View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8593_high_10 (Length: 251)
Name: NF8593_high_10
Description: NF8593
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8593_high_10 |
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Alignment Details
Target: chr8 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 13 - 240
Target Start/End: Original strand, 42335884 - 42336111
Alignment:
| Q |
13 |
ccagttgggattcttcctttgagtcaagcaagcacaagagtgcgtataaggaatatttcagtttatgtatgttgagttggtaagagttaatacacaaatt |
112 |
Q |
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| T |
42335884 |
ccagttgggattcttcctttgagtcaatcaagcacaagagtgtgtataaggaatatttcagtttatgtatgttgagttggtaagagttaatacacaaatt |
42335983 |
T |
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| Q |
113 |
atggttgaggttgaataataatgaagatggtgatagtaacggcaatatagtaaggaattgaagtttgtttactttggtcaaacatagagctgagtttgtg |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42335984 |
atggttgaggttgaataataatgaagatggtgatagtaacggcaatatagtaaggaattgaagtttgtttactttggtcaaacatagagctgagtttgtg |
42336083 |
T |
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| Q |
213 |
ctttgagtagtggtctttggcatctctg |
240 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
42336084 |
ctttgagtagtggtctttggcatctctg |
42336111 |
T |
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