||| | ||||||||||||| || |||||||    
T  9770575 ttgacagaattcccaagttaatcatttaagtttcgaaagtttcaa 9770619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 192
Target Start/End: Complemental strand, 39701463 - 39701391
Alignment:
Q  120 agtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 192  Q
    |||||||||||||||| | || |||||  |||||  |||||||||| ||| |||||| |||||| ||||||||    
T  39701463 agtccttttagtttgatagaattcccagattagtcatttaagtttcaaaactttcaaataggtccttttagtt 39701391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 3e-45; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 116 - 282
Target Start/End: Complemental strand, 36196627 - 36196462
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||| |||||||||||||||||  | |  ||| |||||  |||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||    
T  36196627 ttttggtccttttagtttgaca--attttcaaattagtcctttaagtttcgaaagtttcaattaggtctttttagtttgacagaatttccaagttagtca 36196530  T
Q  216 tttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 282  Q
    ||| ||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||| ||||    
T  36196529 tttgagtttcaaaagtttcaaataggtcattttagttgataaactatttcaccgttacccctgctgtc 36196462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 116 - 282
Target Start/End: Complemental strand, 27893686 - 27893519
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||| ||||||||||||||||| || || ||| |||||  ||||||||||| |||||||||||||||  ||||||||||||||||||||||||| ||||     
T  27893686 ttttggtccttttagtttgacaaaattctcaagttagtcctttaagtttcgtaagtttcaattaggttcttttagtttgacagaattcccaagttagtcc 27893587  T
Q  216 tttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 282  Q
    ||||||||||||| ||||||||||| || ||||| |||||||||||||||| ||||| ||||| ||||    
T  27893586 tttaagtttcaaaagtttcaaatagatcattttagttgataaactatttcatcgttaaccctgttgtc 27893519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 102 - 274
Target Start/End: Complemental strand, 31264301 - 31264125
Alignment:
Q  102 taggtcaaaaatcattttag-tccttttagtttgacataactcccaattta--gtattttaagtttcgaaagtttcaattaggtcattttagtttgacag 198  Q
    ||||||||| |||| ||| | |||||||||||||||| || | |||| |||  ||| |||||||||||||||||||||||| ||| ||||||||||||||    
T  31264301 taggtcaaatatcacttttgatccttttagtttgacagaatttccaagttatagtactttaagtttcgaaagtttcaattaagtccttttagtttgacag 31264202  T
Q  199 aattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttaccc 274  Q
    |||| |||||| ||| |||||||||||||| ||||||||||||| |||||| |||||||||||||||||||| ||||    
T  31264201 aatttccaagttagttatttaagtttcaaaagtttcaaataggtccttttagttgataaactatttcaccgtcaccc 31264125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 156 - 272
Target Start/End: Original strand, 19080667 - 19080784
Alignment:
Q  156 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgat 254  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||  ||||| || ||||||||||||||| |||||| |||||| |||||| |||||    
T  19080667 tttaagttttgaaagtttcaattaggtcattttagtttgacagaattttcaagttagacatttaagtttcaaaagtttcatataggtccttttagttgat 19080766  T
Q  255 aaactatttcaccgttac 272  Q
    ||||||||||||||||||    
T  19080767 aaactatttcaccgttac 19080784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 122 - 267
Target Start/End: Original strand, 34336039 - 34336185
Alignment:
Q  122 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 221  Q
    |||||||||||||| | || |  ||| |||||  ||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||    
T  34336039 tccttttagtttgataaaattttcaaattagtcctttaagttttgaaagtttcaattatgtcattttagtttgacagaattcccaagttagtcctttaag 34336138  T
Q  222 tttcaaatgtttcaaataggtc-ttttaattgataaactatttcacc 267  Q
    ||||||| |||| ||||||||| ||||| || |||||||||||||||    
T  34336139 tttcaaaagttttaaataggtctttttagttaataaactatttcacc 34336185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 107 - 240
Target Start/End: Original strand, 30907063 - 30907196
Alignment:
Q  107 caaaaatcattttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattccca 206  Q
    |||| |||||||| |  |||||||||||||| || || ||| ||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||| ||    
T  30907063 caaatatcatttttggtcttttagtttgacagaattctcaagttagtcttttaagtttcgaaagtttcaattaggtccttttagtttgacataattctca 30907162  T
Q  207 agtcagtcatttaagtttcaaatgtttcaaatag 240  Q
    ||| |||| ||||||||||||| |||||||||||    
T  30907163 agttagtcctttaagtttcaaaagtttcaaatag 30907196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 116 - 242
Target Start/End: Original strand, 31263923 - 31264049
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||| ||| ||||||||||||| || | |||| ||| |  |||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||     
T  31263923 ttttggtctttttagtttgacagaatttccaagttaatcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaattctcaagttagtcc 31264022  T
Q  216 tttaagtttcaaatgtttcaaataggt 242  Q
    ||||||||||||| |||||||||||||    
T  31264023 tttaagtttcaaaagtttcaaataggt 31264049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 121 - 237
Target Start/End: Original strand, 30907137 - 30907253
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 220  Q
    |||||||||||||||||||| || ||| |||||  |||||||||| |||||||||| ||| || |||||| |||||| ||||||||||| ||||||||||    
T  30907137 gtccttttagtttgacataattctcaagttagtcctttaagtttcaaaagtttcaaatagatccttttagattgacataattcccaagttagtcatttaa 30907236  T
Q  221 gtttcaaatgtttcaaa 237  Q
    |||||||| ||||||||    
T  30907237 gtttcaaaagtttcaaa 30907253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 116 - 269
Target Start/End: Complemental strand, 30907440 - 30907288
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcatttta-gtttgacagaattcccaagtcagtc 214  Q
    ||||| |||||||||||||||| || |   || |||||  |||||||||||||||||||||||||||| ||||| |||||| ||||||| ||||| ||||    
T  30907440 ttttaatccttttagtttgacaaaatttataagttagtcatttaagtttcgaaagtttcaattaggtccttttaagtttgaaagaattctcaagttagtc 30907341  T
Q  215 atttaagtttcaaatgtttcaaataggtcttttaattgataaactatttcaccgt 269  Q
     ||||||||||||| |||||||||| ||| ||||  ||||||| |||||| ||||    
T  30907340 ctttaagtttcaaaagtttcaaataagtcattta--tgataaattatttcgccgt 30907288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 37542956 - 37543057
Alignment:
Q  126 tttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttc 225  Q
    |||||||||||| |||| | || ||||| ||||||||||||||||||| ||||| ||||||||||||||||| |||| |||||| |||| ||||||||||    
T  37542956 tttagtttgacagaacttc-aagttagtcttttaagtttcgaaagttttaattaagtcattttagtttgacataatttccaagttagtcctttaagtttc 37543054  T
Q  226 aaa 228  Q
    |||    
T  37543055 aaa 37543057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 247
Target Start/End: Complemental strand, 39376491 - 39376401
Alignment:
Q  157 ttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtctttt 247  Q
    |||||||||||||||||  |||||||| |||||  ||||||||||| |||||| |||| ||||||||||||| ||||||||||||||||||    
T  39376491 ttaagtttcgaaagttttgattaggtctttttaaattgacagaatttccaagttagtcctttaagtttcaaacgtttcaaataggtctttt 39376401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 157 - 277
Target Start/End: Complemental strand, 11871835 - 11871714
Alignment:
Q  157 ttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgata 255  Q
    |||||||| |||| ||||||||| ||| | ||||||||||||||||| | ||| |||| ||||||||||||| |||| ||||| ||| ||||| ||||||    
T  11871835 ttaagttttgaaactttcaattatgtcctcttagtttgacagaattctcgagttagtcctttaagtttcaaaagttttaaatatgtcattttagttgata 11871736  T
Q  256 aactatttcaccgttacccctg 277  Q
    || ||||| |||||||||||||    
T  11871735 aattatttaaccgttacccctg 11871714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 229
Target Start/End: Original strand, 27893038 - 27893146
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 220  Q
    ||||||||||||||||| || || ||| ||| |  ||||| ||||||||||||||||||  || |||||||||||||| |||||||||| |||| |||||    
T  27893038 gtccttttagtttgacagaattctcaagttaatcctttaaatttcgaaagtttcaattatatctttttagtttgacagtattcccaagttagtcctttaa 27893137  T
Q  221 gtttcaaat 229  Q
    |||||||||    
T  27893138 gtttcaaat 27893146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 8260392 - 8260507
Alignment:
Q  125 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 224  Q
    ||||||||| ||| || || ||| |||||  ||||||||||||||||||||||||| |||||||||||||||||| ||| ||| | | || ||||| |||    
T  8260392 ttttagttttacagaattctcaaattagtcctttaagtttcgaaagtttcaattagatcattttagtttgacagagttctcaaattactcttttaatttt 8260491  T
Q  225 caaatgtttcaaatag 240  Q
    |||| |||||||||||    
T  8260492 caaaagtttcaaatag 8260507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 185 - 282
Target Start/End: Original strand, 20535509 - 20535608
Alignment:
Q  185 ttttagtttgacagaattcccaagtcagtcatttaa-gtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 282  Q
    ||||||||| ||| ||||  ||||| |||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||| ||||    
T  20535509 ttttagtttaacataattatcaagttagtcatttaaagtttcaaatgtttcaaataggtcattttagttgataaactatttcaccgttatccctgctgtc 20535608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 97 - 239
Target Start/End: Complemental strand, 34336419 - 34336276
Alignment:
Q  97 tattttaggtcaaaaatca-ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttga 195  Q
    |||||||||||||| |||| |||| ||||||||||||||||| || || ||| |||||  ||||| |||||||||||||| ||| ||| ||||| |||||    
T  34336419 tattttaggtcaaatatcacttttggtccttttagtttgacagaattctcaaattagtcctttaaatttcgaaagtttcagttaagtccttttaatttga 34336320  T
Q  196 cagaattcccaagtcagtcatttaagtttcaaatgtttcaaata 239  Q
    || ||||| ||| | |||  ||||| ||||||| ||||||||||    
T  34336319 caaaattctcaaattagttctttaaatttcaaaagtttcaaata 34336276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 116 - 241
Target Start/End: Complemental strand, 16781175 - 16781049
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagta-ttttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtc 214  Q
    |||| ||| ||||||||||||| || || ||| |||||  |||||||||| |||||||| ||||||||| ||||||||||||| ||||| ||||| ||||    
T  16781175 ttttggtcattttagtttgacagaattctcaagttagtccttttaagttttgaaagttttaattaggtccttttagtttgacaaaattcacaagttagtc 16781076  T
Q  215 atttaagtttcaaatgtttcaaatagg 241  Q
     ||||| ||||||| ||||||| ||||    
T  16781075 ctttaaatttcaaaagtttcaattagg 16781049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 172 - 276
Target Start/End: Original strand, 15506040 - 15506145
Alignment:
Q  172 ttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgtt 270  Q
    |||||||||||| ||||||||||||| ||||| ||| | | || ||||||||| ||| |||| ||| ||||| |||||||||||||||||||||||||||    
T  15506040 ttcaattaggtccttttagtttgacataattctcaaattaatcctttaagtttaaaaagttttaaagaggtcattttaattgataaactatttcaccgtt 15506139  T
Q  271 acccct 276  Q
    | ||||    
T  15506140 aaccct 15506145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 228
Target Start/End: Original strand, 31263988 - 31264095
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 220  Q
    ||||||||||||||||| || || ||| |||||  |||||||||| |||||||||| |||||  ||||  ||||||||||||||||||| |||  |||||    
T  31263988 gtccttttagtttgacagaattctcaagttagtcctttaagtttcaaaagtttcaaataggttctttttctttgacagaattcccaagttagtactttaa 31264087  T
Q  221 gtttcaaa 228  Q
    ||||||||    
T  31264088 gtttcaaa 31264095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 228
Target Start/End: Original strand, 34429684 - 34429791
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 220  Q
    ||||||||||||||||| || || ||| |||||  ||||| |||||||| ||||||||||||| ||||| ||||| |||||| |||||| | || |||||    
T  34429684 gtccttttagtttgacagaattctcaagttagtcctttaaatttcgaaaatttcaattaggtccttttaatttgaaagaatttccaagttaatcctttaa 34429783  T
Q  221 gtttcaaa 228  Q
    ||||||||    
T  34429784 gtttcaaa 34429791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 229
Target Start/End: Complemental strand, 41265364 - 41265257
Alignment:
Q  122 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 221  Q
    |||||||||||||| | || |  ||| |||||  |||||||||||||||||||||||| ||| | ||| ||||||||||||| ||||| |||| ||||||    
T  41265364 tccttttagtttgagagaattatcaagttagtcatttaagtttcgaaagtttcaattatgtcctcttaatttgacagaattctcaagttagtcctttaag 41265265  T
Q  222 tttcaaat 229  Q
    ||||||||    
T  41265264 tttcaaat 41265257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 275
Target Start/End: Complemental strand, 42117268 - 42117172
Alignment:
Q  180 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccc 275  Q
    |||| |||||||||| ||||| | | |||| |||| ||||||||||||| |||| |||||||| |||||| ||||||||| ||||||||||||||||    
T  42117268 ggtccttttagtttgtcagaaattctaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 42117172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 125 - 194
Target Start/End: Complemental strand, 19081124 - 19081055
Alignment:
Q  125 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttg 194  Q
    ||||||||||||| || || ||| ||||| ||||||||||||||||||||||||||||  ||||||||||    
T  19081124 ttttagtttgacagaattctcaaattagtcttttaagtttcgaaagtttcaattaggtgtttttagtttg 19081055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 156 - 229
Target Start/End: Complemental strand, 20536039 - 20535966
Alignment:
Q  156 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaat 229  Q
    |||||||| ||||||||| |||||  |||||||||||||||| ||||| ||||| |||| ||||||||||||||    
T  20536039 tttaagttacgaaagttttaattatatcattttagtttgacataattctcaagttagtcttttaagtttcaaat 20535966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 124 - 221
Target Start/End: Complemental strand, 37543197 - 37543100
Alignment:
Q  124 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 221  Q
    |||||||||||||| || |  ||| ||||| |||||||||| |||||||||||||| ||| ||||||||||||| |||| |||||  |||| ||||||    
T  37543197 cttttagtttgacagaattttcaagttagtcttttaagttttgaaagtttcaattaagtccttttagtttgacataatttccaaggtagtcctttaag 37543100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 228
Target Start/End: Complemental strand, 34336335 - 34336227
Alignment:
Q  120 agtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcattta 219  Q
    |||||||||| ||||||| || || ||| |||||  ||||| |||| |||||||||| || ||| || |||||||||||||||  ||||| | || ||||    
T  34336335 agtccttttaatttgacaaaattctcaaattagttctttaaatttcaaaagtttcaaataagtccttgtagtttgacagaattttcaagttaatctttta 34336236  T
Q  220 agtttcaaa 228  Q
    |||||||||    
T  34336235 agtttcaaa 34336227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 243
Target Start/End: Original strand, 30907081 - 30907139
Alignment:
Q  185 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc 243  Q
    ||||||||||||||||||| ||||| |||| |||||||||| || ||||||| ||||||    
T  30907081 ttttagtttgacagaattctcaagttagtcttttaagtttcgaaagtttcaattaggtc 30907139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 37543048 - 37543089
Alignment:
Q  168 aagtttcaattaggtcattttagtttgacagaattcccaagt 209  Q
    |||||||||  |||||||||||||||||||||||||||||||    
T  37543048 aagtttcaaacaggtcattttagtttgacagaattcccaagt 37543089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 243
Target Start/End: Original strand, 31263927 - 31263990
Alignment:
Q  180 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc 243  Q
    |||| |||||||||||||||||| |||||| | || |||||||||| || ||||||| ||||||    
T  31263927 ggtctttttagtttgacagaatttccaagttaatcctttaagtttcgaaagtttcaattaggtc 31263990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 247
Target Start/End: Complemental strand, 19081124 - 19081062
Alignment:
Q  185 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtctttt 247  Q
    ||||||||||||||||||| ||| | |||| |||||||||| || ||||||| ||||| ||||    
T  19081124 ttttagtttgacagaattctcaaattagtcttttaagtttcgaaagtttcaattaggtgtttt 19081062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 229
Target Start/End: Original strand, 5116895 - 5116956
Alignment:
Q  168 aagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaat 229  Q
    |||||||||||||||| ||||||||||||| ||||   || | |||| ||||||||||||||    
T  5116895 aagtttcaattaggtccttttagtttgacaaaatttttaaattagtcctttaagtttcaaat 5116956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 282
Target Start/End: Original strand, 27893138 - 27893191
Alignment:
Q  230 gtttcaaataggtcttttaa-ttgataaactatttcaccgttacccctgatgtc 282  Q
    |||||||||||||||||| | |||||||||||||||| ||||||| ||| ||||    
T  27893138 gtttcaaataggtctttttagttgataaactatttcaacgttacctctgctgtc 27893191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 229
Target Start/End: Original strand, 39376172 - 39376284
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||| ||| ||||||||| |||||| || ||| || ||  || |||||| ||||||||||| ||| || ||||||||| || ||||||| |||| ||||     
T  39376172 tttttgtcattttagtttaacataattctcaagttggtccttcaagttttgaaagtttcaactagatccttttagttttacggaattcctaagttagtc- 39376270  T
Q  216 tttaagtttcaaat 229  Q
    ||||| ||||||||    
T  39376271 tttaaatttcaaat 39376284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 5116946 - 5117006
Alignment:
Q  168 aagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaa 228  Q
    ||||||||| || ||||||||||||||||| ||||| ||||| | || ||||| |||||||    
T  5116946 aagtttcaaataagtcattttagtttgacaaaattcacaagttactcctttaactttcaaa 5117006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 251
Target Start/End: Original strand, 34429683 - 34429755
Alignment:
Q  180 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaatt 251  Q
    |||| ||||||||||||||||||| ||||| |||| ||||| |||| ||  |||||| ||||| |||||||||    
T  34429683 ggtccttttagtttgacagaattctcaagttagtcctttaaatttcgaaaatttcaattaggtccttttaatt 34429755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 2e-42; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 121 - 282
Target Start/End: Complemental strand, 10862708 - 10862545
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca-ttta 219  Q
    ||||||||||||||||| || || ||| |||||  ||||||||| |||||||||||||| ||||||||||||||| ||||||||| ||| ||||| ||||    
T  10862708 gtccttttagtttgacagaattctcaagttagtcctttaagttttgaaagtttcaattaagtcattttagtttgaaagaattccccagttagtcatttta 10862609  T
Q  220 agtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctgatgtc 282  Q
    | ||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||| ||||    
T  10862608 aatttcaaaagtttcaaataggtccttttagttgataaactatttcaccgttacccctgctgtc 10862545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 125 - 269
Target Start/End: Complemental strand, 32417829 - 32417684
Alignment:
Q  125 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 224  Q
    ||||||||| ||| || |||||| |||||  ||||| |||||||||||||||||||||| ||| ||||||||| |||| | |||| ||||||||||||||    
T  32417829 ttttagttttacagaattcccaagttagttctttaactttcgaaagtttcaattaggtcctttcagtttgacaaaatttctaagttagtcatttaagttt 32417730  T
Q  225 caaatgtttcaaataggt-cttttaattgataaactatttcaccgt 269  Q
    || | ||||||||||||| |||||| ||||||||||||||||||||    
T  32417729 cagaagtttcaaataggtccttttagttgataaactatttcaccgt 32417684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 125 - 269
Target Start/End: Complemental strand, 32423670 - 32423525
Alignment:
Q  125 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 224  Q
    ||||||||| ||| || |||||| |||||  ||||| |||||||||||||||||||||| ||| ||||||||| |||| | |||| ||||||||||||||    
T  32423670 ttttagttttacagaattcccaagttagttctttaactttcgaaagtttcaattaggtcctttcagtttgacaaaatttctaagttagtcatttaagttt 32423571  T
Q  225 caaatgtttcaaataggt-cttttaattgataaactatttcaccgt 269  Q
    || | ||||||||||||| |||||| ||||||||||||||||||||    
T  32423570 cagaagtttcaaataggtccttttagttgataaactatttcaccgt 32423525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 116 - 282
Target Start/End: Original strand, 11527535 - 11527693
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||| ||||||||| |||||||||| ||| || |||||  |||||||||||||||||||||||||||| ||||||||||||| ||||| ||||| ||||     
T  11527535 ttttggtccttttactttgacataattcctaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacaaaattcacaagttagtcc 11527634  T
Q  216 tttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 282  Q
    |||||         |||||||||||||| ||||| |||||||||||||||||||||||||||| ||||    
T  11527635 tttaa---------gtttcaaataggtcattttagttgataaactatttcaccgttacccctgctgtc 11527693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 125 - 247
Target Start/End: Complemental strand, 16168807 - 16168685
Alignment:
Q  125 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 224  Q
    ||||||||||||| || | |||| |||||  ||||||||||| |||||||||||||||| ||||||||||||||||||| ||||| ||||  ||| ||||    
T  16168807 ttttagtttgacagaatttccaaattagtcatttaagtttcgcaagtttcaattaggtccttttagtttgacagaattctcaagttagtctattacgttt 16168708  T
Q  225 caaatgtttcaaataggtctttt 247  Q
    |||| ||||||||||||||||||    
T  16168707 caaaagtttcaaataggtctttt 16168685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 156 - 277
Target Start/End: Complemental strand, 17180224 - 17180102
Alignment:
Q  156 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgat 254  Q
    |||||||||||||||||| ||||| ||| ||||||||||||| ||||  ||||| |||| ||||||||| ||| ||||||||||| || ||||| |||||    
T  17180224 tttaagtttcgaaagttttaattatgtccttttagtttgacataattttcaagttagtcctttaagttttaaaagtttcaaatagatcattttagttgat 17180125  T
Q  255 aaactatttcaccgttacccctg 277  Q
    |||||||||||||||||||||||    
T  17180124 aaactatttcaccgttacccctg 17180102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 121 - 263
Target Start/End: Original strand, 20575416 - 20575559
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 220  Q
    ||||||||||||||| | || | |||| |||||  |||||||||||||||||| || |||||| ||||||||||| |||||| |||||| |||| |||||    
T  20575416 gtccttttagtttgatagaatttccaagttagtcctttaagtttcgaaagttttaaataggtccttttagtttgatagaatttccaagttagtcctttaa 20575515  T
Q  221 gtttcaaatgtttcaaataggtc-ttttaattgataaactattt 263  Q
    |||| ||| |||||||||||||| ||| | ||||||||||||||    
T  20575516 gttttaaaagtttcaaataggtcatttcagttgataaactattt 20575559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 116 - 229
Target Start/End: Original strand, 16168464 - 16168577
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||| ||||||||||||||| | || || ||  |||||  ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||     
T  16168464 ttttggtccttttagtttgatagaattctcacgttagtcctttaagttttgaaagtttcaattaggtcattttagtttgacagaatttccaagttagtcc 16168563  T
Q  216 tttaagtttcaaat 229  Q
    ||||||||||||||    
T  16168564 tttaagtttcaaat 16168577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 116 - 239
Target Start/End: Original strand, 32417468 - 32417591
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||| ||||||||||||||||| || |  ||| |||||  |||||||||||||||||| ||||| ||||||||||||||||| ||||  ||||| |||||    
T  32417468 ttttggtccttttagtttgacagaattttcaagttagtcctttaagtttcgaaagttttaattatgtcattttagtttgacaaaattttcaagttagtca 32417567  T
Q  216 tttaagtttcaaatgtttcaaata 239  Q
    ||||||||||||| |||| |||||    
T  32417568 tttaagtttcaaaagttttaaata 32417591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 116 - 239
Target Start/End: Original strand, 32423309 - 32423432
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||| ||||||||||||||||| || |  ||| |||||  |||||||||||||||||| ||||| ||||||||||||||||| ||||  ||||| |||||    
T  32423309 ttttggtccttttagtttgacagaattttcaagttagtcctttaagtttcgaaagttttaattatgtcattttagtttgacaaaattttcaagttagtca 32423408  T
Q  216 tttaagtttcaaatgtttcaaata 239  Q
    ||||||||||||| |||| |||||    
T  32423409 tttaagtttcaaaagttttaaata 32423432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 282
Target Start/End: Complemental strand, 24139626 - 24139466
Alignment:
Q  122 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 221  Q
    ||||||||||| ||||||| || ||| |||||  |||||||||||||||||| ||||| ||| ||||||||||| ||||||  || || |||| ||||||    
T  24139626 tccttttagtt-gacataattcacaaattagtcctttaagtttcgaaagttttaattaagtccttttagtttgatagaattatcaggttagtcctttaag 24139528  T
Q  222 tttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 282  Q
    |||||||  ||||||||| ||| ||||| |||||||| |||||||| || ||||||| ||||    
T  24139527 tttcaaaaatttcaaataagtctttttagttgataaattatttcactgtaacccctgttgtc 24139466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 103 - 229
Target Start/End: Complemental strand, 9902404 - 9902277
Alignment:
Q  103 aggtcaaaaatcattttag-tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaat 201  Q
    |||||||| |||||||| | | |||||||||||||| || |  ||| ||||| ||||||||||||||||||| ||||| ||| ||||||||||||| |||    
T  9902404 aggtcaaatatcatttttggttcttttagtttgacagaattttcaagttagtcttttaagtttcgaaagttttaattatgtccttttagtttgacataat 9902305  T
Q  202 tcccaagtcagtcatttaagtttcaaat 229  Q
    |||| ||| |||  ||||||||||||||    
T  9902304 tcccgagttagttctttaagtttcaaat 9902277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 121 - 228
Target Start/End: Complemental strand, 16168751 - 16168644
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 220  Q
    ||||||||||||||||| || || ||| ||||| | ||| ||||| |||||||||| |||||| |||||||||||| ||| |||||||| |||| |||||    
T  16168751 gtccttttagtttgacagaattctcaagttagtctattacgtttcaaaagtttcaaataggtctttttagtttgactgaaatcccaagttagtcttttaa 16168652  T
Q  221 gtttcaaa 228  Q
    ||||||||    
T  16168651 gtttcaaa 16168644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 125 - 274
Target Start/End: Original strand, 10962746 - 10962896
Alignment:
Q  125 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 224  Q
    ||||||||||||| || ||| || ||| | | | |||||||||||||||||||||| || ||||| ||| | |||||| | || | |||| |||||||||    
T  10962746 ttttagtttgacaaaattccaaagttattctgtaaagtttcgaaagtttcaattagatccttttattttaatagaatttctaaattagtcctttaagttt 10962845  T
Q  225 caaatgtttcaaataggtc-ttttaattgataaactatttcaccgttaccc 274  Q
     ||| |||||||||| ||| ||||| |||||||||||||| ||||||||||    
T  10962846 taaaagtttcaaatatgtcattttagttgataaactattttaccgttaccc 10962896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 168 - 238
Target Start/End: Complemental strand, 20575670 - 20575600
Alignment:
Q  168 aagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaat 238  Q
    ||||||||| |||||| ||||||||||||||||||||||||| |||| ||||||||||||| |||||||||    
T  20575670 aagtttcaaataggtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagtttcaaat 20575600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 116 - 229
Target Start/End: Original strand, 2839624 - 2839737
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||| ||||||||| ||||| | || || ||| |||||  |||||||||| ||||||||||||||||| ||||| ||||||||||||| ||||| ||||     
T  2839624 ttttggtccttttaatttgaaagaattctcaagttagtcgtttaagtttcaaaagtttcaattaggtccttttaatttgacagaattctcaagttagtcc 2839723  T
Q  216 tttaagtttcaaat 229  Q
    ||||| ||||||||    
T  2839724 tttaaatttcaaat 2839737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 121 - 229
Target Start/End: Complemental strand, 2840172 - 2840064
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 220  Q
    ||||||||||||| |||||| || ||| |||||  |||||||||| |||||||| | ||| || ||||||||| ||||||||| ||||| | ||||||||    
T  2840172 gtccttttagtttaacataattctcaagttagtcatttaagtttcaaaagtttcgaatagatccttttagtttaacagaattctcaagttaatcatttaa 2840073  T
Q  221 gtttcaaat 229  Q
    |||||||||    
T  2840072 gtttcaaat 2840064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 155 - 282
Target Start/End: Original strand, 17179662 - 17179790
Alignment:
Q  155 ttttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattga 253  Q
    ||||||||||||||| ||| |||||||||  |||||||||| ||||||  ||||| |||| ||||| |||||||  |||||||||||| |||||| ||||    
T  17179662 ttttaagtttcgaaaattttaattaggtccctttagtttgatagaattttcaagttagtcctttaaatttcaaaaatttcaaataggtccttttagttga 17179761  T
Q  254 taaactatttcaccgttacccctgatgtc 282  Q
    |||   ||||||||||||| |||| ||||    
T  17179762 taagtcatttcaccgttactcctgctgtc 17179790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 282
Target Start/End: Complemental strand, 9946818 - 9946672
Alignment:
Q  128 tagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaa 227  Q
    ||||||||||||| | | || |||||  ||||| | |||||||||||||||||||||||||||||||||| |||| |||| | |||| |||||           
T  9946818 tagtttgacataatttctaagttagtcctttaaatctcgaaagtttcaattaggtcattttagtttgacataatttccaaattagtcctttaa------- 9946726  T
Q  228 atgtttcaaataggt-cttttaattgataaactatttcaccgttacccctgatgtc 282  Q
       ||||||| |||| |||||| |||||||||||||||||||||||||||| ||||    
T  9946725 --atttcaaagaggtccttttagttgataaactatttcaccgttacccctgctgtc 9946672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 282
Target Start/End: Complemental strand, 28630742 - 28630584
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||| |||||||||||||||||||| ||| || ||||| |||||||||| |||||||||||||||  |  |||||||||  |||||||| |||| |||      
T  28630742 ttttggtccttttagtttgacataattcctaagttagttttttaagttttgaaagtttcaattagacccatttagtttggtagaattcctaagttagtac 28630643  T
Q  216 tttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctgatgtc 282  Q
    |||||         | ||||||||||| |||||| |||||||||||||||||| ||||||||| ||||    
T  28630642 tttaa---------gcttcaaataggtccttttagttgataaactatttcacctttacccctgttgtc 28630584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 180 - 277
Target Start/End: Original strand, 9901962 - 9902060
Alignment:
Q  180 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctg 277  Q
    |||| |||||||||| ||||||| |||||| |||  ||| ||||||||| |||| ||||||||| ||||| |||||||||||||||| |||||||||||    
T  9901962 ggtccttttagtttgccagaatttccaagttagtgcttttagtttcaaaagttttaaataggtcattttagttgataaactatttcatcgttacccctg 9902060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 124 - 229
Target Start/End: Complemental strand, 20575763 - 20575660
Alignment:
Q  124 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtt 223  Q
    |||||||||||||| || || ||| ||||| ||||||||||||||||||| || || ||| ||||||||||||| ||||||||||| |||| || |||||    
T  20575763 cttttagtttgacagaattctcaagttagt-ttttaagtttcgaaagttttaaataagtccttttagtttgacaaaattcccaagttagtc-ttcaagtt 20575666  T
Q  224 tcaaat 229  Q
    ||||||    
T  20575665 tcaaat 20575660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 156 - 272
Target Start/End: Complemental strand, 11528130 - 11528013
Alignment:
Q  156 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgat 254  Q
    |||||||||  |||||||||| ||  |  ||||||||||||| || |||||| | | || ||||||||||||| |||||||||| ||| ||||| |||||    
T  11528130 tttaagtttaaaaagtttcaaatatattcttttagtttgacataagtcccaacttaatcctttaagtttcaaaagtttcaaatatgtcattttagttgat 11528031  T
Q  255 aaactatttcaccgttac 272  Q
    |||||||||||| |||||    
T  11528030 aaactatttcactgttac 11528013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 228
Target Start/End: Original strand, 32417537 - 32417640
Alignment:
Q  125 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 224  Q
    ||||||||||||| || |  ||| |||||  |||||||||| ||||||| || || ||| |||||||||||||||||| |||| | |||| |||||||||    
T  32417537 ttttagtttgacaaaattttcaagttagtcatttaagtttcaaaagttttaaatatgtccttttagtttgacagaatttccaaattagtcctttaagttt 32417636  T
Q  225 caaa 228  Q
    ||||    
T  32417637 caaa 32417640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 228
Target Start/End: Original strand, 32423378 - 32423481
Alignment:
Q  125 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 224  Q
    ||||||||||||| || |  ||| |||||  |||||||||| ||||||| || || ||| |||||||||||||||||| |||| | |||| |||||||||    
T  32423378 ttttagtttgacaaaattttcaagttagtcatttaagtttcaaaagttttaaatatgtccttttagtttgacagaatttccaaattagtcctttaagttt 32423477  T
Q  225 caaa 228  Q
    ||||    
T  32423478 caaa 32423481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 10407317 - 10407410
Alignment:
Q  185 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctg 277  Q
    ||||||||||||| |||||| | || | |  ||||||||||||| |||||||||| ||| ||||| |||||||| |||||||| ||||||||||    
T  10407317 ttttagtttgacaaaattcctatgttactgctttaagtttcaaaagtttcaaatatgtcattttagttgataaattatttcactgttacccctg 10407410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 11528102 - 11528034
Alignment:
Q  124 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 192  Q
    ||||||||||||||||| |||||| ||| |  |||||||||| |||||||||| || ||||||||||||    
T  11528102 cttttagtttgacataagtcccaacttaatcctttaagtttcaaaagtttcaaatatgtcattttagtt 11528034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 192
Target Start/End: Original strand, 9901939 - 9902034
Alignment:
Q  97 tattttaggtcaaaaatcattttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 192  Q
    ||||||||| |||| || ||||| |||||||||||||| || || | |||| |||||  ||| |||||| ||||||| || |||||||||||||||    
T  9901939 tattttaggccaaatataattttggtccttttagtttgccagaatttccaagttagtgcttttagtttcaaaagttttaaataggtcattttagtt 9902034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 273
Target Start/End: Complemental strand, 10407799 - 10407709
Alignment:
Q  185 ttttagtttgacagaattcccaagtcagtcatttaagtttc-aaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacc 273  Q
    ||||||||| || |||||| ||||| ||||||| ||||||  ||| |||||||||| ||| ||||| ||||||||||||||||| ||||||    
T  10407799 ttttagtttaacggaattctcaagttagtcattcaagtttttaaaagtttcaaatatgtcattttagttgataaactatttcactgttacc 10407709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 192
Target Start/End: Original strand, 10407307 - 10407384
Alignment:
Q  115 attttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 192  Q
    ||||||||||||||||||||||| || ||| |  ||| |  |||||||||| |||||||||| || ||||||||||||    
T  10407307 attttagtccttttagtttgacaaaattcctatgttactgctttaagtttcaaaagtttcaaatatgtcattttagtt 10407384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 251
Target Start/End: Original strand, 2839628 - 2839700
Alignment:
Q  180 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaatt 251  Q
    |||| ||||| ||||| ||||||| ||||| |||| ||||||||||||| ||||||| ||||| |||||||||    
T  2839628 ggtccttttaatttgaaagaattctcaagttagtcgtttaagtttcaaaagtttcaattaggtccttttaatt 2839700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 2840173 - 2840113
Alignment:
Q  180 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaatag 240  Q
    |||| ||||||||| ||| ||||| ||||| |||||||||||||||||| ||||| |||||    
T  2840173 ggtccttttagtttaacataattctcaagttagtcatttaagtttcaaaagtttcgaatag 2840113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 277
Target Start/End: Complemental strand, 17132265 - 17132178
Alignment:
Q  191 tttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctg 277  Q
    ||||||||||||| ||||| | || ||||||||||||| | |||||||| ||| | ||| || ||||||||||| |||||||| ||||    
T  17132265 tttgacagaattctcaagttaatcctttaagtttcaaaagattcaaataagtcatattagtttataaactattttaccgttactcctg 17132178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 192
Target Start/End: Complemental strand, 17180199 - 17180128
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 192  Q
    |||||||||||||||||||| |  ||| |||||  |||||||||  |||||||||| ||| |||||||||||    
T  17180199 gtccttttagtttgacataattttcaagttagtcctttaagttttaaaagtttcaaatagatcattttagtt 17180128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 243
Target Start/End: Original strand, 20575415 - 20575478
Alignment:
Q  180 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc 243  Q
    |||| ||||||||||| |||||| |||||| |||| |||||||||| || |||| |||||||||    
T  20575415 ggtccttttagtttgatagaatttccaagttagtcctttaagtttcgaaagttttaaataggtc 20575478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 176
Target Start/End: Complemental strand, 20575657 - 20575602
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaa 176  Q
    ||||||||||||||||| || |||||| |||||  |||||||||| ||||||||||    
T  20575657 gtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagtttcaa 20575602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 10862709 - 10862665
Alignment:
Q  180 ggtcattttagtttgacagaattcccaagtcagtcatttaagttt 224  Q
    |||| ||||||||||||||||||| ||||| |||| |||||||||    
T  10862709 ggtccttttagtttgacagaattctcaagttagtcctttaagttt 10862665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 2e-42; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 116 - 274
Target Start/End: Complemental strand, 48352867 - 48352708
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||| ||||||||||||||||| || |||| | ||||| |||||||||||||||| ||||||||||||  |||||||||||| ||||||||||| ||||     
T  48352867 ttttggtccttttagtttgacagaattcccgagttagtcttttaagtttcgaaagattcaattaggtctatttagtttgacataattcccaagttagtcc 48352768  T
Q  216 tttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttaccc 274  Q
    ||||||||||||| |||| ||||||||| ||||| ||||||||||||||||| |||||||    
T  48352767 tttaagtttcaaaagttttaaataggtcattttagttgataaactatttcactgttaccc 48352708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 125 - 282
Target Start/End: Original strand, 27351059 - 27351217
Alignment:
Q  125 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 224  Q
    ||||| ||||||| || || ||| |||||  |||||||||||||||||||||||| ||| ||||||||||||| ||||| ||||| |||| |||||||||    
T  27351059 ttttactttgacagaattcgcaagttagtcctttaagtttcgaaagtttcaattaagtccttttagtttgacataattctcaagttagtcctttaagttt 27351158  T
Q  225 caaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 282  Q
    |||| || ||||||| ||| ||||| |||||||||||||||||||||||||||| ||||    
T  27351159 caaaagtatcaaataagtcattttagttgataaactatttcaccgttacccctgctgtc 27351217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 102 - 239
Target Start/End: Complemental strand, 29419189 - 29419051
Alignment:
Q  102 taggtcaaaaatca-ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaa 200  Q
    ||||||||| |||| |||| |||||||||||||||||||| | |||| ||||| ||| ||||||||||||||||||||||||| ||||||||||||||||    
T  29419189 taggtcaaatatcacttttggtccttttagtttgacataatttccaagttagtctttcaagtttcgaaagtttcaattaggtccttttagtttgacagaa 29419090  T
Q  201 ttcccaagtcagtcatttaagtttcaaatgtttcaaata 239  Q
    |||| || | |||| ||||||||||||| ||||||||||    
T  29419089 ttccaaaattagtcttttaagtttcaaaagtttcaaata 29419051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 116 - 274
Target Start/End: Complemental strand, 10686839 - 10686680
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||| ||||||||||||||||| || |  ||| |||||  |||||||||||||||||| | ||||||| ||||| ||  ||||||||| ||||| |||||    
T  10686839 ttttggtccttttagtttgacagaattttcaagttagtcctttaagtttcgaaagtttaagttaggtccttttacttcaacagaattctcaagttagtca 10686740  T
Q  216 tttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttaccc 274  Q
    ||||||||| ||| |||||||||||||| ||||| |||||||||||||||||||||||||    
T  10686739 tttaagttttaaaagtttcaaataggtcattttagttgataaactatttcaccgttaccc 10686680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 159 - 282
Target Start/End: Original strand, 8902803 - 8902927
Alignment:
Q  159 aagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaa 257  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||| ||||||||||||| |||| ||||| || |||||| ||||||||    
T  8902803 aagtttcgaaagtttcaattaagtcattttagtttgacaaaattcccaagttagtcctttaagtttcaaaagttttaaataagtccttttagttgataaa 8902902  T
Q  258 ctatttcaccgttacccctgatgtc 282  Q
     |||||||| |||||||||| ||||    
T  8902903 ttatttcactgttacccctgttgtc 8902927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 122 - 282
Target Start/End: Original strand, 34254504 - 34254665
Alignment:
Q  122 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 221  Q
    |||||||||||||||| || || ||| || ||  |||||| ||| ||||||| || ||| || |||||||||||||||||||| ||||||||| ||||||    
T  34254504 tccttttagtttgacagaattctcaagttggtcctttaaggttcaaaagttttaaatagatccttttagtttgacagaattcctaagtcagtcctttaag 34254603  T
Q  222 tttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctgatgtc 282  Q
    ||||||| ||||||||||  | |||||| | ||||||||||||||| |||||||||| ||||    
T  34254604 tttcaaaagtttcaaatatatgcttttagtcgataaactatttcactgttacccctgttgtc 34254665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 122 - 243
Target Start/End: Complemental strand, 44964192 - 44964072
Alignment:
Q  122 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 221  Q
    ||||||||||| |||| || || ||| ||||| ||| |||||||||||||||||||||| |||||||||||||||||||||| ||||| | || ||||||    
T  44964192 tccttttagttagacaaaattctcaagttagtcttt-aagtttcgaaagtttcaattagatcattttagtttgacagaattctcaagttattcctttaag 44964094  T
Q  222 tttcaaatgtttcaaataggtc 243  Q
    ||| ||| ||||||||||||||    
T  44964093 ttttaaaagtttcaaataggtc 44964072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 116 - 269
Target Start/End: Original strand, 1765693 - 1765846
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    ||||||||||||||||||||   || ||| || ||||| ||||||||||||||| ||| ||| ||||||| ||||||||||| |||| | || | ||||     
T  1765693 ttttagtccttttagtttgaacgaattcctaagttagt-ttttaagtttcgaaaattttaatcaggtcatgttagtttgacataatttctaaattagtcc 1765791  T
Q  216 tttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgt 269  Q
    ||||||||||||| |||| |||||| | |||||| ||||||||||||||||||||    
T  1765792 tttaagtttcaaaagttttaaatagatccttttagttgataaactatttcaccgt 1765846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 121 - 276
Target Start/End: Original strand, 10685852 - 10685999
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 220  Q
    ||||||||||||||||| || |  ||| |||||  ||||||||||||| |||||||||| ||| |||||||||||||||||| |||||| |||| |||||    
T  10685852 gtccttttagtttgacagaattttcaagttagtcctttaagtttcgaacgtttcaattacgtctttttagtttgacagaatttccaagttagtcctttaa 10685951  T
Q  221 gtttcaaatgtttcaaataggtcttttaattgataaactatttcaccgttacccct 276  Q
    ||||||||| | |||        ||||| |||||||||||||| ||||||||||||    
T  10685952 gtttcaaatatgtca--------ttttagttgataaactattttaccgttacccct 10685999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 116 - 222
Target Start/End: Original strand, 11897841 - 11897947
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||| ||| ||||||||||||| || || ||| |||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||     
T  11897841 ttttggtcattttagtttgacagaattctcaagttagtcatttaagtttcgaaagtttcaattaggtccttttagtttgacagaattcccaagttaatcc 11897940  T
Q  216 tttaagt 222  Q
    |||||||    
T  11897941 tttaagt 11897947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 98 - 239
Target Start/End: Complemental strand, 17898992 - 17898850
Alignment:
Q  98 attttaggtcaaaaatca-ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgac 196  Q
    ||||||||||||| | || |||| |||||||||||||||||| | || ||| |||||  |||||||||  ||| ||||||||||||| |||||||||||     
T  17898992 attttaggtcaaataccacttttggtccttttagtttgacatgattctcaaattagttctttaagttttaaaaatttcaattaggtccttttagtttgat 17898893  T
Q  197 agaattcccaagtcagtcatttaagtttcaaatgtttcaaata 239  Q
    ||||||| ||| | |||| ||||||||||||| ||||||||||    
T  17898892 agaattcacaaattagtcctttaagtttcaaaagtttcaaata 17898850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 156 - 269
Target Start/End: Original strand, 44963878 - 44963992
Alignment:
Q  156 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtctttt-aattgat 254  Q
    |||||||||||||||||||||| | ||| ||||||||||| || |||||||| | |||| ||||||||||||| |||| |||||  |||||| | |||||    
T  44963878 tttaagtttcgaaagtttcaataaagtccttttagtttgataggattcccaaattagtcctttaagtttcaaaagttttaaatatatcttttcagttgat 44963977  T
Q  255 aaactatttcaccgt 269  Q
    |||||||||||||||    
T  44963978 aaactatttcaccgt 44963992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 229
Target Start/End: Original strand, 49650578 - 49650686
Alignment:
Q  122 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagt-catttaa 220  Q
    ||||||||||||||||||| || ||| |||||  ||||| ||| |||| ||||||||||||| ||||||||||||||||||| ||||| ||| | |||||    
T  49650578 tccttttagtttgacataattctcaagttagtcctttaaattttgaaaatttcaattaggtccttttagtttgacagaattctcaagttagtccttttaa 49650677  T
Q  221 gtttcaaat 229  Q
    |||||||||    
T  49650678 gtttcaaat 49650686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 125 - 239
Target Start/End: Complemental strand, 1766044 - 1765930
Alignment:
Q  125 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 224  Q
    ||||| ||||||| || || ||| ||||| |||||| |||| ||||||| ||||| |||||||||||||||||||| || || || |||| |||||| ||    
T  1766044 ttttaatttgacagaattctcaagttagtcttttaaatttcaaaagtttaaattatgtcattttagtttgacagaaatctcatgttagtcctttaagctt 1765945  T
Q  225 caaatgtttcaaata 239  Q
    |||| ||||||||||    
T  1765944 caaaagtttcaaata 1765930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 121 - 235
Target Start/End: Complemental strand, 17898908 - 17898794
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 220  Q
    ||||||||||||||| | || || ||| |||||  |||||||||| |||||||||| || ||||||||||||||||||||||  ||| | |||| |||||    
T  17898908 gtccttttagtttgatagaattcacaaattagtcctttaagtttcaaaagtttcaaataagtcattttagtttgacagaattatcaaattagtcctttaa 17898809  T
Q  221 gtttcaaatgtttca 235  Q
     ||||||| ||||||    
T  17898808 atttcaaaagtttca 17898794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 49651083 - 49651013
Alignment:
Q  159 aagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaat 229  Q
    ||||||||||||||| || ||| |||||||||||||||||||||| ||||| |||| ||||||||||||||    
T  49651083 aagtttcgaaagttttaaatagatcattttagtttgacagaattctcaagttagtcctttaagtttcaaat 49651013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 274
Target Start/End: Complemental strand, 4772723 - 4772612
Alignment:
Q  155 ttttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtcttttaattgat 254  Q
    |||||||||| |||| ||| |||| |||| |||||||||||||||||| |||||| |||| ||||||||||||||     ||||   ||||||| |||||    
T  4772723 ttttaagttttgaaatttttaattgggtccttttagtttgacagaatttccaagttagtcctttaagtttcaaat-----aaat---tcttttagttgat 4772632  T
Q  255 aaactatttcaccgttaccc 274  Q
    ||||||||||| ||||||||    
T  4772631 aaactatttcatcgttaccc 4772612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 116 - 229
Target Start/End: Complemental strand, 27351660 - 27351547
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||| ||||||||| |||||||||| || ||| ||  || |||||||||||||||||| ||||| ||| ||||| ||||| ||||||| ||| | ||||     
T  27351660 ttttggtccttttaatttgacataattctcaagttgatactttaagtttcgaaagttttaattatgtcgttttattttgatagaattctcaaattagtcc 27351561  T
Q  216 tttaagtttcaaat 229  Q
    ||||||||||||||    
T  27351560 tttaagtttcaaat 27351547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 44964130 - 44964018
Alignment:
Q  125 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 224  Q
    ||||||||||||| || || ||| ||| |  |||||||||  |||||||||| |||||| ||||||||||||||||||| ||||| |||| ||||| |||    
T  44964130 ttttagtttgacagaattctcaagttattcctttaagttttaaaagtttcaaataggtccttttagtttgacagaattctcaagttagtcctttaaattt 44964031  T
Q  225 caaatgtttcaaa 237  Q
     ||| ||||||||    
T  44964030 taaaagtttcaaa 44964018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 228
Target Start/End: Complemental strand, 1765984 - 1765881
Alignment:
Q  125 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 224  Q
    ||||||||||||| || || ||  |||||  |||||| ||| |||||||||| || |||||||||||||||||||||| |||||| | || |||||||||    
T  1765984 ttttagtttgacagaaatctcatgttagtcctttaagcttcaaaagtttcaaataagtcattttagtttgacagaatttccaagttactcctttaagttt 1765885  T
Q  225 caaa 228  Q
    ||||    
T  1765884 caaa 1765881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 243
Target Start/End: Original strand, 11897845 - 11897908
Alignment:
Q  180 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc 243  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||| || ||||||| ||||||    
T  11897845 ggtcattttagtttgacagaattctcaagttagtcatttaagtttcgaaagtttcaattaggtc 11897908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 272
Target Start/End: Original strand, 39302339 - 39302427
Alignment:
Q  185 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttac 272  Q
    ||||||||||||||||||| ||| | | |  ||||||||||||| ||||| | ||||| |||||| |||||||||||||||||||||||    
T  39302339 ttttagtttgacagaattcacaaattaattctttaagtttcaaaagtttcgattaggttcttttagttgataaactatttcaccgttac 39302427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 282
Target Start/End: Original strand, 48352272 - 48352366
Alignment:
Q  192 ttgacagaattcccaagtcagtc----atttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctgatgtc 282  Q
    |||||||||||||||||| ||||    ||||| |||| ||| ||||||||||||| |||||| ||||||||||||||||||| |||||||| ||||    
T  48352272 ttgacagaattcccaagttagtccgtcatttaggtttaaaa-gtttcaaataggttcttttagttgataaactatttcaccgctacccctgctgtc 48352366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 156 - 203
Target Start/End: Original strand, 4030342 - 4030390
Alignment:
Q  156 tttaagtttcgaaagtttcaattaggt-cattttagtttgacagaattc 203  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||    
T  4030342 tttaagtttcgaaagtttcaattaggtcctttttagtttgacagaattc 4030390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 192
Target Start/End: Original strand, 27351114 - 27351186
Alignment:
Q  120 agtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 192  Q
    ||||||||||||||||||||| || ||| |||||  |||||||||| ||||| |||| || ||||||||||||    
T  27351114 agtccttttagtttgacataattctcaagttagtcctttaagtttcaaaagtatcaaataagtcattttagtt 27351186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 282
Target Start/End: Complemental strand, 8903340 - 8903237
Alignment:
Q  180 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctga 278  Q
    |||| ||||||||||||| ||||| ||||| | || |||||||||| || ||||||||||  || ||||| ||| |||| |||||||| ||||||||||     
T  8903340 ggtctttttagtttgacataattctcaagttaatcctttaagtttcgaaagtttcaaatatatcattttagttgctaaattatttcactgttacccctgt 8903241  T
Q  279 tgtc 282  Q
    ||||    
T  8903240 tgtc 8903237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 242
Target Start/End: Complemental strand, 34255070 - 34254998
Alignment:
Q  169 agtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt 242  Q
    ||||||||||||||   ||||||||||||||||| |||||| ||   ||||||||||||| |||||||||||||    
T  34255070 agtttcaattaggtatatttagtttgacagaatttccaagttag-attttaagtttcaaaagtttcaaataggt 34254998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 268
Target Start/End: Original strand, 2965499 - 2965583
Alignment:
Q  185 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccg 268  Q
    |||||||||||| |||||  ||||| |  | ||||||||||||| |||| ||||| ||| ||||| |||||||||||||||||||    
T  2965499 ttttagtttgaccgaattttcaagttatacctttaagtttcaaaagttttaaatatgtcattttagttgataaactatttcaccg 2965583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 8903344 - 8903268
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 192  Q
    |||| ||| |||||||||||||||| || ||| ||| |  ||||||||||||||||||||| ||  |||||||||||    
T  8903344 ttttggtctttttagtttgacataattctcaagttaatcctttaagtttcgaaagtttcaaatatatcattttagtt 8903268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 247
Target Start/End: Original strand, 10685851 - 10685918
Alignment:
Q  180 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtctttt 247  Q
    |||| ||||||||||||||||||  ||||| |||| |||||||||| || ||||||| || |||||||    
T  10685851 ggtccttttagtttgacagaattttcaagttagtcctttaagtttcgaacgtttcaattacgtctttt 10685918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 4772171 - 4772223
Alignment:
Q  177 ttaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaat 229  Q
    ||||||| ||||||||||||| ||||| ||||  |||| ||||||||||||||    
T  4772171 ttaggtccttttagtttgacaaaattcacaaggtagtcctttaagtttcaaat 4772223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 192
Target Start/End: Original strand, 8902824 - 8902896
Alignment:
Q  120 agtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 192  Q
    |||| ||||||||||||| || |||||| |||||  |||||||||| ||||||| || || ||| ||||||||    
T  8902824 agtcattttagtttgacaaaattcccaagttagtcctttaagtttcaaaagttttaaataagtccttttagtt 8902896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 27351054 - 27351110
Alignment:
Q  180 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaa 236  Q
    |||| ||||| ||||||||||||| ||||| |||| |||||||||| || |||||||    
T  27351054 ggtctttttactttgacagaattcgcaagttagtcctttaagtttcgaaagtttcaa 27351110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 39302809 - 39302753
Alignment:
Q  180 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaa 236  Q
    |||| ||||||||||||||||||| ||||| |||| ||||| ||| ||| |||||||    
T  39302809 ggtccttttagtttgacagaattctcaagttagtcctttaaattttaaaagtttcaa 39302753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 1e-41; HSPs: 80)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 122 - 282
Target Start/End: Original strand, 35214811 - 35214973
Alignment:
Q  122 tccttttagtttgacataactcccaatttagta-ttttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 220  Q
    |||||||||||||||| || | | || |||||  ||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| |||||    
T  35214811 tccttttagtttgacagaatttctaagttagttcttttaagtttcaaaagtttcaattaggtccttttagtttgacagaattctcaagttagtcttttaa 35214910  T
Q  221 gtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 282  Q
    ||||||||  ||||||||||||| ||||| |||||||||||||||||||||||||||| ||||    
T  35214911 gtttcaaaaatttcaaataggtctttttagttgataaactatttcaccgttacccctgttgtc 35214973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 104 - 282
Target Start/End: Complemental strand, 1441571 - 1441400
Alignment:
Q  104 ggtcaaaaatca-ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaatt 202  Q
    ||||||| |||| |||| |||||||||||||||||||| |||||| |||||  |||| ||||||||||||||||||||||||||||||||||| ||||||    
T  1441571 ggtcaaatatcacttttggtccttttagtttgacataattcccaagttagtcctttaggtttcgaaagtttcaattaggtcattttagtttgatagaatt 1441472  T
Q  203 cccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctgatgtc 282  Q
    ||||||| |||| ||||||||||         |||||||| |||||| ||||||||||||||||| |||||||||| ||||    
T  1441471 cccaagttagtcttttaagtttc---------aaataggtccttttagttgataaactatttcactgttacccctgctgtc 1441400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 124 - 267
Target Start/End: Complemental strand, 19925455 - 19925311
Alignment:
Q  124 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtt 223  Q
    |||||||||||||| || |||||| |||||  |||||||| ||||||||| |||||| || ||||||||||||||||||||||||| |||| ||||||||    
T  19925455 cttttagtttgacaaaattcccaacttagtcctttaagttgcgaaagttttaattagatccttttagtttgacagaattcccaagttagtcctttaagtt 19925356  T
Q  224 tcaaatgtttcaaataggt-cttttaattgataaactatttcacc 267  Q
    ||||| ||||||||||||| |||| | ||||||||||||||||||    
T  19925355 tcaaaagtttcaaataggtcctttcagttgataaactatttcacc 19925311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 121 - 277
Target Start/End: Original strand, 5559111 - 5559270
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagta-ttttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagt-cattt 218  Q
    ||||||||| ||||||| || |||||| |||||  ||||||||||| |||||||||| ||| || ||||||||||| | ||||||||||| ||| | |||    
T  5559111 gtccttttaatttgacagaattcccaagttagtccttttaagtttcaaaagtttcaaatagatccttttagtttgataaaattcccaagttagtcctttt 5559210  T
Q  219 aagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctg 277  Q
    |||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  5559211 aagtttcaaaagtttcaaataggtccttttagttgataaactatttcaccgttacccctg 5559270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 124 - 229
Target Start/End: Original strand, 31893257 - 31893362
Alignment:
Q  124 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtt 223  Q
    |||||||||||||| || || ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||    
T  31893257 cttttagtttgacagaattctcaagttagttttttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcctaagttagtcttttaagtt 31893356  T
Q  224 tcaaat 229  Q
    ||||||    
T  31893357 tcaaat 31893362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 121 - 264
Target Start/End: Original strand, 5805042 - 5805186
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 220  Q
    ||||||||||||||||| || || ||| |||||  |||||||||||||||||||||||||||| ||||||||||||||||||| ||||  | || |||||    
T  5805042 gtccttttagtttgacagaattctcaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaattctcaagctattcctttaa 5805141  T
Q  221 gtttcaaatgtttcaaataggt-cttttaattgataaactatttc 264  Q
    |||||||| |||| || ||||| |||||| |||||||||||||||    
T  5805142 gtttcaaaagttttaactaggtccttttagttgataaactatttc 5805186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 33879641 - 33879514
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||| ||||||||||||||||| || || ||| |||||  |||||||||||||||||||||||||||| ||||| |||||||||||| |||||| | ||     
T  33879641 ttttggtccttttagtttgacagaattcacaagttagtcctttaagtttcgaaagtttcaattaggtccttttaatttgacagaatttccaagttaatcc 33879542  T
Q  216 tttaagtttcaaatgtttcaaataggtc 243  Q
    ||||||||||||| ||||||||||||||    
T  33879541 tttaagtttcaaaagtttcaaataggtc 33879514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 122 - 239
Target Start/End: Original strand, 21433149 - 21433266
Alignment:
Q  122 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 221  Q
    |||||||||||||||| || || ||| |||||  ||||||||||||| |||||||||| ||| ||||||||||| ||||||||||||| |||||||||||    
T  21433149 tccttttagtttgacaaaattcacaagttagtcctttaagtttcgaatgtttcaattaagtccttttagtttgaaagaattcccaagttagtcatttaag 21433248  T
Q  222 tttcaaatgtttcaaata 239  Q
    ||||||| ||||||||||    
T  21433249 tttcaaaagtttcaaata 21433266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 116 - 282
Target Start/End: Original strand, 1286369 - 1286534
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||| ||||||||||||||| | || |  ||| ||||| |||||| |||| ||||||||||||||||| ||||||||||| |||||||  |||| ||||     
T  1286369 ttttcgtccttttagtttgatagaattttcaaattagttttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtct 1286468  T
Q  216 tttaagtttcaaatgtttcaaatagg-tcttttaattgataaactatttcaccgttacccctgatgtc 282  Q
    ||||||||||||| |||||||||||| ||||||| |||||||| ||  ||||||||||||||| ||||    
T  1286469 tttaagtttcaaaagtttcaaataggttcttttagttgataaatta--tcaccgttacccctgctgtc 1286534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 121 - 267
Target Start/End: Original strand, 23150643 - 23150790
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 220  Q
    |||||||||||||||||||| || ||| |||||  ||||| ||| |||||||||||||| ||||||||| ||||||||||||| ||  | |||| |||||    
T  23150643 gtccttttagtttgacataattctcaagttagtcctttaaattttgaaagtttcaattaagtcattttaatttgacagaattctcagattagtcttttaa 23150742  T
Q  221 gtttcaaatgtttcaaataggtc-ttttaattgataaactatttcacc 267  Q
    |||||||| ||||||||||  || ||||| ||||||||||||||||||    
T  23150743 gtttcaaaagtttcaaataaatcattttagttgataaactatttcacc 23150790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 121 - 282
Target Start/End: Original strand, 27995065 - 27995227
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 220  Q
    ||||||||||||||||| || || ||| ||||| ||||||||||| ||| ||| || ||| |||||||| ||||||||||||| ||||| | || |||||    
T  27995065 gtccttttagtttgacagaattctcaagttagtgttttaagtttcaaaaatttgaaatagatcattttaatttgacagaattctcaagttaatcctttaa 27995164  T
Q  221 gtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctgatgtc 282  Q
    |||||||| || ||||||| ||  ||||| ||||||||||||||||| |||||||||| ||||    
T  27995165 gtttcaaaagtatcaaataagtaattttagttgataaactatttcactgttacccctgctgtc 27995227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 122 - 275
Target Start/End: Original strand, 28256498 - 28256652
Alignment:
Q  122 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 221  Q
    |||||||||||||||| || |||||| ||| |  ||||| |||| ||||||| ||  || || ||||||||||||||||||| ||||| |||| |||||     
T  28256498 tccttttagtttgacagaattcccaagttacttctttaaatttcaaaagttttaaagagatccttttagtttgacagaattctcaagttagtcctttaaa 28256597  T
Q  222 tttcaaatgtttcaaatagg-tcttttaattgataaactatttcaccgttacccc 275  Q
    ||||||| |||||||||||| ||||||| ||||||||||||||||| ||||||||    
T  28256598 tttcaaaagtttcaaataggttcttttagttgataaactatttcactgttacccc 28256652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 125 - 282
Target Start/End: Original strand, 33235042 - 33235200
Alignment:
Q  125 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 224  Q
    ||||||||||||| || || ||| ||| |  ||||| |||  ||||||||||||||||| |||| |||||||||||||||||||| || | ||||| |||    
T  33235042 ttttagtttgacagaattctcaagttaatcctttaaattttaaaagtttcaattaggtccttttggtttgacagaattcccaagttagacctttaaattt 33235141  T
Q  225 caaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 282  Q
    |||| |||||||| ||||| ||||| |||||||||||||||| ||||||||||| ||||    
T  33235142 caaaagtttcaaagaggtcattttagttgataaactatttcatcgttacccctgttgtc 33235200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 121 - 282
Target Start/End: Complemental strand, 39959314 - 39959152
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 220  Q
    ||||||||||||||||| || |   || |||||  ||||| |||  |||||||||| ||| |  |||||||||||||||||| |||||| | ||||||||    
T  39959314 gtccttttagtttgacagaatttttaaattagtcatttaaatttgaaaagtttcaaatagattcttttagtttgacagaatttccaagttaatcatttaa 39959215  T
Q  221 gtttcaaatgtttcaaatagg-tcttttaattgataaactatttcaccgttacccctgatgtc 282  Q
    |||||||| |||||||||||| ||||||| |||||||||||||||||||||| | ||||||||    
T  39959214 gtttcaaaagtttcaaataggttcttttacttgataaactatttcaccgttaacgctgatgtc 39959152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 124 - 275
Target Start/End: Complemental strand, 1349269 - 1349114
Alignment:
Q  124 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaa---gtcagtcatttaa 220  Q
    ||||||||||||||||| | | || ||||| ||||||||||| ||||||| || ||  ||||||||||||||||||||| ||||    | |||| |||||    
T  1349269 cttttagtttgacataatttctaagttagtcttttaagtttcaaaagttttaaataaatcattttagtttgacagaatttccaacttataagtcctttaa 1349170  T
Q  221 gtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccc 275  Q
    |||||||| |||||||||||||| ||||| ||||||||| ||||||||||||||||    
T  1349169 gtttcaaaagtttcaaataggtcattttagttgataaaccatttcaccgttacccc 1349114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 116 - 229
Target Start/End: Complemental strand, 5559742 - 5559630
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||| ||||||||||||||||| || |||||| |||||  |||||||||  ||||||||||||||||| ||||||||||||||||||||||||| ||||     
T  5559742 ttttggtccttttagtttgacaaaattcccaagttagtcctttaagtttt-aaagtttcaattaggtccttttagtttgacagaattcccaagttagtcc 5559644  T
Q  216 tttaagtttcaaat 229  Q
    ||||||||||||||    
T  5559643 tttaagtttcaaat 5559630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 116 - 275
Target Start/End: Original strand, 20366048 - 20366206
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||| ||||||||||||| ||| || || ||| |||||  |||||||||||||||||||||||| ||| ||||||||||||||||||| | ||||| ||     
T  20366048 ttttggtccttttagttt-acagaattctcaagttagtcctttaagtttcgaaagtttcaattatgtccttttagtttgacagaattctc-agtcaatcc 20366145  T
Q  216 tttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccc 275  Q
     |||  ||||||  |||||||||||||| ||||| ||||||||||||||||||||||||||    
T  20366146 cttatatttcaagagtttcaaataggtctttttagttgataaactatttcaccgttacccc 20366206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 156 - 266
Target Start/End: Original strand, 34951266 - 34951377
Alignment:
Q  156 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgat 254  Q
    |||||||||||||||||||||||||||| |||| |||||||| |||||  |||| |||| ||||||||||||| |||||||||| ||| ||||| |||||    
T  34951266 tttaagtttcgaaagtttcaattaggtccttttcgtttgacataattcttaagttagtcctttaagtttcaaaagtttcaaataagtcattttagttgat 34951365  T
Q  255 aaactatttcac 266  Q
    ||||||||||||    
T  34951366 aaactatttcac 34951377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 168 - 277
Target Start/End: Original strand, 10619851 - 10619961
Alignment:
Q  168 aagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcac 266  Q
    |||||||||||||||  ||||||||||||| ||||  ||||| |||| ||||||||||||| ||||||||||||| |||||| |||||||||||||||||    
T  10619851 aagtttcaattaggttcttttagtttgacacaattgtcaagttagtcctttaagtttcaaaagtttcaaataggtccttttagttgataaactatttcac 10619950  T
Q  267 cgttacccctg 277  Q
    ||||| |||||    
T  10619951 cgttatccctg 10619961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 22876972 - 22876867
Alignment:
Q  122 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 221  Q
    ||||||||||||||||||| | |||| ||| | ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| | || ||||||    
T  22876972 tccttttagtttgacataatttccaagttaat-ttttaagtttcgaaagtttcaattaagtcattttagtttgacagaattctcaagttaatcctttaag 22876874  T
Q  222 tttcaaa 228  Q
    |||||||    
T  22876873 tttcaaa 22876867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 156 - 273
Target Start/End: Complemental strand, 31176042 - 31175924
Alignment:
Q  156 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgat 254  Q
    ||||| ||| |||||||||||||||||| |||||||||||||||||| |||||| |||| ||||||||||||| |||||||| |||| |||||| |||||    
T  31176042 tttaatttttgaaagtttcaattaggtccttttagtttgacagaatttccaagttagtcctttaagtttcaaaagtttcaaagaggtccttttagttgat 31175943  T
Q  255 aaactatttcaccgttacc 273  Q
    || ||||| || |||||||    
T  31175942 aatctattccaacgttacc 31175924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 103 - 240
Target Start/End: Original strand, 40904677 - 40904814
Alignment:
Q  103 aggtcaaaaatcattttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaatt 202  Q
    |||||||| | || ||| |||||||| ||||||||||| || ||| ||||| ||||||||||  ||||||||||||||||| ||||||||||||| ||||    
T  40904677 aggtcaaataccactttggtccttttggtttgacataattctcaagttagtcttttaagttttaaaagtttcaattaggtccttttagtttgacataatt 40904776  T
Q  203 cccaagtcagtcatttaagtttcaaatgtttcaaatag 240  Q
      ||| | |||||||||||||| ||| |||||||||||    
T  40904777 ttcaaattagtcatttaagttttaaaagtttcaaatag 40904814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 122 - 264
Target Start/End: Original strand, 1346485 - 1346624
Alignment:
Q  122 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 221  Q
    |||||||||||||||| || ||  || |||||  ||||||||||||||||||||||||  || ||||||||||||| |||| |||||| |||| ||||||    
T  1346485 tccttttagtttgacagaattcttaagttagtgctttaagtttcgaaagtttcaattaaatccttttagtttgacataatttccaagttagtcctttaag 1346584  T
Q  222 tttcaaatgtttcaaataggtcttttaattgataaactatttc 264  Q
    ||||||| ||||||   || ||||||| |||||||||||||||    
T  1346585 tttcaaaagtttca---agttcttttagttgataaactatttc 1346624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 103 - 229
Target Start/End: Complemental strand, 31893615 - 31893488
Alignment:
Q  103 aggtcaaaaatcattttag-tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaat 201  Q
    |||||||| |||||||| | |||||||||||||||| || | | || |||||  |||||||||  ||||||||||||||||| |||||||||||||||||    
T  31893615 aggtcaaatatcatttttggtccttttagtttgacagaatttctaagttagtcctttaagttttaaaagtttcaattaggtccttttagtttgacagaat 31893516  T
Q  202 tcccaagtcagtcatttaagtttcaaat 229  Q
    || ||||| |||| ||||||||||||||    
T  31893515 tctcaagttagtcctttaagtttcaaat 31893488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 116 - 277
Target Start/End: Original strand, 8039662 - 8039807
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||| |||||||||||||||||||| || ||| |||||  |||||||||||||||||||||||||||| ||||||||||| ||||                   
T  8039662 tttttgtccttttagtttgacataattctcaagttagttctttaagtttcgaaagtttcaattaggtccttttagtttgaaagaa--------------- 8039746  T
Q  216 tttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctg 277  Q
      ||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  8039747 --taagtttcaaaagtttcaaataggtccttttagttgataaactatttcaccgttacccctg 8039807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 116 - 269
Target Start/End: Complemental strand, 21413234 - 21413081
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||| |||||||||||| |||| || |||||| |||||  ||| |||||||||| ||||||||||| | ||||| |||||||||||| | |||| |||      
T  21413234 ttttggtccttttagttcgacagaattcccaaattagttattttagtttcgaaaatttcaattaggcccttttaatttgacagaatttctaagttagt-t 21413136  T
Q  216 tttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgt 269  Q
    ||||||||||||| ||||||||||||| |||||| || |||||||| ||||||||    
T  21413135 tttaagtttcaaaagtttcaaataggtccttttagttcataaactacttcaccgt 21413081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 274
Target Start/End: Complemental strand, 35215443 - 35215290
Alignment:
Q  122 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 221  Q
    |||||||||||||||| || |  ||| |||||  ||||| |||||||| ||||||||| ||||||||| |||||||||||| |||| | |||| ||||||    
T  35215443 tccttttagtttgacaaaattttcaagttagtcctttaaatttcgaaaatttcaattaagtcattttaatttgacagaatttccaaattagtcttttaag 35215344  T
Q  222 tttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttaccc 274  Q
    ||| ||| ||||||||||  || ||||| ||||||||||||||||  |||||||    
T  35215343 ttttaaaagtttcaaataactcattttagttgataaactatttcattgttaccc 35215290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 116 - 240
Target Start/End: Original strand, 21412865 - 21412989
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||||||||||||||||||||| || ||  || ||| |  ||||||||| ||||||||||||||| || ||||||||||||||||||  ||||| ||||     
T  21412865 ttttagtccttttagtttgacagaattcttaagttaatcctttaagttttgaaagtttcaattagatccttttagtttgacagaattttcaagttagtcc 21412964  T
Q  216 tttaagtttcaaatgtttcaaatag 240  Q
    ||||||||||||| |||| ||||||    
T  21412965 tttaagtttcaaaagttttaaatag 21412989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 274
Target Start/End: Complemental strand, 23679603 - 23679497
Alignment:
Q  168 aagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaatag-gtcttttaattgataaactatttcac 266  Q
    |||||||||||||||  ||||||||||||||||||| ||||| |||| ||||||||||||| |||| ||||||  | ||||| |||||||||||||||||    
T  23679603 aagtttcaattaggttcttttagtttgacagaattctcaagttagtc-tttaagtttcaaaagtttaaaatagattattttagttgataaactatttcac 23679505  T
Q  267 cgttaccc 274  Q
    ||||||||    
T  23679504 cgttaccc 23679497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 121 - 239
Target Start/End: Original strand, 36566282 - 36566400
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattc-ccaagtcagtcattta 219  Q
    ||||||||||||||||| || ||  || |||||  ||||||||| |||||||||||||||||||||||||||||||||||||| | |||| |||| ||||    
T  36566282 gtccttttagtttgacagaattcttaagttagtcatttaagttttgaaagtttcaattaggtcattttagtttgacagaattctcaaagttagtc-ttta 36566380  T
Q  220 agtttcaaatgtttcaaata 239  Q
    |||||||||  |||||||||    
T  36566381 agtttcaaaattttcaaata 36566400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 125 - 269
Target Start/End: Original strand, 20101831 - 20101974
Alignment:
Q  125 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 224  Q
    ||||||||||||  || |||||| ||||| |||||||||||||||||||||||||| || |||||||| ||||| |||  ||||| |||| |||||||||    
T  20101831 ttttagtttgactgaattcccaagttagt-ttttaagtttcgaaagtttcaattagatccttttagttcgacag-attttcaagttagtcctttaagttt 20101928  T
Q  225 caaatgtttcaaatag-gtcttttaattgataaactatttcaccgt 269  Q
     ||| |||| ||||||  ||| ||| ||||||||||||||||||||    
T  20101929 taaaagttttaaatagattctcttagttgataaactatttcaccgt 20101974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 116 - 229
Target Start/End: Complemental strand, 28257062 - 28256949
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||| ||||||||||||||| |||| ||  || ||||| |||||||||| |||| ||||||||||||||||||||||||||| ||||  ||||| ||||     
T  28257062 tttttgtccttttagtttgatataattctaaagttagttttttaagttttgaaaatttcaattaggtcattttagtttgacaaaattttcaagttagtcc 28256963  T
Q  216 tttaagtttcaaat 229  Q
    ||||||||| ||||    
T  28256962 tttaagttttaaat 28256949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 168 - 239
Target Start/End: Complemental strand, 21433408 - 21433337
Alignment:
Q  168 aagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaata 239  Q
    |||||||||||| ||||||||||||||||||||||||||||| | || ||||||||||||| ||||||||||    
T  21433408 aagtttcaattacgtcattttagtttgacagaattcccaagttaatcctttaagtttcaaaagtttcaaata 21433337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 156 - 274
Target Start/End: Complemental strand, 33235637 - 33235518
Alignment:
Q  156 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgat 254  Q
    |||| |||| |||||||| |||| |||| ||||||||||||| ||||  ||||| |||| |||||||||||||   |||||||||||| ||||| |||||    
T  33235637 tttacgttttgaaagttttaatttggtccttttagtttgacaaaattatcaagttagtcctttaagtttcaaaaacttcaaataggtcattttagttgat 33235538  T
Q  255 aaactatttcaccgttaccc 274  Q
    |||||||||||| |||||||    
T  33235537 aaactatttcactgttaccc 33235518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 116 - 206
Target Start/End: Original strand, 39958686 - 39958776
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattccca 206  Q
    |||| |||||||||||||||||||| |   || |||||  ||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  39958686 ttttggtccttttagtttgacataatttttaagttagtcatttaagtctcgaaagtttcaattaagtcattttagtttgacagaattccca 39958776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 122 - 238
Target Start/End: Original strand, 21412931 - 21413047
Alignment:
Q  122 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 221  Q
    |||||||||||||||| || |  ||| |||||  |||||||||| ||||||| || ||| |||||||||||| ||||||||| ||||| |||| ||||||    
T  21412931 tccttttagtttgacagaattttcaagttagtcctttaagtttcaaaagttttaaatagatcattttagtttcacagaattctcaagttagtcttttaag 21413030  T
Q  222 tttcaaatgtttcaaat 238  Q
    ||||||| |||| ||||    
T  21413031 tttcaaaagttttaaat 21413047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 116 - 228
Target Start/End: Complemental strand, 34951587 - 34951475
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||| ||| ||||||||||||| || |  ||| |||||  ||||||||||||||||||||||||| || ||||||||||||| |||| | || ||||||     
T  34951587 ttttggtctttttagtttgacagaattatcaagttagtcctttaagtttcgaaagtttcaattagatccttttagtttgacacaatttctaaatcagtcc 34951488  T
Q  216 tttaagtttcaaa 228  Q
    |||||||||||||    
T  34951487 tttaagtttcaaa 34951475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 5805679 - 5805592
Alignment:
Q  156 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc 243  Q
    ||||||||| |||||||||||||| ||| |||||||||||| |||||  ||||| | || ||||||||||||| ||||||||||||||    
T  5805679 tttaagttttgaaagtttcaattatgtccttttagtttgactgaattttcaagttaatcttttaagtttcaaaagtttcaaataggtc 5805592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 125 - 282
Target Start/End: Original strand, 20183778 - 20183935
Alignment:
Q  125 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 224  Q
    ||||||||||||| || |  ||||| |||  ||||| ||| ||||||||||||||| || ||| | ||| | ||| ||||||||| |||| |||||||||    
T  20183778 ttttagtttgacagaatttacaattcagttctttaaattttgaaagtttcaattagatcctttaa-tttaatagagttcccaagttagtcctttaagttt 20183876  T
Q  225 caaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 282  Q
    ||||  ||||||||| ||| ||||| |||||||| |||||||| |||||||||| ||||    
T  20183877 caaaaatttcaaataagtcattttagttgataaattatttcactgttacccctgttgtc 20183935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 41020242 - 41020137
Alignment:
Q  122 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 221  Q
    ||||||||||||||||||| | |||| ||||| |||||||||| |||||||| |||||| || |||||||||||||||||| | |||| | |  ||||||    
T  41020242 tccttttagtttgacataatttccaagttagt-ttttaagttttgaaagttttaattagatccttttagtttgacagaatttctaagttaattctttaag 41020144  T
Q  222 tttcaaa 228  Q
    |||||||    
T  41020143 tttcaaa 41020137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 4187545 - 4187626
Alignment:
Q  156 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaa 237  Q
    ||||||||| |||||||||||||||||  |||| |||||||| ||||||||||| |||  ||||||||||||| ||||||||    
T  4187545 tttaagtttagaaagtttcaattaggtactttttgtttgacataattcccaagttagttctttaagtttcaaaagtttcaaa 4187626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 21433391 - 21433278
Alignment:
Q  125 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagt-catttaagtt 223  Q
    ||||||||||||| || |||||| ||| |  |||||||||| |||||||||| || || ||||| |||||||||||||||||||| ||| | ||||||||    
T  21433391 ttttagtttgacagaattcccaagttaatcctttaagtttcaaaagtttcaaataagttatttttgtttgacagaattcccaagttagtacttttaagtt 21433292  T
Q  224 tcaaatgtttcaaa 237  Q
    |||||  |||||||    
T  21433291 tcaaaaatttcaaa 21433278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 274
Target Start/End: Original strand, 42990539 - 42990658
Alignment:
Q  156 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgat 254  Q
    ||||||||| |||||||| |||||||||||||||||| |||||||||  ||||| | |  ||||||||| ||| |||| || || ||| ||||| |||||    
T  42990539 tttaagttttgaaagttttaattaggtcattttagttcgacagaattttcaagttaattttttaagttttaaaagttttaattatgtcattttagttgat 42990638  T
Q  255 aaactatttcaccgttaccc 274  Q
    | ||||||| ||||||||||    
T  42990639 acactattttaccgttaccc 42990658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 282
Target Start/End: Complemental strand, 8040266 - 8040114
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 220  Q
    ||||||||||||| ||  || | |||| ||||| ||||||||||| ||| |||||| ||| || |||||| ||||||||| |||||||| |||| |||||    
T  8040266 gtccttttagtttaacggaatttccaaattagtcttttaagtttcaaaaatttcaaatagatccttttagcttgacagaa-tcccaagttagtcctttaa 8040168  T
Q  221 gtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctgatgtc 282  Q
             ||||||||||||| |||||| ||||| |||||||||||||||||||||| ||||    
T  8040167 ---------gtttcaaataggtccttttagttgatgaactatttcaccgttacccctgctgtc 8040114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 164 - 229
Target Start/End: Complemental strand, 10620303 - 10620238
Alignment:
Q  164 tcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaat 229  Q
    |||||||||||||||||| | ||||||||| |||||||| |||||| |||| ||||||||||||||    
T  10620303 tcgaaagtttcaattaggcccttttagtttaacagaatttccaagtaagtcctttaagtttcaaat 10620238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 116 - 241
Target Start/End: Original strand, 19925104 - 19925228
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||| ||| ||||||||||||| || | |||| ||| |  || |||||||||||||||||||||| || ||||||||||||| |||| |||| | ||||     
T  19925104 ttttggtctttttagtttgacagaatttccaagttactccttcaagtttcgaaagtttcaattagatccttttagtttgacacaatttccaa-ttagtcc 19925202  T
Q  216 tttaagtttcaaatgtttcaaatagg 241  Q
    |||||||||||||  | |||||||||    
T  19925203 tttaagtttcaaaaatatcaaatagg 19925228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 121 - 257
Target Start/End: Complemental strand, 20366658 - 20366521
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 220  Q
    ||||||||||||  ||| || | |||| |||||  |||||||||| |||||||| |  || || ||||||||||||| ||||| ||||| |||| ||||     
T  20366658 gtccttttagttaaacagaatttccaagttagtcctttaagtttcaaaagtttccaaaagatccttttagtttgacaaaattcgcaagttagtcctttag 20366559  T
Q  221 gtttcaaatgtttcaaataggt-cttttaattgataaa 257  Q
    |||||||| |||||||||| || |||||| ||||||||    
T  20366558 gtttcaaaagtttcaaatatgtccttttagttgataaa 20366521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 36566377 - 36566458
Alignment:
Q  156 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaa 237  Q
    |||||||||| ||| |||||| || ||||||||||||||||| ||||| ||||| |||| ||||| ||||||| ||||||||    
T  36566377 tttaagtttcaaaattttcaaataagtcattttagtttgacaaaattctcaagttagtcctttaaatttcaaaagtttcaaa 36566458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 168 - 267
Target Start/End: Complemental strand, 4187763 - 4187663
Alignment:
Q  168 aagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcac 266  Q
    |||||| |||||| || ||||| ||||||||||||  ||||| |||| ||||| ||| ||| |||| ||||||||| ||||| |||||||||||||||||    
T  4187763 aagttttaattagatccttttaatttgacagaattttcaagttagtcctttaaattttaaaagttttaaataggtcattttagttgataaactatttcac 4187664  T
Q  267 c 267  Q
    |    
T  4187663 c 4187663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 265
Target Start/End: Complemental strand, 6220449 - 6220351
Alignment:
Q  167 aaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttca 265  Q
    ||||||||||| ||||  ||||||||| | ||||||| ||||| |||| ||||||||||||| ||||  ||||||| |||||| ||||||||||||||||    
T  6220449 aaagtttcaataaggtacttttagtttcatagaattctcaagttagtc-tttaagtttcaaaagttttcaataggttcttttagttgataaactatttca 6220351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 228
Target Start/End: Complemental strand, 33879576 - 33879470
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 220  Q
    ||||||||| ||||||| || | |||| ||| |  |||||||||| |||||||||| |||||| |||||||| |||| ||||||||||| ||||  ||||    
T  33879576 gtccttttaatttgacagaatttccaagttaatcctttaagtttcaaaagtttcaaataggtccttttagttcgacataattcccaagttagtc-cttaa 33879478  T
Q  221 gtttcaaa 228  Q
    ||||||||    
T  33879477 gtttcaaa 33879470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 211 - 277
Target Start/End: Complemental strand, 1286834 - 1286768
Alignment:
Q  211 agtcatttaagtttcaaatgtttcaaataggtcttttaattgataaactatttcaccgttacccctg 277  Q
    |||| ||||||||| ||| |||| ||||| |||||||| |||||||| |||||||||||||||||||    
T  1286834 agtcctttaagttttaaaagttttaaatatgtcttttagttgataaattatttcaccgttacccctg 1286768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 176
Target Start/End: Original strand, 1441011 - 1441065
Alignment:
Q  122 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaa 176  Q
    |||||||||||||||| || |||||| ||||||||||||||||| ||||||||||    
T  1441011 tccttttagtttgacagaattcccaagttagtattttaagtttcaaaagtttcaa 1441065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 273
Target Start/End: Original strand, 28104300 - 28104394
Alignment:
Q  180 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacc 273  Q
    |||| |||||||||| || ||||| ||||  |||||||||||||||||| |||| ||||| ||| ||||| |||||||| |||||||| ||||||    
T  28104300 ggtccttttagtttggcataattcacaaggtagtcatttaagtttcaaaagttttaaatatgtctttttagttgataaattatttcactgttacc 28104394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 282
Target Start/End: Complemental strand, 27995615 - 27995538
Alignment:
Q  206 aagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 282  Q
    |||| |||| ||||||||||||| |||| |||||| || ||||| ||||||||||||||||||||||| |||| ||||    
T  27995615 aagttagtcctttaagtttcaaaagttttaaatagatccttttagttgataaactatttcaccgttactcctgttgtc 27995538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 1441014 - 1441066
Alignment:
Q  185 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaa 237  Q
    ||||||||||||||||||||||||| |||  ||||||||||||| ||||||||    
T  1441014 ttttagtttgacagaattcccaagttagtattttaagtttcaaaagtttcaaa 1441066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 95 - 214
Target Start/End: Original strand, 5075325 - 5075444
Alignment:
Q  95 tatattttaggtcaaaaatcattttag-tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagttt 193  Q
    |||||||||||||||| ||||| || | | |||||||||||||| | ||| ||| |||||  |||||||||  ||||||||||||  ||| ||||| |||    
T  5075325 tatattttaggtcaaatatcatgtttgattcttttagtttgacagatctctcaagttagtcctttaagttttaaaagtttcaattgagtcctttta-ttt 5075423  T
Q  194 gacagaattcccaagtcagtc 214  Q
    |||||||||| ||||| ||||    
T  5075424 gacagaattctcaagttagtc 5075444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 243
Target Start/End: Original strand, 5805041 - 5805104
Alignment:
Q  180 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc 243  Q
    |||| ||||||||||||||||||| ||||| |||| |||||||||| || ||||||| ||||||    
T  5805041 ggtccttttagtttgacagaattctcaagttagtcctttaagtttcgaaagtttcaattaggtc 5805104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 239
Target Start/End: Complemental strand, 29591171 - 29591057
Alignment:
Q  127 ttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagt--cagtcatttaagttt 224  Q
    ||||||||| |||| |  ||| |||||  |||||||||| ||||||| ||||||||||||||||||||||| ||| | |||||   | || |||||||||    
T  29591171 ttagtttgatataattatcaagttagtcctttaagtttcaaaagttttaattaggtcattttagtttgacaaaatccgcaagttataatcctttaagttt 29591072  T
Q  225 caaatgtttcaaata 239  Q
    |||| |||| |||||    
T  29591071 caaaagttttaaata 29591057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 192
Target Start/End: Original strand, 35214871 - 35214942
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 192  Q
    ||||||||||||||||| || || ||| ||||| ||||||||||| ||| |||||| |||||| ||||||||    
T  35214871 gtccttttagtttgacagaattctcaagttagtcttttaagtttcaaaaatttcaaataggtctttttagtt 35214942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 192
Target Start/End: Complemental strand, 19925397 - 19925327
Alignment:
Q  122 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 192  Q
    |||||||||||||||| || |||||| |||||  |||||||||| |||||||||| |||||| ||| ||||    
T  19925397 tccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagtttcaaataggtcctttcagtt 19925327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 34951521 - 34951415
Alignment:
Q  122 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 221  Q
    |||||||||||||||| || | | || | |||  |||||||||| ||||| | || || | | ||||||||||||| ||||| ||||| |||||||||||    
T  34951521 tccttttagtttgacacaatttctaaatcagtcctttaagtttcaaaagtataaaatatgaccttttagtttgacacaattctcaagttagtcatttaag 34951422  T
Q  222 tttcaaa 228  Q
    |||||||    
T  34951421 tttcaaa 34951415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 40904755 - 40904837
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattc 203  Q
    |||||||||||||||||||| |  ||| |||||  |||||||||  |||||||||| ||| || ||||| |||||||||||||    
T  40904755 gtccttttagtttgacataattttcaaattagtcatttaagttttaaaagtttcaaatagatccttttaatttgacagaattc 40904837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 5559110 - 5559171
Alignment:
Q  180 ggtcattttagtttgacagaattcccaagtcagt-catttaagtttcaaatgtttcaaatag 240  Q
    |||| ||||| ||||||||||||||||||| ||| | ||||||||||||| |||||||||||    
T  5559110 ggtccttttaatttgacagaattcccaagttagtccttttaagtttcaaaagtttcaaatag 5559171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 28104279 - 28104372
Alignment:
Q  99 ttttaggtcaaaaatcattttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 192  Q
    |||||||||||| || ||||| |||||||||||||| ||||| || |||  ||||  |||||||||| ||||||| || || ||| ||||||||    
T  28104279 ttttaggtcaaatattattttggtccttttagtttggcataattcacaaggtagtcatttaagtttcaaaagttttaaatatgtctttttagtt 28104372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 31893498 - 31893438
Alignment:
Q  168 aagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaa 228  Q
    ||||||||| || ||| ||||||||||||| ||||| ||||| |||| |||||||||||||    
T  31893498 aagtttcaaataagtccttttagtttgacaaaattctcaagttagtcctttaagtttcaaa 31893438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 33879349 - 33879417
Alignment:
Q  155 ttttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtt 223  Q
    |||||||||| |||||||| |||||| || ||||| ||||||||||||  ||||| |||||||| ||||    
T  33879349 ttttaagttttgaaagttttaattagatccttttattttgacagaattatcaagttagtcattttagtt 33879417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 192
Target Start/End: Complemental strand, 5805654 - 5805583
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 192  Q
    ||||||||||||||||  || |  ||| ||| | ||||||||||| |||||||||| |||||||||||||||    
T  5805654 gtccttttagtttgactgaattttcaagttaatcttttaagtttcaaaagtttcaaataggtcattttagtt 5805583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 195
Target Start/End: Original strand, 21433207 - 21433282
Alignment:
Q  120 agtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttga 195  Q
    |||||||||||||||| | || |||||| |||||  |||||||||| |||||||||| || ||  |||||||||||    
T  21433207 agtccttttagtttgaaagaattcccaagttagtcatttaagtttcaaaagtttcaaataagttcttttagtttga 21433282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 192
Target Start/End: Complemental strand, 31176017 - 31175946
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 192  Q
    ||||||||||||||||| || | |||| |||||  |||||||||| ||||||||||  ||||| ||||||||    
T  31176017 gtccttttagtttgacagaatttccaagttagtcctttaagtttcaaaagtttcaaagaggtccttttagtt 31175946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 243
Target Start/End: Complemental strand, 31893597 - 31893534
Alignment:
Q  180 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc 243  Q
    |||| |||||||||||||||||| | |||| |||| ||||||||| ||| ||||||| ||||||    
T  31893597 ggtccttttagtttgacagaatttctaagttagtcctttaagttttaaaagtttcaattaggtc 31893534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 192
Target Start/End: Original strand, 34951291 - 34951362
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 192  Q
    |||||||| ||||||||||| ||  || |||||  |||||||||| |||||||||| || ||||||||||||    
T  34951291 gtccttttcgtttgacataattcttaagttagtcctttaagtttcaaaagtttcaaataagtcattttagtt 34951362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 243
Target Start/End: Original strand, 36566281 - 36566344
Alignment:
Q  180 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc 243  Q
    |||| |||||||||||||||||||  |||| ||||||||||||||  || ||||||| ||||||    
T  36566281 ggtccttttagtttgacagaattcttaagttagtcatttaagttttgaaagtttcaattaggtc 36566344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 229
Target Start/End: Complemental strand, 36566568 - 36566525
Alignment:
Q  186 tttagtttgacagaattcccaagtcagtcatttaagtttcaaat 229  Q
    ||||||||||||||||| |||||| |||| ||||||||||||||    
T  36566568 tttagtttgacagaatttccaagttagtcttttaagtttcaaat 36566525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 243
Target Start/End: Original strand, 31893258 - 31893316
Alignment:
Q  185 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc 243  Q
    ||||||||||||||||||| ||||| |||  |||||||||| || ||||||| ||||||    
T  31893258 ttttagtttgacagaattctcaagttagttttttaagtttcgaaagtttcaattaggtc 31893316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 243
Target Start/End: Original strand, 33235039 - 33235100
Alignment:
Q  182 tcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc 243  Q
    |||||||||||||||||||||| ||||| | || ||||| ||| ||| ||||||| ||||||    
T  33235039 tcattttagtttgacagaattctcaagttaatcctttaaattttaaaagtttcaattaggtc 33235100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 4187573 - 4187625
Alignment:
Q  124 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaa 176  Q
    ||||| ||||||||||| |||||| |||||  |||||||||| ||||||||||    
T  4187573 ctttttgtttgacataattcccaagttagttctttaagtttcaaaagtttcaa 4187625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 192
Target Start/End: Original strand, 10619867 - 10619935
Alignment:
Q  124 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 192  Q
    |||||||||||||| || |  ||| |||||  |||||||||| |||||||||| |||||| ||||||||    
T  10619867 cttttagtttgacacaattgtcaagttagtcctttaagtttcaaaagtttcaaataggtccttttagtt 10619935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 27995064 - 27995112
Alignment:
Q  180 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaa 228  Q
    |||| ||||||||||||||||||| ||||| |||  |||||||||||||    
T  27995064 ggtccttttagtttgacagaattctcaagttagtgttttaagtttcaaa 27995112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 34951583 - 34951527
Alignment:
Q  180 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaa 236  Q
    |||| ||||||||||||||||||  ||||| |||| |||||||||| || |||||||    
T  34951583 ggtctttttagtttgacagaattatcaagttagtcctttaagtttcgaaagtttcaa 34951527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 6e-40; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 125 - 275
Target Start/End: Complemental strand, 36418516 - 36418365
Alignment:
Q  125 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 224  Q
    |||||||||||||||| || ||| |||||  |||| ||||| ||||||||||||||||| ||||||||||||| ||||  ||||| |||| |||||||||    
T  36418516 ttttagtttgacataattctcaagttagtcctttacgtttcaaaagtttcaattaggtccttttagtttgacataattttcaagttagtcctttaagttt 36418417  T
Q  225 caaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccc 275  Q
    |||| ||||||||||||| |||||| ||||||||||||||||||||||||||    
T  36418416 caaaagtttcaaataggtccttttagttgataaactatttcaccgttacccc 36418365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 116 - 274
Target Start/End: Original strand, 20728527 - 20728686
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||| ||| ||||||||||||| || | |||| |||||  ||||||||||||||| |||||||||||| ||||||||| ||||||||| ||||| ||||     
T  20728527 ttttggtctttttagtttgacagaatttccaagttagtcctttaagtttcgaaagattcaattaggtccttttagtttaacagaattctcaagttagtcc 20728626  T
Q  216 tttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttaccc 274  Q
    ||||||||| ||| |||||||||| ||| ||||| |||| ||||||||||||||||||||    
T  20728627 tttaagttttaaaagtttcaaatatgtctttttagttgaaaaactatttcaccgttaccc 20728686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 116 - 270
Target Start/End: Original strand, 13543083 - 13543241
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaag---tcag 212  Q
    |||| |||||||||||||||||||| ||| || ||| |  |||||||||||||||||||||||||||| |||||||||||  ||||| |||||   | ||    
T  13543083 ttttggtccttttagtttgacataattcctaagttaattctttaagtttcgaaagtttcaattaggtctttttagtttgatggaatttccaagttattag 13543182  T
Q  213 tcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgtt 270  Q
    || ||||||||||||| |||||||||| ||| ||||| |||||||| ||||||||||||    
T  13543183 tcctttaagtttcaaaagtttcaaatatgtcattttagttgataaattatttcaccgtt 13543241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 122 - 274
Target Start/End: Complemental strand, 30738377 - 30738223
Alignment:
Q  122 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 221  Q
    |||||||||||||||| || | | || ||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||| |||||  ||| |||| |    
T  30738377 tccttttagtttgacagaatttcgaagttagtattttaagtttcgaaatttt-aattaggtcattttaatttgacagaattctcaagtttgtcctttatg 30738279  T
Q  222 tttcaaatgtttcaaataggtc-ttttaat--tgataaactatttcaccgttaccc 274  Q
    ||||||| |||||||||| ||| ||||| |  ||||||||||||||||||||||||    
T  30738278 tttcaaaagtttcaaatatgtcattttagttgtgataaactatttcaccgttaccc 30738223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 155 - 282
Target Start/End: Original strand, 18248996 - 18249124
Alignment:
Q  155 ttttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattga 253  Q
    ||||| |||| |||||||| || || ||| ||||||||| ||||||||| ||||| |||||||||||||||||| |||| ||||||||| ||||| ||||    
T  18248996 ttttacgttttgaaagttttaactatgtccttttagtttaacagaattctcaagttagtcatttaagtttcaaaagttttaaataggtctttttagttga 18249095  T
Q  254 taaactatttcaccgttacccctgatgtc 282  Q
    |||||||||||| ||||||||||| ||||    
T  18249096 taaactatttcatcgttacccctgctgtc 18249124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 5734502 - 5734628
Alignment:
Q  156 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgat 254  Q
    ||||||||| |||||||||||||| ||||||||| |||||||||||||| |||| | || ||||||||| ||| |||||||||| ||| ||||| || ||    
T  5734502 tttaagttttgaaagtttcaattatgtcattttaatttgacagaattcctaagtta-tcctttaagttttaaaagtttcaaataagtcattttagttaat 5734600  T
Q  255 aaactatttcaccgttacccctgatgtc 282  Q
    ||||||||||||||||||||||| ||||    
T  5734601 aaactatttcaccgttacccctgctgtc 5734628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 103 - 269
Target Start/End: Complemental strand, 6336458 - 6336298
Alignment:
Q  103 aggtcaaaaatcattttagtccttttagtttgacataactcccaatttagtatttt-aagtttcgaaagtttcaattaggtcattttagtttgacagaat 201  Q
    |||||||| |||||||| ||||||||||||||||||||        ||||| |||| |||||||||||||||||||||| |  ||||| |||| ||||||    
T  6336458 aggtcaaatatcattttggtccttttagtttgacataa--------ttagtctttttaagtttcgaaagtttcaattagattcttttaatttgtcagaat 6336367  T
Q  202 tcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgt 269  Q
    ||| |||| |||| ||||| |||||||||||||||||| || |||| | ||||||||||||||||||||    
T  6336366 tcctaagttagtcctttaaatttcaaatgtttcaaatatgtcctttcagttgataaactatttcaccgt 6336298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 121 - 277
Target Start/End: Complemental strand, 5735100 - 5734944
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 220  Q
    |||||||||||||||   || || ||| |||||  ||||| |||||||| ||| ||||| ||| ||||||||| ||||||||| ||||| |||| |||||    
T  5735100 gtccttttagtttgatcgaattctcaagttagtcatttaaatttcgaaaattttaattatgtccttttagtttaacagaattctcaagttagtcctttaa 5735001  T
Q  221 gtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctg 277  Q
    ||| |||| |||||||||||||| ||||| |||||||||||||||||| |||||||||    
T  5735000 gtt-caaaagtttcaaataggtcattttagttgataaactatttcaccattacccctg 5734944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 124 - 237
Target Start/End: Original strand, 32660266 - 32660379
Alignment:
Q  124 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtt 223  Q
    |||||||||| ||| || || ||| |||||  |||||||||| |||||||||| ||||||||||||||||||||||||||| |||| |||| ||||||||    
T  32660266 cttttagttttacaaaattctcaagttagtcctttaagtttcaaaagtttcaaataggtcattttagtttgacagaattcctaagttagtcctttaagtt 32660365  T
Q  224 tcaaatgtttcaaa 237  Q
    ||||| ||||||||    
T  32660366 tcaaaagtttcaaa 32660379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 156 - 276
Target Start/End: Original strand, 30737779 - 30737900
Alignment:
Q  156 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtcttttaa-ttgat 254  Q
    ||||| |||||||||||||||||| ||| ||||||||||||| ||||| ||| | |||| ||||||||||||| |||| ||||| ||| ||||| |||||    
T  30737779 tttaaatttcgaaagtttcaattacgtctttttagtttgacataattctcaaattagtcttttaagtttcaaaagttttaaataagtcatttaagttgat 30737878  T
Q  255 aaactatttcaccgttacccct 276  Q
    ||||| ||| ||||||||||||    
T  30737879 aaactgttttaccgttacccct 30737900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 121 - 237
Target Start/End: Original strand, 6336147 - 6336263
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 220  Q
    |||||||||||||| || || | |||| |||||  |||||||||| ||||||| || |||||||||||||||||| |||||| |||||| |||| |||||    
T  6336147 gtccttttagtttggcagaatttccaagttagtcctttaagtttcaaaagttttaaataggtcattttagtttgaaagaatttccaagttagtcctttaa 6336246  T
Q  221 gtttcaaatgtttcaaa 237  Q
    |||||||| ||||||||    
T  6336247 gtttcaaaagtttcaaa 6336263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 180 - 274
Target Start/End: Original strand, 32459430 - 32459525
Alignment:
Q  180 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttaccc 274  Q
    |||| ||||||||||||| ||||| ||||| |||||||||||||||||| |||| ||||||||| ||||| ||||||||||||||||| |||||||    
T  32459430 ggtccttttagtttgacaaaattcacaagttagtcatttaagtttcaaaagttttaaataggtcattttagttgataaactatttcactgttaccc 32459525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 35189898 - 35190024
Alignment:
Q  102 taggtcaaaaatca-ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaa 200  Q
    ||||||||| |||| |||||||| ||||| ||||| | || || ||| ||||| ||| ||||||||||||||| || |||||||||||||||||||||||    
T  35189898 taggtcaaatatcacttttagtcattttaatttgatagaattctcaagttagtcttt-aagtttcgaaagttttaaataggtcattttagtttgacagaa 35189996  T
Q  201 ttcccaagtcagtcatttaagtttcaaa 228  Q
     |||||||| |||| |||||||||||||    
T  35189997 ctcccaagttagtcctttaagtttcaaa 35190024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 121 - 243
Target Start/End: Original strand, 18951307 - 18951429
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 220  Q
    ||||||||||||||||| || |||||| |||||  |||||||||| ||||||| || ||| || ||||||||||| ||||||| ||||| |||| |||||    
T  18951307 gtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagttttaaatagatccttttagtttgatagaattctcaagttagtcctttaa 18951406  T
Q  221 gtttcaaatgtttcaaataggtc 243  Q
    |||| ||| |||| |||||||||    
T  18951407 gttttaaaagttttaaataggtc 18951429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 124 - 229
Target Start/End: Original strand, 26275511 - 26275616
Alignment:
Q  124 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtt 223  Q
    |||||||||||||| || | | || |||||  |||||||||| |||||||||| ||| ||||||||||||||| |||||||||||| ||||||| |||||    
T  26275511 cttttagtttgacagaatttctaagttagttctttaagtttcaaaagtttcaaatagatcattttagtttgacggaattcccaagttagtcattcaagtt 26275610  T
Q  224 tcaaat 229  Q
    ||||||    
T  26275611 tcaaat 26275616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 32660238 - 32660325
Alignment:
Q  156 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc 243  Q
    |||||||||||||||||||||||| ||  ||||||||| ||| ||||| ||||| |||| ||||||||||||| ||||||||||||||    
T  32660238 tttaagtttcgaaagtttcaattatgttcttttagttttacaaaattctcaagttagtcctttaagtttcaaaagtttcaaataggtc 32660325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 277
Target Start/End: Original strand, 13538468 - 13538625
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagt-- 213  Q
    |||| |||||||||||||||||||| ||| || |||||  |||| |||||||||||||||||||||||  |||||||||| ||||||  ||||| | |      
T  13538468 ttttggtccttttagtttgacataattcctaagttagtcctttacgtttcgaaagtttcaattaggtctgtttagtttgatagaattttcaagttattag 13538567  T
Q  214 --catttaagtttcaaatgtttcaaataggtcttttaattgataaactatttcaccgttacccctg 277  Q
      | |||||||||||||| | |||        ||||| ||||||||||||||||||||||||||||    
T  13538568 tccttttaagtttcaaatatgtca--------ttttagttgataaactatttcaccgttacccctg 13538625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 229
Target Start/End: Original strand, 36417891 - 36417998
Alignment:
Q  122 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 221  Q
    |||||||||||| ||| || || ||| |||||  ||||| |||||||||||||||||||||  |||| |||||||| ||||| ||||| |||| ||||||    
T  36417891 tccttttagtttaacagaattctcaagttagtcctttaaatttcgaaagtttcaattaggttcttttggtttgacataattctcaagttagtcctttaag 36417990  T
Q  222 tttcaaat 229  Q
    ||||||||    
T  36417991 tttcaaat 36417998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 116 - 273
Target Start/End: Complemental strand, 13543727 - 13543569
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    ||||| || ||||||||||||| || || ||| ||||| |||||| |||| |||||||  |  || || ||||||||||  |||||||  |||| | ||     
T  13543727 ttttactctttttagtttgacagaattctcaaattagttttttaaatttcaaaagtttttaacagatccttttagtttggaagaattcttaagttaatcc 13543628  T
Q  216 tttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacc 273  Q
    ||||| ||||||| ||||||||||||| |||||| ||||||||||||||||| ||||||    
T  13543627 tttaaatttcaaaagtttcaaataggttcttttacttgataaactatttcactgttacc 13543569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 185 - 274
Target Start/End: Complemental strand, 20729100 - 20729010
Alignment:
Q  185 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttaccc 274  Q
    ||||||||||||||||||  ||||| |||| ||||| ||| ||| ||||||||||||| |||||| |||||||||||||||||| ||||||    
T  20729100 ttttagtttgacagaattttcaagttagtcctttaaattttaaaagtttcaaataggtccttttagttgataaactatttcaccattaccc 20729010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 203
Target Start/End: Complemental strand, 38405654 - 38405573
Alignment:
Q  122 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattc 203  Q
    |||||||||||| ||| || |||||| ||| |  |||||||||||||||||||||||| |||||||||||||| ||||||||    
T  38405654 tccttttagtttcacagaattcccaagttaatcatttaagtttcgaaagtttcaattatgtcattttagtttggcagaattc 38405573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 189 - 272
Target Start/End: Complemental strand, 18238390 - 18238306
Alignment:
Q  189 agtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttac 272  Q
    ||||||||| |||| |||||| |||| ||||||||||||| |||| ||||||||| ||||| |||||||| ||||||||||||||    
T  18238390 agtttgacaaaatttccaagttagtcgtttaagtttcaaaagttttaaataggtcattttagttgataaattatttcaccgttac 18238306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 282
Target Start/End: Complemental strand, 35891317 - 35891219
Alignment:
Q  185 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaat-aggtcttttaattgataaactatttcaccgttacccctgatgtc 282  Q
    ||||||||||||| ||||  ||||| |||| ||||||||||||| ||||||||| || | ||||  |||||||||||||||| ||||||||||| ||||    
T  35891317 ttttagtttgacataattttcaagttagtcctttaagtttcaaaagtttcaaataagttttttttgttgataaactatttcagcgttacccctgctgtc 35891219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 180 - 229
Target Start/End: Complemental strand, 31814003 - 31813954
Alignment:
Q  180 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaat 229  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  31814003 ggtccttttagtttgacagaattcccaagttagtcatttaagtttcaaat 31813954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 121 - 264
Target Start/End: Original strand, 1722504 - 1722648
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 220  Q
    ||||||||||||| ||| || || ||| |||||  ||||| |||| ||||||| || ||| |  ||||||||||||| ||||| ||||| | || |||||    
T  1722504 gtccttttagtttaacaaaattcacaagttagtcctttaattttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaa 1722603  T
Q  221 gtttcaaatgtttcaaataggtc-ttttaattgataaactatttc 264  Q
    |||||||| |||||||||| ||| ||||| || ||||| ||||||    
T  1722604 gtttcaaaagtttcaaatatgtcattttagtttataaattatttc 1722648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 18951306 - 18951366
Alignment:
Q  180 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaatag 240  Q
    |||| ||||||||||||||||||||||||| |||| ||||||||||||| |||| ||||||    
T  18951306 ggtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagttttaaatag 18951366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 227
Target Start/End: Complemental strand, 35190497 - 35190426
Alignment:
Q  156 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaa 227  Q
    ||||||||| |||||||||||||||||| ||||||||||||| ||||| ||| |  ||| ||||||||||||    
T  35190497 tttaagttttgaaagtttcaattaggtccttttagtttgacaaaattctcaaatttgtcttttaagtttcaa 35190426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 116 - 239
Target Start/End: Original strand, 14235567 - 14235688
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||| ||||||||||||||| |||| |   || |||||  ||||||||   ||||||| ||||||||| ||||||||||||||||||| ||||| ||||     
T  14235567 ttttggtccttttagtttgaaataatttttaagttagtcctttaagttctaaaagttttaattaggtccttttagtttgacagaattctcaagttagtcc 14235666  T
Q  216 tttaagtttcaaatgtttcaaata 239  Q
    |||  |||||| | ||||||||||    
T  14235667 ttt--gtttcacaagtttcaaata 14235688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 32459426 - 32459502
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 192  Q
    |||| ||||||||||||||||| || || ||| |||||  |||||||||| ||||||| || |||||||||||||||    
T  32459426 ttttggtccttttagtttgacaaaattcacaagttagtcatttaagtttcaaaagttttaaataggtcattttagtt 32459502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 243
Target Start/End: Original strand, 6336146 - 6336209
Alignment:
Q  180 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc 243  Q
    |||| |||||||||| ||||||| |||||| |||| ||||||||||||| |||| |||||||||    
T  6336146 ggtccttttagtttggcagaatttccaagttagtcctttaagtttcaaaagttttaaataggtc 6336209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 192
Target Start/End: Complemental strand, 36418460 - 36418389
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 192  Q
    |||||||||||||||||||| |  ||| |||||  |||||||||| |||||||||| |||||| ||||||||    
T  36418460 gtccttttagtttgacataattttcaagttagtcctttaagtttcaaaagtttcaaataggtccttttagtt 36418389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 203
Target Start/End: Original strand, 18951368 - 18951449
Alignment:
Q  122 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattc 203  Q
    |||||||||||||| | || || ||| |||||  |||||||||  ||||||| || |||||||||||||||||| |||||||    
T  18951368 tccttttagtttgatagaattctcaagttagtcctttaagttttaaaagttttaaataggtcattttagtttgatagaattc 18951449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 274
Target Start/End: Original strand, 19278710 - 19278862
Alignment:
Q  122 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 221  Q
    |||||||||||||||| || ||  || |||||  ||||| |||| ||| ||| |||||| |  ||||||||||||||||||| ||||| |    ||||||    
T  19278710 tccttttagtttgacagaattcttaagttagtcctttaaatttcaaaatttt-aattagcttcttttagtttgacagaattctcaagttacctctttaag 19278808  T
Q  222 tttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttaccc 274  Q
    ||||||   |||||||||  || ||||| ||||||||||||||||| |||||||    
T  19278809 tttcaataatttcaaataaatcattttagttgataaactatttcactgttaccc 19278862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 273
Target Start/End: Complemental strand, 32459911 - 32459822
Alignment:
Q  185 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacc 273  Q
    |||| ||||||| |||||| ||| | |||| ||||||||| |||  |||||||||||| |||||| | ||||||||||||||| ||||||    
T  32459911 ttttcgtttgaccgaattctcaaattagtcttttaagttttaaaaatttcaaataggtccttttagtcgataaactatttcactgttacc 32459822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 282
Target Start/End: Complemental strand, 1723044 - 1722933
Alignment:
Q  172 ttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgtt 270  Q
    ||||||||  || ||||||||| ||| |||| | |||| |||  ||||||||| ||| |||| |||||  || ||||| ||||||||||||||||| |||    
T  1723044 ttcaattaaatccttttagtttaacaaaatttctaagttagtgttttaagttttaaaagttttaaatatatcattttagttgataaactatttcactgtt 1722945  T
Q  271 acccctgatgtc 282  Q
    ||||||| ||||    
T  1722944 acccctgctgtc 1722933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 26275512 - 26275567
Alignment:
Q  185 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaatag 240  Q
    |||||||||||||||||| | |||| |||  ||||||||||||| |||||||||||    
T  26275512 ttttagtttgacagaatttctaagttagttctttaagtttcaaaagtttcaaatag 26275567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 26276055 - 26275971
Alignment:
Q  185 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtcttttaattgataaactatttcaccgttacccctg 277  Q
    ||||||||||||| |||| |||||| |||| |||||||||||||| | ||        |||||| ||||||| ||||||||||||||||||||    
T  26276055 ttttagtttgacaaaatttccaagttagtcctttaagtttcaaatatgtc--------cttttagttgataagctatttcaccgttacccctg 26275971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 125 - 192
Target Start/End: Original strand, 30737808 - 30737875
Alignment:
Q  125 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 192  Q
    |||||||||||||||| || ||| ||||| ||||||||||| ||||||| || || ||||||| ||||    
T  30737808 ttttagtttgacataattctcaaattagtcttttaagtttcaaaagttttaaataagtcatttaagtt 30737875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 243
Target Start/End: Complemental strand, 36418521 - 36418458
Alignment:
Q  180 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc 243  Q
    |||| ||||||||||||| ||||| ||||| |||| |||| |||||||| ||||||| ||||||    
T  36418521 ggtctttttagtttgacataattctcaagttagtcctttacgtttcaaaagtttcaattaggtc 36418458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 236
Target Start/End: Complemental strand, 38405651 - 38405600
Alignment:
Q  185 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaa 236  Q
    ||||||||| ||||||||||||||| | ||||||||||||| || |||||||    
T  38405651 ttttagtttcacagaattcccaagttaatcatttaagtttcgaaagtttcaa 38405600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 274
Target Start/End: Original strand, 18237920 - 18238010
Alignment:
Q  185 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttaccc 274  Q
    ||||||||||||||||||   |||| | || ||||||||| ||| |||| ||||| || |||||| |||||||| |||||||| |||||||    
T  18237920 ttttagtttgacagaatttttaagttaatcctttaagttttaaaagttttaaataagtccttttagttgataaaatatttcactgttaccc 18238010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 31813948 - 31813894
Alignment:
Q  185 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaata 239  Q
    ||||||||||||||||||| |||||  ||||||| | ||||||| ||||||||||    
T  31813948 ttttagtttgacagaattctcaagtatgtcattttaatttcaaaagtttcaaata 31813894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 4e-38; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 100 - 282
Target Start/End: Complemental strand, 31247786 - 31247602
Alignment:
Q  100 tttaggtcaaaaatca-ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacag 198  Q
    |||||| |||| |||| |||| ||||||||| ||||||| || | |||| |||||  |||||||||||||||||||||||||||| |||||||| |||||    
T  31247786 tttaggccaaatatcacttttggtccttttaatttgacagaatttccaagttagtcctttaagtttcgaaagtttcaattaggtccttttagttggacag 31247687  T
Q  199 aattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 282  Q
    ||||||||||| |||  ||||||||||||| |||||||||| ||| ||||| |||||||| ||||||||  ||||||||| ||||    
T  31247686 aattcccaagttagtgctttaagtttcaaaagtttcaaatatgtcattttagttgataaattatttcactattacccctgttgtc 31247602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 4276174 - 4276301
Alignment:
Q  156 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgat 254  Q
    ||||||||| |||||||||||||| ||| ||||||||||||| ||||   | || |||  ||||||||||||| ||||||||||| || ||||| |||||    
T  4276174 tttaagttttgaaagtttcaattaagtctttttagtttgacataatttttatgttagttctttaagtttcaaaagtttcaaatagttcattttagttgat 4276273  T
Q  255 aaactatttcaccgttacccctgatgtc 282  Q
    |||||||||||| |||||||||| ||||    
T  4276274 aaactatttcactgttacccctgctgtc 4276301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 121 - 204
Target Start/End: Complemental strand, 21377119 - 21377036
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcc 204  Q
    ||||||||||||||||| || | |||| ||| || ||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  21377119 gtccttttagtttgacagaatttccaagttaatactttaaatttcgaaagtttcaattaggtcattttagtttgacataattcc 21377036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 155 - 277
Target Start/End: Original strand, 35555565 - 35555688
Alignment:
Q  155 ttttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattga 253  Q
    ||||||||||| |||||||||||||  |||||||||||||||||||||  ||||| ||||  |||| |||  || ||||||||||  || ||||| ||||    
T  35555565 ttttaagtttcaaaagtttcaattaaatcattttagtttgacagaattatcaagttagtccattaaattttgaaagtttcaaataaatcattttagttga 35555664  T
Q  254 taaactatttcaccgttacccctg 277  Q
    |||||||||||||||||| |||||    
T  35555665 taaactatttcaccgttatccctg 35555688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 102 - 203
Target Start/End: Original strand, 50530230 - 50530332
Alignment:
Q  102 taggtcaaaaatcattttag-tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaa 200  Q
    ||||||||| |||||||| | |||||||||||||||| || |  ||| ||||| ||||||||||| ||||| | ||||||||||||||||||||||||||    
T  50530230 taggtcaaatatcatttttgatccttttagtttgacagaattttcaacttagtcttttaagtttcaaaagtattaattaggtcattttagtttgacagaa 50530329  T
Q  201 ttc 203  Q
    |||    
T  50530330 ttc 50530332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 229
Target Start/End: Complemental strand, 4276689 - 4276628
Alignment:
Q  168 aagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaat 229  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||    
T  4276689 aagtttcaattagatcattttagtttgacagaattcccaagttagtcctttaagtttcaaat 4276628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 116 - 276
Target Start/End: Complemental strand, 3088218 - 3088066
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||| ||||||||||||||||| || |  ||| ||| |  ||||| |||||||||||||||||| ||| |||||||||||||  ||| || ||| ||||     
T  3088218 ttttggtccttttagtttgacagaattttcaagttaatgctttaaatttcgaaagtttcaattatgtccttttagtttgacatgatttcctagttagtcc 3088119  T
Q  216 tttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccct 276  Q
    ||||||||||         |||||||| ||||||||||||||||||||||||||||| ||||    
T  3088118 tttaagtttc---------aaataggtccttttaattgataaactatttcaccgttatccct 3088066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 282
Target Start/End: Original strand, 21376565 - 21376732
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||||||||||||| ||||||  ||||   || ||||  |||||| |||  ||||||| ||||| ||  ||||||||||| ||||||  || ||  |||     
T  21376565 ttttagtccttttaatttgactgaacttttaagttagacttttaaattttaaaagttttaattaagttcttttagtttgatagaattttcaggttggtcc 21376664  T
Q  216 tttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 282  Q
    ||||||||||||| |||| ||||| ||| ||||| |||||||||||||||||||||||| ||| ||||    
T  21376665 tttaagtttcaaaagttttaaatatgtcattttagttgataaactatttcaccgttaccactgctgtc 21376732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 224
Target Start/End: Original strand, 14964648 - 14964749
Alignment:
Q  122 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 221  Q
    |||||||||||| || ||| |||||| ||||| ||| |||||| |||||||||||||| ||| ||||||||||||||||||| ||| | |||| ||| ||    
T  14964648 tccttttagtttaacttaattcccaagttagtcttt-aagttttgaaagtttcaattatgtctttttagtttgacagaattctcaaataagtccttttag 14964746  T
Q  222 ttt 224  Q
    |||    
T  14964747 ttt 14964749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 185 - 272
Target Start/End: Original strand, 19153885 - 19153974
Alignment:
Q  185 ttttagtttgacagaattcc-caagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttac 272  Q
    ||||||||||||||||||   ||||| ||| ||||||||||||||||||||||||| ||| ||||| |||||||| |||||||| |||||    
T  19153885 ttttagtttgacagaatttgtcaagttagttatttaagtttcaaatgtttcaaatatgtctttttagttgataaattatttcactgttac 19153974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 185 - 269
Target Start/End: Original strand, 54456679 - 54456764
Alignment:
Q  185 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgt 269  Q
    |||||||||||||||||| | || | ||||||||||||||| || |||||||||| ||| ||||| ||||||||||| ||||||||    
T  54456679 ttttagtttgacagaatttcgaaattagtcatttaagtttcgaaagtttcaaatatgtcattttagttgataaactaattcaccgt 54456764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 124 - 237
Target Start/End: Complemental strand, 54456912 - 54456799
Alignment:
Q  124 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtt 223  Q
    |||||||||||| | |||| |||| ||| |   |||||| || |||||||||| |||||| ||||| ||||||| |||| |||||| |||| ||||||||    
T  54456912 cttttagtttgatagaacttccaaattattcccttaagtatcaaaagtttcaaataggtccttttaatttgacataatttccaagttagtcctttaagtt 54456813  T
Q  224 tcaaatgtttcaaa 237  Q
    ||||| ||||||||    
T  54456812 tcaaaagtttcaaa 54456799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 192
Target Start/End: Original strand, 54456651 - 54456746
Alignment:
Q  98 attttaggtcaaaaatcattttag-tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 192  Q
    |||| |||||||| |||||||| | |||||||||||||||| || | | || |||||  ||||||||||||||||||||| || ||||||||||||    
T  54456651 atttaaggtcaaatatcatttttgatccttttagtttgacagaatttcgaaattagtcatttaagtttcgaaagtttcaaatatgtcattttagtt 54456746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 282
Target Start/End: Original strand, 31247195 - 31247292
Alignment:
Q  185 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctgatgtc 282  Q
    ||||||||||||| ||||| ||||| |||| ||||||||||||| |||||||||| || || ||| |||||||||||||| || ||||| |||| ||||    
T  31247195 ttttagtttgacaaaattctcaagttagtc-tttaagtttcaaaagtttcaaataagtcctattagttgataaactattttactgttactcctgctgtc 31247292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 282
Target Start/End: Original strand, 14629288 - 14629382
Alignment:
Q  180 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaatagg-tcttttaattgataaactatttcaccgttacccctga 278  Q
    |||| ||||| ||||||||||||||||||| |||| |||||         |||||||||||| ||||||| |||||||| |||||||||||||||||||     
T  14629288 ggtccttttactttgacagaattcccaagttagtcctttaa---------gtttcaaataggttcttttagttgataaattatttcaccgttacccctgt 14629378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 273
Target Start/End: Complemental strand, 21410355 - 21410273
Alignment:
Q  192 ttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaa-taggtc-ttttaattgataaactatttcaccgttacc 273  Q
    ||||||||||||| |||||| |||||||||||||||| |||| ||| || ||| ||||| ||||||||||||||||| ||||||    
T  21410355 ttgacagaattcc-aagtcaatcatttaagtttcaaaagttttaaattatgtcattttagttgataaactatttcactgttacc 21410273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 24707475 - 24707558
Alignment:
Q  185 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcacc 267  Q
    ||||||||| |||||||| |||||| |||| |||||||||  || |||| |||||  || ||||| ||||||||||||||||||    
T  24707475 ttttagttttacagaatttccaagttagtcctttaagttttcaaagttttaaatatatcattttagttgataaactatttcacc 24707558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 240
Target Start/End: Complemental strand, 5505822 - 5505741
Alignment:
Q  160 agtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagt-catttaagtttcaaatgtttcaaatag 240  Q
    ||||||||||||||||||||| || |||| |||||||| |||| | || | ||| | ||||||||||||| |||| ||||||    
T  5505822 agtttcgaaagtttcaattagatcctttttgtttgacataatttcaaaattagtccttttaagtttcaaaagttttaaatag 5505741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 5505800 - 5505692
Alignment:
Q  122 tccttttagtttgacataactcccaatttagta-ttttaagtttcgaaagtttcaattaggtcattttag-tttgacagaattcccaagtcagtcattta 219  Q
    ||||||| ||||||||||| | | || |||||  ||||||||||| ||||||| || ||| || |||||| ||| |||||||| | |||| |||| ||||    
T  5505800 tcctttttgtttgacataatttcaaaattagtccttttaagtttcaaaagttttaaatagatccttttagttttaacagaatttctaagttagtccttta 5505701  T
Q  220 agtttcaaa 228  Q
    |||||||||    
T  5505700 agtttcaaa 5505692  T

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Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 251
Target Start/End: Complemental strand, 54456940 - 54456844
Alignment:
Q  156 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaatt 251  Q
    ||||||||| ||||| ||||||||| |  ||||||||||| |||| | |||| | | ||  |||||| ||||| ||||||||||||| |||||||||    
T  54456940 tttaagtttagaaagcttcaattagattcttttagtttgatagaacttccaaattattcccttaagtatcaaaagtttcaaataggtccttttaatt 54456844  T

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Target: scaffold0070 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 121 - 277
Target Start/End: Original strand, 28548 - 28705
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 220  Q
    ||||||||| ||||||| || | |||| |||||  ||||||||| |||||||||||||||||| ||||| ||||||||||||| ||||| |||| |||||    
T  28548 gtccttttaatttgacagaatttccaagttagtcctttaagttttgaaagtttcaattaggtccttttaatttgacagaattctcaagttagtcctttaa 28647  T
Q  221 gtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctg 277  Q
      |||||| |||||||||||||| ||||| ||||||||||||||||| ||||||||||    
T  28648 aattcaaaagtttcaaataggtcattttagttgataaactatttcactgttacccctg 28705  T

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Target: scaffold0070; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 251
Target Start/End: Original strand, 28547 - 28619
Alignment:
Q  180 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaatt 251  Q
    |||| ||||| |||||||||||| |||||| |||| |||||||||  || ||||||| ||||| |||||||||    
T  28547 ggtccttttaatttgacagaatttccaagttagtcctttaagttttgaaagtttcaattaggtccttttaatt 28619  T

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Target: scaffold0019 (Bit Score: 76; Significance: 4e-35; HSPs: 4)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 116 - 247
Target Start/End: Complemental strand, 124482 - 124351
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||| |||||||| |||||| |||| |||||| |||||  |||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||     
T  124482 ttttggtcctttttgtttgatataattcccaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaatttccaagttagtcc 124383  T
Q  216 tttaagtttcaaatgtttcaaataggtctttt 247  Q
    |||||||||| || ||||||| ||||||||||    
T  124382 tttaagtttcgaaagtttcaattaggtctttt 124351  T

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Target: scaffold0019; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 121 - 209
Target Start/End: Complemental strand, 124417 - 124329
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagt 209  Q
    ||||||||||||||||| || | |||| |||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  124417 gtccttttagtttgacagaatttccaagttagtcctttaagtttcgaaagtttcaattaggtctttttagtttgacagaattcccaagt 124329  T

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Target: scaffold0019; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 116 - 237
Target Start/End: Original strand, 124142 - 124262
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 215  Q
    |||| ||||||||||||||||| || |||||| |||||  |||||||||| ||||||||||  ||||  ||||||||||||||||||||||| | ||||     
T  124142 ttttggtccttttagtttgacaaaattcccaagttagtcctttaagtttcaaaagtttcaaacaggtgcttttagtttgacagaattcccaatttagtc- 124240  T
Q  216 tttaagtttcaaatgtttcaaa 237  Q
    ||||||||||||| ||||||||    
T  124241 tttaagtttcaaaagtttcaaa 124262  T

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Target: scaffold0019; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 242
Target Start/End: Original strand, 124146 - 124208
Alignment:
Q  180 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt 242  Q
    |||| ||||||||||||| ||||||||||| |||| ||||||||||||| |||||||| ||||    
T  124146 ggtccttttagtttgacaaaattcccaagttagtcctttaagtttcaaaagtttcaaacaggt 124208  T

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Target: scaffold0746 (Bit Score: 75; Significance: 1e-34; HSPs: 3)
Name: scaffold0746
Description:

Target: scaffold0746; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 277
Target Start/End: Complemental strand, 620 - 498
Alignment:
Q  156 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgat 254  Q
    ||||||||| |||||||||||||||||| ||||| ||||||||||||| ||||| |||| ||||| ||||||| |||||||||||||| ||||| |||||    
T  620 tttaagttttgaaagtttcaattaggtccttttaatttgacagaattctcaagttagtcctttaaatttcaaaagtttcaaataggtcattttagttgat 521  T
Q  255 aaactatttcaccgttacccctg 277  Q
    |||||||||||| ||||||||||    
T  520 aaactatttcactgttacccctg 498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0746; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 121 - 282
Target Start/End: Original strand, 25 - 186
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 220  Q
    |||||||||||||||||||| || ||| |||||  || ||||||| ||||||| || ||  || |||||||||||| ||||||| |||| ||| ||||||    
T  25 gtccttttagtttgacataattctcaagttagtccttcaagtttcaaaagttttaaatatatccttttagtttgaccgaattcctaagttagt-atttaa 123  T
Q  221 gtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 282  Q
    |||| ||| |||||||||| ||| ||||| ||||||||||||||||| ||||| |||| ||||    
T  124 gtttgaaaagtttcaaatatgtcattttagttgataaactatttcactgttactcctgttgtc 186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0746; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 192
Target Start/End: Complemental strand, 595 - 524
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 192  Q
    ||||||||| ||||||| || || ||| |||||  ||||| |||| |||||||||| |||||||||||||||    
T  595 gtccttttaatttgacagaattctcaagttagtcctttaaatttcaaaagtttcaaataggtcattttagtt 524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 62; Significance: 8e-27; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 103 - 240
Target Start/End: Complemental strand, 45341 - 45204
Alignment:
Q  103 aggtcaaaaatcattttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaatt 202  Q
    |||||||| | || ||| |||||||| ||||||||||| || ||| ||||| ||||||||||  ||||||||||||||||| ||||||||||||| ||||    
T  45341 aggtcaaataccactttggtccttttggtttgacataattctcaagttagtcttttaagttttaaaagtttcaattaggtccttttagtttgacataatt 45242  T
Q  203 cccaagtcagtcatttaagtttcaaatgtttcaaatag 240  Q
      ||| | |||||||||||||| ||| |||||||||||    
T  45241 ttcaaattagtcatttaagttttaaaagtttcaaatag 45204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 45263 - 45181
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattc 203  Q
    |||||||||||||||||||| |  ||| |||||  |||||||||  |||||||||| ||| || ||||| |||||||||||||    
T  45263 gtccttttagtttgacataattttcaaattagtcatttaagttttaaaagtttcaaatagatccttttaatttgacagaattc 45181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 101 - 277
Target Start/End: Original strand, 9377 - 9546
Alignment:
Q  101 ttaggtcaaaaatcatttta-gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacaga 199  Q
    |||||||||| ||||||||  ||||||||||||||||| || ||  || |||||  ||||||||||| |||||||||||||||| ||||||||| | |||    
T  9377 ttaggtcaaatatcatttttcgtccttttagtttgacagaattcttaagttagtcatttaagtttcggaagtttcaattaggtccttttagtttaataga 9476  T
Q  200 attcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctg 277  Q
    |||| ||||| |||  |||||         ||||||||||||| |||||| ||||||||||||||||| ||||||||||    
T  9477 attctcaagttagttctttaa---------gtttcaaataggtccttttagttgataaactatttcactgttacccctg 9546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 121 - 223
Target Start/End: Complemental strand, 9993 - 9891
Alignment:
Q  121 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 220  Q
    ||||||||||||||||| || || ||| |||||  ||||||||||||||||||||||||| || ||||||||||||| ||||||||||| |||| ||| |    
T  9993 gtccttttagtttgacagaattctcaagttagttctttaagtttcgaaagtttcaattagttccttttagtttgacataattcccaagttagtcctttta 9894  T
Q  221 gtt 223  Q
    |||    
T  9893 gtt 9891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374 (Bit Score: 47; Significance: 7e-18; HSPs: 3)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 180 - 277
Target Start/End: Original strand, 16176 - 16274
Alignment:
Q  180 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctg 277  Q
    |||| ||||||||||| | |||| |||| | |||| ||||||||| ||| |||| ||||||||| ||||| ||||||||||||||||||||||||||||    
T  16176 ggtccttttagtttgataaaatttccaaattagtcctttaagtttaaaaagttttaaataggtcattttagttgataaactatttcaccgttacccctg 16274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 282
Target Start/End: Complemental strand, 16663 - 16565
Alignment:
Q  185 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 282  Q
    |||| |||||| | |||| |||||| | || ||||||||| ||| |||| ||||| ||| ||||| ||||||||||||||||| |||| ||||| ||||    
T  16663 tttttgtttgataaaatttccaagttaatcctttaagtttaaaaagttttaaataagtcattttagttgataaactatttcacagttatccctgttgtc 16565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 16172 - 16248
Alignment:
Q  116 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 192  Q
    |||| ||||||||||||||| | || | |||| |||||  |||||||||  ||||||| || |||||||||||||||    
T  16172 ttttggtccttttagtttgataaaatttccaaattagtcctttaagtttaaaaagttttaaataggtcattttagtt 16248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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