View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8601_low_24 (Length: 349)

Name: NF8601_low_24
Description: NF8601
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8601_low_24
NF8601_low_24
[»] chr3 (43 HSPs)
chr3 (17-346)||(12501708-12502037)
chr3 (8-349)||(11861125-11861466)
chr3 (17-348)||(16803973-16804304)
chr3 (17-348)||(15065844-15066175)
chr3 (17-348)||(23414816-23415147)
chr3 (17-348)||(16694937-16695268)
chr3 (17-349)||(23079043-23079375)
chr3 (17-264)||(14873611-14873858)
chr3 (17-203)||(17497609-17497795)
chr3 (50-349)||(24185962-24186258)
chr3 (17-349)||(10008372-10008701)
chr3 (17-349)||(10908982-10909311)
chr3 (17-349)||(20059083-20059412)
chr3 (17-349)||(43165447-43165776)
chr3 (17-349)||(3688715-3689044)
chr3 (17-349)||(6603507-6603836)
chr3 (17-349)||(12889481-12889810)
chr3 (17-349)||(15345274-15345603)
chr3 (17-349)||(48428219-48428548)
chr3 (17-349)||(15713085-15713414)
chr3 (17-349)||(16638545-16638874)
chr3 (17-349)||(53382048-53382376)
chr3 (50-349)||(15399580-15399875)
chr3 (17-349)||(13255462-13255791)
chr3 (17-349)||(16753730-16754059)
chr3 (17-349)||(26790442-26790771)
chr3 (17-349)||(5421959-5422288)
chr3 (17-349)||(15586421-15586750)
chr3 (17-335)||(12843129-12843447)
chr3 (17-240)||(5110438-5110658)
chr3 (17-291)||(14578447-14578721)
chr3 (306-347)||(14873883-14873924)
chr3 (170-323)||(16384540-16384693)
chr3 (215-335)||(2037125-2037245)
chr3 (215-335)||(2040866-2040986)
chr3 (17-195)||(6596981-6597156)
chr3 (215-335)||(14039542-14039662)
chr3 (50-143)||(15359027-15359120)
chr3 (263-335)||(19040001-19040073)
chr3 (169-349)||(19727532-19727712)
chr3 (252-307)||(15230427-15230482)
chr3 (252-307)||(15236295-15236350)
chr3 (215-335)||(35982977-35983097)
[»] chr2 (33 HSPs)
chr2 (17-349)||(24704809-24705141)
chr2 (7-348)||(24656975-24657316)
chr2 (17-349)||(23028789-23029120)
chr2 (17-349)||(24678271-24678603)
chr2 (17-347)||(22462808-22463138)
chr2 (17-349)||(22742293-22742625)
chr2 (17-349)||(23105054-23105387)
chr2 (137-349)||(11351158-11351370)
chr2 (16-349)||(23116385-23116718)
chr2 (17-349)||(22733101-22733433)
chr2 (93-348)||(23205099-23205354)
chr2 (93-348)||(23676703-23676958)
chr2 (17-342)||(23039904-23040229)
chr2 (17-304)||(21320330-21320617)
chr2 (95-349)||(23065197-23065451)
chr2 (95-349)||(23074647-23074901)
chr2 (17-349)||(10871634-10871963)
chr2 (59-349)||(24874122-24874409)
chr2 (17-349)||(9338366-9338695)
chr2 (17-349)||(9487000-9487329)
chr2 (17-349)||(22322672-22323001)
chr2 (17-349)||(24265154-24265483)
chr2 (50-349)||(24712818-24713114)
chr2 (17-349)||(17001784-17002113)
chr2 (17-157)||(20320956-20321096)
chr2 (17-349)||(16984024-16984353)
chr2 (17-348)||(44382900-44383228)
chr2 (101-349)||(21139395-21139640)
chr2 (59-349)||(27374053-27374340)
chr2 (252-335)||(28350673-28350756)
chr2 (17-75)||(23029819-23029877)
chr2 (170-323)||(12577163-12577316)
chr2 (252-292)||(21901378-21901418)
[»] chr6 (32 HSPs)
chr6 (7-348)||(27558891-27559232)
chr6 (16-348)||(25756546-25756878)
chr6 (17-349)||(22436886-22437218)
chr6 (7-220)||(21764958-21765171)
chr6 (13-349)||(5836159-5836492)
chr6 (88-349)||(18404947-18405208)
chr6 (17-349)||(27205639-27205968)
chr6 (17-349)||(27243260-27243589)
chr6 (17-349)||(24292717-24293046)
chr6 (17-153)||(19867869-19868005)
chr6 (50-349)||(25115569-25115865)
chr6 (50-349)||(22829354-22829650)
chr6 (17-349)||(29589374-29589703)
chr6 (212-349)||(19867704-19867841)
chr6 (17-349)||(2871737-2872066)
chr6 (17-349)||(28312647-28312976)
chr6 (215-323)||(21474643-21474751)
chr6 (17-349)||(16574907-16575236)
chr6 (17-349)||(16620144-16620473)
chr6 (215-323)||(25770887-25770995)
chr6 (169-349)||(23081440-23081620)
chr6 (260-335)||(19486469-19486544)
chr6 (263-349)||(23085003-23085089)
chr6 (49-349)||(28260164-28260461)
chr6 (49-349)||(28285455-28285752)
chr6 (49-349)||(28338913-28339210)
chr6 (170-335)||(16813671-16813836)
chr6 (14-99)||(21566920-21567005)
chr6 (50-109)||(24515379-24515438)
chr6 (257-318)||(18325908-18325969)
chr6 (50-99)||(34642550-34642599)
chr6 (170-323)||(34642671-34642824)
[»] scaffold0017 (4 HSPs)
scaffold0017 (7-348)||(16846-17187)
scaffold0017 (21-157)||(194662-194798)
scaffold0017 (7-64)||(21368-21425)
scaffold0017 (275-349)||(194886-194960)
[»] scaffold0079 (1 HSPs)
scaffold0079 (7-349)||(36680-37022)
[»] scaffold0181 (1 HSPs)
scaffold0181 (7-348)||(28708-29049)
[»] scaffold0305 (1 HSPs)
scaffold0305 (7-348)||(3047-3388)
[»] chr5 (31 HSPs)
chr5 (7-349)||(23461056-23461398)
chr5 (17-349)||(20803682-20804014)
chr5 (17-349)||(23526136-23526468)
chr5 (21-348)||(18782200-18782527)
chr5 (17-349)||(21882859-21883192)
chr5 (17-349)||(25429506-25429837)
chr5 (17-143)||(23537184-23537310)
chr5 (17-349)||(19773045-19773374)
chr5 (17-349)||(37288468-37288797)
chr5 (17-349)||(41773927-41774256)
chr5 (50-349)||(22137753-22138049)
chr5 (17-349)||(16359587-16359916)
chr5 (17-349)||(22329859-22330188)
chr5 (17-349)||(27521491-27521820)
chr5 (17-349)||(27613441-27613770)
chr5 (17-349)||(34569579-34569908)
chr5 (50-349)||(14996744-14997040)
chr5 (17-349)||(27682372-27682701)
chr5 (17-349)||(29473045-29473374)
chr5 (17-349)||(40711865-40712194)
chr5 (50-349)||(22351004-22351300)
chr5 (168-349)||(27665610-27665791)
chr5 (215-335)||(16258203-16258323)
chr5 (260-335)||(21983389-21983464)
chr5 (252-335)||(22591959-22592042)
chr5 (252-335)||(22595514-22595597)
chr5 (170-323)||(17266456-17266609)
chr5 (263-335)||(21631614-21631686)
chr5 (14-105)||(21631365-21631456)
chr5 (170-335)||(23669713-23669878)
chr5 (252-292)||(43122591-43122631)
[»] chr7 (26 HSPs)
chr7 (17-348)||(11984135-11984466)
chr7 (16-348)||(9591507-9591839)
chr7 (16-347)||(17703250-17703581)
chr7 (16-347)||(16726236-16726567)
chr7 (17-349)||(18180885-18181214)
chr7 (17-349)||(15157856-15158185)
chr7 (50-349)||(12690643-12690939)
chr7 (63-347)||(14957652-14957933)
chr7 (50-349)||(11549934-11550230)
chr7 (17-349)||(13689183-13689512)
chr7 (17-349)||(11234012-11234341)
chr7 (17-349)||(44788150-44788479)
chr7 (17-349)||(8710747-8711076)
chr7 (18-188)||(15145720-15145890)
chr7 (17-349)||(14335538-14335867)
chr7 (17-349)||(18586970-18587299)
chr7 (17-243)||(10873709-10873932)
chr7 (170-309)||(14283301-14283440)
chr7 (17-114)||(14043072-14043169)
chr7 (17-114)||(14353102-14353199)
chr7 (260-335)||(15627680-15627755)
chr7 (14-105)||(15627910-15628001)
chr7 (228-335)||(19150168-19150275)
chr7 (228-335)||(20749567-20749674)
chr7 (14-108)||(14283145-14283239)
chr7 (257-335)||(15114358-15114436)
[»] scaffold0451 (1 HSPs)
scaffold0451 (7-348)||(13812-14153)
[»] chr1 (22 HSPs)
chr1 (17-349)||(24784716-24785048)
chr1 (17-349)||(22435602-22435924)
chr1 (17-342)||(21228415-21228740)
chr1 (16-348)||(17041874-17042205)
chr1 (17-349)||(22496115-22496447)
chr1 (17-349)||(20081235-20081567)
chr1 (17-349)||(22401760-22402092)
chr1 (17-203)||(21176681-21176867)
chr1 (23-349)||(41350536-41350859)
chr1 (17-349)||(51330354-51330683)
chr1 (17-349)||(21833470-21833799)
chr1 (17-349)||(16347457-16347786)
chr1 (17-349)||(33387891-33388220)
chr1 (50-349)||(21842380-21842676)
chr1 (50-349)||(19109536-19109834)
chr1 (59-349)||(22400488-22400775)
chr1 (18-349)||(21752215-21752546)
chr1 (272-348)||(21176597-21176673)
chr1 (17-108)||(16379503-16379594)
chr1 (8-112)||(24096465-24096569)
chr1 (263-349)||(16379262-16379348)
chr1 (49-109)||(19857713-19857773)
[»] scaffold0009 (1 HSPs)
scaffold0009 (17-348)||(229642-229973)
[»] scaffold0819 (1 HSPs)
scaffold0819 (17-349)||(296-628)
[»] scaffold0177 (2 HSPs)
scaffold0177 (17-337)||(14831-15151)
scaffold0177 (17-337)||(11146-11466)
[»] scaffold0080 (5 HSPs)
scaffold0080 (17-349)||(32061-32393)
scaffold0080 (16-347)||(10028-10358)
scaffold0080 (16-347)||(12683-13013)
scaffold0080 (17-349)||(54819-55151)
scaffold0080 (167-349)||(37527-37709)
[»] scaffold0412 (1 HSPs)
scaffold0412 (14-349)||(15366-15701)
[»] scaffold0410 (1 HSPs)
scaffold0410 (7-342)||(330-665)
[»] scaffold0550 (1 HSPs)
scaffold0550 (88-349)||(10019-10280)
[»] scaffold1881 (1 HSPs)
scaffold1881 (17-348)||(270-601)
[»] chr4 (29 HSPs)
chr4 (16-349)||(13513503-13513836)
chr4 (16-348)||(18604345-18604677)
chr4 (17-243)||(18224000-18224226)
chr4 (17-202)||(16248203-16248388)
chr4 (7-156)||(16350259-16350408)
chr4 (17-348)||(14300509-14300837)
chr4 (50-349)||(14683720-14684016)
chr4 (17-129)||(15144475-15144587)
chr4 (17-349)||(8050153-8050482)
chr4 (215-348)||(16250575-16250708)
chr4 (182-349)||(15144584-15144751)
chr4 (17-349)||(17091679-17092008)
chr4 (17-349)||(19635289-19635618)
chr4 (17-349)||(8389565-8389894)
chr4 (17-349)||(23958900-23959229)
chr4 (49-349)||(14162623-14162923)
chr4 (17-349)||(12479753-12480082)
chr4 (17-349)||(16233522-16233851)
chr4 (17-349)||(19775323-19775652)
chr4 (17-349)||(27714489-27714818)
chr4 (61-349)||(40476193-40476478)
chr4 (273-348)||(18224229-18224304)
chr4 (18-315)||(8224-8520)
chr4 (18-349)||(15564-15894)
chr4 (215-335)||(13879276-13879396)
chr4 (260-335)||(8708844-8708919)
chr4 (266-349)||(16219341-16219424)
chr4 (266-349)||(16222661-16222744)
chr4 (215-335)||(15073526-15073646)
[»] scaffold2059 (1 HSPs)
scaffold2059 (17-348)||(559-890)
[»] scaffold0289 (1 HSPs)
scaffold0289 (7-318)||(1-312)
[»] scaffold0044 (2 HSPs)
scaffold0044 (17-348)||(17343-17674)
scaffold0044 (17-349)||(3606-3935)
[»] chr8 (25 HSPs)
chr8 (17-348)||(22043047-22043378)
chr8 (17-348)||(15536603-15536934)
chr8 (17-348)||(30310374-30310705)
chr8 (17-349)||(19981186-19981518)
chr8 (16-348)||(32603365-32603697)
chr8 (17-349)||(21163760-21164100)
chr8 (17-349)||(21391091-21391423)
chr8 (17-349)||(21780417-21780749)
chr8 (17-349)||(18880887-18881219)
chr8 (125-348)||(22031323-22031545)
chr8 (23-349)||(19481311-19481634)
chr8 (17-349)||(18859796-18860125)
chr8 (17-349)||(20015496-20015825)
chr8 (17-349)||(17671255-17671584)
chr8 (17-349)||(19115619-19115948)
chr8 (17-349)||(22126192-22126521)
chr8 (17-349)||(22117408-22117737)
chr8 (18-291)||(21671792-21672065)
chr8 (17-349)||(22421123-22421455)
chr8 (214-335)||(22374102-22374223)
chr8 (254-341)||(22523737-22523824)
chr8 (260-335)||(20391319-20391394)
chr8 (13-109)||(21928887-21928983)
chr8 (245-335)||(19985413-19985503)
chr8 (8-113)||(28984366-28984471)
[»] scaffold1459 (2 HSPs)
scaffold1459 (17-243)||(882-1108)
scaffold1459 (300-349)||(1105-1154)
[»] scaffold0010 (1 HSPs)
scaffold0010 (17-348)||(14607-14938)
[»] scaffold0285 (1 HSPs)
scaffold0285 (17-348)||(5181-5512)
[»] scaffold0297 (1 HSPs)
scaffold0297 (17-349)||(7447-7779)
[»] scaffold0273 (1 HSPs)
scaffold0273 (17-349)||(222-554)
[»] scaffold0081 (2 HSPs)
scaffold0081 (17-349)||(21786-22118)
scaffold0081 (17-349)||(37210-37542)
[»] scaffold0023 (3 HSPs)
scaffold0023 (17-349)||(30364-30696)
scaffold0023 (17-346)||(43243-43572)
scaffold0023 (170-271)||(164344-164445)
[»] scaffold0019 (1 HSPs)
scaffold0019 (17-348)||(171301-171632)
[»] scaffold0008 (2 HSPs)
scaffold0008 (17-348)||(33-363)
scaffold0008 (17-243)||(139400-139626)
[»] scaffold0042 (1 HSPs)
scaffold0042 (17-349)||(36610-36942)
[»] scaffold0130 (1 HSPs)
scaffold0130 (16-348)||(7568-7900)
[»] scaffold0120 (2 HSPs)
scaffold0120 (17-349)||(14266-14598)
scaffold0120 (17-349)||(11446-11777)
[»] scaffold1220 (1 HSPs)
scaffold1220 (8-266)||(1-259)
[»] scaffold0029 (3 HSPs)
scaffold0029 (17-248)||(8497-8728)
scaffold0029 (170-323)||(115770-115923)
scaffold0029 (50-135)||(107600-107685)
[»] scaffold0102 (1 HSPs)
scaffold0102 (17-349)||(50135-50467)
[»] scaffold0546 (1 HSPs)
scaffold0546 (11-347)||(63-399)
[»] scaffold0109 (2 HSPs)
scaffold0109 (11-347)||(12908-13244)
scaffold0109 (59-349)||(41337-41624)
[»] scaffold0114 (1 HSPs)
scaffold0114 (21-349)||(17143-17471)
[»] scaffold0490 (1 HSPs)
scaffold0490 (18-349)||(73-404)
[»] scaffold0501 (1 HSPs)
scaffold0501 (19-243)||(212-436)
[»] scaffold0034 (1 HSPs)
scaffold0034 (17-189)||(121966-122138)
[»] scaffold1423 (1 HSPs)
scaffold1423 (17-335)||(168-486)
[»] scaffold0540 (1 HSPs)
scaffold0540 (19-349)||(10672-11002)
[»] scaffold0198 (1 HSPs)
scaffold0198 (19-349)||(30469-30799)
[»] scaffold0403 (2 HSPs)
scaffold0403 (18-349)||(15093-15424)
scaffold0403 (7-107)||(1-101)
[»] scaffold0411 (1 HSPs)
scaffold0411 (18-349)||(8592-8924)
[»] scaffold0084 (1 HSPs)
scaffold0084 (17-349)||(8405-8737)
[»] scaffold0993 (1 HSPs)
scaffold0993 (17-349)||(1164-1496)
[»] scaffold0064 (2 HSPs)
scaffold0064 (17-157)||(66320-66460)
scaffold0064 (171-349)||(69366-69543)
[»] scaffold0324 (1 HSPs)
scaffold0324 (18-349)||(2171-2502)
[»] scaffold0611 (1 HSPs)
scaffold0611 (17-243)||(9233-9459)
[»] scaffold0358 (1 HSPs)
scaffold0358 (18-349)||(9129-9460)
[»] scaffold0319 (1 HSPs)
scaffold0319 (17-149)||(6882-7014)
[»] scaffold0003 (1 HSPs)
scaffold0003 (17-349)||(424490-424822)
[»] scaffold0022 (4 HSPs)
scaffold0022 (17-129)||(34561-34673)
scaffold0022 (182-349)||(34670-34837)
scaffold0022 (17-349)||(41814-42146)
scaffold0022 (17-349)||(75534-75866)
[»] scaffold0028 (3 HSPs)
scaffold0028 (56-349)||(55186-55476)
scaffold0028 (109-349)||(21179-21416)
scaffold0028 (109-349)||(11651-11888)
[»] scaffold0431 (1 HSPs)
scaffold0431 (50-349)||(10550-10846)
[»] scaffold0122 (1 HSPs)
scaffold0122 (18-335)||(40298-40615)
[»] scaffold0207 (1 HSPs)
scaffold0207 (21-321)||(4349-4649)
[»] scaffold0789 (1 HSPs)
scaffold0789 (88-349)||(120-378)
[»] scaffold0278 (1 HSPs)
scaffold0278 (18-349)||(3733-4064)
[»] scaffold0259 (1 HSPs)
scaffold0259 (50-349)||(8440-8736)
[»] scaffold0243 (1 HSPs)
scaffold0243 (17-349)||(23735-24067)
[»] scaffold0309 (2 HSPs)
scaffold0309 (18-117)||(19812-19911)
scaffold0309 (251-335)||(12923-13007)
[»] scaffold0423 (1 HSPs)
scaffold0423 (88-349)||(2124-2385)
[»] scaffold0055 (1 HSPs)
scaffold0055 (59-349)||(22429-22716)
[»] scaffold0052 (1 HSPs)
scaffold0052 (59-349)||(7418-7705)
[»] scaffold0007 (2 HSPs)
scaffold0007 (17-349)||(48847-49176)
scaffold0007 (263-335)||(163041-163113)
[»] scaffold0865 (1 HSPs)
scaffold0865 (215-335)||(1260-1380)
[»] scaffold0621 (2 HSPs)
scaffold0621 (17-341)||(207-531)
scaffold0621 (17-341)||(4624-4948)
[»] scaffold0218 (2 HSPs)
scaffold0218 (21-117)||(24520-24616)
scaffold0218 (215-349)||(24700-24834)
[»] scaffold0133 (1 HSPs)
scaffold0133 (215-335)||(28273-28393)
[»] scaffold0040 (1 HSPs)
scaffold0040 (17-349)||(110697-111029)
[»] scaffold0333 (1 HSPs)
scaffold0333 (62-347)||(18834-19119)
[»] scaffold0075 (2 HSPs)
scaffold0075 (18-315)||(47947-48243)
scaffold0075 (18-349)||(55262-55592)
[»] scaffold0004 (1 HSPs)
scaffold0004 (260-338)||(200510-200588)
[»] scaffold0067 (3 HSPs)
scaffold0067 (170-323)||(64545-64698)
scaffold0067 (170-323)||(49123-49276)
scaffold0067 (170-323)||(58157-58310)
[»] scaffold0192 (1 HSPs)
scaffold0192 (215-335)||(29723-29843)
[»] scaffold0077 (1 HSPs)
scaffold0077 (254-349)||(57641-57736)
[»] scaffold0357 (1 HSPs)
scaffold0357 (59-325)||(17809-18075)
[»] scaffold0476 (1 HSPs)
scaffold0476 (90-335)||(10982-11226)
[»] scaffold0020 (2 HSPs)
scaffold0020 (215-323)||(176195-176303)
scaffold0020 (49-109)||(98405-98465)
[»] scaffold0509 (1 HSPs)
scaffold0509 (260-335)||(12024-12099)
[»] scaffold0053 (1 HSPs)
scaffold0053 (14-108)||(65109-65203)
[»] scaffold0167 (1 HSPs)
scaffold0167 (56-109)||(5475-5528)
[»] scaffold0609 (1 HSPs)
scaffold0609 (215-335)||(1135-1255)
[»] scaffold0529 (1 HSPs)
scaffold0529 (263-335)||(5284-5356)
[»] scaffold0507 (1 HSPs)
scaffold0507 (17-105)||(11454-11542)
[»] scaffold0165 (1 HSPs)
scaffold0165 (215-335)||(12156-12276)
[»] scaffold0054 (1 HSPs)
scaffold0054 (215-335)||(63507-63627)
[»] scaffold0046 (1 HSPs)
scaffold0046 (215-335)||(70304-70424)
[»] scaffold0342 (1 HSPs)
scaffold0342 (254-349)||(14293-14388)
[»] scaffold0335 (1 HSPs)
scaffold0335 (228-335)||(4305-4412)
[»] scaffold0270 (2 HSPs)
scaffold0270 (254-349)||(7055-7150)
scaffold0270 (254-349)||(14185-14280)
[»] scaffold0235 (2 HSPs)
scaffold0235 (170-273)||(8405-8508)
scaffold0235 (170-273)||(18619-18722)
[»] scaffold0100 (1 HSPs)
scaffold0100 (13-96)||(16395-16478)
[»] scaffold0006 (1 HSPs)
scaffold0006 (18-157)||(104600-104739)
[»] scaffold0001 (1 HSPs)
scaffold0001 (266-341)||(441842-441917)
[»] scaffold0679 (1 HSPs)
scaffold0679 (257-335)||(1053-1131)
[»] scaffold0018 (1 HSPs)
scaffold0018 (263-349)||(23334-23420)
[»] scaffold0012 (1 HSPs)
scaffold0012 (263-349)||(216456-216542)
[»] scaffold0348 (1 HSPs)
scaffold0348 (170-279)||(4792-4901)
[»] scaffold0230 (1 HSPs)
scaffold0230 (257-318)||(18386-18447)
[»] scaffold0751 (1 HSPs)
scaffold0751 (251-335)||(5377-5461)
[»] scaffold0523 (1 HSPs)
scaffold0523 (251-335)||(5636-5720)
[»] scaffold0188 (1 HSPs)
scaffold0188 (8-112)||(33153-33257)
[»] scaffold0104 (1 HSPs)
scaffold0104 (251-335)||(43443-43527)


Alignment Details
Target: chr3 (Bit Score: 254; Significance: 1e-141; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 17 - 346
Target Start/End: Complemental strand, 12502037 - 12501708
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||||||||||||||||||||||||| |||| ||||||||  ||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||    
T  12502037 gctcattacaaggttgtgaatgagcggaagaccaagggccagtagagtcgccctaagccctatagtgcccctgctgataagggaaaacagaggatggtcg 12501938  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||| |||||    
T  12501937 aggaaagacggcctaagaagaaggatgttcctgctgagattacctgtttcaattgtggcgagaaaggccacaagagcaatgtttgtcctgaggaggtaaa 12501838  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||||  |||||||||||    
T  12501837 gaaatgtttccggtgtggcaagaagggtcacacattagctgattgcaagcatggtgatattgtgtgtttcaattgcaaggaagagggaaatattggttct 12501738  T
Q  317 cagtgcaagcagcctaagagggcgccgact 346  Q
    |||||||||||||| |||||||||||||||    
T  12501737 cagtgcaagcagccgaagagggcgccgact 12501708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 8 - 349
Target Start/End: Complemental strand, 11861466 - 11861125
Alignment:
Q  8 gacatcaaagctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacaga 107  Q
    |||| ||| |||||||||||||||||||||||| || ||| ||||||||| ||||||| |||||||||||||||||| | ||||||||| ||||||||||    
T  11861466 gacaccaaggctcattacaaggttgtgaatgagtggaagagtaagggccaccagagtcaccctaagccctatagtgcccctgctgataaaggcaaacaga 11861367  T
Q  108 ggatggtcgaggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttga 207  Q
    | |||||||| || || ||||||||||| ||||||| |||||| ||||||  ||||||||||||||| |||||||||||||| |||||||||||||  ||    
T  11861366 gaatggtcgatgataggcggcctaagaagaaggatgctcctgcggagattgtctatttcaattgtggtgagaaaggccacaagagcaatgtttgtccaga 11861267  T
Q  208 ggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcat 307  Q
    ||| || |||||||||||| ||||||| |||||||| || |  |||||||||||||||||| |||||||||||||||||||||  |||||||||||||||    
T  11861266 ggaggtgaagaaatgtttctggtgtggtaagaagggtcatactttagctgattgcaagcatagtgatattgtgtgcttcaattccaaggaagagggtcat 11861167  T
Q  308 attggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  11861166 attggttctcagtgcaagcagcctaagagggcgccgactact 11861125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 17 - 348
Target Start/End: Original strand, 16803973 - 16804304
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||    
T  16803973 gctcattacaaggttgtgaatgagcggaagaccaagggccagcagagtcgccctaagccctatagtgcccctgctgataagggcaaacagagaatggtcg 16804072  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || ||||||||||| ||||||| ||| ||||||||||| | |||||||||||| |||||||||||||| ||||||||||||| ||| ||  | ||    
T  16804073 atgataggcggcctaagaagaaggatgctccagctgagattacttgtttcaattgtggtgagaaaggccacaagagcaatgtttgtcctgaagagatcaa 16804172  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||||||| |||||||||||||||| || || ||  |||||||||||||||    |||||||||||||||||||| ||| ||||||||||||||||||||     
T  16804173 gaaatgtgtccggtgtggcaagaaaggtcatattgtagctgattgcaagcgaaatgatattgtgtgcttcaattttaatgaagagggtcatattggttcc 16804272  T
Q  317 cagtgcaagcagcctaagagggcgccgactac 348  Q
    || |||||||||||||||| | |||| |||||    
T  16804273 caatgcaagcagcctaagaagtcgcctactac 16804304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 17 - 348
Target Start/End: Complemental strand, 15066175 - 15065844
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||| | |||||||||||| ||||||||||||| |||||||||||||||||||||||| | | ||||||||||||||||||||| |||||||    
T  15066175 gctcattacaagatggtgaatgagcggaagactaagggccagcagagtcgccctaagccctatagttcccctgctgataagggcaaacagagaatggtcg 15066076  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || |||||||| | ||| ||||||| |||||||| ||||  || ||| |||||||| |||||||||||||| |||||||||||||  || || |||||    
T  15066075 atgatagacggccaaggaagaaggatgctcctgctgcgattgtctgttttaattgtggtgagaaaggccacaagagcaatgtttgtccagaagaggtaaa 15065976  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
     | ||||||||||||||| |||||||| ||   |||| ||||||||||||||  ||||||||||| ||||||||| || |||||||||||||||||||||    
T  15065975 aagatgtttccggtgtggtaagaagggtcatgcattaactgattgcaagcataatgatattgtgttcttcaattgcaaagaagagggtcatattggttct 15065876  T
Q  317 cagtgcaagcagcctaagagggcgccgactac 348  Q
    ||||||||||||||||||| ||||||||||||    
T  15065875 cagtgcaagcagcctaagaaggcgccgactac 15065844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 17 - 348
Target Start/End: Original strand, 23414816 - 23415147
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||| |||||||||||||||||||| |||| ||||||||| |||||||||||||||| |||||||| | ||||||||||||||||||||| |||||||    
T  23414816 gctcatgacaaggttgtgaatgagcggaagaccaagggccaatagagtcgccctaagccttatagtgcccctgctgataagggcaaacagagaatggtcg 23414915  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || ||||||||||| ||||||| |||||| ||||||  || |||||| | |||||||||||||||||| || |||||||||| | | ||  | ||    
T  23414916 atgataggcggcctaagaagaaggatgctcctgcggagattgtctgtttcaactatggcgagaaaggccacaagagtaatgtttgtcctaaagagatcaa 23415015  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||||||| ||||||||| ||||||||| || ||  |||||||||||||||    ||||||||||||||||||||| || ||||||||||||||||||||     
T  23415016 gaaatgtgtccggtgtgacaagaagggtcatattgtagctgattgcaagcgaaatgatattgtgtgcttcaattgcaacgaagagggtcatattggttcc 23415115  T
Q  317 cagtgcaagcagcctaagagggcgccgactac 348  Q
    || ||||||||||||||||||| ||| |||||    
T  23415116 caatgcaagcagcctaagagggtgcctactac 23415147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 17 - 348
Target Start/End: Complemental strand, 16695268 - 16694937
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||||||||||||||| |||||| || |||| |||||||| ||||||||||| ||||| |||||||| | |||||||||| |||||||||| |||||||    
T  16695268 gctcattacaaggttgtaaatgagtggaagaccaagggccatcagagtcgcccgaagccttatagtgcccctgctgataagtgcaaacagagaatggtcg 16695169  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || ||||||||||| ||||||| ||| ||||||||||| | ||||||||||||||||||||||| ||| || ||||||||||  | |||  | ||    
T  16695168 atgataggcggcctaagaagaaggatgctccagctgagattacttgtttcaattgtggcgagaaaggccgcaagagtaatgtttgtccggtggagatcaa 16695069  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||||||| ||||||||||||||||||| || ||  |||||||||||||||    ||| |||||||||||||| ||||| ||||||||||||||||||||     
T  16695068 gaaatgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgaaatgacattgtgtgcttcaactgtaatgaagagggtcatattggttcc 16694969  T
Q  317 cagtgcaagcagcctaagagggcgccgactac 348  Q
    || ||||||||||| ||||||||||| |||||    
T  16694968 caatgcaagcagccgaagagggcgcctactac 16694937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 23079043 - 23079375
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||| |||||||| | |||||||||||| ||||||||||||||||    
T  23079043 gctcattacaagattgtgaatgagcggaagactaagggccagcagagtcgccctaagccttatagtgcccctgctgataagggaaaacagaggatggtcg 23079142  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    |||| |||||||| | ||| ||||||| |||||||| ||||   | ||| |||||||| |||||||||||||| |||||||||||||  | ||| |||||    
T  23079143 aggatagacggccaaggaagaaggatgctcctgctgtgattgtttgttttaattgtggtgagaaaggccacaagagcaatgtttgtccgggggaggtaaa 23079242  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    || |||||| || | ||| |||||||  ||   | ||||||| || ||||||   || |||||||| || | || ||| ||| | ||||||||||||||     
T  23079243 gagatgttttcgctatggtaagaaggttcatgcactagctgagtgtaagcataaggacattgtgtgttttagttctaaagaacaaggtcatattggttca 23079342  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |   ||||||||| |||||||||||||    
T  23079343 cagtgtacaaagcctaagaaggcgccgactact 23079375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 17 - 264
Target Start/End: Original strand, 14873611 - 14873858
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  14873611 gctcattacaagattgtgaatgtgcggaagactaagggccaacagagtcgccctaagccctataatgcccttgctgataagggcaaacagaggatggtcg 14873710  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    |||| |||||||| | ||| ||||||| || ||||||||||  || ||| |||||||| ||||||||||| || ||||||| ||||| ||  || |||||    
T  14873711 aggatagacggccgaggaagaaggatgctcatgctgagattgtctgttttaattgtggtgagaaaggccataagagcaatgcttgtcctggagaggtaaa 14873810  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaa 264  Q
     | ||||||| | ||||| |||||||| ||   |||||| ||||||||    
T  14873811 aagatgtttcggatgtggtaagaagggtcatgcattagccgattgcaa 14873858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 17 - 203
Target Start/End: Complemental strand, 17497795 - 17497609
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||| |||||||||||||| |||||||||| || ||||||||||||||||| || ||| | |||||||||||||||||||||| ||||||||    
T  17497795 gctcattacaagattgtgaatgagcggaagactaagggtcagcagagtcgccctaagccttacagtacccttgctgataagggcaaacagaagatggtcg 17497696  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtc 203  Q
    | || |||  ||||||||| ||||||| |||||| ||||||  || ||| | |||||| |||||||||||||| || |||| |||||    
T  17497695 aagatagatagcctaagaagaaggatgctcctgcagagattgtctgttttacttgtggtgagaaaggccacaagagtaatgcttgtc 17497609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 50 - 349
Target Start/End: Complemental strand, 24186258 - 24185962
Alignment:
Q  50 aagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcgaggaaagacggcctaagaataaggatgttcctg 149  Q
    ||||| || |||||||| |||||||| || ||||| |  |||||||| || ||||||||||||||||| || || ||||||||||| |||||||   ||     
T  24186258 aagggacagcagagtcgtcctaagccgtacagtgcccacgctgataaagggaaacagaggatggtcgatgataggcggcctaagaagaaggatg---cta 24186162  T
Q  150 ctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacat 249  Q
    ||||||||   | |||||||||||| | |||||||||||| |||||||| |||| ||| ||  | ||||| ||| ||||||||||||||||||| || ||    
T  24186161 ctgagattgtgtgtttcaattgtggtgtgaaaggccacaaaagcaatgtctgtcctgaagagatcaagaagtgtgtccggtgtggcaagaagggtcatat 24186062  T
Q  250 attagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
      ||||||||||||||| |   || |||||||| || || || || |||||||| |||||| |||| ||||| |  ||||||||||||||||||||||||    
T  24186061 tgtagctgattgcaagcgtaaggacattgtgtgttttaactgcaatgaagagggacatattagttcacagtgtactcagcctaagagggcgccgactact 24185962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 10008701 - 10008372
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||| || ||  |||||| || |||||||| |||||||| || ||||| | ||||||||| || ||||||| ||||||||    
T  10008701 gctcactacaaggtagtgaatgagaggaagggtaagggacagcagagtcgtcctaagccgtacagtgcccctgctgataaagggaaacagaagatggtcg 10008602  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||||||   | |||||||||||| |||||||||||||| ||||| || || | ||||||| | ||    
T  10008601 atgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgagaaaggccacaaaagcaacgtctgccctgaggaaatcaa 10008505  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||||||||| || ||  |  ||||||||||||| | |   || ||||| ||||| ||||| || | ||||||||| ||| ||||     
T  10008504 gaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtacagacattgtttgctttaattgcaacggagagggtcacattagttca 10008405  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  10008404 cagtgtactcagcctaagagggcgccgactact 10008372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 10909311 - 10908982
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||| || ||  |||||| || |||||||| |||||||| || ||||| | ||||||||| || ||||||| ||||||||    
T  10909311 gctcactacaaggtagtgaatgagaggaagggtaagggacagcagagtcgtcctaagccgtacagtgcccctgctgataaagggaaacagaagatggtcg 10909212  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||||   || ||||||   | |||||||||||| |||||||||||||| ||||| || || | ||||||| | ||    
T  10909211 atgttaggcggcctaagaagaaggatgtt---gcagagattgtgtgtttcaattgtggtgagaaaggccacaaaagcaacgtctgccctgaggaaatcaa 10909115  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||||||||| || ||  |  ||||||||||||| | |   || ||||| ||||| ||||| || | ||||||||| ||| ||||     
T  10909114 gaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtacagacattgtttgctttaattgcaacggagagggtcacattagttcc 10909015  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  10909014 cagtgtactcagcctaagagggcgccgactact 10908982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 20059083 - 20059412
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||  || ||   ||||| || |||||||| |||||||| || ||||| | ||||||||| || ||||||| ||||||||    
T  20059083 gctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccctgctgataaagggaaacagaagatggtcg 20059182  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||||||   | |||||||||||| |||||||||||||| ||||| || || | ||||||| | ||    
T  20059183 atgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgagaaaggccacaaaagcaacgtctgccctgaggaaatcaa 20059279  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||||||||| || ||  |  ||||||||||||| | |   || ||||| ||||| ||||| || | ||||||||| ||| ||||     
T  20059280 gaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtacagacattgtttgctttaattgcaacggagagggtcacattagttca 20059379  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  20059380 cagtgtactcagcctaagagggcgccgactact 20059412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 43165776 - 43165447
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||| || ||   ||||| || |||||||| |||||||| || ||||| |  ||||| || || ||||||| ||||||||    
T  43165776 gctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaagggaaacagaagatggtcg 43165677  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||||||   | |||||||||||| |||||||||||||| ||||| || || | ||||||| | ||    
T  43165676 atgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgagaaaggccacaagagcaacgtctgccctgaggaaatcaa 43165580  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||| |||||||| ||  |  ||||||||||||| | |   || ||||| ||||| ||||| || | ||||||||| ||| ||||     
T  43165579 gaagtgtgtccggtgtggtaagaagggtcatgttgtagctgattgcaaccgtacagacattgtttgctttaattgcaatggagagggtcacattagttca 43165480  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  43165479 cagtgtactcagcctaagagggcgccgactact 43165447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 3689044 - 3688715
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||| || ||   ||||| || |||||||| |||||||| || ||||| |  ||||| ||||| ||||||| ||||||||    
T  3689044 gctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaagggtaaacagaagatggtcg 3688945  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||||||||||   |  ||||||||||| |||||||||||||| ||||| |  |||  ||||||| | ||    
T  3688944 acgttaggcggcctaagaagaaggatg---ctgctgagattgtgtgcttcaattgtggtgagaaaggccacaagagcaacgcctgttctgaggaaatcaa 3688848  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||| |||||||| ||  |  |||||||||| || | ||  || ||||||||||| || || || | ||| ||||| ||| |||||    
T  3688847 gaagtgtgtccggtgtggtaagaagggtcatgtcgtagctgattgtaatcgtgcagacattgtgtgctttaactgcaatggagaaggtcacattagttct 3688748  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||| ||||||||||    
T  3688747 cagtgtactcagcctaagagggtgccgactact 3688715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 6603836 - 6603507
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||| || ||   ||||| || |||||||| |||||||| || ||||| |  ||||| || || ||||||| ||||||||    
T  6603836 gctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaagggaaacagaagatggtcg 6603737  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||||||   |  ||||||||||| |||||||||||||| ||||| |  |||| ||||||| | ||    
T  6603736 atgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgcttcaattgtggtgagaaaggccacaagagcaacgcctgtcctgaggaaatcaa 6603640  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||| |||||||  ||  |  ||||||||||||| | |   || ||||||||||| ||||| || | ||||||||| ||| | |||    
T  6603639 gaactgtgtccggtgtggtaagaaggatcatgttgtagctgattgcaatcgtacagacattgtgtgctttaattgcaatggagagggtcacattagctct 6603540  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  6603539 cagtgtactcagcctaagagggcgccgactact 6603507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 12889810 - 12889481
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||  || ||   ||||| || |||||||| |||||||| || ||||| |  ||||| || || ||||||| ||||||||    
T  12889810 gctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaagggaaacagaagatggtcg 12889711  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||||||   | |||||||||||| |||||||||||||| ||||| || || | ||||||| | ||    
T  12889710 atgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgagaaaggccacaagagcaacgtctgccctgaggaaatcaa 12889614  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||| |||||||| ||  |  ||||||||||||| | |   || ||||| ||||| ||||| || | ||||||||| ||| ||||     
T  12889613 gaagtgtgtccggtgtggtaagaagggtcatgttgtagctgattgcaaccgtacagacattgtttgctttaattgcaatggagagggtcacattagttca 12889514  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  12889513 cagtgtactcagcctaagagggcgccgactact 12889481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 15345274 - 15345603
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||  || ||   ||||| || |||||||  |||||||| || ||||| |  ||||| || || ||||||| ||||||||    
T  15345274 gctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcctcctaagccgtacagtgcccccgctgacaaaggtaaacagaagatggtcg 15345373  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||||||   | |||||||||||| |||||||||||||| ||||| || || | ||||||| | ||    
T  15345374 atgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgagaaaggccacaaaagcaacgtctgccctgaggaaatcaa 15345470  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||||||||| || ||  |  ||||||||||||| | |   || ||||||||||| ||||| || | ||||||||| ||| ||||     
T  15345471 gaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtacagacattgtgtgctttaattgcaatggagagggtcacattagttca 15345570  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  15345571 cagtgtactcagcctaagagggcgccgactact 15345603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 48428548 - 48428219
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||  || ||   ||||| || |||||||| |||||||| || ||||| |  ||||| || || ||||||| ||||||||    
T  48428548 gctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaagggaaacagaagatggtcg 48428449  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||||||   | |||||||||||| |||||||||||||| ||||| || || | ||||||| | ||    
T  48428448 atgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgagaaaggccacaagagcaacgtctgccctgaggaaatcaa 48428352  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||| |||||||| ||  |  ||||||||||||| | |   || ||||| ||||| ||||| || | ||||||||| ||| ||||     
T  48428351 gaagtgtgtccggtgtggtaagaagggtcatgttgtagctgattgcaaccgtacagacattgtttgctttaattgcaatggagagggtcacattagttca 48428252  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  48428251 cagtgtactcagcctaagagggcgccgactact 48428219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 15713085 - 15713414
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||| || ||   ||||| || |||||||| |||||||| || ||||| |  |||||||| || || |||||||||||||    
T  15713085 gctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgataaagggaagcagaggatggtcg 15713184  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || ||||||||||| |||||||   || | ||||||   | |||||||||||| |||||||||||||| ||||| || || | ||| ||| | ||    
T  15713185 atgataggcggcctaagaagaaggatg---ctacagagattgtgtgtttcaattgtggtgagaaaggccacaaaagcaacgtctgccctgaagaaatcaa 15713281  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| | |||||||||||||| || || ||  ||||||| ||||||| |   || |||||||| || || || || | ||||||||| ||| ||||     
T  15713282 gaagtgtgttcggtgtggcaagaaaggtcatattgtagctgaatgcaagcgtacggacattgtgtgttttaactgcaatggagagggtcacattagttca 15713381  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |   |||||||||||||||||||||||    
T  15713382 cagtgtacttagcctaagagggcgccgactact 15713414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 16638874 - 16638545
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||| || ||   ||||| || |||||||| |||||||| || ||||| |  ||||| || || ||||||| ||||||||    
T  16638874 gctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaagggaaacagaagatggtcg 16638775  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||||||   | |||||||||||| |||||||||||||| ||||| || || | ||| ||| | ||    
T  16638774 atgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgagaaaggccacaagagcaacgtctgccctgaagaaatcaa 16638678  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| |||  ||||||||||||||| || ||  |  ||||||||||||| | |   || ||||||||||| ||||| || | ||| ||||| ||| ||||     
T  16638677 gaagtgtgcccggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtacggacattgtgtgctttaattgcaacggagaaggtcacattagttca 16638578  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  16638577 cagtgtactcagcctaagagggcgccgactact 16638545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 53382048 - 53382376
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||| || ||   ||||| || |||||||| |||||||| || ||||| |   |||| || || ||||||| ||||||||    
T  53382048 gctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgccccc-ctgacaaagggaaacagaagatggtcg 53382146  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||||||   |  ||||| |||||||||||||||||||| ||||| || |||| ||||||| | ||    
T  53382147 atgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgcttcaactgtggcgagaaaggccacaagagcaacgtctgtcctgaggaaatcaa 53382243  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||| |||||||| ||  |  | ||||||||||| | |   || | ||||||||| ||||| || | ||||||||| ||| |||||    
T  53382244 gaagtgtgtccggtgtggtaagaagggtcatgtggtggctgattgcaatcgtacagacactgtgtgctttaattgcaatgcagagggtcacattagttct 53382343  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  53382344 cagtgtactcagcctaagagggcgccgactact 53382376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 50 - 349
Target Start/End: Original strand, 15399580 - 15399875
Alignment:
Q  50 aagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcgaggaaagacggcctaagaataaggatgttcctg 149  Q
    ||||| || |||||||| |||||||| || ||||| |  |||||||| || ||||||| ||||||||| || || ||||||||||| |||||||   ||     
T  15399580 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgataaagggaaacagaagatggtcgatgataggcggcctaagaagaaggatg---cta 15399676  T
Q  150 ctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacat 249  Q
    ||||||||   | |||||||||||| | |||||||||||| |||||||| || | ||||||| | ||||| ||| |||||||||||||||| || || ||    
T  15399677 ctgagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtctgccctgaggaaatcaagaagtgtgtccggtgtggcaagaaaggtcatat 15399776  T
Q  250 attagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
      |||| || ||||||| |   || |||||||| || || || || | ||||||||| | | |||| ||||| |  ||||||||||||||||||||||||    
T  15399777 tgtagccgaatgcaagcgtacggacattgtgtgttttaactgcaatggagagggtcaca-tagttcacagtgtactcagcctaagagggcgccgactact 15399875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 13255791 - 13255462
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||| || ||   ||||| || |||||||| |||||||| || ||||| |  ||||| || || ||||||| ||||||||    
T  13255791 gctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaagggaaacagaagatggtcg 13255692  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||  |||||||   |||| ||||||   |  ||||||||||| |||||||||||||| ||||| | ||||  ||||||| | ||    
T  13255691 atgttaggcggcctaagaggaaggatg---ctgcagagattgtgtgcttcaattgtggtgagaaaggccacaagagcaacgcttgttctgaggaaatcaa 13255595  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||| |||||||| ||  |  ||||||||||||| | |   || ||||| ||||| ||||| || | ||||||||| ||| ||||     
T  13255594 gaagtgtgtccggtgtggtaagaagggtcatgtggtagctgattgcaaccgtacagacattgtttgctttaattgcaacggagagggtcacattagttca 13255495  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
     |||| |  ||||||||||||||||||||||||    
T  13255494 tagtgtactcagcctaagagggcgccgactact 13255462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 16753730 - 16754059
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||| || ||   ||||| || || ||||| |||||||| || ||||| |  ||||| || || ||||| | ||||||||    
T  16753730 gctcactacaaggtagtgaatgagaggaagggcaagggacagcatagtcgtcctaagccgtacagtgcccccgctgacaaagggaaacaaaagatggtcg 16753829  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||||||   |  ||||||||||| |||||||||||||| ||||| |  |||| ||||||| | ||    
T  16753830 atgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgcttcaattgtggtgagaaaggccacaagagcaacgcctgtcctgaggaaatcaa 16753926  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| || ||||||| |||||||| ||  |  ||||||||||||| | |   || ||||||||||| ||||| || | ||||||||| ||| |||||    
T  16753927 gaagtgtgtctggtgtggtaagaagggtcatgttgtagctgattgcaatcgtacagacattgtgtgctttaattgcaatggagagggtcacattagttct 16754026  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    || || |  ||||||||||||||||||||||||    
T  16754027 caatgtactcagcctaagagggcgccgactact 16754059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 26790442 - 26790771
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||  || ||   ||||| || |||||||| |||||||| || ||||| |    |||||| || ||||||| ||||||||    
T  26790442 gctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccaatgataaagggaaacagaagatggtcg 26790541  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||||||   | |||||||||||| |||||||||||||| ||||| || |  | ||||||| | ||    
T  26790542 atgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgagaaaggccacaagagcaacgtctaccctgaggaaatcaa 26790638  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||||||||| || ||  |  ||||||||||||| | |   ||  |||||||||| ||||| || | ||||||||| ||| ||||     
T  26790639 gaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtacggacgttgtgtgctttaattgcaacggagagggtcacattagttca 26790738  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  |||||||||| |||||||||||||    
T  26790739 cagtgtactcagcctaagacggcgccgactact 26790771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 5421959 - 5422288
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||| ||| || ||   ||||| || |||||||| |||||||| || ||||| |  ||||| || || ||||||| ||||||||    
T  5421959 gctcactacaaggtagtgaacgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaaggtaaacagaagatggtcg 5422058  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||||||   |  ||||||||||| |||||||||||||| || || |  || | ||||||| | ||    
T  5422059 atgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgcttcaattgtggtgagaaaggccacaagagtaacgcctgccctgaggaaatcaa 5422155  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||| ||||| || ||  |  ||||||||||||| | |   || ||||||||||| ||||| || | ||||||||| ||| ||||     
T  5422156 gaagtgtgtccggtgtggtaagaaaggtcatgttgtagctgattgcaatcgtacagacattgtgtgctttaattgcaatggagagggtcacattagttca 5422255  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
     |||| |  ||||||||||||||||||||||||    
T  5422256 tagtgtactcagcctaagagggcgccgactact 5422288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 15586421 - 15586750
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||  || ||   ||||| ||||| ||||| |||||||| || ||||| |  ||||| || || ||||||| ||||||||    
T  15586421 gctcactacaaggtagtgaatgaaaggaagggcaagggacaacaaagtcgtcctaagccgtacagtgcccccgctgacaaagggaaacagaagatggtcg 15586520  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||  |||||||   |||| ||||||   |  ||||||||||| |||||||||||||| ||||| |  |||  ||||||| | ||    
T  15586521 atgttaggcggcctaagaggaaggatg---ctgcggagattgtgtgcttcaattgtggtgagaaaggccacaagagcaacgcctgttctgaggaaatcaa 15586617  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||| |||||||| ||  |  | ||||||||||| | |   || ||||| ||||| ||||| || | ||||||||| ||| ||||     
T  15586618 gaagtgtgtccggtgtggtaagaagggtcatgtggtggctgattgcaaccgtacagacattgtttgctttaattgcaacggagagggtcacattagttca 15586717  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  15586718 cagtgtactcagcctaagagggcgccgactact 15586750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 335
Target Start/End: Original strand, 12843129 - 12843447
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||| |||||||||||||  |    || || || |||||||| || ||||  |||||||||| ||||||||||||||||||||| ||| | |    
T  12843129 gctcattacaagattgtgaatgagcgaaaagtcaaaggtcagcagagtcgtccaaagctttatagtgctcctgctgataagggcaaacagagaatgattg 12843228  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || ||||||| ||| || |||| ||||| |||||||  ||  |  | |||||| |||||||||||||| || |||| ||||| ||  || || ||    
T  12843229 atgagaggcggcctaggaagaaagatgctcctgttgagattgtctgctatacttgtggtgagaaaggccacaagagtaatgcttgtcctggagatgtgaa 12843328  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
        |||||||| ||||| ||||| || || | | | ||||| || ||  ||| |||| |||||| ||| ||||| || ||||| ||||||||||||||     
T  12843329 acggtgtttccgttgtggtaagaaagggcatacacttgctgagtgtaaagatgatgatgttgtgttctttaattgcaatgaagaaggtcatattggttcg 12843428  T
Q  317 cagtgcaagcagcctaaga 335  Q
    || |||||| | |||||||    
T  12843429 caatgcaagaatcctaaga 12843447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 17 - 240
Target Start/End: Original strand, 5110438 - 5110658
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||  || ||   ||||| ||| ||||||| |||||||| || ||||  |  ||||| || || ||||||| ||||||||    
T  5110438 gctcactacaaggtagtgaatgaaaggaagggcaagggacaatagagtcgtcctaagccgtacagtgtccccgctgacaaaggtaaacagaagatggtcg 5110537  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || | ||||||||| |||||||   |||| ||||||   | |||||||||||| |||||||||||||| ||||| || || | ||||||| | ||    
T  5110538 atgttaggcagcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgagaaaggccacaaaagcaacgtctgccctgaggaaattaa 5110634  T
Q  217 gaaatgtttccggtgtggcaagaa 240  Q
    ||| ||| ||||||||||||||||    
T  5110635 gaagtgtgtccggtgtggcaagaa 5110658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 291
Target Start/End: Original strand, 14578447 - 14578721
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||| |||||||||||||| || | ||||| || ||||| || |||||||| || | ||||| ||| |||||||| |||||||| ||||| |    
T  14578447 gctcattacaagattgtgaatgagcggaaggccaagggtcagcagagccgtcctaagccttacaatgctcctgccgataagggtaaacagagaatggttg 14578546  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || || ||||  || || |||| ||||| |||||||   |  |    |||||| |||||||||||||| || |||| ||||| || ||| || ||    
T  14578547 atgataggcgccctagaaagaaagatgctcctgttgagattgtgtgctatgcttgtggtgagaaaggccacaagagtaatgcttgtcctggggatgtgaa 14578646  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattg 291  Q
    ||  |||||||| ||||| ||||| || || | | | ||||| || || |||| |||||| || |||||||||||    
T  14578647 gaggtgtttccgttgtggtaagaaaggtcatacacttgctgagtgtaaacatgatgatatagtatgcttcaattg 14578721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 306 - 347
Target Start/End: Original strand, 14873883 - 14873924
Alignment:
Q  306 atattggttctcagtgcaagcagcctaagagggcgccgacta 347  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  14873883 atattggttctcagtgcaagcagcctaagaaggcgccgacta 14873924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 323
Target Start/End: Original strand, 16384540 - 16384693
Alignment:
Q  170 tgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatg 269  Q
    ||||||||||||| |||||| || || ||||||    |||| |  ||||| || ||| |||||||  ||||||| ||||| || ||||||||||||| ||    
T  16384540 tgtggcgagaaagtccacaagagtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttggctgattgcaagcgtg 16384639  T
Q  270 gtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgca 323  Q
    ||||| |||| ||||  |||||||| |||||||| |||||  || |||||||||    
T  16384640 gtgatgttgtatgctataattgtaatgaagagggccatatcagtactcagtgca 16384693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 215 - 335
Target Start/End: Original strand, 2037125 - 2037245
Alignment:
Q  215 aagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggtt 314  Q
    ||||| || ||||| ||||| ||||| || || | | ||||||| ||||||| |||||||||||| || ||||||||| | || || |||||| || |||    
T  2037125 aagaagtgcttccgatgtgggaagaaagggcatacaatagctgaatgcaagcgtggtgatattgtttgtttcaattgtgatgaggaaggtcatcttagtt 2037224  T
Q  315 ctcagtgcaagcagcctaaga 335  Q
    | ||||||||| |||||||||    
T  2037225 cgcagtgcaagaagcctaaga 2037245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 215 - 335
Target Start/End: Original strand, 2040866 - 2040986
Alignment:
Q  215 aagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggtt 314  Q
    ||||| || ||||| ||||| ||||| || || | | ||||||| ||||||| |||||||||||| || ||||||||| | || || |||||| || |||    
T  2040866 aagaagtgcttccgatgtgggaagaaagggcatacaatagctgaatgcaagcgtggtgatattgtttgtttcaattgtgatgaggaaggtcatcttagtt 2040965  T
Q  315 ctcagtgcaagcagcctaaga 335  Q
    | ||||||||| |||||||||    
T  2040966 cgcagtgcaagaagcctaaga 2040986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 195
Target Start/End: Complemental strand, 6597156 - 6596981
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||| || ||   ||||| || |||||||| |||||||| || ||||| |  ||||| || || ||||||| ||||||||    
T  6597156 gctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaagggaaacagaagatggtcg 6597057  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaa 195  Q
    | |  || ||||||||||| |||||||   |||| ||||||   |  ||||||||||| |||||||||||||| |||||    
T  6597056 atgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgcttcaattgtggtgagaaaggccacaagagcaa 6596981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 215 - 335
Target Start/End: Complemental strand, 14039662 - 14039542
Alignment:
Q  215 aagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggtt 314  Q
    ||||| || ||||| ||||| ||||| || || | | ||||||| ||||||| |||||||||||| || ||||||||| | || || |||||| || |||    
T  14039662 aagaagtgcttccgatgtgggaagaaagggcatacaatagctgaatgcaagcgtggtgatattgtttgtttcaattgtgatgaggaaggtcatcttagtt 14039563  T
Q  315 ctcagtgcaagcagcctaaga 335  Q
    | ||||||||| |||||||||    
T  14039562 cgcagtgcaagaagcctaaga 14039542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 50 - 143
Target Start/End: Complemental strand, 15359120 - 15359027
Alignment:
Q  50 aagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcgaggaaagacggcctaagaataaggatg 143  Q
    ||||| || ||||||||||||||||| || ||||| |  |||||||| |  ||||||| ||||||||| || || ||||||||||| |||||||    
T  15359120 aagggacagcagagtcgccctaagccgtacagtgcccccgctgataaagtgaaacagaagatggtcgatgataggcggcctaagaagaaggatg 15359027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 335
Target Start/End: Complemental strand, 19040073 - 19040001
Alignment:
Q  263 aagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaaga 335  Q
    |||||||  ||| ||||||| |||||||| || ||||||||||||||||||||||| ||| || | |||||||    
T  19040073 aagcatgaagatgttgtgtgtttcaattgcaatgaagagggtcatattggttctcaatgcgagaaacctaaga 19040001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 349
Target Start/End: Complemental strand, 19727712 - 19727532
Alignment:
Q  169 ttgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcat 268  Q
    |||||| ||||||||||| || || || | ||||| || ||| |||||||  ||||| || ||||| |||||||| || | | | || || || ||||||    
T  19727712 ttgtggtgagaaaggccataagagtaacgcttgtcctggggatgtaaagaggtgttttcgttgtggtaagaagggacatacacttgccgaatgtaagcat 19727613  T
Q  269 ggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
    | |||| |||| || |||||||| || || || |||||||||||||| || || ||| ||||||||| ||| | |||||||    
T  19727612 gatgatgttgtatgtttcaattgcaatgaggaaggtcatattggttcgcaatgtaagaagcctaagaaggcacagactact 19727532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 252 - 307
Target Start/End: Complemental strand, 15230482 - 15230427
Alignment:
Q  252 tagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcat 307  Q
    ||||||| ||||||| |||||||||||| |||||||||||| | ||||| ||||||    
T  15230482 tagctgaatgcaagcgtggtgatattgtttgcttcaattgtgatgaagaaggtcat 15230427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 252 - 307
Target Start/End: Complemental strand, 15236350 - 15236295
Alignment:
Q  252 tagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcat 307  Q
    ||||||| ||||||| |||||||||||| |||||||||||| | ||||| ||||||    
T  15236350 tagctgaatgcaagcgtggtgatattgtttgcttcaattgtgatgaagaaggtcat 15236295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 335
Target Start/End: Complemental strand, 35983097 - 35982977
Alignment:
Q  215 aagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggtt 314  Q
    ||||| |||||| | |||||  |||| || |||| ||| ||||||||||||| ||| |||||||| |||| ||| ||||| || || || |||||| |||    
T  35983097 aagaagtgtttcagatgtggacagaaaggacacacattggctgattgcaagcgtggggatattgtttgctacaactgtaatgaggaaggacatattagtt 35982998  T
Q  315 ctcagtgcaagcagcctaaga 335  Q
    | || || | |||||||||||    
T  35982997 cgcattgtacgcagcctaaga 35982977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 229; Significance: 1e-126; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 24704809 - 24705141
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||    
T  24704809 gctcattacaaggttgtgaatgagcagaagactaagggccagcagagtcgccctaagccctatagtgcccctgctgataagggcaaacataggatggtcg 24704908  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    |||||||||| |||||||| |||||||||||||||||||||| || |||||||||||| |||||||||||||| ||||||||||||| |||||| |||||    
T  24704909 aggaaagacgacctaagaagaaggatgttcctgctgagattatctgtttcaattgtggtgagaaaggccacaagagcaatgtttgtcctgaggaggtaaa 24705008  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||||||||||| ||||||||||||||| ||||  |||||||||||||||| |  ||| |||||||||||||||||||| ||||||||||| || ||||||    
T  24705009 gaaatgtttccagtgtggcaagaagggtcacactttagctgattgcaagcgtaatgacattgtgtgcttcaattgtaatgaagagggtcacataggttct 24705108  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||||||||||||||||| |||||||||||||    
T  24705109 cagtgcaagcagcctaagaaggcgccgactact 24705141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 7 - 348
Target Start/End: Original strand, 24656975 - 24657316
Alignment:
Q  7 ggacatcaaagctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacag 106  Q
    ||||| || |||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||| | | |||||||||||||||||    
T  24656975 ggacaccagagctcattacaaggttgttaatgagcggaagactaagggccagcagagtcgccctaagccctatagtgcccctactgataagggcaaacag 24657074  T
Q  107 aggatggtcgaggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttg 206  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||| | |||||||||||| |||||||||||||| || | |||||||| ||    
T  24657075 aggatggtcgaggagagacggcctaagaaaaaggatgttcctgctgagattacttgtttcaattgtggtgagaaaggccacaagagtactgtttgtcctg 24657174  T
Q  207 aggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtca 306  Q
    |||| || ||||| ||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||| ||||| || ||| | || || ||||||||    
T  24657175 aggaggtgaagaagtgtttccggtgtggcaagaagggtcacacattagctgattgcaaacatggtgatatcgtgtgttttaatggcaaagaggagggtca 24657274  T
Q  307 tattggttctcagtgcaagcagcctaagagggcgccgactac 348  Q
    ||||||||| || ||||||||||||||||||||||| |||||    
T  24657275 tattggttcccaatgcaagcagcctaagagggcgcctactac 24657316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 23028789 - 23029120
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||| |||||||||||||| | ||||| ||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  23028789 gctcattacaagattgtgaatgagcggaatactaaaggccagcagagtcgccctaagccctatagtgcccctgctgataagggcaaacagaggatggtcg 23028888  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    |||| |||||||| | ||| ||||||| |||||||||||||  || |||  ||||||| |||||||||||||| ||||||| ||||| ||  || |||||    
T  23028889 aggatagacggccaaggaagaaggatgctcctgctgagattgtctgttt-tattgtggtgagaaaggccacaagagcaatgcttgtcctggagaggtaaa 23028987  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    || ||||||||| ||||| |||||||| ||   | ||||||||||||| |||  ||||||||||||||||||||| || ||||||||||| |||||||||    
T  23028988 gagatgtttccgatgtggtaagaagggtcatgcactagctgattgcaaacataatgatattgtgtgcttcaattgcaatgaagagggtcacattggttct 23029087  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||||||||| ||||||| |||||||||||||    
T  23029088 cagtgcaagcaacctaagaaggcgccgactact 23029120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 24678603 - 24678271
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||| | |||||||||||| |||||||||||||| |||||||||||||||||||||| || | |||||||||||||||||||||||||||||    
T  24678603 gctcattacaagatcgtgaatgagcggaagactaagggccaatagagtcgccctaagccctatagcgcccctgctgataagggcaaacagaggatggtcg 24678504  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || |||||||||||||| |||||||||||||||||||||  ||  || |||||||| |||||||||||||| ||||||| |||||  |  || || ||    
T  24678503 atgatagacggcctaagaagaaggatgttcctgctgagattgtctgctttaattgtggtgagaaaggccacaagagcaatgcttgtccgggagaggttaa 24678404  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    || ||||||||| ||||| |||||||| ||   | ||||||| ||||||| |  ||| ||||||||||||||||| |  |||||| |||| || ||||||    
T  24678403 gagatgtttccgttgtggtaagaagggtcatgcactagctgagtgcaagcgtaatgacattgtgtgcttcaattgcattgaagagagtcacataggttct 24678304  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||||||||||||||||| |||||||||||||    
T  24678303 cagtgcaagcagcctaagaaggcgccgactact 24678271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 17 - 347
Target Start/End: Original strand, 22462808 - 22463138
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||||||||||||||| ||||||||| |||| |||||||| ||||||||||||||||| |||||||| | | || |||||||| ||||||| |||||||    
T  22462808 gctcattacaaggttgtaaatgagcggaagaccaagggccagcagagtcgccctaagccttatagtgccccttctaataagggcgaacagagaatggtcg 22462907  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || ||  |||||||||| ||||||| |||||| ||||||   | |||||| ||||| |||||||||||||| || |||||||||| ||| ||  | ||    
T  22462908 atgataggtggcctaagaagaaggatgctcctgcggagattgtttgtttcaactgtggtgagaaaggccacaagagtaatgtttgtcctgaagagatcaa 22463007  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||||||| ||| ||||||||||||||| || ||  ||||||||||||||| |  ||||||||||||||||||||| || ||||||||||||||||||||     
T  22463008 gaaatgtgtccagtgtggcaagaagggtcatatcgtagctgattgcaagcgtaatgatattgtgtgcttcaattgcaacgaagagggtcatattggttcc 22463107  T
Q  317 cagtgcaagcagcctaagagggcgccgacta 347  Q
    || ||||||||||| ||||||||||| ||||    
T  22463108 caatgcaagcagccgaagagggcgcctacta 22463138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 22742293 - 22742625
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||||| |||||||||||| |||||||||| || ||||||||||||||||| |||||||| | ||||||||||||||||||||| ||||| |    
T  22742293 gctcattacaaggtcgtgaatgagcggaagactaagggtcagcagagtcgccctaagccttatagtgcccctgctgataagggcaaacagagaatggttg 22742392  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    |||| |||||||| | ||| ||||||||| ||| |||||||  ||  || |||||||| |||||| ||||||| ||||||| |||||  |  || |||||    
T  22742393 aggatagacggccgaggaagaaggatgttgctggtgagattgtctgctttaattgtggtgagaaatgccacaagagcaatgcttgtccgggagaggtaaa 22742492  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
     | ||||||||| || || |||||||| ||   | ||||||| ||||| |||  ||| ||||||||||||||||| || ||||||||||| ||||||||     
T  22742493 tagatgtttccgatgcggtaagaagggtcatgcactagctgagtgcaaacataatgacattgtgtgcttcaattgcaatgaagagggtcacattggttcg 22742592  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| ||||||||||||| |||||||||||||    
T  22742593 cagtgtaagcagcctaagaaggcgccgactact 22742625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 23105054 - 23105387
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||| |||||||||||| | ||||||||||||| ||||| ||||||||||| || ||||| | ||||||||||||||||||||| |||||||    
T  23105054 gctcattacaagattgtgaatgagcagaagactaagggccagcagagccgccctaagccttacagtgcacctgctgataagggcaaacagagaatggtcg 23105153  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || |||||||| | ||| ||||||| ||||||||||||||  | ||||  |||||| ||||| |||||||| || |||| ||||| | | || || ||    
T  23105154 aagatagacggccgaggaagaaggatgctcctgctgagattatttgtttctcttgtggtgagaagggccacaagagtaatgcttgtccttaagacgtcaa 23105253  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagag-ggtcatattggttc 315  Q
    || |||||| || ||||| |||||||| ||   | ||||||| ||||| |||| ||||||||||||||||||||| || |||||| ||||| ||||||||    
T  23105254 gagatgttttcgctgtggaaagaagggtcatgcactagctgagtgcaaacatgatgatattgtgtgcttcaattgcaatgaagagaggtcacattggttc 23105353  T
Q  316 tcagtgcaagcagcctaagagggcgccgactact 349  Q
     ||||| ||||||||||||| |||||||||||||    
T  23105354 acagtgtaagcagcctaagaaggcgccgactact 23105387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 137 - 349
Target Start/End: Original strand, 11351158 - 11351370
Alignment:
Q  137 aaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggca 236  Q
    ||||||| |||||| ||||||  || |||||||||||| |||||||||||||| |||||||||||||   |||| ||| ||||||||||| |||||||||    
T  11351158 aaggatgctcctgcggagattgtctgtttcaattgtggtgagaaaggccacaagagcaatgtttgtccaaaggaggtagagaaatgtttctggtgtggca 11351257  T
Q  237 agaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagag 336  Q
    ||||||| || | ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||    
T  11351258 agaagggtcatacattagctgattgcaagcatagtgatattgtgtgcttcaattgcaaggaagagggtcacattggttctcagtccaagcagcctaagag 11351357  T
Q  337 ggcgccgactact 349  Q
    || ||||||||||    
T  11351358 ggtgccgactact 11351370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 16 - 349
Target Start/End: Original strand, 23116385 - 23116718
Alignment:
Q  16 agctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtc 115  Q
    |||||||||||||||||| |||||| || ||||||||||| | ||||||||||||||||| |||||||| | ||||||||||||||| ||||| ||||||    
T  23116385 agctcattacaaggttgttaatgagaggaagactaagggcaagcagagtcgccctaagccttatagtgcccctgctgataagggcaagcagagaatggtc 23116484  T
Q  116 gaggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaa 215  Q
    || || || ||||||||||| ||||||| |||| | ||||||   | |||||| ||||||| |||||||||||| || |||||||||| ||| ||  | |    
T  23116485 gatgataggcggcctaagaagaaggatgctccttcagagattgtttgtttcaactgtggcgggaaaggccacaagagtaatgtttgtcctgaagagatca 23116584  T
Q  216 agaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttc 315  Q
    |||||||| |||||||| |||||| ||| || ||  |||||||||||||||||   || |||||||| || || || || ||||||||||| ||| ||||    
T  23116585 agaaatgtgtccggtgtagcaagaggggtcatatcgtagctgattgcaagcataaggacattgtgtgttttaactgcaatgaagagggtcacattagttc 23116684  T
Q  316 tcagtgcaagcagcctaagagggcgccgactact 349  Q
     ||||| |  ||||||||||||||||||||||||    
T  23116685 acagtgtactcagcctaagagggcgccgactact 23116718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 22733101 - 22733433
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||| |||||||||||||| |||||||||| || ||||||||||||||||  || ||||| | |||||||||||||||| |||| |||||||    
T  22733101 gctcattacaagattgtgaatgagcggaagactaagggtcagcagagtcgccctaagctttacagtgcccctgctgataagggcaaagagagaatggtcg 22733200  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || |||| ||||||||| ||||||| |||| | || |||  || ||| | |||||| |||||||||||||| || |||| ||||| || |||    ||    
T  22733201 aagatagacagcctaagaagaaggatgctcctccagaaattgtctgttttacttgtggtgagaaaggccacaagagtaatgcttgtcctggggataccaa 22733300  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    || |||||| |  ||||| |||||||| ||   | ||||||| ||||| |||| |||||  || |||||||||||||| ||||||||||| ||||||||     
T  22733301 gagatgtttacaatgtggaaagaagggtcatgcactagctgagtgcaaacatgatgataaagtatgcttcaattgtaatgaagagggtcacattggttca 22733400  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||||||| | ||||||| || ||||||||||    
T  22733401 cagtgcaagaaacctaagaaggtgccgactact 22733433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 93 - 348
Target Start/End: Complemental strand, 23205354 - 23205099
Alignment:
Q  93 ataagggcaaacagaggatggtcgaggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacag 192  Q
    |||||||||| ||||| |||||||| || || ||||||||||| ||| ||| |||| | ||||||   | |||||| |||||||||||||||||||| ||    
T  23205354 ataagggcaaccagagaatggtcgatgataggcggcctaagaagaagaatgctccttcggagattgtttgtttcaactgtggcgagaaaggccacaagag 23205255  T
Q  193 caatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgt 292  Q
     |||||||||| ||| ||  | ||||||||| ||| ||||||||||||||| || ||  ||||||||||||||     ||||||||||||||||||||||    
T  23205254 taatgtttgtcctgaagagatcaagaaatgtgtccagtgtggcaagaagggtcatattgtagctgattgcaagagaaatgatattgtgtgcttcaattgt 23205155  T
Q  293 aaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactac 348  Q
    || ||||||||||| |||||||| || ||||||||||||||||||||||| |||||    
T  23205154 aatgaagagggtcacattggttcccaatgcaagcagcctaagagggcgcctactac 23205099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 93 - 348
Target Start/End: Complemental strand, 23676958 - 23676703
Alignment:
Q  93 ataagggcaaacagaggatggtcgaggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacag 192  Q
    |||||||||| ||||| |||||||| || || ||||||||||| ||| ||| |||| | ||||||   | |||||| |||||||||||||||||||| ||    
T  23676958 ataagggcaaccagagaatggtcgatgataggcggcctaagaagaagaatgctccttcggagattgtttgtttcaactgtggcgagaaaggccacaagag 23676859  T
Q  193 caatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgt 292  Q
     |||||||||| ||| ||  | ||||||||| ||| ||||||||||||||| || ||  ||||||||||||||     ||||||||||||||||||||||    
T  23676858 taatgtttgtcctgaagagatcaagaaatgtgtccagtgtggcaagaagggtcatattgtagctgattgcaagagaaatgatattgtgtgcttcaattgt 23676759  T
Q  293 aaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactac 348  Q
    || ||||||||||| |||||||| || ||||||||||||||||||||||| |||||    
T  23676758 aatgaagagggtcacattggttcccaatgcaagcagcctaagagggcgcctactac 23676703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 17 - 342
Target Start/End: Original strand, 23039904 - 23040229
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||| |||||||||||||| |||||||||| || ||||||| ||||||||| || ||||| | |||||||||||||||||||||||||||||    
T  23039904 gctcattacaagattgtgaatgagcggaagactaagggtcagcagagtctccctaagccttacagtgcccctgctgataagggcaaacagaggatggtcg 23040003  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  |||||||||||||| ||||||| |||| | ||||||  || |||   |||||| ||||| |||||||| || |||| ||||| || |||    ||    
T  23040004 aaggtagacggcctaagaagaaggatgctcctacagagattgtctgtttttcttgtggtgagaagggccacaagagtaatgcttgtcctggggataccaa 23040103  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    || ||||||||| ||||| |||||||| ||   | ||||||| ||||| |||| |||||| || || || || || || |||||| |||| ||||||||     
T  23040104 gagatgtttccgatgtggaaagaagggtcatgcactagctgagtgcaaacatgatgatatagtatgttttaactgcaatgaagagcgtcacattggttca 23040203  T
Q  317 cagtgcaagcagcctaagagggcgcc 342  Q
    ||||||||| ||||||||| ||||||    
T  23040204 cagtgcaagaagcctaagaaggcgcc 23040229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 17 - 304
Target Start/End: Original strand, 21320330 - 21320617
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||| |||||||||||||| |||||| |||||| |||||| |||||||||| |||||  | | |||||||||||||||||| || |||||||    
T  21320330 gctcattacaagattgtgaatgagcggaagactaggggccagcagagttgccctaagccttatagcacccctgctgataagggcaaacaaagaatggtcg 21320429  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    |||| || ||||||||||| |||||||| ||||||||||||  || ||| ||||||||||||||||||||||| ||||||| |||||  |  || |||||    
T  21320430 aggataggcggcctaagaagaaggatgtccctgctgagattgtctgttttaattgtggcgagaaaggccacaagagcaatgcttgtccgggagaggtaaa 21320529  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggt 304  Q
     | |||||| || ||||| ||||| || || | | ||||||| || || | |  ||||||||||||||| ||||| || || ||||||    
T  21320530 aagatgttttcgctgtgggaagaaaggacatacactagctgagtgtaaacgtaatgatattgtgtgctttaattgcaacgaggagggt 21320617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 95 - 349
Target Start/End: Complemental strand, 23065451 - 23065197
Alignment:
Q  95 aagggcaaacagaggatggtcgaggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagca 194  Q
    |||||||||||||| |||||||| || || ||||||||||| ||||||| |||||| ||||||  |||||| | || ||| ||||| |||||||| |||     
T  23065451 aagggcaaacagagaatggtcgaagataggcggcctaagaagaaggatggtcctgcagagattgtctattttacttatggtgagaagggccacaagagct 23065352  T
Q  195 atgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaa 294  Q
    ||  ||||| || ||| || || | |||||| || ||||| |||||||| ||   | | ||||| ||||| |||| |||||| || ||||||||||||||    
T  23065351 attcttgtcctggggatgtcaaaagatgttttcgctgtggaaagaagggtcatgcactggctgaatgcaaacatgatgatatagtatgcttcaattgtaa 23065252  T
Q  295 ggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
     ||||||||||| |||||||| ||||||||  ||||||||| |||||||||||||    
T  23065251 tgaagagggtcacattggttcacagtgcaaaaagcctaagaaggcgccgactact 23065197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 95 - 349
Target Start/End: Complemental strand, 23074901 - 23074647
Alignment:
Q  95 aagggcaaacagaggatggtcgaggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagca 194  Q
    |||||||||||||| |||||||| || || ||||||||||| ||||||| |||||| ||||||  |||||| | || ||| ||||| |||||||| |||     
T  23074901 aagggcaaacagagaatggtcgaagataggcggcctaagaagaaggatggtcctgcagagattgtctattttacttatggtgagaagggccacaagagct 23074802  T
Q  195 atgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaa 294  Q
    ||  ||||| || ||| || || | |||||| || ||||| |||||||| ||   | | ||||| ||||| |||| |||||| || ||||||||||||||    
T  23074801 attcttgtcctggggatgtcaaaagatgttttcgctgtggaaagaagggtcatgcactggctgaatgcaaacatgatgatatagtatgcttcaattgtaa 23074702  T
Q  295 ggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
     ||||||||||| |||||||| ||||||||  ||||||||| |||||||||||||    
T  23074701 tgaagagggtcacattggttcacagtgcaaaaagcctaagaaggcgccgactact 23074647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 10871963 - 10871634
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||| || ||  |||||| ||||||||||| |||||||| || ||||| | ||||||||| || ||||||| ||||||||    
T  10871963 gctcactacaaggtagtgaatgagaggaagggtaagggacaacagagtcgtcctaagccgtacagtgcccctgctgataaagggaaacagaagatggtcg 10871864  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||| ||   | |||||||||||| |||||||||||||| ||||| || || | ||||||| | ||    
T  10871863 atgttaggcggcctaagaagaaggatg---ctgcagagcttgtgtgtttcaattgtggtgagaaaggccacaaaagcaacgtctgccctgaggaaatcaa 10871767  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||||||||| || ||  |  ||||||||||||| |     || ||||| ||||| ||||| || | ||||||||| ||| ||||     
T  10871766 gaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgattgcaatcgcacagacattgtttgctttaattgcaacggagagggtcacattagttca 10871667  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
     |||| |  ||||||||||||||||||||||||    
T  10871666 tagtgtacccagcctaagagggcgccgactact 10871634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 59 - 349
Target Start/End: Original strand, 24874122 - 24874409
Alignment:
Q  59 cagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcgaggaaagacggcctaagaataaggatgttcctgctgagatta 158  Q
    ||||||||  ||||||| || ||||| | ||||||||| || ||||||||||||||||| || || ||||||||||| ||||||||| |||   |||||     
T  24874122 cagagtcgttctaagccgtacagtgcccctgctgataaagggaaacagaggatggtcgatgataggcggcctaagaagaaggatgttactg---agattg 24874218  T
Q  159 cctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctga 258  Q
      | |||||| ||||| | |||||||||||| |||||||| || | ||| ||| | ||||||||| |||||||||||||||| || || ||  |||||||    
T  24874219 tgtgtttcaactgtggtgggaaaggccacaaaagcaatgtctgccatgaagaaattaagaaatgtgtccggtgtggcaagaaaggtcatattgtagctga 24874318  T
Q  259 ttgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
    |||||||| |   || |||||||| || || || || | ||||||||| ||| |||| ||||| |  |||||||||||||||| |||||||    
T  24874319 ttgcaagcgtacggacattgtgtgttttaactgcaatggagagggtcaaattagttcacagtgtactcagcctaagagggcgctgactact 24874409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 9338695 - 9338366
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||| || ||   ||||| || |||||||| |||||||| || ||||| |  ||||| || || ||||||| ||||||||    
T  9338695 gctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaagggaaacagaagatggtcg 9338596  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||||||   | |||||||||||| |||||||||||||| ||||| || || | ||||||| | ||    
T  9338595 atgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgagaaaggccacaagagcaacgtctgccctgaggaaatcaa 9338499  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||| |||||||| ||  |  ||||||||||||| | |   || ||||| ||||| ||||| || | ||||||||| ||| ||||     
T  9338498 gaagtgtgtccggtgtggtaagaagggtcatgttgtagctgattgcaaccgtacagacattgtttgctttaattgcaatggagagggtcacattagttca 9338399  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  9338398 cagtgtactcagcctaagagggcgccgactact 9338366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 9487329 - 9487000
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||| || ||   ||||| || |||||||| |||||||| || ||||| |  ||||| || || ||||||| ||||||||    
T  9487329 gctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaagggaaacagaagatggtcg 9487230  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||||||   | |||||||||||| |||||||||||||| ||||| || || | ||||||| | ||    
T  9487229 atgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgagaaaggccacaagagcaacgtctgccctgaggaaatcaa 9487133  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||| |||||||| ||  |  ||||||||||||| | |   || ||||| ||||| ||||| || | ||||||||| ||| ||||     
T  9487132 gaagtgtgtccggtgtggtaagaagggtcatgttgtagctgattgcaaccgtacagacattgtttgctttaattgcaatggagagggtcacattagttca 9487033  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  9487032 cagtgtactcagcctaagagggcgccgactact 9487000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 22322672 - 22323001
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||  || ||   ||||| || |||||||| |||||||| || ||||| |  ||||| || || ||||||| ||||||||    
T  22322672 gctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaaggtaaacagaagatggtcg 22322771  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||||||   | |||||||||||| |||||||||||||| ||||| || || | ||||||| | ||    
T  22322772 atgttaggcggcctaagaagaaggatg---ctgcggagattgtgtgtttcaattgtggtgagaaaggccacaaaagcaacgtctgccctgaggaaatcaa 22322868  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||||||||| || ||  |  ||||||||||||| | |   || ||||||||||| ||||| || | ||||||||| ||| ||||     
T  22322869 gaagtgtgtccggtgtggcaagaaaggtcatgttatagctgattgcaatcgtacagacattgtgtgctttaattgcaatggagagggtcacattagttca 22322968  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  22322969 cagtgtactcagcctaagagggcgccgactact 22323001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 24265483 - 24265154
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||| |  ||   ||||| || |||||||| |||||||| || ||||| | ||||||||| || ||| ||| ||||||||    
T  24265483 gctcactacaaggtagtgaatgagagaaagggcaagggacagcagagtcgtcctaagccgtacagtgcccctgctgataaagggaaatagaagatggtcg 24265384  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||||||   | |||||||||||| |||||||||||||| ||||| || || | ||||||| | ||    
T  24265383 atgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgagaaaggccacaaaagcaacgtctgccctgaggaaatcaa 24265287  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||||||||| || ||  |  ||||||||||||| | |   ||  |||||||||| ||||| || | ||||||||| ||| ||||     
T  24265286 gaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtacggacgttgtgtgctttaattgcaacggagagggtcacattagttca 24265187  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  24265186 cagtgtactcagcctaagagggcgccgactact 24265154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 50 - 349
Target Start/End: Complemental strand, 24713114 - 24712818
Alignment:
Q  50 aagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcgaggaaagacggcctaagaataaggatgttcctg 149  Q
    ||||| || |||||||| |||||||| || ||||| |  ||||| || || ||||||| ||||||||| |  || ||||||||||| |||||||   |||    
T  24713114 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaaggtaaacagaagatggtcgatgttaggcggcctaagaagaaggatg---ctg 24713018  T
Q  150 ctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacat 249  Q
    | ||||||   | |||||||||||| |||||||||||||| ||||| || || | ||||||| | ||||| ||| |||||||||||||||| || ||  |    
T  24713017 cagagattgtgtgtttcaattgtggtgagaaaggccacaaaagcaacgtctgccctgaggaaatcaagaagtgtgtccggtgtggcaagaaaggtcatgt 24712918  T
Q  250 attagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
      ||||||||||||| | |   || ||||||||||| ||||| || | ||||||||| ||| |||| ||||| |  ||||||||||||||||||||||||    
T  24712917 tgtagctgattgcaatcgtacagacattgtgtgctttaattgcaatggagagggtcacattagttcacagtgtactcagcctaagagggcgccgactact 24712818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 17002113 - 17001784
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||  || ||   ||||| || |||||||| |||||||| || ||||| | ||||||||| || ||||||| ||||||||    
T  17002113 gctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccctgctgataaaggaaaacagaagatggtcg 17002014  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||||||   |  |||||||||||||||||||||||||| ||||| |  |||| ||||||| | ||    
T  17002013 atgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgcttcaattgtggcgagaaaggccacaagagcaacgcctgtcctgaggaaatcaa 17001917  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||| |||||||| ||  |  | ||||||||||| | |   || ||||| ||||| ||||| || | ||||||||| ||| ||||     
T  17001916 gaagtgtgtccggtgtggtaagaagggtcatgtggtggctgattgcaaccgtacagacattgtttgctttaattgcaacggagagggtcacattagttca 17001817  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
     |||| |  ||||||||||||||||||||||||    
T  17001816 tagtgtactcagcctaagagggcgccgactact 17001784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 20321096 - 20320956
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||| | |||||||||||| |||||||||| || ||||||| ||||||||| |||||||| | |||||||||||| |||||||  |||||||    
T  20321096 gctcattacaagatcgtgaatgagcggaagactaagggtcagcagagtcaccctaagccttatagtgcccctgctgataagggaaaacagataatggtcg 20320997  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagatt 157  Q
    | || |||||||| ||||| || |||| | |||||||||||    
T  20320996 aagatagacggccgaagaagaatgatgcttctgctgagatt 20320956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 16984353 - 16984024
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||  || ||   ||||| || |||||||| |||||||| || ||||| |  ||||| || || ||||||| ||||||||    
T  16984353 gctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaagggaaacagaagatggtcg 16984254  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| ||| |||   |||| ||||||   | |||||||||||| |||||||||||||| ||||| || || | ||||||| | ||    
T  16984253 atgttaggcggcctaagaagaagaatg---ctgcagagattgtgtgtttcaattgtggtgagaaaggccacaagagcaacgtctgccctgaggaaatcaa 16984157  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||| |||||||| ||  |  ||||||||||||| | |   || ||||| ||||| ||||| || | ||||||||| ||| ||||     
T  16984156 gaagtgtgtccggtgtggtaagaagggtcatgttgtagctgattgcaaccgtacagacattgtttgctttaattgcaatggagagggtcacattagttca 16984057  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  16984056 cagtgtactcagcctaagagggcgccgactact 16984024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 348
Target Start/End: Original strand, 44382900 - 44383228
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||| || ||   ||||| || |||||||| |||||||| || ||||| |  ||||| ||||| ||||||| ||||||||    
T  44382900 gctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaggggaaacagaagatggtcg 44382999  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| ||||||||   ||| ||||||   |  ||||||||||| |||||||||||||| |||||||  || | ||||||| | ||    
T  44383000 atgttaggcggcctaagaagaaggatgt---tgcagagattgtgtgcttcaattgtggtgagaaaggccacaagagcaatgcctgccctgaggaaatcaa 44383096  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||| ||||| || ||  |  ||||||||||||| | |   ||  |||||||||| ||||| || | ||||||||| ||| ||||     
T  44383097 gaagtgtgtccggtgtggtaagaaaggtcatgttgtagctgattgcaatcgtacggacgttgtgtgctttaattgcaatggagagggtcacattagttca 44383196  T
Q  317 cagtgcaagcagcctaagagggcgccgactac 348  Q
    ||||| |  |||||||||||||||| ||||||    
T  44383197 cagtgtactcagcctaagagggcgctgactac 44383228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 101 - 349
Target Start/End: Original strand, 21139395 - 21139640
Alignment:
Q  101 aaacagaggatggtcgaggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgttt 200  Q
    ||||||||||||||||| || || ||||||||||| |||||||   || | ||||||   | |||||||||||| |  ||||||||||| |||||||| |    
T  21139395 aaacagaggatggtcgatgataggcggcctaagaagaaggatg---ctacagagattgtgtgtttcaattgtggtggaaaaggccacaaaagcaatgtct 21139491  T
Q  201 gtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaaga 300  Q
    ||| ||| ||  | |||||  || ||||||||||||||||||| || ||  ||||||||||||||| ||  || |||||||| || || || || | |||    
T  21139492 gtcgtgaagagatcaagaaccgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtgaagacattgtgtgttttaactgcaatggaga 21139591  T
Q  301 gggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
    |||||| ||| |||| ||||| |  |||||||| |||||||||||||||    
T  21139592 gggtcacattagttcacagtgtactcagcctaatagggcgccgactact 21139640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 59 - 349
Target Start/End: Complemental strand, 27374340 - 27374053
Alignment:
Q  59 cagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcgaggaaagacggcctaagaataaggatgttcctgctgagatta 158  Q
    |||||||| |||||||| || ||||| |  ||||| || || ||||||| ||||||||| |  || ||||||||||| |||||||   |||| ||||||     
T  27374340 cagagtcgtcctaagccgtacagtgcccccgctgacaaagggaaacagaagatggtcgatgttaggcggcctaagaagaaggatg---ctgcagagattg 27374244  T
Q  159 cctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctga 258  Q
      |  ||||||||||| |||||||||||||| ||||| |  |||| ||||||| | ||||| ||| |||||||||| ||||| || ||  |  |||||||    
T  27374243 tgtgcttcaattgtggtgagaaaggccacaagagcaacgcctgtcctgaggaaatcaagaagtgtgtccggtgtggtaagaaaggtcatgtggtagctga 27374144  T
Q  259 ttgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
    |||||| | |   || ||||| ||||| ||||| || | ||||||||| ||| |||| ||||| |  ||||||||||||||||||||||||    
T  27374143 ttgcaatcgtacagacattgtttgctttaattgcaacggagagggtcacattagttcacagtgtactcagcctaagagggcgccgactact 27374053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 335
Target Start/End: Complemental strand, 28350756 - 28350673
Alignment:
Q  252 tagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaaga 335  Q
    ||||||| ||||||| |||||||||||| |||||||||||| | ||||| |||||| |  |||| ||||||||| |||||||||    
T  28350756 tagctgaatgcaagcgtggtgatattgtttgcttcaattgtgacgaagaaggtcatctcagttcgcagtgcaagaagcctaaga 28350673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 23029877 - 23029819
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagcc 75  Q
    |||||||||||| |||||||||||||| |||| | ||| ||||||||||| ||||||||    
T  23029877 gctcattacaagattgtgaatgagcggaagaccaggggacaacagagtcgtcctaagcc 23029819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 323
Target Start/End: Complemental strand, 12577316 - 12577163
Alignment:
Q  170 tgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatg 269  Q
    |||||||||||||| ||||| || || ||||||    |||| |  ||||| |||||| | |||||  ||||||| |||||  |||| ||||||||||  |    
T  12577316 tgtggcgagaaaggtcacaagagtaacgtttgtaccaaggatgagaagaagtgtttcagatgtggacagaagggtcacatgctagccgattgcaagcgcg 12577217  T
Q  270 gtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgca 323  Q
    ||||| |||| ||||  |||||||| ||||||||||| ||  || |||||||||    
T  12577216 gtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgca 12577163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 21901418 - 21901378
Alignment:
Q  252 tagctgattgcaagcatggtgatattgtgtgcttcaattgt 292  Q
    ||||||| ||||||| |||||||||||| ||||||||||||    
T  21901418 tagctgaatgcaagcgtggtgatattgtttgcttcaattgt 21901378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 214; Significance: 1e-117; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 7 - 348
Target Start/End: Original strand, 27558891 - 27559232
Alignment:
Q  7 ggacatcaaagctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacag 106  Q
    ||||| || |||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||    
T  27558891 ggacaccagagctcattacaaggttgttaatgagcggaagactaagggccagcagagtcgccctaagccctatagtgcccctgctgataagggcaaacag 27558990  T
Q  107 aggatggtcgaggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttg 206  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||| | |||||||||||| |||||||||||||| || | |||||||| ||    
T  27558991 aggatggtcgaggaaagacggcctaagaaaaagcatgttcctgctgagattacttgtttcaattgtggtgagaaaggccacaagagtactgtttgtcctg 27559090  T
Q  207 aggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtca 306  Q
    |||| || ||||| ||||||||||||||||||||||| |||| ||||||||| |||||||||| ||| || |||||||| ||||| || || ||||||||    
T  27559091 aggaggtgaagaagtgtttccggtgtggcaagaagggtcacacattagctgactgcaagcatgctgacatcgtgtgctttaattgcaaagaggagggtca 27559190  T
Q  307 tattggttctcagtgcaagcagcctaagagggcgccgactac 348  Q
    ||||||||| || ||||||||||||||||||||||| |||||    
T  27559191 tattggttcccaatgcaagcagcctaagagggcgcctactac 27559232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 16 - 348
Target Start/End: Original strand, 25756546 - 25756878
Alignment:
Q  16 agctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtc 115  Q
    ||||||||||||||| || ||||| ||| ||||||||||||| |||||||||||||||||||||||||| || | |||||||||||||||||| ||||||    
T  25756546 agctcattacaaggtggttaatgaccggaagactaagggccagcagagtcgccctaagccctatagtgccctagttgataagggcaaacagagaatggtc 25756645  T
Q  116 gaggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaa 215  Q
    || || || ||||||||||| ||||||| |||||| ||||||  || ||| |||||||| ||||||||||||||  ||||||||| ||  || ||  |||    
T  25756646 gatgataggcggcctaagaagaaggatgctcctgcggagattgtctgttttaattgtggtgagaaaggccacaagtgcaatgtttttccagaagagataa 25756745  T
Q  216 agaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttc 315  Q
    |||||||| ||||||| ||||||||||| || ||| ||||||||||||||| |  ||||||||||||||||||||| || || |||||||||||||||||    
T  25756746 agaaatgtgtccggtgcggcaagaagggtcatatagtagctgattgcaagcgtaatgatattgtgtgcttcaattgcaatgaggagggtcatattggttc 25756845  T
Q  316 tcagtgcaagcagcctaagagggcgccgactac 348  Q
     || ||||| ||||||||||||||||| |||||    
T  25756846 ccaatgcaaacagcctaagagggcgcctactac 25756878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 22437218 - 22436886
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||| |||||||||||||  ||||||||||||| ||||||||||||||||| ||||| || | ||||||||||| |||| ||||||||||||    
T  22437218 gctcattacaagattgtgaatgagcgaaagactaagggccagcagagtcgccctaagccttatagcgcccctgctgataaggccaaatagaggatggtcg 22437119  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || ||||||||||| |||||||||||||||||||||  ||  || |||||||| |||||||||||||| ||||||| |||||  |  || |||||    
T  22437118 atgataggcggcctaagaagaaggatgttcctgctgagattgtctgctttaattgtggtgagaaaggccacaagagcaatgcttgtccgggtgaggtaaa 22437019  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    || ||||||||| ||||| |||||||| ||   | ||||||| ||||| | |  ||| |||||||||||||||||||| ||||| ||||| |||||||||    
T  22437018 gagatgtttccgatgtggtaagaagggtcatgcactagctgagtgcaaacgtaatgacattgtgtgcttcaattgtaatgaagatggtcacattggttct 22436919  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||||||||||||||||| |||||||||||||    
T  22436918 cagtgcaagcagcctaagaaggcgccgactact 22436886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 7 - 220
Target Start/End: Complemental strand, 21765171 - 21764958
Alignment:
Q  7 ggacatcaaagctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacag 106  Q
    ||||| |||||||||||||||||||||||||||| || | ||| ||||||| |||||||||||||||||||||||||| | |||||||||||||||  ||    
T  21765171 ggacaccaaagctcattacaaggttgtgaatgagtggaacactgagggccagcagagtcgccctaagccctatagtgcccctgctgataagggcaattag 21765072  T
Q  107 aggatggtcgaggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttg 206  Q
    || |||||||| || || ||||||||||| ||||||| |||||| ||||||  || |||||||||||| |||||||||||||| |||||||||||||  |    
T  21765071 agaatggtcgatgataggcggcctaagaagaaggatgctcctgcggagattgtctgtttcaattgtggtgagaaaggccacaagagcaatgtttgtccag 21764972  T
Q  207 aggaagtaaagaaa 220  Q
    |||| |||||||||    
T  21764971 aggaggtaaagaaa 21764958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 13 - 349
Target Start/End: Original strand, 5836159 - 5836492
Alignment:
Q  13 caaagctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatg 112  Q
    ||||||||| ||||||  ||||||||||||| ||   ||||| ||||||||||| |||||||| |||||||| | ||||||||| || ||||||||||||    
T  5836159 caaagctcactacaagactgtgaatgagcggaagggcaagggacaacagagtcgtcctaagccgtatagtgcccctgctgataaagggaaacagaggatg 5836258  T
Q  113 gtcgaggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaag 212  Q
    ||||| || || || || ||||| |||||||   |||||||||||   | |||||| ||||| | |||||||||| | |||||||||||||  || ||      
T  5836259 gtcgatgataggcgacccaagaagaaggatg---ctgctgagattgtgtgtttcaactgtggtgggaaaggccacgaaagcaatgtttgtccagaagaga 5836355  T
Q  213 taaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattgg 312  Q
    | ||||||||| ||||||||||||||||||| || ||  |||| |||||||||| |   || |||||||| || || || || ||||||||||| ||| |    
T  5836356 tcaagaaatgtgtccggtgtggcaagaagggtcatattgtagccgattgcaagcgtaaggacattgtgtgttttaactgcaacgaagagggtcacattag 5836455  T
Q  313 ttctcagtgcaagcagcctaagagggcgccgactact 349  Q
    ||| ||||| |  ||||||||||||||||||||||||    
T  5836456 ttcacagtgtactcagcctaagagggcgccgactact 5836492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 88 - 349
Target Start/End: Original strand, 18404947 - 18405208
Alignment:
Q  88 tgctgataagggcaaacagaggatggtcgaggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccac 187  Q
    ||||||||||||||||||||| |||||||| || || |||||||| || ||||||| ||||||  |||||  || ||||| |||||| ||||||||||||    
T  18404947 tgctgataagggcaaacagagaatggtcgaagataggcggcctaacaagaaggatgctcctgcaaagattgtctgtttcacttgtggtgagaaaggccac 18405046  T
Q  188 aacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttca 287  Q
    || || |||| ||||| || ||| || ||||  ||||| || ||||| |||||||| ||   | ||||||| ||||| ||||  ||||| || |||||||    
T  18405047 aagagtaatgcttgtcctggggatgttaagaggtgttttcgctgtggtaagaagggtcatgcactagctgagtgcaaacatgaggatatagtatgcttca 18405146  T
Q  288 attgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
    |||| || ||||| ||||| |||||||||||||||||| ||||||||| |||| ||||||||    
T  18405147 attgcaatgaagaaggtcacattggttctcagtgcaagaagcctaagaaggcgtcgactact 18405208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 27205968 - 27205639
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||| || ||  |||||| || |||||||| |||||||| || |||||||  || ||||| || ||||| | ||||||||    
T  27205968 gctcactacaaggtagtgaatgagaggaagggtaagggacagcagagtcgtcctaagccgtacagtgctcccgccgataaagggaaacaaaagatggtcg 27205869  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||||||   | |||||||||||| |||||||||||||| ||||| |  || | ||||||| | ||    
T  27205868 atgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgagaaaggccacaagagcaacgcctgccctgaggaaatcaa 27205772  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||| ||||| || ||  |  ||||||||||||| | |   || ||||||||||||||||| || | ||||||||||||| |||||    
T  27205771 gaagtgtgtccggtgtggtaagaaaggtcatgttgtagctgattgcaatcgttcggacattgtgtgcttcaattgcaatggagagggtcatattagttct 27205672  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  27205671 cagtgtactcagcctaagagggcgccgactact 27205639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 27243260 - 27243589
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||| || ||  |||||| || |||||||| |||||||| || |||||||  || ||||| || ||||| | ||||||||    
T  27243260 gctcactacaaggtagtgaatgagaggaagggtaagggacagcagagtcgtcctaagccgtacagtgctcccgccgataaagggaaacaaaagatggtcg 27243359  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||||||   | |||||||||||| |||||||||||||| ||||| |  || | ||||||| | ||    
T  27243360 atgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgagaaaggccacaagagcaacgcctgccctgaggaaatcaa 27243456  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||| ||||| || ||  |  ||||||||||||| | |   || ||||||||||||||||| || | ||||||||||||| |||||    
T  27243457 gaagtgtgtccggtgtggtaagaaaggtcatgttgtagctgattgcaatcgttcggacattgtgtgcttcaattgcaatggagagggtcatattagttct 27243556  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  27243557 cagtgtactcagcctaagagggcgccgactact 27243589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 24292717 - 24293046
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||  || ||   ||||| || |||||||| |||||||| || ||||| |  |||||||| || ||||||| ||||||||    
T  24292717 gctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgataaagggaaacagaagatggtcg 24292816  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    |||  || ||||||||||| |||||||   |||| ||||||   | ||||||||||||||||||||||||||| ||||| |  || | ||||||| | ||    
T  24292817 aggttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggcgagaaaggccacaagagcaacgcctgccctgaggaaatcaa 24292913  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||||||||| || ||  |  ||||||||||||| | |   || ||||||||||| ||||| || | ||||||||| ||| ||||     
T  24292914 gaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtacagacattgtgtgctttaattgcaatggagagggtcacattagttca 24293013  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  24293014 cagtgtactcagcctaagagggcgccgactact 24293046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 19868005 - 19867869
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||||| ||||||||| || ||||||||||||| ||||||||||||||||| ||||| || | ||||||||||||||||||||| |||||||    
T  19868005 gctcattacaaggtcgtgaatgagtggcagactaagggccagcagagtcgccctaagccttatagagcccctgctgataagggcaaacagagaatggtcg 19867906  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctga 153  Q
    | || |||||||| | ||| || ||||||||||||||    
T  19867905 aagatagacggccgaggaagaaagatgttcctgctga 19867869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 50 - 349
Target Start/End: Complemental strand, 25115865 - 25115569
Alignment:
Q  50 aagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcgaggaaagacggcctaagaataaggatgttcctg 149  Q
    ||||| || |||||||| |||||||| || ||||| | ||||||||| || |||||||| |||||||| || || | ||||||||| |||||||   ||     
T  25115865 aagggacagcagagtcgtcctaagccgtacagtgcccctgctgataaagggaaacagagaatggtcgatgataggcagcctaagaagaaggatg---cta 25115769  T
Q  150 ctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacat 249  Q
    ||||||||   | |||||||||||| | |||||||||||| |||||||| || | ||||||| | ||||| ||| | |||||||||||||| || || ||    
T  25115768 ctgagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtctgccctgaggaaatcaagaagtgtgttcggtgtggcaagaaaggtcatat 25115669  T
Q  250 attagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
      ||||||||||||| | |   ||||||||||| || || || || | ||||||||| ||| |||| ||||| |  ||||||||||||||||||||||||    
T  25115668 tgtagctgattgcaatcgtacggatattgtgtgttttaactgcaatggagagggtcacattagttcacagtgtactcagcctaagagggcgccgactact 25115569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 50 - 349
Target Start/End: Original strand, 22829354 - 22829650
Alignment:
Q  50 aagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcgaggaaagacggcctaagaataaggatgttcctg 149  Q
    ||||| ||||||||||| |||||||| || ||||| | ||||||||| || ||| |||| |||||||| || || ||||||||||| |||||||   ||     
T  22829354 aagggacaacagagtcgtcctaagccgtacagtgcccctgctgataaagggaaatagagaatggtcgatgataggcggcctaagaagaaggatg---cta 22829450  T
Q  150 ctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacat 249  Q
    ||||||||   | |||||||||||| |  ||||||||||| |||||||| |||| ||| ||  | ||||| ||| || |||||||||||||||| || ||    
T  22829451 ctgagattgtgtgtttcaattgtggtggaaaaggccacaaaagcaatgtctgtcctgaagagatcaagaagtgtgtctggtgtggcaagaagggtcatat 22829550  T
Q  250 attagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
      ||||||||||||||| |   || |||||||| || || || || | ||||||||| ||| |||| | ||| |  ||||||||||||||||||||||||    
T  22829551 tgtagctgattgcaagcgtaaggacattgtgtgttttaactgcaatggagagggtcacattagttcaccgtgtactcagcctaagagggcgccgactact 22829650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 29589374 - 29589703
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||| || ||   ||||| || |||||||| |||||||| || ||||| |   |||| || || ||||||| ||||||||    
T  29589374 gctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccactgacaaagggaaacagaagatggtcg 29589473  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||||||   | |||||||||||| |||||||||||||| ||||| || || | ||||||| | ||    
T  29589474 atgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgagaaaggccacaagagcaacgtctgccctgaggaaatcaa 29589570  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||| |||||||| ||  |  ||||||||||||| | |   || ||||| ||||| ||||| || | ||||||||| ||| ||||     
T  29589571 gaagtgtgtccggtgtggtaagaagggtcatgttgtagctgattgcaaccgtacagacattgtttgctttaattgcaatggagagggtcacattagttca 29589670  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  29589671 cagtgtactcagcctaagagggcgccgactact 29589703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 212 - 349
Target Start/End: Complemental strand, 19867841 - 19867704
Alignment:
Q  212 gtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattg 311  Q
    ||||||| |||||| || ||||| |||||||| ||   | ||||||| ||||| |||  ||||||||||||||||||||| || ||||||||||| ||||    
T  19867841 gtaaagagatgttttcgctgtggtaagaagggtcatgcactagctgagtgcaaacataatgatattgtgtgcttcaattgcaatgaagagggtcacattg 19867742  T
Q  312 gttctcagtgcaagcagcctaagagggcgccgactact 349  Q
    |||| ||||| ||||||||||||| |||||||||||||    
T  19867741 gttcgcagtgtaagcagcctaagaaggcgccgactact 19867704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 2871737 - 2872066
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||| | ||||||||| || ||   ||||| ||||||||||| |||||||  || ||||| | ||||||||| || ||||||| ||||||||    
T  2871737 gctcactacaagatagtgaatgagaggaagggcaagggacaacagagtcgtcctaagctgtacagtgcccctgctgataaagggaaacagaagatggtcg 2871836  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   || | ||||||   | |||||||||||| | |||||||||||| ||||| || || | ||||||| | ||    
T  2871837 atgttaggcggcctaagaagaaggatg---ctacagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaacgtctgccctgaggaaatcaa 2871933  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||||||||| || ||  |  ||||||| |||||   |   || ||||||||||| ||||| || | ||||||||| ||| ||||     
T  2871934 gaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgactgcaattgtacggacattgtgtgctttaattgcaatggagagggtcacattagttca 2872033  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  |||||||||||||| |||||||||    
T  2872034 cagtgtactcagcctaagagggcaccgactact 2872066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 28312976 - 28312647
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||  || ||  |||||| || |||||||| |||||||| || ||||| |  ||||| || || ||||||| ||||||||    
T  28312976 gctcactacaaggtagtgaatgaaaggaagggtaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaaggtaaacagaagatggtcg 28312877  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||||||   |  ||||||||||| |||||||||||||| ||||| |  |||   |||||| | ||    
T  28312876 atgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgcttcaattgtggtgagaaaggccacaagagcaacgcctgttccgaggaaatcaa 28312780  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| |||  ||||||||||||||| || ||  || ||||||||||||| | |   || ||||||||||| ||||| || | ||| ||||| ||| |||||    
T  28312779 gaagtgtgcccggtgtggcaagaaaggtcatgtagtagctgattgcaatcgtacagacattgtgtgctttaattgcaatggagaaggtcacattagttct 28312680  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||| ||||||||||||||||||    
T  28312679 cagtgtactcagccgaagagggcgccgactact 28312647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 215 - 323
Target Start/End: Complemental strand, 21474751 - 21474643
Alignment:
Q  215 aagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggtt 314  Q
    ||||| |||||||| ||||| ||||| || |||| ||| ||||| ||||||| ||||||||||||||||| ||||||| | ||||||||||||||| |||    
T  21474751 aagaagtgtttccgatgtgggaagaaaggacacacattggctgagtgcaagcgtggtgatattgtgtgctacaattgtgatgaagagggtcatattagtt 21474652  T
Q  315 ctcagtgca 323  Q
    |||||||||    
T  21474651 ctcagtgca 21474643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 16575236 - 16574907
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||  || ||   ||||| || |||||||| |||||||| || ||||| |  ||||| || || ||||||| ||||||||    
T  16575236 gctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaagggaaacagaagatggtcg 16575137  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||||||   |  ||||||||||| |||||||||||||| ||||| |  |||| ||||||| | ||    
T  16575136 atgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgcttcaattgtggtgagaaaggccacaagagcaacgcctgtcctgaggaaatcaa 16575040  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||| ||||| || ||  |  | ||||||||||| | |   || ||||| ||||| ||||| || | ||||||||| ||| ||||     
T  16575039 gaagtgtgtccggtgtggtaagaaaggtcatgtggtggctgattgcaatcgtacagacattgtttgctttaattgcaacggagagggtcacattagttca 16574940  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  16574939 cagtgtactcagcctaagagggcgccgactact 16574907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 16620144 - 16620473
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||  || ||   ||||| || |||||||| |||||||| || ||||| |  ||||| || || ||||||| ||||||||    
T  16620144 gctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaagggaaacagaagatggtcg 16620243  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||||||   |  ||||||||||| |||||||||||||| ||||| |  |||| ||||||| | ||    
T  16620244 atgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgcttcaattgtggtgagaaaggccacaagagcaacgcctgtcctgaggaaatcaa 16620340  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||| ||||| || ||  |  | ||||||||||| | |   || ||||| ||||| ||||| || | ||||||||| ||| ||||     
T  16620341 gaagtgtgtccggtgtggtaagaaaggtcatgtggtggctgattgcaatcgtacagacattgtttgctttaattgcaacggagagggtcacattagttca 16620440  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  16620441 cagtgtactcagcctaagagggcgccgactact 16620473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 323
Target Start/End: Complemental strand, 25770995 - 25770887
Alignment:
Q  215 aagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggtt 314  Q
    ||||| ||||| || ||||| | ||| || |||| |||| |||||||||||| ||||||||||||||||| ||||||| | ||||| ||||||||| | |    
T  25770995 aagaagtgttttcgatgtgggacgaaaggacacacattatctgattgcaagcgtggtgatattgtgtgctacaattgtgatgaagaaggtcatattagct 25770896  T
Q  315 ctcagtgca 323  Q
    |||||||||    
T  25770895 ctcagtgca 25770887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 349
Target Start/End: Complemental strand, 23081620 - 23081440
Alignment:
Q  169 ttgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcat 268  Q
    |||||| |||||||||||||| || |||| ||||| || ||| || || | |||||| || ||||| ||||| || || | | | | |||||| || |||    
T  23081620 ttgtggtgagaaaggccacaagagtaatgcttgtcctggggacgtgaaaagatgttttcgttgtggaaagaaagggcatacacttgttgattgtaaacat 23081521  T
Q  269 ggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
    | |||||||||||| |||||||| || ||  | ||||| |||||||| |||| |||| ||||||||| ||||| |||||||    
T  23081520 gatgatattgtgtgtttcaattgcaatgagaaaggtcacattggttcgcagtacaagaagcctaagaaggcgcagactact 23081440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 260 - 335
Target Start/End: Original strand, 19486469 - 19486544
Alignment:
Q  260 tgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaaga 335  Q
    |||||||||||||||||||| |||||||||||| | ||||| |||||| || |||| ||||||| | |||||||||    
T  19486469 tgcaagcatggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaagcctaaga 19486544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 263 - 349
Target Start/End: Original strand, 23085003 - 23085089
Alignment:
Q  263 aagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||||| |||| ||||||| || ||||| || ||||||| |||||||||||| ||||||||| |||||| || ||||| |||||||    
T  23085003 aagcatgatgatgttgtgtgttttaattgaaatgaagaggttcatattggttcgcagtgcaagaagcctatgaaggcgcagactact 23085089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 49 - 349
Target Start/End: Original strand, 28260164 - 28260461
Alignment:
Q  49 taagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcgaggaaagacggcctaagaataaggatgttcct 148  Q
    |||||| || |||||||| |||||||| || ||||| |  ||||| || || ||||||| ||||||||| |  || ||||||||||| |||||||   ||    
T  28260164 taaggggcagcagagtcgtcctaagccgtacagtgcccccgctgacaaagggaaacagaagatggtcgatgttaggcggcctaagaagaaggatg---ct 28260260  T
Q  149 gctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccaca 248  Q
    || ||||||   |  ||||||||||| | |||||||||||| ||||| |  ||||  || ||| | ||||| ||| |||||||||| ||||  || ||      
T  28260261 gcagagattgtgtgcttcaattgtggtgggaaaggccacaagagcaacgcctgtcccgaagaaatcaagaagtgtgtccggtgtggtaagagaggtcatg 28260360  T
Q  249 tattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactac 348  Q
    |  ||||||||||||| |     || ||||||||||| || || || | ||||||||| ||| |||||||||| |  ||||| |||||||||||||||||    
T  28260361 ttgtagctgattgcaatcgcacggacattgtgtgctttaactgcaatggagagggtcacattagttctcagtgtactcagccgaagagggcgccgactac 28260460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 49 - 349
Target Start/End: Complemental strand, 28285752 - 28285455
Alignment:
Q  49 taagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcgaggaaagacggcctaagaataaggatgttcct 148  Q
    |||||| || |||||||| |||||||| || ||||| |  ||||| || || ||||||| ||||||||| |  || ||||||||||| |||||||   ||    
T  28285752 taaggggcagcagagtcgtcctaagccgtacagtgcccccgctgacaaagggaaacagaagatggtcgatgttaggcggcctaagaagaaggatg---ct 28285656  T
Q  149 gctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccaca 248  Q
    || ||||||   |  ||||||||||| | |||||||||||| ||||| |  ||||  || ||| | ||||| ||| |||||||||| ||||  || ||      
T  28285655 gcagagattgtgtgcttcaattgtggtgggaaaggccacaagagcaacgcctgtcccgaagaaatcaagaagtgtgtccggtgtggtaagagaggtcatg 28285556  T
Q  249 tattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactac 348  Q
    |  ||||||||||||| |     || ||||||||||| || || || | ||||||||| ||| |||||||||| |  ||||| |||||||||||||||||    
T  28285555 ttgtagctgattgcaatcgcacggacattgtgtgctttaactgcaatggagagggtcacattagttctcagtgtactcagccgaagagggcgccgactac 28285456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 49 - 349
Target Start/End: Original strand, 28338913 - 28339210
Alignment:
Q  49 taagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcgaggaaagacggcctaagaataaggatgttcct 148  Q
    |||||| || |||||||| |||||||| || ||||| |  ||||| || || ||||||| ||||||||| |  || ||||||||||| |||||||   ||    
T  28338913 taaggggcagcagagtcgtcctaagccgtacagtgcccccgctgacaaagggaaacagaagatggtcgatgttaggcggcctaagaagaaggatg---ct 28339009  T
Q  149 gctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccaca 248  Q
    || ||||||   |  ||||||||||| | |||||||||||| ||||| |  ||||  || ||| | ||||| ||| |||||||||| ||||  || ||      
T  28339010 gcagagattgtgtgcttcaattgtggtgggaaaggccacaagagcaacgcctgtcccgaagaaatcaagaagtgtgtccggtgtggtaagagaggtcatg 28339109  T
Q  249 tattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactac 348  Q
    |  ||||||||||||| |     || ||||||||||| || || || | ||||||||| ||| |||||||||| |  ||||| |||||||||||||||||    
T  28339110 ttgtagctgattgcaatcgcacggacattgtgtgctttaactgcaatggagagggtcacattagttctcagtgtactcagccgaagagggcgccgactac 28339209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 335
Target Start/End: Complemental strand, 16813836 - 16813671
Alignment:
Q  170 tgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatg 269  Q
    ||||| |||||||||||||| || ||||||||   ||  || |  ||||| || ||||| ||||| |||||  | |||| | ||||||| ||||||| ||    
T  16813836 tgtggtgagaaaggccacaagagtaatgtttgcaatggtgaggagaagaagtgcttccgatgtgggaagaaatggcacacaatagctgaatgcaagcgtg 16813737  T
Q  270 gtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaaga 335  Q
    |||||||||| || ||||||||| | ||||| |||||| ||  ||| ||||||||| |||||||||    
T  16813736 gtgatattgtttgtttcaattgtgatgaagaaggtcatcttacttcacagtgcaagaagcctaaga 16813671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 21566920 - 21567005
Alignment:
Q  14 aaagctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataaggg 99  Q
    |||||||||||||||||  ||| |||||||  || |||||| ||||||||||| |||||||| || ||||| | |||||| |||||    
T  21566920 aaagctcattacaaggtgatgagtgagcggaggagtaagggacaacagagtcgtcctaagccgtacagtgcccctgctgacaaggg 21567005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 50 - 109
Target Start/End: Original strand, 24515379 - 24515438
Alignment:
Q  50 aagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagagg 109  Q
    ||||| ||||||||||| ||||| || |||||||||| |||||| ||||| |||||||||    
T  24515379 aagggacaacagagtcgtcctaaaccatatagtgctcctgctgacaagggaaaacagagg 24515438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 318
Target Start/End: Complemental strand, 18325969 - 18325908
Alignment:
Q  257 gattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctca 318  Q
    ||||||||||||| |||| | ||||| ||||| ||||| ||||| ||||| |||||||||||    
T  18325969 gattgcaagcatgatgatgtggtgtgtttcaactgtaatgaagaaggtcacattggttctca 18325908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 34642550 - 34642599
Alignment:
Q  50 aagggccaacagagtcgccctaagccctatagtgctcttgctgataaggg 99  Q
    ||||| ||||||||||| |||||||| |||||||||| ||||| ||||||    
T  34642550 aagggacaacagagtcgtcctaagccgtatagtgctcctgctggtaaggg 34642599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 323
Target Start/End: Original strand, 34642671 - 34642824
Alignment:
Q  170 tgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatg 269  Q
    ||||||||||| |||||||| || |||||||||    | || |  ||||| || ||| |||||||  ||||||| ||| | ||||||||||| || | ||    
T  34642671 tgtggcgagaagggccacaaaagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggacagaagggtcacgtgttagctgattgtaaacgtg 34642770  T
Q  270 gtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgca 323  Q
    |||||||||| |||| ||| || || |  |||||||||||  ||||||||||||    
T  34642771 gtgatattgtatgctacaactgcaatggggagggtcatatcagttctcagtgca 34642824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 206; Significance: 1e-112; HSPs: 4)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 7 - 348
Target Start/End: Original strand, 16846 - 17187
Alignment:
Q  7 ggacatcaaagctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacag 106  Q
    ||||| || |||||||||||||||||| ||||||||| ||||||||||||| |||||| |||||||||| |||||||| | |||||||||||||||||||    
T  16846 ggacaccagagctcattacaaggttgttaatgagcggaagactaagggccagcagagtagccctaagccatatagtgcccctgctgataagggcaaacag 16945  T
Q  107 aggatggtcgaggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttg 206  Q
    |||||||||||||| | ||| |||||||| ||||||||||||||||||||||| | |||||||||||| |||||||||||||| |||| ||||||||  |    
T  16946 aggatggtcgaggagaaacgacctaagaaaaaggatgttcctgctgagattacttgtttcaattgtggtgagaaaggccacaagagcactgtttgtccag 17045  T
Q  207 aggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtca 306  Q
    |||| || |||||||||||| |||||||||||||||| |||| ||||||||| ||||||||||||||||| ||||| ||||| || || |||||||||||    
T  17046 aggaggtgaagaaatgtttctggtgtggcaagaagggtcacacattagctgactgcaagcatggtgatatcgtgtgtttcaactgcaaagaagagggtca 17145  T
Q  307 tattggttctcagtgcaagcagcctaagagggcgccgactac 348  Q
    |||||| || ||||| ||||||||||||||||||||||||||    
T  17146 tattgggtcccagtgtaagcagcctaagagggcgccgactac 17187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 21 - 157
Target Start/End: Original strand, 194662 - 194798
Alignment:
Q  21 attacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcgagga 120  Q
    |||||||| |||| ||||| ||| ||||||||||||| ||||||||||||||||| |||||||| | ||||||||||||||||||||| |||||||| ||    
T  194662 attacaagattgtaaatgaacggaagactaagggccagcagagtcgccctaagccttatagtgcccctgctgataagggcaaacagagaatggtcgatga 194761  T
Q  121 aagacggcctaagaataaggatgttcctgctgagatt 157  Q
     || |||||||||||||||||||| ||||||||||||    
T  194762 taggcggcctaagaataaggatgtccctgctgagatt 194798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 21368 - 21425
Alignment:
Q  7 ggacatcaaagctcattacaaggttgtgaatgagcggtagactaagggccaacagagt 64  Q
    ||||| || |||||||||||||||||| ||||||||| ||||||||||||| ||||||    
T  21368 ggacaccagagctcattacaaggttgttaatgagcggaagactaagggccagcagagt 21425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 349
Target Start/End: Original strand, 194886 - 194960
Alignment:
Q  275 attgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||||||||| ||||| ||  | |||||||| ||||||||  |||| | ||||||||||| |||||||||||||    
T  194886 attgtgtgctttaattgcaataaggagggtcacattggttcgtagtgtacgcagcctaagaaggcgccgactact 194960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 7 - 349
Target Start/End: Complemental strand, 37022 - 36680
Alignment:
Q  7 ggacatcaaagctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacag 106  Q
    ||||| ||||||||||||||||||||| ||||||||| ||||||||||||| ||||||| |||||||||||||||||| | |||||||||||||||||||    
T  37022 ggacaccaaagctcattacaaggttgtaaatgagcggaagactaagggccagcagagtctccctaagccctatagtgcccctgctgataagggcaaacag 36923  T
Q  107 aggatggtcgaggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttg 206  Q
    || |||||||| || || ||||||||||| ||||||| |||||| |||||   || |||||||||||| |||||||||||||| |||||||||||||  |    
T  36922 agaatggtcgatgataggcggcctaagaagaaggatgctcctgcggagatcgtctgtttcaattgtggtgagaaaggccacaagagcaatgtttgtccag 36823  T
Q  207 aggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtca 306  Q
    |||| || ||||||||||||||||||||||||||||| || |  |||||||||||||||| | |||||||||||||||| ||||| ||||||||||||||    
T  36822 aggaggtgaagaaatgtttccggtgtggcaagaagggtcatacgttagctgattgcaagcgtagtgatattgtgtgctttaattgcaaggaagagggtca 36723  T
Q  307 tattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
    |||||||||||| |||||||||  |||||||||||||||||||    
T  36722 tattggttctcaatgcaagcagtttaagagggcgccgactact 36680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 7 - 348
Target Start/End: Original strand, 28708 - 29049
Alignment:
Q  7 ggacatcaaagctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacag 106  Q
    ||||| || |||||||||||||||||| ||||||| | ||||||||||||| ||| || |||||||||| |||||||| | || ||||||||||||||||    
T  28708 ggacaccagagctcattacaaggttgttaatgagcagaagactaagggccagcagtgttgccctaagccatatagtgcccctgttgataagggcaaacag 28807  T
Q  107 aggatggtcgaggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttg 206  Q
    || ||||||||||| |||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||| |     
T  28808 agaatggtcgaggagagacggcctaagaagaaggatgttcctgctaagattacctgtttcaattgtggcgagaaaggccacaagagcaatgtttgtccta 28907  T
Q  207 aggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtca 306  Q
    |||| |||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||| ||| ||||| || || | |||||||||    
T  28908 aggaggtaaagaaatgtttccggtgtggcaagaagggtcacacattagctgaatgcaagcatggtgatattgcgtgtttcaactgcaaagtagagggtca 29007  T
Q  307 tattggttctcagtgcaagcagcctaagagggcgccgactac 348  Q
    ||||||||| || |||||||| || ||||||||||| |||||    
T  29008 tattggttcccaatgcaagcaaccaaagagggcgcctactac 29049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 7 - 348
Target Start/End: Complemental strand, 3388 - 3047
Alignment:
Q  7 ggacatcaaagctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacag 106  Q
    ||||| || |||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||| |||||||| | |||||||||||||||||||    
T  3388 ggacaccagagctcattacaaggttgttaatgagcggaagactaagggccagcagagtcgccctaagccttatagtgcccctgctgataagggcaaacag 3289  T
Q  107 aggatggtcgaggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttg 206  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||| | |||||||||||| |||||||||||||| || | || ||||| ||    
T  3288 aggatggtcgaggagagacggcctaagaaaaaggatgttcctgctgagattacttctttcaattgtggtgagaaaggccacaagagtactgcttgtcctg 3189  T
Q  207 aggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtca 306  Q
    |||| ||  |||| ||||||||||||||||||||||| |||| ||||||||||||||| |||| ||| || |||||||| ||||| || || ||||||||    
T  3188 aggaggtggagaagtgtttccggtgtggcaagaagggtcacacattagctgattgcaaacatgctgacatcgtgtgctttaattgcaaagaggagggtca 3089  T
Q  307 tattggttctcagtgcaagcagcctaagagggcgccgactac 348  Q
    ||||||||| || |||||||||||||| |||||||| |||||    
T  3088 tattggttcccaatgcaagcagcctaatagggcgcctactac 3047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 195; Significance: 1e-106; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 7 - 349
Target Start/End: Complemental strand, 23461398 - 23461056
Alignment:
Q  7 ggacatcaaagctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacag 106  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| | |||||||||||| ||| ||    
T  23461398 ggacaccaaagctcattacaaggttgtgaatgagcggaagactaagggccagcagagtcgccctaagccctatagtgcccctgctgataagggaaaatag 23461299  T
Q  107 aggatggtcgaggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttg 206  Q
    || |||||||| || || ||||||||||| ||||||| |||||| || |||  ||||||||||||||| |||||||||||||| |||||||||||||  |    
T  23461298 agaatggtcgatgataggcggcctaagaagaaggatgctcctgcggaaattgtctatttcaattgtggtgagaaaggccacaagagcaatgtttgtccag 23461199  T
Q  207 aggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtca 306  Q
    |||| || ||||||||||||||||||||||||||| | || |  |||||||| ||||||||||||||||||||||| ||| |||| |||||||||||| |    
T  23461198 aggaggtgaagaaatgtttccggtgtggcaagaagagtcatactttagctgaatgcaagcatggtgatattgtgtgtttcgattgcaaggaagagggtaa 23461099  T
Q  307 tattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||||||| |||||||| || ||||||| |||||||||||||    
T  23461098 tattggttcccagtgcaaacaacctaagaaggcgccgactact 23461056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 20804014 - 20803682
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||||||||| |||||| | |||||||||||||||| |||| |||||||||||||||||| | |||||||||||||||| |||| |||||||    
T  20804014 gctcattacaaggttgtggatgagcagaagactaagggccaacaaagtctccctaagccctatagtgcccctgctgataagggcaaatagagaatggtcg 20803915  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || ||||||||||| ||||||| |||||| ||||||  || |||||||| ||| |||||||||||||| || |||||||| | |||||| || ||    
T  20803914 atgataggcggcctaagaagaaggatgctcctgcggagattgtctgtttcaattatggtgagaaaggccacaagagaaatgtttgccctgaggaggtgaa 20803815  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    |||||||||| |||||||||||||||| || |  |||||||| ||||||||| |||||||||||||||||||| | ||||||||| ||||||||||||||    
T  20803814 gaaatgtttctggtgtggcaagaagggtcatactttagctgactgcaagcatagtgatattgtgtgcttcaatggcaaggaagagagtcatattggttct 20803715  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    |||||||||||||||||||||| || |||||||    
T  20803714 cagtgcaagcagcctaagagggtgctgactact 20803682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 23526468 - 23526136
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||| ||||||||||| || ||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  23526468 gctcattacaagattgtgaatgagtggaagactaagggccagcagagtcgcactaagccctatagtgctcttgctgacaagggcaaatagaggatggtcg 23526369  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    |||| |||||||| | ||| ||||||| |||||||||||||  || ||| |||||||| |||||||||||||| ||||||| ||||| |   || |||||    
T  23526368 aggatagacggccaaggaagaaggatgctcctgctgagattgtctgttttaattgtggtgagaaaggccacaagagcaatgcttgtcctagagaggtaaa 23526269  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
     | ||||||| | ||||| |||||||| ||   ||||||  ||||||| | |  ||||||||||||||||||||| || |||||||||||||||||||||    
T  23526268 aagatgtttcagatgtggtaagaagggtcatgcattagccaattgcaaccgtaatgatattgtgtgcttcaattgcaatgaagagggtcatattggttct 23526169  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||||||||||||||||| |||||||||||||    
T  23526168 cagtgcaagcagcctaagaaggcgccgactact 23526136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 21 - 348
Target Start/End: Complemental strand, 18782527 - 18782200
Alignment:
Q  21 attacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcgagga 120  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||| |||||||| ||    
T  18782527 attacaaggttgtgaatgagcggaagaccaagggccaacagagtcgccctaagccttatagtgcccctgctgataagggcaaacagagaatggtcgatga 18782428  T
Q  121 aagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaa 220  Q
     ||  || ||||||| ||||||| |||||| ||||||   | |||||| |||||||||||||||||||| || |||||||||| ||| ||  | || |||    
T  18782427 taggtggtctaagaagaaggatgctcctgcggagattgtttgtttcaactgtggcgagaaaggccacaagagtaatgtttgtcctgaagagatcaaaaaa 18782328  T
Q  221 tgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagt 320  Q
    ||| ||||||||||||||||||| || ||  ||||||||||||||| |  |||||| || |||||||||||||| ||||||| |||||||||||| || |    
T  18782327 tgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaatgatatcgtatgcttcaattgtaatgaagaggttcatattggttcccaat 18782228  T
Q  321 gcaagcagcctaagagggcgccgactac 348  Q
    |||||||||| ||||||||||| |||||    
T  18782227 gcaagcagccgaagagggcgcctactac 18782200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 21883192 - 21882859
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||    
T  21883192 gctcattacaaggttgtgaatgagcggaagactaagggccagcagagtcgccctaagccctatagtgcccctgctgataagggcaaacagagaatggtcg 21883093  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    |||| |||||||| | ||| || |||||| |||||||||||  || ||| ||||||||||||||||||||||| ||||||| |||||  |  || |||||    
T  21883092 aggatagacggccgaggaagaaagatgtttctgctgagattgtctgttttaattgtggcgagaaaggccacaagagcaatgcttgtccgggagaggtaaa 21882993  T
Q  217 gaaatg-tttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttc 315  Q
    || ||| |||| | ||||| |||||||| ||   | ||||||| |  || |||  ||| |||||||||||||||||||| ||||| ||||| ||||||||    
T  21882992 gagatgttttcagatgtggtaagaagggtcatgcaatagctgagtagaaacataatgacattgtgtgcttcaattgtaatgaagaaggtcacattggttc 21882893  T
Q  316 tcagtgcaagcagcctaagagggcgccgactact 349  Q
    |||||| ||||||||||||| || ||||||||||    
T  21882892 tcagtgtaagcagcctaagaaggtgccgactact 21882859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 25429837 - 25429506
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||| |||||||||||||| |||||||||| || |||||||||| |||||| || ||||| | |||| ||||||||||| |||||||||| |    
T  25429837 gctcattacaagattgtgaatgagcggaagactaagggtcagcagagtcgccttaagccttacagtgcccctgctaataagggcaaatagaggatggttg 25429738  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || ||||||||||| ||||||  |||||| ||||||  || ||| | |||||| |||||||||||||| ||||||| ||||| || ||| |||||    
T  25429737 aagataggcggcctaagaagaaggatactcctgcagagattgtctgttttacttgtggtgagaaaggccacaagagcaatgcttgtcctg-ggatgtaaa 25429639  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
     | |||||| || ||||| |||||||| ||   | |||||||  |||| |||| |||||| || |||||||||||||| ||||||||||| ||||||||     
T  25429638 tagatgttttcgctgtggaaagaagggtcatgcactagctgagggcaaacatgatgatatagtatgcttcaattgtaatgaagagggtcacattggttca 25429539  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    || |||||| ||||||||| ||||||| |||||    
T  25429538 caatgcaagaagcctaagaaggcgccggctact 25429506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 17 - 143
Target Start/End: Original strand, 23537184 - 23537310
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||| | | ||||||||||||||||||| |||||||    
T  23537184 gctcattacaaggttgtgaatgagcggaagactaagggccagcagagtcgccctatgccctatagtgcccctcctgataagggcaaacagagaatggtcg 23537283  T
Q  117 aggaaagacggcctaagaataaggatg 143  Q
    | || || ||||||||||| |||||||    
T  23537284 atgataggcggcctaagaagaaggatg 23537310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 19773374 - 19773045
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||| || ||   ||||| || |||||||| |||||||| || ||||| |  |||||||| || ||||||| ||||||||    
T  19773374 gctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgataaagggaaacagaagatggtcg 19773275  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||||||   | |||||||||||| |||||||||||||| ||||| || || | ||||||| | ||    
T  19773274 atgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgagaaaggccacaaaagcaacgtctgccctgaggaaatcaa 19773178  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||||||||| || ||  |  ||||||||||||| | |   || ||||||||||| ||||| || | ||||||||| ||| ||||     
T  19773177 gaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtacggacattgtgtgctttaattgcaatggagagggtcacattagttca 19773078  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  19773077 cagtgtactcagcctaagagggcgccgactact 19773045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 37288468 - 37288797
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||| || ||   ||||| || |||||||| |||||||| || |||||||  |||||||| || ||||||||||||||||    
T  37288468 gctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgctcccgctgataaagggaaacagaggatggtcg 37288567  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || ||||||||||| |||||||   || | ||||||   | |||||||||||| | |||||||||||| ||||| || || | ||| ||| | ||    
T  37288568 atgataggcggcctaagaagaaggatg---ctacagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaacgtctgccctgaagaaatcaa 37288664  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||||||||| |  |||||  ||||||| ||||||| |   || |||||||| || || || || | ||||||||| ||| ||||     
T  37288665 gaagtgtgtccggtgtggcaagaaagttcacattgtagctgaatgcaagcgtacggacattgtgtgttttaactgcaatggagagggtcacattagttca 37288764  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  37288765 cagtgtactcagcctaagagggcgccgactact 37288797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 41774256 - 41773927
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||  || ||   ||||| || |||||||| |||||||| || ||||| |  |||||||| || ||||||| ||||||||    
T  41774256 gctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgataaagggaaacagaagatggtcg 41774157  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| ||| |||   |||||||||||   | |||||||||||| |||||||||||||| ||||| || || | ||||||| | ||    
T  41774156 atgttaggcggcctaagaagaagaatg---ctgctgagattgtgtgtttcaattgtggtgagaaaggccacaaaagcaacgtctgccctgaggaaatcaa 41774060  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||||||||| || ||  |  ||||||||||||| | |   || ||||||||||| ||||| || | ||||||||| ||| ||||     
T  41774059 gaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtacggacattgtgtgctttaattgcaacggagagggtcacattagttca 41773960  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  41773959 cagtgtactcagcctaagagggcgccgactact 41773927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 50 - 349
Target Start/End: Complemental strand, 22138049 - 22137753
Alignment:
Q  50 aagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcgaggaaagacggcctaagaataaggatgttcctg 149  Q
    ||||| || |||||||| |||||||| || ||||| | ||||||||| || |||||||| |||||||| || || ||||||||||| |||||||   ||     
T  22138049 aagggacagcagagtcgtcctaagccgtacagtgcccctgctgataaagggaaacagagaatggtcgatgataggcggcctaagaagaaggatg---cta 22137953  T
Q  150 ctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacat 249  Q
     |||||||   | |||||||||||| | |||||||||||| |||||||| || | ||||||| | ||||| ||| |||||||||||||||| || || ||    
T  22137952 ttgagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtctgccctgaggaaatcaagaagtgtgtccggtgtggcaagaaaggtcatat 22137853  T
Q  250 attagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
      ||||||| ||||||| |   || |||||||| || ||||| || | ||||||||| ||| |||| ||||| |  ||||||||||||||||||| ||||    
T  22137852 tgtagctgaatgcaagcgtacggacattgtgtgttttaattgcaatggagagggtcacattagttcacagtgtactcagcctaagagggcgccgaatact 22137753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 16359916 - 16359587
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||| || ||   ||||| || |||||||| |||||||| || ||||| |  ||||| || || ||||||| ||||||||    
T  16359916 gctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaagggaaacagaagatggtcg 16359817  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||||||   | |||||||||||| |||||||||||||| ||||| || || | ||||||| | ||    
T  16359816 atgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgagaaaggccacaagagcaacgtctgccctgaggaaatcaa 16359720  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||| |||||||| ||  |  ||||||||||||| | |   || ||||| ||||| ||||| || | ||||||||| ||| ||||     
T  16359719 gaagtgtgtccggtgtggtaagaagggtcatgttgtagctgattgcaaccgtacagacattgtttgctttaattgcaatggagagggtcacattagttca 16359620  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  16359619 cagtgtactcagcctaagagggcgccgactact 16359587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 22329859 - 22330188
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||| || ||   ||||| || |||||||| |||||||| || ||||| | ||||||||| || ||||||| ||||||||    
T  22329859 gctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccctgctgataaagggaaacagaagatggtcg 22329958  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||||||   | |||||||||||| |||||||||||||| ||||| || || | ||||||| | ||    
T  22329959 atgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgagaaaggccacaaaagcaacgtctgccctgaggaaatcaa 22330055  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||||||||| || ||  |  ||||||||||||| | |   || |||||||| || || || || | ||||||||  ||| ||||     
T  22330056 gaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtacggacattgtgtgttttaactgcaatggagagggtcgcattagttca 22330155  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  22330156 cagtgtactcagcctaagagggcgccgactact 22330188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 27521820 - 27521491
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||| || ||  |||||| || |||||||| |||||||| || ||||| | |||||| || || ||||||| ||||||||    
T  27521820 gctcactacaaggtagtgaatgagaggaagggtaagggacagcagagtcgtcctaagccgtacagtgcccctgctgacaaagggaaacagaagatggtcg 27521721  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||| ||||||| |||||||   |||| ||||||   | |||||||||||| |||||||||||||| ||||| || || | ||||||| | ||    
T  27521720 atgttaggcggtctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgagaaaggccacaaaagcaacgtctgccctgaggaaatcaa 27521624  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||||||||| |  ||  |  ||||||||||||| | |   || ||||| ||||| ||||| || | ||||||||| ||| ||||     
T  27521623 gaagtgtgtccggtgtggcaagaaagatcatgttgtagctgattgcaatcgtacagacattgtttgctttaattgcaacggagagggtcacattagttca 27521524  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  27521523 cagtgtactcagcctaagagggcgccgactact 27521491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 27613770 - 27613441
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||  || ||   ||||| ||||||||||| |||||||| || ||||| | ||||||||| || ||||||| | ||||||    
T  27613770 gctcactacaaggtagtgaatgaaaggaagggcaagggacaacagagtcgtcctaagccgtacagtgcccctgctgataaagggaaacagaaggtggtcg 27613671  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  |||||||||||||| | |||||   |||| ||||||   | |||||||||||| ||||| |||||||| |||||||| || | ||| ||| | ||    
T  27613670 atgtgagacggcctaagaagagggatg---ctgcagagattgtgtgtttcaattgtggtgagaagggccacaagagcaatgtctgccctgaagaaatcaa 27613574  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||||||||| || ||  |  ||||||||||||| | |   || ||||||||||| ||||| || | ||||| ||| ||| ||||     
T  27613573 gaagtgtgtccggtgtggcaagaaaggtcatgtggtagctgattgcaatcgtacggacattgtgtgctttaattgcaatggagaggctcacattagttca 27613474  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  27613473 cagtgtactcagcctaagagggcgccgactact 27613441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 34569908 - 34569579
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||| || ||   ||||| || |||||||| |||||||| || ||||| |  ||||| || || ||||||| ||||||||    
T  34569908 gctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaagggaaacagaagatggtcg 34569809  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||||||   | |||||||||||| |||||||||||||| ||||| || || | ||||||| | ||    
T  34569808 atgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgagaaaggccacaagagcaacgtctgccctgaggaaatcaa 34569712  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||| |||||||| ||  |  ||||||||||||| | |   || ||||| ||||| ||||| || | ||||||||| ||| ||||     
T  34569711 gaagtgtgtccggtgtggtaagaagggtcatgttgtagctgattgcaaccgtacagacattgtttgctttaattgcaatggagagggtcacattagttca 34569612  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  34569611 cagtgtactcagcctaagagggcgccgactact 34569579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 50 - 349
Target Start/End: Original strand, 14996744 - 14997040
Alignment:
Q  50 aagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcgaggaaagacggcctaagaataaggatgttcctg 149  Q
    ||||| || |||||||| |||||||| || ||||| | ||||||||| || ||||||| |||||| || |  || || |||||||| |||||||   |||    
T  14996744 aagggacagcagagtcgtcctaagccgtacagtgcccctgctgataaagggaaacagaagatggttgatgttaggcgacctaagaagaaggatg---ctg 14996840  T
Q  150 ctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacat 249  Q
    | ||||||   | |||||||||||| |||||||||||||| ||||| || || | ||||||| | ||||| ||| |||||||||||||||| || ||  |    
T  14996841 cagagattgtgtgtttcaattgtggtgagaaaggccacaaaagcaacgtctgccctgaggaaatcaagaagtgtgtccggtgtggcaagaaaggtcatgt 14996940  T
Q  250 attagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
      ||||||||||||| | |   || ||||||||||| ||||| || | ||||||||| ||| |||| ||||| |  ||||||||||||||||||||||||    
T  14996941 tgtagctgattgcaatcgtacggacattgtgtgctttaattgcaacggagagggtcacattagttcacagtgtactcagcctaagagggcgccgactact 14997040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 27682372 - 27682701
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||| |  ||   ||||| || |||||||| |||||||| || ||||| | ||||||||| || ||||||| ||||||||    
T  27682372 gctcactacaaggtagtgaatgagagaaagggcaagggacagcagagtcgtcctaagccgtacagtgcccctgctgataaagggaaacagaagatggtcg 27682471  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || || |||||||| |||||||   |||| ||||||   | |||||||||||| |||||||||||||| ||||| || || | ||||||| | ||    
T  27682472 atgttaggcgtcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgagaaaggccacaaaagcaacgtctgccctgaggaaatcaa 27682568  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||||||||| || ||     ||||||||||||| | |   ||  |||||||||| ||||| || | ||||||||| ||| ||||     
T  27682569 gaagtgtgtccggtgtggcaagaaaggtcatgctgtagctgattgcaatcgtacggacgttgtgtgctttaattgcaacggagagggtcacattagttca 27682668  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  || |||||||||||||||||||||    
T  27682669 cagtgtactcatcctaagagggcgccgactact 27682701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 29473045 - 29473374
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||| || ||   ||||| || |||||||| |||||||| || ||||  |  |||||||| || ||||||||||||||||    
T  29473045 gctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgtccccgctgataaagggaaacagaggatggtcg 29473144  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || ||||||||||| |||||||   || | ||||||   | |||||||||||| | |||||||||||| |||||||| || | ||| ||| | ||    
T  29473145 atgataggcggcctaagaagaaggatg---ctacagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtctgccctgaagaaatcaa 29473241  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| | || ||||||||||| || || ||  ||||||| ||||||| |   || |||||||| || || || || | ||||||||| ||| ||||     
T  29473242 gaagtgtgttcgatgtggcaagaaaggtcatattgtagctgaatgcaagcgtacggacattgtgtgttttaactgcaatggagagggtcacattagttca 29473341  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  29473342 cagtgtactcagcctaagagggcgccgactact 29473374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 40712194 - 40711865
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||  || ||   ||||| || |||||||| |||||||| || ||||| |  ||||| || || ||||||| ||||||||    
T  40712194 gctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaaggtaaacagaagatggtcg 40712095  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||||||   |  ||||||||||| |||||||||||||| ||||| |  |||| ||||||| | ||    
T  40712094 atgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgcttcaattgtggtgagaaaggccacaagagcaacgcctgtcctgaggaaatcaa 40711998  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||  |||||||||| |||||||| |   |  | ||||||||||| | |   || ||||||||||| ||||| || | ||||||||| ||| ||||     
T  40711997 gaagtgcgtccggtgtggtaagaagggtcgtgtggtggctgattgcaatcgtacagacattgtgtgctttaattgcaatggagagggtcacattagttca 40711898  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  40711897 cagtgtactcagcctaagagggcgccgactact 40711865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 50 - 349
Target Start/End: Complemental strand, 22351300 - 22351004
Alignment:
Q  50 aagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcgaggaaagacggcctaagaataaggatgttcctg 149  Q
    ||||| || |||||||| | |||||| || ||||| | ||||||||| || ||||||| ||||||||| || || ||||||||||| |||||||   ||     
T  22351300 aaggggcagcagagtcgtcataagccgtacagtgcccctgctgataaagggaaacagaagatggtcgatgataggcggcctaagaagaaggatg---cta 22351204  T
Q  150 ctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacat 249  Q
    ||||||||   | |||||| ||||| | |||||||||||| |||||||| || |  || ||| | ||||| ||| |||||||||||||||| || || ||    
T  22351203 ctgagattgtgtgtttcaactgtggtgggaaaggccacaaaagcaatgtctgccccgaagaaatgaagaagtgtgtccggtgtggcaagaaaggtcatat 22351104  T
Q  250 attagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
      ||||| | ||||||| |    | |||||||| || || || || | ||||||||| ||| |||| ||||| |  || |||||||||||||||||||||    
T  22351103 tgtagcttaatgcaagcgtacgaacattgtgtgttttaactgcaatggagagggtcacattagttcacagtgtactcatcctaagagggcgccgactact 22351004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 349
Target Start/End: Original strand, 27665610 - 27665791
Alignment:
Q  168 attgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagca 267  Q
    ||||||| |||||||||||||| ||||| |  || | ||||||| | ||||| ||| |||||||||| ||||| || ||  |  ||||||||||||| ||    
T  27665610 attgtggtgagaaaggccacaagagcaacgcctgccctgaggaaatcaagaagtgtgtccggtgtggtaagaaaggtcatgttgtagctgattgcaatca 27665709  T
Q  268 tggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
    |   || ||||||||||| ||||| || | ||||||||| ||| |||| ||||| |  ||||||||||||||||||||||||    
T  27665710 tacagacattgtgtgctttaattgcaatggagagggtcacattagttcacagtgtactcagcctaagagggcgccgactact 27665791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 215 - 335
Target Start/End: Original strand, 16258203 - 16258323
Alignment:
Q  215 aagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggtt 314  Q
    ||||| || ||||| ||||| ||||| || || | | ||||||| ||||||| |||||||||||| || ||||||||| | || || |||||| || |||    
T  16258203 aagaagtgcttccgatgtgggaagaaagggcatacaatagctgaatgcaagcgtggtgatattgtttgtttcaattgtgatgaggaaggtcatcttagtt 16258302  T
Q  315 ctcagtgcaagcagcctaaga 335  Q
    | ||||||||| |||||||||    
T  16258303 cgcagtgcaagaagcctaaga 16258323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 335
Target Start/End: Original strand, 21983389 - 21983464
Alignment:
Q  260 tgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaaga 335  Q
    ||||||| |||||||||||| |||||||||||| | ||||| |||||| || |||| ||||||| | |||||||||    
T  21983389 tgcaagcgtggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaagcctaaga 21983464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 335
Target Start/End: Original strand, 22591959 - 22592042
Alignment:
Q  252 tagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaaga 335  Q
    ||||||| ||||||| |||||||||||| || ||||||||| | || || |||||| || |||| ||||||||| |||||||||    
T  22591959 tagctgaatgcaagcgtggtgatattgtttgtttcaattgtgatgaggaaggtcatcttagttcgcagtgcaagaagcctaaga 22592042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 335
Target Start/End: Original strand, 22595514 - 22595597
Alignment:
Q  252 tagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaaga 335  Q
    ||||||| ||||||| |||||||||||| || ||||||||| | || || |||||| || |||| ||||||||| |||||||||    
T  22595514 tagctgaatgcaagcgtggtgatattgtttgtttcaattgtgatgaggaaggtcatcttagttcgcagtgcaagaagcctaaga 22595597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 170 - 323
Target Start/End: Original strand, 17266456 - 17266609
Alignment:
Q  170 tgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatg 269  Q
    |||||||||||||| ||||| || || ||||||   ||||| |  ||||| || ||| |||||||  ||||||| |||||  |||| ||||||||||  |    
T  17266456 tgtggcgagaaaggtcacaagagtaacgtttgtaccgaggatgagaagaagtgcttcaggtgtggacagaagggtcacatgctagccgattgcaagcgcg 17266555  T
Q  270 gtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgca 323  Q
    ||||| |||| ||||  |||||||| ||||||||||| ||  || |||||||||    
T  17266556 gtgatgttgtatgctataattgtaatgaagagggtcacatcagtactcagtgca 17266609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 335
Target Start/End: Original strand, 21631614 - 21631686
Alignment:
Q  263 aagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaaga 335  Q
    ||||||| |||| | ||||| ||||| || || ||||| |||||||||||||| ||||||||| |||||||||    
T  21631614 aagcatgatgatgtggtgtgtttcaactgcaatgaagaaggtcatattggttcgcagtgcaagaagcctaaga 21631686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 105
Target Start/End: Original strand, 21631365 - 21631456
Alignment:
Q  14 aaagctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaaca 105  Q
    ||||||||||||||||||||||||||| || ||  || | | || || ||||| || ||||| || ||||||| |||||||||||| |||||    
T  21631365 aaagctcattacaaggttgtgaatgagaggaagggtaggagtcagcaaagtcgtccaaagccttacagtgctcctgctgataagggtaaaca 21631456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 335
Target Start/End: Complemental strand, 23669878 - 23669713
Alignment:
Q  170 tgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatg 269  Q
    ||||| |||||||||||||| || ||||||||   ||  || |  ||||| || ||||| ||||| |||||||| || |   ||||||| ||||||| ||    
T  23669878 tgtggtgagaaaggccacaagagtaatgtttgcaatggtgaggagaagaagtgcttccgatgtggaaagaaggggcatacgatagctgaatgcaagcgtg 23669779  T
Q  270 gtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaaga 335  Q
    |||||||||| |||||||| ||| | ||||| |||||  || | || ||||||||| | |||||||    
T  23669778 gtgatattgtttgcttcaaatgtgacgaagaaggtcaccttagctcgcagtgcaagaatcctaaga 23669713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 43122631 - 43122591
Alignment:
Q  252 tagctgattgcaagcatggtgatattgtgtgcttcaattgt 292  Q
    ||||||| ||||||| |||||||||||| ||||||||||||    
T  43122631 tagctgaatgcaagcgtggtgatattgtttgcttcaattgt 43122591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 192; Significance: 1e-104; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 17 - 348
Target Start/End: Complemental strand, 11984466 - 11984135
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||    
T  11984466 gctcattacaaggttgtgaatgagcggaagaccaagggccagcagagtcgccctaagccctatagtgcccctgctgataagggcaaacagagaatggtcg 11984367  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || |||||||||||||| ||||||| ||| ||||||||||| | |||||||||||| |||||||||||||| ||||||||||||  ||| ||  | ||    
T  11984366 atgatagacggcctaagaagaaggatgctccagctgagattacttgtttcaattgtggtgagaaaggccacaagagcaatgtttgtactgaagagatcaa 11984267  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||||||| ||||||||||||||||||| || ||  ||||||||||||||| |  ||||||||||||||||||||  || ||||||||||||||||||||     
T  11984266 gaaatgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaatgatattgtgtgcttcaatttcaatgaagagggtcatattggttcc 11984167  T
Q  317 cagtgcaagcagcctaagagggcgccgactac 348  Q
    || ||||||||||||||||||||||| |||||    
T  11984166 caatgcaagcagcctaagagggcgcctactac 11984135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 16 - 348
Target Start/End: Complemental strand, 9591839 - 9591507
Alignment:
Q  16 agctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtc 115  Q
    |||||||||||||||||| |||||| || |||| |||||||| ||||||||||||||||| |||||||| | || |||||||||||| ||||| |||||     
T  9591839 agctcattacaaggttgttaatgagaggaagaccaagggccagcagagtcgccctaagccttatagtgcccctgttgataagggcaagcagagaatggtt 9591740  T
Q  116 gaggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaa 215  Q
    || || || ||||||||||| ||||||| |||||| ||||||  || |||||| |||||||||||||||||||| ||||||||||||| ||| ||  | |    
T  9591739 gatgataggcggcctaagaagaaggatgctcctgcagagattgtctgtttcaactgtggcgagaaaggccacaagagcaatgtttgtcctgaagagatca 9591640  T
Q  216 agaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttc 315  Q
    |||||||| ||||||||||||||||||| || ||  |||||||||||||||    |||||||||||||||||||||||| ||||||||||||||||||||    
T  9591639 agaaatgtgtccggtgtggcaagaagggtcatattatagctgattgcaagcgaaatgatattgtgtgcttcaattgtaatgaagagggtcatattggttc 9591540  T
Q  316 tcagtgcaagcagcctaagagggcgccgactac 348  Q
     || ||||||||||| ||||||| ||| |||||    
T  9591539 ccaatgcaagcagccgaagagggagcctactac 9591507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 16 - 347
Target Start/End: Original strand, 17703250 - 17703581
Alignment:
Q  16 agctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtc 115  Q
    |||||||||||||||||||||||||||| |||| |||||||| |||||||||||||| || |||||||| | | ||||||||||||||||||| ||||||    
T  17703250 agctcattacaaggttgtgaatgagcggaagaccaagggccagcagagtcgccctaaaccttatagtgcccctactgataagggcaaacagagaatggtc 17703349  T
Q  116 gaggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaa 215  Q
    || || || ||||| ||||| ||||||| |||||| || |||   | |||||| ||||||| |||||||||||| || |||||||||| ||| ||  | |    
T  17703350 gatgataggcggccaaagaagaaggatgctcctgcggatattgtttgtttcaactgtggcgggaaaggccacaagagtaatgtttgtcctgaagagatca 17703449  T
Q  216 agaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttc 315  Q
    |||||||| |||| |||||||| ||||| || ||  ||||||||||||||| |  |||||||||||||||||| ||||| ||||||||||| ||||||||    
T  17703450 agaaatgtgtccgatgtggcaaaaagggtcatattgtagctgattgcaagcgtaatgatattgtgtgcttcaactgtaatgaagagggtcacattggttc 17703549  T
Q  316 tcagtgcaagcagcctaagagggcgccgacta 347  Q
     || ||||||||||| |||||| |||| ||||    
T  17703550 ccaatgcaagcagccgaagaggtcgcctacta 17703581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 16 - 347
Target Start/End: Original strand, 16726236 - 16726567
Alignment:
Q  16 agctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtc 115  Q
    |||||||||||||||||||||||||||  |||| |||||||| |||||||||||||| || || ||||| | | ||||||||||||||||||| ||||||    
T  16726236 agctcattacaaggttgtgaatgagcgaaagaccaagggccagcagagtcgccctaaaccttaaagtgcccctactgataagggcaaacagagaatggtc 16726335  T
Q  116 gaggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaa 215  Q
    || || || ||||| ||||| ||||||| |||||| || |||   | |||||| ||||||| |||||||||||| || |||||||||| ||| ||  | |    
T  16726336 gatgataggcggccaaagaagaaggatgctcctgcggatattgtttgtttcaactgtggcgggaaaggccacaagagtaatgtttgtcctgaagagatca 16726435  T
Q  216 agaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttc 315  Q
    |||||||| |||| |||||||| ||||| || ||  ||||||||||||||| |  |||||||||||||||||| ||||| ||||||||||| ||||||||    
T  16726436 agaaatgtgtccgatgtggcaaaaagggtcatattgtagctgattgcaagcgtaatgatattgtgtgcttcaactgtaatgaagagggtcacattggttc 16726535  T
Q  316 tcagtgcaagcagcctaagagggcgccgacta 347  Q
     || ||||||||||| |||||| |||| ||||    
T  16726536 ccaatgcaagcagccgaagaggtcgcctacta 16726567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 18181214 - 18180885
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||| || ||  |||||| ||||||||||  |||||||| || ||||| |  |||||||| || ||||||| ||||||||    
T  18181214 gctcactacaaggtagtgaatgagaggaagggtaagggacaacagagtcttcctaagccgtacagtgcccccgctgataaagggaaacagaagatggtcg 18181115  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    |||  || ||||||||||| |||||||   |||| ||||||   | ||||||||||||||||||||||||| | |||||||| || | ||||||| | ||    
T  18181114 aggttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggcgagaaaggccacgaaagcaatgtctgccctgaggaaatcaa 18181018  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||||||||| || ||  |  ||||||||||||| | |   || ||||||||||| ||||| || | ||||||||| ||| ||||     
T  18181017 gaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtacggacattgtgtgctttaattgcaatggagagggtcacattagttca 18180918  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  18180917 cagtgtactcagcctaagagggcgccgactact 18180885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 15157856 - 15158185
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||| |  ||   ||||| || |||||||| |||||||| || ||||| | ||||||||| || ||||||| ||||||||    
T  15157856 gctcactacaaggtagtgaatgagagaaagggcaagggacagcagagtcgtcctaagccgtacagtgcccctgctgataaagggaaacagaagatggtcg 15157955  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||||||   | |||||||||||| |||||||||||||| ||||| || || | ||||||| | ||    
T  15157956 atgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgagaaaggccacaaaagcaacgtctgccctgaggaaatcaa 15158052  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||||||||| || ||  |  ||||||||||||| | |   || ||||||||||| ||||| || | ||||||||| ||| ||||     
T  15158053 gaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtacggacattgtgtgctttaattgcaacggagagggtcacattagttca 15158152  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  15158153 cagtgtactcagcctaagagggcgccgactact 15158185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 50 - 349
Target Start/End: Complemental strand, 12690939 - 12690643
Alignment:
Q  50 aagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcgaggaaagacggcctaagaataaggatgttcctg 149  Q
    ||||| || |||||||| |||||||| || ||||| | ||||||||| || ||||||||||||||||| || || ||||||||||| |||||||   ||     
T  12690939 aagggacagcagagtcgtcctaagccgtacagtgcccctgctgataaagggaaacagaggatggtcgatgataggcggcctaagaagaaggatg---cta 12690843  T
Q  150 ctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacat 249  Q
    | ||||||   | |||||||||||| | ||||| |||||| |||||||| |||| ||| ||  | ||||| ||| ||||||||||||||||||| || ||    
T  12690842 ccgagattgtgtgtttcaattgtggtgtgaaagtccacaaaagcaatgtctgtcctgaagagatcaagaagtgtgtccggtgtggcaagaagggtcatat 12690743  T
Q  250 attagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
      ||||||||||||||| |   || |||||||  || || || || |||||||| |||||| |||| ||||| |  ||||||||||||||||||||||||    
T  12690742 tgtagctgattgcaagcgtaaggacattgtgtattttaactgcaatgaagagggacatattagttcacagtgtactcagcctaagagggcgccgactact 12690643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 63 - 347
Target Start/End: Complemental strand, 14957933 - 14957652
Alignment:
Q  63 gtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcgaggaaagacggcctaagaataaggatgttcctgctgagattaccta 162  Q
    |||| |||||||| || ||||| | ||||||||| || ||||||||||||||||| || || ||||||||||| ||||||    || | ||||||   |     
T  14957933 gtcgtcctaagccgtacagtgcccctgctgataaagggaaacagaggatggtcgatgataggcggcctaagaagaaggata---ctaccgagattgtgtg 14957837  T
Q  163 tttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgc 262  Q
    |||||||||||| | |||||||||||| |||||||| |||| ||| ||  | ||||| ||| ||||||||||||||||||| || ||  |||||||||||    
T  14957836 tttcaattgtggtgtgaaaggccacaaaagcaatgtctgtcctgaagagatcaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgc 14957737  T
Q  263 aagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgacta 347  Q
    |||| |   || |||||||| || || || || |||||||| |||||| |||| ||||| |  ||||||||||||||||||||||    
T  14957736 aagcgtaaggacattgtgtgttttaactgcaatgaagagggacatattagttcacagtgtactcagcctaagagggcgccgacta 14957652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 50 - 349
Target Start/End: Original strand, 11549934 - 11550230
Alignment:
Q  50 aagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcgaggaaagacggcctaagaataaggatgttcctg 149  Q
    ||||| ||||||||||| |||||||| || ||||| | ||||||||| || ||||||||||||||||| || || ||||||||||| |||||||   ||     
T  11549934 aagggacaacagagtcgtcctaagccgtacagtgcccctgctgataaagggaaacagaggatggtcgatgataggcggcctaagaagaaggatg---cta 11550030  T
Q  150 ctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacat 249  Q
    | ||||||   | |||||||||||| | |||||||||||| |||||||| |||| ||| ||  | ||||| ||| || |||||||||||||||| || ||    
T  11550031 ccgagattgtgtgtttcaattgtggtgtgaaaggccacaaaagcaatgtctgtcctgaagagatcaagaagtgtgtctggtgtggcaagaagggtcatat 11550130  T
Q  250 attagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
      ||| ||||||||||| |   || |||||||| || || || || | |||||| |||||| ||||  |||| |  ||||||||||||||||||||||||    
T  11550131 tgtagttgattgcaagcgtaaggacattgtgtgttttaactgcaatggagagggacatattagttcatagtgtactcagcctaagagggcgccgactact 11550230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 13689512 - 13689183
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||| |  ||   ||||| || |||||||| |||||||| || ||||| | | ||||||| || ||||||| ||||||||    
T  13689512 gctcactacaaggtagtgaatgagagaaagggcaagggacaccagagtcgtcctaagccgtacagtgcccctactgataaagggaaacagaagatggtcg 13689413  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||||||   | |||||||||||| |||||||||||||| ||||| || || | ||||||| | ||    
T  13689412 atgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgagaaaggccacaaaagcaacgtctgccctgaggaaatcaa 13689316  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||||||||| || ||  |  ||||||||||||| | |   || ||||||||||| ||||| || | | ||||||| ||| ||||     
T  13689315 gaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtacggacattgtgtgctttaattgcaacggatagggtcacattagttca 13689216  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  13689215 cagtgtactcagcctaagagggcgccgactact 13689183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 11234012 - 11234341
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||| || ||   ||||| || |||||||| |||||||| || ||||| |  |||||||| || ||||||||||||||||    
T  11234012 gctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgataaagggaaacagaggatggtcg 11234111  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || ||||||||||| |||||||   || | ||||||   | |||||||||||| | |||||||||||| ||||| || || | ||| ||| | ||    
T  11234112 atgataggcggcctaagaagaaggatg---ctacagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaacgtctgccctgaagaaatcaa 11234208  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| | |||||||||||||| || || ||  ||||||| ||||||| |   || |||||||| || || || || | ||||||||| ||| ||||     
T  11234209 gaagtgtgttcggtgtggcaagaaaggtcatattgtagctgaatgcaagcgtacggacattgtgtgttttaactgcaatggagagggtcacattagttca 11234308  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  11234309 cagtgtactcagcctaagagggcgccgactact 11234341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 44788150 - 44788479
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||  || ||   ||||| || |||||||| |||||||| || ||||| | | ||||||| || ||||||| ||||||||    
T  44788150 gctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccctactgataaaggaaaacagaagatggtcg 44788249  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||||||   |  |||||||||||||||||||||||||| ||||| |  |||| ||||||| | ||    
T  44788250 atgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgcttcaattgtggcgagaaaggccacaagagcaacgcctgtcctgaggaaatcaa 44788346  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||| |||||||| ||  |  | ||||||||||| | |   || ||||| ||||| ||||| || | ||||||||| ||| ||||     
T  44788347 gaagtgtgtccggtgtggtaagaagggtcatgtggtggctgattgcaaccgtacagacattgtttgctttaattgcaacggagagggtcacattagttca 44788446  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |   |||||||||||||||||||||||    
T  44788447 cagtgtacttagcctaagagggcgccgactact 44788479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 8711076 - 8710747
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||  || ||   ||||| || |||||||| |||||||| || ||||| |  ||||| || || ||||||| ||||||||    
T  8711076 gctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaagggaaacagaagatggtcg 8710977  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||||||   | |||||||||||| |||||||||||||| ||||| |  |||| ||||||| | ||    
T  8710976 atgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgagaaaggccacaaaagcaacgcctgtcctgaggaaatcaa 8710880  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||| ||||| || ||  |  ||||||||||||| | |   || ||||| ||||| ||||| || | | ||||||| ||| ||||     
T  8710879 gaagtgtgtccggtgtggtaagaaaggtcatgttgtagctgattgcaatcgtacagacattgtttgctttaattgcaacggaaagggtcacattagttca 8710780  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  8710779 cagtgtactcagcctaagagggcgccgactact 8710747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 18 - 188
Target Start/End: Original strand, 15145720 - 15145890
Alignment:
Q  18 ctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcga 117  Q
    ||||||||||| |||||||||||||  || | ||||| ||||||||||| |||||||| |||||| | | |||||||||||||||||||||  | || ||    
T  15145720 ctcattacaagattgtgaatgagcgaaaggccaagggtcaacagagtcgtcctaagccttatagtccccctgctgataagggcaaacagagagtagttga 15145819  T
Q  118 ggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccaca 188  Q
     || || || |||||||| ||||||| |||||||||||||  ||  || | |||||| |||||||||||||    
T  15145820 tgataggcgccctaagaagaaggatgctcctgctgagattgtcttctttacttgtggtgagaaaggccaca 15145890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 14335867 - 14335538
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||  || ||   ||||| || |||||||| |||||||| || | ||| |  ||||| || || ||||||| ||||||||    
T  14335867 gctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacaatgcccccgctgacaaagggaaacagaagatggtcg 14335768  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||||||   |  ||||||||||| |||||||||||||| ||||| |  |||| ||||||| | ||    
T  14335767 atgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgcttcaattgtggtgagaaaggccacaagagcaacgcctgtcctgaggaaatcaa 14335671  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||| |||||||| ||  |  | ||||||||||| | |   || ||||| ||||| ||||| || | ||||||||| ||| ||||     
T  14335670 gaagtgtgtccggtgtggtaagaagggtcatgtggtggctgattgcaatcgtacagacattgtttgctttaattgcaacggagagggtcacattagttca 14335571  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  14335570 cagtgtactcagcctaagagggcgccgactact 14335538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 18586970 - 18587299
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||  || ||   ||||| || |||||||| |||||||| || | ||| |  ||||| || || ||||||| ||||||||    
T  18586970 gctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacaatgcccccgctgacaaagggaaacagaagatggtcg 18587069  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   || | ||||||   |  ||||||||||| |||||||||||||| ||||| |  |||| ||||||| | ||    
T  18587070 atgttaggcggcctaagaagaaggatg---ctacagagattgtgtgcttcaattgtggtgagaaaggccacaagagcaacgcctgtcctgaggaaatcaa 18587166  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||| |||||||| ||  |  | ||||||||||| | |   || ||||| ||||| ||||| || | ||||||||| ||| ||||     
T  18587167 gaagtgtgtccggtgtggtaagaagggtcatgtggtggctgattgcaatcgtacggacattgtttgctttaattgcaacggagagggtcacattagttca 18587266  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  18587267 cagtgtactcagcctaagagggcgccgactact 18587299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 243
Target Start/End: Complemental strand, 10873932 - 10873709
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||| || ||   | ||| || |||||||| |||||||| || ||||| |  ||||| || || ||||||| ||||||||    
T  10873932 gctcactacaaggtagtgaatgagaggaagggcaggggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaagggaaacagaagatggtcg 10873833  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||||||   |  ||||||||||| ||||||| |||||| ||||| |  |||| ||||||| | ||    
T  10873832 atgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgcttcaattgtggtgagaaagaccacaagagcaacgcctgtcctgaggaaatcaa 10873736  T
Q  217 gaaatgtttccggtgtggcaagaaggg 243  Q
    ||| ||| |||||||||| ||||||||    
T  10873735 gaagtgtgtccggtgtggtaagaaggg 10873709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 309
Target Start/End: Original strand, 14283301 - 14283440
Alignment:
Q  170 tgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatg 269  Q
    |||||||||||||||||||| || |||||||||    |||| |  ||||| || ||| |||||||  ||||||| |||| ||||||||||||||||| ||    
T  14283301 tgtggcgagaaaggccacaagagtaatgtttgtaccaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacacattagctgattgcaagcgtg 14283400  T
Q  270 gtgatattgtgtgcttcaattgtaaggaagagggtcatat 309  Q
    ||||| |||| || |  || || || ||||||||||||||    
T  14283401 gtgatgttgtatgttataactgcaacgaagagggtcatat 14283440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 14043169 - 14043072
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggt 114  Q
    |||||||||||| |||||||||||||| |    || || ||||||||| | || ||||| |||||||||| |||||||||||| |||||||| |||||    
T  14043169 gctcattacaagattgtgaatgagcggaaagtcaaaggtcaacagagttgtccaaagccttatagtgctcctgctgataagggtaaacagagaatggt 14043072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 14353199 - 14353102
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggt 114  Q
    |||||||||||| |||||||||||||| |    || || ||||||||| | || ||||| |||||||||| |||||||||||| |||||||| |||||    
T  14353199 gctcattacaagattgtgaatgagcggaaagtcaaaggtcaacagagttgtccaaagccttatagtgctcctgctgataagggtaaacagagaatggt 14353102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 335
Target Start/End: Complemental strand, 15627755 - 15627680
Alignment:
Q  260 tgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaaga 335  Q
    |||||||||| |||| | ||||| ||||| || || |||||||||||||||||||| ||||| ||| |||||||||    
T  15627755 tgcaagcatgatgatgtggtgtgtttcaactgcaatgaagagggtcatattggttcgcagtgaaagtagcctaaga 15627680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 105
Target Start/End: Complemental strand, 15628001 - 15627910
Alignment:
Q  14 aaagctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaaca 105  Q
    |||||||||||||||||| |||||||| || | | |||| | ||||| ||||| || ||||| || ||||||| |||||||||||| |||||    
T  15628001 aaagctcattacaaggttatgaatgagaggaaaagtaagagtcaacaaagtcgtccaaagccttacagtgctcctgctgataagggtaaaca 15627910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 228 - 335
Target Start/End: Complemental strand, 19150275 - 19150168
Alignment:
Q  228 ggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagca 327  Q
    |||||||  |||| || |||| ||| ||||||||||||| ||| |||||||| |||| ||| ||||| ||||| || |||||| |||| ||||| | |||    
T  19150275 ggtgtggtcagaaaggacacacattggctgattgcaagcgtggagatattgtttgctacaactgtaatgaagaaggacatattagttcgcagtgtacgca 19150176  T
Q  328 gcctaaga 335  Q
     |||||||    
T  19150175 acctaaga 19150168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 228 - 335
Target Start/End: Complemental strand, 20749674 - 20749567
Alignment:
Q  228 ggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagca 327  Q
    |||||||  |||| || |||| ||| ||||||||||||| ||| |||||||| |||| ||| ||||| ||||| || |||||| |||| ||||| | |||    
T  20749674 ggtgtggtcagaaaggacacacattggctgattgcaagcgtggagatattgtttgctacaactgtaatgaagaaggacatattagttcgcagtgtacgca 20749575  T
Q  328 gcctaaga 335  Q
     |||||||    
T  20749574 acctaaga 20749567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 108
Target Start/End: Original strand, 14283145 - 14283239
Alignment:
Q  14 aaagctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagag 108  Q
    |||||||||||||||||  ||| |||| |   || |||||| || ||||||||||| ||||| |||||||| | |||||||||||| || |||||    
T  14283145 aaagctcattacaaggtgatgagtgagagaaggaataagggacagcagagtcgcccgaagccgtatagtgcccctgctgataagggtaagcagag 14283239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 335
Target Start/End: Complemental strand, 15114436 - 15114358
Alignment:
Q  257 gattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaaga 335  Q
    |||||||| |||  |||||| || ||||  || ||||||||||| ||||||||| |||| ||||||||| |||||||||    
T  15114436 gattgcaatcataatgatatggtttgctataactgtaaggaagaaggtcatattagttcgcagtgcaagaagcctaaga 15114358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451 (Bit Score: 186; Significance: 1e-100; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 7 - 348
Target Start/End: Original strand, 13812 - 14153
Alignment:
Q  7 ggacatcaaagctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacag 106  Q
    ||||| || |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||    
T  13812 ggacaccagagctcattacaaggttgttaatgagcggaagactaagggccaacagagtcgccctaagccctatagtgcccctgatgataagggcaaacag 13911  T
Q  107 aggatggtcgaggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttg 206  Q
    || |||||||| || || ||||||||||| ||||||| |||||| ||||||  || ||| |||||||| |||||||||||||| |||||||||||||  |    
T  13912 agaatggtcgatgataggcggcctaagaagaaggatgctcctgcggagattgtctgttttaattgtggtgagaaaggccacaagagcaatgtttgtccag 14011  T
Q  207 aggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtca 306  Q
    | ||  ||||||||||| || |||||||||||||||| |  ||| ||||||||||||||| |  ||||||||||||||||||||| || |||||||||||    
T  14012 aagagataaagaaatgtgtcaggtgtggcaagaagggtcgtatagtagctgattgcaagcgtaatgatattgtgtgcttcaattgcaatgaagagggtca 14111  T
Q  307 tattggttctcagtgcaagcagcctaagagggcgccgactac 348  Q
    ||||||||| || ||||||||||||||||||||||| |||||    
T  14112 tattggttcccaatgcaagcagcctaagagggcgcctactac 14153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 181; Significance: 9e-98; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 24784716 - 24785048
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||   ||||||||||||||||||||| |||||||    
T  24784716 gctcattacaaggttgtgaatgagcggaagactaagggccaacagagtctccctaagccctatagtgcctctgctgataagggcaaacagagaatggtcg 24784815  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || ||||||||||| ||||||| |||||| ||||||  || |||||||| ||| |||||||||||||| |||||||||||||  |||||  ||||    
T  24784816 atgataggcggcctaagaagaaggatgctcctgcggagattgtctgtttcaattatggtgagaaaggccacaagagcaatgtttgtccagaggagataaa 24784915  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    |||||||  |||||||||||||||||| || |   ||||||| ||||||| |  |||||||||||| |||||||| || ||||||||||| |||||||||    
T  24784916 gaaatgtgcccggtgtggcaagaagggtcatacggtagctgactgcaagcgtaatgatattgtgtgtttcaattgcaatgaagagggtcacattggttct 24785015  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||||||||||||||||| |||||||||||||    
T  24785016 cagtgcaagcagcctaagaaggcgccgactact 24785048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 22435602 - 22435924
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| | | |||||||||| |||||||| ||||||     
T  22435602 gctcattacaaggttgtgaatgagcggaagactaagggccagcagagtcgccctaagccctatagtgcccctactgataagggaaaacagagaatggtca 22435701  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || ||  |          ||||||| ||||||  |||||  ||||||||||||||| |||||||||||||| |||||||||||||  ||||| |||||    
T  22435702 atgataggag----------aaggatgctcctgcgaagattgtctatttcaattgtggtgagaaaggccacaagagcaatgtttgtccagaggaggtaaa 22435791  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    |||||||||||| |||||||||||||| || | ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||    
T  22435792 gaaatgtttccgatgtggcaagaagggtcatacattagctgattgcaagcatagtgatattgtgtgcttcaattgcaaggaagagggtcacattggttct 22435891  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||||||||| |||||||||||||||||||||    
T  22435892 cagtgcaagcaacctaagagggcgccgactact 22435924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 17 - 342
Target Start/End: Original strand, 21228415 - 21228740
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||| | |||||||||||| |||||||| |||||||    
T  21228415 gctcattacaaggttgtgaatgagcagaagactaagggccagcagagtcgccctaagccctatagtgcccctgctgataagggtaaacagagaatggtcg 21228514  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || ||||||||||| ||||||| |||||| ||||||   | |||||| |||||||||||||||||||| || |||||||||||||  ||  | ||    
T  21228515 atgataggcggcctaagaagaaggatgctcctgcggagattgtttgtttcaactgtggcgagaaaggccacaagagtaatgtttgtcttgtagagatcaa 21228614  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||||||| || |||||||||||||||| || ||  |||||||||||||||    |||||||||||||||||||||||| ||||||||||||||||||||     
T  21228615 gaaatgtgtcaggtgtggcaagaagggtcaaattgtagctgattgcaagcgaaatgatattgtgtgcttcaattgtaatgaagagggtcatattggttcc 21228714  T
Q  317 cagtgcaagcagcctaagagggcgcc 342  Q
    || |||||||||||||||||||||||    
T  21228715 caatgcaagcagcctaagagggcgcc 21228740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 16 - 348
Target Start/End: Original strand, 17041874 - 17042205
Alignment:
Q  16 agctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtc 115  Q
    |||||||||||||||||| |||||| || ||||||||||||| ||||||||||||||||| |||||||| | ||||||||||||||| ||||| ||||||    
T  17041874 agctcattacaaggttgttaatgagaggaagactaagggccagcagagtcgccctaagccttatagtgcccctgctgataagggcaagcagagaatggtc 17041973  T
Q  116 gaggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaa 215  Q
    || || || ||||||||||| ||||||| |||| | ||||||   | |||||| ||||||| |||||||||||| || ||||||| || ||| ||  | |    
T  17041974 gatgataggcggcctaagaagaaggatgctccttcggagatt-tttgtttcaactgtggcgggaaaggccacaagagtaatgtttatcctgaagagatca 17042072  T
Q  216 agaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttc 315  Q
    |||||||| ||||||||||||||||||| || ||  ||||||||||||||     |||||||||||||||||||||||| ||||||||||||||  ||||    
T  17042073 agaaatgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagagaaatgatattgtgtgcttcaattgtaatgaagagggtcatataagttc 17042172  T
Q  316 tcagtgcaagcagcctaagagggcgccgactac 348  Q
     |||||||||||||| |||||| |||| |||||    
T  17042173 ccagtgcaagcagccgaagaggacgcctactac 17042205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 22496115 - 22496447
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||||| |||||||||||| |||| |||||||| ||||||| ||||||||| ||||| || | |||||||||||| |||||||| |||||||    
T  22496115 gctcattacaaggtcgtgaatgagcggaagacgaagggccaccagagtctccctaagccttatagcgcccctgctgataagggaaaacagagaatggtcg 22496214  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    || | |||||||| | ||| ||||||||||||| |||||||  ||  || |||| ||| |||||||||||||| ||| ||| |||||  |  || |||||    
T  22496215 agtatagacggccaaggaagaaggatgttcctgttgagattgtctgctttaattatggtgagaaaggccacaagagcgatgcttgtccgggagaggtaaa 22496314  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    || |||||| || ||||| |||||||| |||  | ||||||| ||||| |||  ||||||||||||||||||||| || ||||||||||| ||| ||||     
T  22496315 gagatgttttcgatgtggtaagaagggtcacgcactagctgagtgcaaacataatgatattgtgtgcttcaattgcaatgaagagggtcacattagttcg 22496414  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| ||||||||||||| |||||||||||||    
T  22496415 cagtgtaagcagcctaagaaggcgccgactact 22496447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 20081235 - 20081567
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||| | |||||||||||| ||||||| ||||| |||||||||| |||||| ||||| || | ||||||||||||||||||||| |||||||    
T  20081235 gctcattacaagatcgtgaatgagcggaagactaacggccagcagagtcgccttaagccttatagcgcccctgctgataagggcaaacagagaatggtcg 20081334  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || ||||||||||| |||||||||| ||||||||||  ||  || |||||||| |||||||||||||| ||||||| |||||  |  || |||||    
T  20081335 atgataggcggcctaagaagaaggatgttcatgctgagattgtctgctttaattgtggtgagaaaggccacaagagcaatgcttgtccgggagaggtaaa 20081434  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    || |||||| || ||||| |||||||| || | | || |||| || |||| |  ||| ||||||||||||||||| || ||||| ||||| ||||||||     
T  20081435 gagatgttttcgctgtggaaagaagggtcatacactatctgagtgtaagcgtaatgacattgtgtgcttcaattgcaatgaagaaggtcacattggttcg 20081534  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| | || |||||||| |||||||||||||    
T  20081535 cagtgtacgcggcctaagaaggcgccgactact 20081567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 22402092 - 22401760
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||| |||| ||||||||| |||||||||| || ||||||||||||||||| || ||||| | ||||||||||||||||||||| |||||||    
T  22402092 gctcattacaagattgtaaatgagcggaagactaagggtcagcagagtcgccctaagccttacagtgcccctgctgataagggcaaacagagaatggtcg 22401993  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || ||||| |||||||| ||||||| |||||| || |||  || ||| | |||||| |||||||||||||| || |||| ||||| || |||    ||    
T  22401992 aagatagacgacctaagaagaaggatgctcctgcagaaattttctgttttacttgtggtgagaaaggccacaagagtaatgcttgtcctggggataccaa 22401893  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    || |||||| || ||||| |||||||  ||   | ||||||| ||||| |||| |||||| || |||||||||||||| ||||||||||| ||||||||     
T  22401892 gagatgttttcgctgtggaaagaaggatcatgcactagctgagtgcaaacatgatgatatagtatgcttcaattgtaatgaagagggtcacattggttcg 22401793  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||||||| ||||||||| ||||||| |||||    
T  22401792 cagtgcaagaagcctaagaaggcgccggctact 22401760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 17 - 203
Target Start/End: Complemental strand, 21176867 - 21176681
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||| | |||||||| | ||||||||||||||||||||| |||||||    
T  21176867 gctcattacaaggttgtgaatgagcggaagactaagggccagcagagtagccctaagacatatagtgcccctgctgataagggcaaacagagaatggtcg 21176768  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtc 203  Q
    | || || ||||||||||| ||||||| |||||  ||||||  || | | |||||||| ||||||| |||||| |||||||||||||    
T  21176767 atgataggcggcctaagaagaaggatgctcctgtggagattgtctgtattaattgtggtgagaaagtccacaagagcaatgtttgtc 21176681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 23 - 349
Target Start/End: Original strand, 41350536 - 41350859
Alignment:
Q  23 tacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcgaggaaa 122  Q
    |||||||| ||||||||| || ||  |||||| || |||||||| |||||||| || ||||| |  ||||| ||||| ||||||| ||||||||| |  |    
T  41350536 tacaaggtagtgaatgagaggaagggtaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaagggtaaacagaagatggtcgatgtta 41350635  T
Q  123 gacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatg 222  Q
    | ||||||||||| |||||||   |||| ||||||   |  ||||||||||| |||||||||||||| ||||| |  |||  ||||||| | ||||| ||    
T  41350636 ggcggcctaagaagaaggatg---ctgcagagattgtgtgcttcaattgtggtgagaaaggccacaagagcaacgcctgttctgaggaaatcaagaagtg 41350732  T
Q  223 tttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgc 322  Q
    | |||||||||| |||||||| ||  |  ||||||||||||| | ||  || ||||||||||| |||||||| | ||| ||||| ||| ||||||||||     
T  41350733 tgtccggtgtggtaagaagggtcatgtcgtagctgattgcaatcgtgcagacattgtgtgctttaattgtaatggagaaggtcacattagttctcagtgt 41350832  T
Q  323 aagcagcctaagagggcgccgactact 349  Q
    |  ||||||||||||||||||||||||    
T  41350833 actcagcctaagagggcgccgactact 41350859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 51330354 - 51330683
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||| || ||  |||||| || |||||||| |||||||| || ||||| | ||||||||| || ||||||| ||||||||    
T  51330354 gctcactacaaggtagtgaatgagaggaagggtaagggacagcagagtcgtcctaagccgtacagtgcccctgctgataaagggaaacagaagatggtcg 51330453  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||||||   | |||||||||||| |||| ||||||||| ||||| || || | ||||||| | ||    
T  51330454 atgtcaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggagagagaggccacaaaagcaacgtctgccctgaggaaatcaa 51330550  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||||||||| || ||  |  ||||||||||||| | |   || ||||| ||||| ||||| || | ||||||||| ||| ||||     
T  51330551 gaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtacagacattgtttgctttaattgcaacggagagggtcacattagttca 51330650  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  51330651 cagtgtactcagcctaagagggcgccgactact 51330683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 21833799 - 21833470
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||| || ||   ||||| || |||||||| |||||||| || ||||| |  |||||||| || ||| ||| ||||||||    
T  21833799 gctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgataaagggaaatagaagatggtcg 21833700  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||||||   | |||||||||||| |||||||||||||| ||||| || || | ||||||| | ||    
T  21833699 atgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgagaaaggccacaaaagcaacgtctgccctgaggaaatcaa 21833603  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||||||||| || ||  |  ||||||||||||| | |   || ||||||||||| ||||| || | ||||||||| ||| ||||     
T  21833602 gaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtacggacattgtgtgctttaattgcaacggagagggtcacattagttca 21833503  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  21833502 cagtgtactcagcctaagagggcgccgactact 21833470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 16347457 - 16347786
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||| || ||   ||||| || |||||||| |||||||| || ||||| |  ||||| ||||| ||||||| ||||||||    
T  16347457 gctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaagggtaaacagaagatggtcg 16347556  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||||||||||   |  ||||||||||| |||||||||||||| ||||| |  |||  ||||||| | ||    
T  16347557 acgttaggcggcctaagaagaaggatg---ctgctgagattgtgtgcttcaattgtggtgagaaaggccacaagagcaacgcctgttctgaggaaatcaa 16347653  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||| |||||||| ||  |  |||||||||| || | ||  || ||||||||||| || || || | ||| ||||| ||| |||||    
T  16347654 gaagtgtgtccggtgtggtaagaagggtcatgtcgtagctgattgtaatcgtgcagacattgtgtgctttaactgcaatggagaaggtcacattagttct 16347753  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  16347754 cagtgtactcagcctaagagggcgccgactact 16347786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 33387891 - 33388220
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||  || ||   ||||| || |||||||| |||||||| || ||||| |  ||||| || || ||||||| ||||||||    
T  33387891 gctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaaggtaaacagaagatggtcg 33387990  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||||||   | |||||||||||| |||||||||||||| ||||| ||||| |  |||||| | ||    
T  33387991 atgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgagaaaggccacaaaagcaacgtttgcccggaggaaatcaa 33388087  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||||||||| || ||  |  ||||||||||||| | |   || ||||||||||| ||||| || | ||||||||| ||| ||||     
T  33388088 gaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtacagacattgtgtgctttaattgcaatggagagggtcacattagttca 33388187  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  33388188 cagtgtactcagcctaagagggcgccgactact 33388220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 50 - 349
Target Start/End: Complemental strand, 21842676 - 21842380
Alignment:
Q  50 aagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcgaggaaagacggcctaagaataaggatgttcctg 149  Q
    ||||| || |||||||| |||||||| || ||||| |  |||||||| || ||||||| ||||||||| || |||||||||||||| |||||||   ||     
T  21842676 aagggacatcagagtcgtcctaagccgtacagtgcccccgctgataaagggaaacagaagatggtcgatgatagacggcctaagaagaaggatg---cta 21842580  T
Q  150 ctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacat 249  Q
    ||||||||   | |||||||||||| | |||||||||||| |||||||| || | ||||||| | ||||| ||| |||| ||||||||||| || || ||    
T  21842579 ctgagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtctgccctgaggaaatcaagaagtgtgtccgatgtggcaagaaaggtcatat 21842480  T
Q  250 attagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
      |||| || ||||||| |   || |||||||| || || || || | ||||||||| ||| ||||  |||| |  ||||||||||||||||||||||||    
T  21842479 tgtagccgaatgcaagcgtacggacattgtgtgttttaactgcaatggagagggtcacattagttcatagtgtactcagcctaagagggcgccgactact 21842380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 50 - 349
Target Start/End: Complemental strand, 19109834 - 19109536
Alignment:
Q  50 aagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcgaggaaagacggcctaagaataaggatgttcctg 149  Q
    ||||| ||||||||||| |||||||| || ||||| | ||||||||| || |||||||||||||| || || || ||||||||||| |||||||   ||     
T  19109834 aagggacaacagagtcgtcctaagccgtacagtgcccctgctgataaagggaaacagaggatggttgatgataggcggcctaagaagaaggatg---cta 19109738  T
Q  150 ctgagattacctattt--caattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccac 247  Q
    | ||||||   | |||  ||||||| | | |||||| ||| | |||||||| |||| ||| ||  | ||||| ||| ||||||||||||||||||| ||     
T  19109737 ccgagattgtgtgtttttcaattgttgtgtgaaaggtcactaaagcaatgtctgtcctgaagagatcaagaagtgtgtccggtgtggcaagaagggtcat 19109638  T
Q  248 atattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgacta 347  Q
    ||  ||||||||||||||| |   || |||||||| || || || || ||||||||||| ||| |||| ||||| |  ||||||||||||||||||||||    
T  19109637 attgtagctgattgcaagcgtaaggacattgtgtgttttaactgcaatgaagagggtcacattagttcacagtgtactcagcctaagagggcgccgacta 19109538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 59 - 349
Target Start/End: Complemental strand, 22400775 - 22400488
Alignment:
Q  59 cagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcgaggaaagacggcctaagaataaggatgttcctgctgagatta 158  Q
    |||||||| |||||||  || ||||| | ||||||||| || ||||||||||||||||| || || ||||||||||| | |||||   || ||||||||     
T  22400775 cagagtcgtcctaagctgtacagtgcccctgctgataaagggaaacagaggatggtcgatgataggcggcctaagaagatggatg---ctactgagattg 22400679  T
Q  159 cctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctga 258  Q
      | |||||||||||| | ||||||||| || || ||||| || | ||| ||  | ||||| ||| ||||||||||||||||||| || ||  |||| ||    
T  22400678 tgtgtttcaattgtggagggaaaggccataaaagtaatgtctgccctgaagagatcaagaagtgtgtccggtgtggcaagaagggtcatattgtagcgga 22400579  T
Q  259 ttgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
    |||||||| |   || || ||||| || || || || | ||||||||| ||| |||| ||||| |  ||||||||||||||||||||||||    
T  22400578 ttgcaagcgtacggacatcgtgtgttttaactgcaatggagagggtcacattagttcacagtgtactcagcctaagagggcgccgactact 22400488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 349
Target Start/End: Complemental strand, 21752546 - 21752215
Alignment:
Q  18 ctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcga 117  Q
    ||||||||||| |||||||||||||  |  ||||||| || |||||||| |||||||| || |||||   |||||||||||| ||||||||  |||| ||    
T  21752546 ctcattacaagattgtgaatgagcgaaaagctaagggtcagcagagtcgtcctaagccttacagtgccactgctgataagggaaaacagagagtggttga 21752447  T
Q  118 ggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaag 217  Q
     || || |  || |  || || |||| ||||| |||||||  ||  |  | |||||| ||||||||||| || ||||||| ||||  || ||| || |||    
T  21752446 agataggcacccgagaaagaaagatgctcctgatgagattgtctgctatacttgtggtgagaaaggccaaaagagcaatgcttgtactggggatgttaag 21752347  T
Q  218 aaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctc 317  Q
    |  ||||| || ||||| |||||||| ||   | ||||||| ||||| |||| |||||||||||| |||||||| || || || ||||| |||||||| |    
T  21752346 aggtgttttcgctgtggtaagaagggtcatgcactagctgagtgcaaacatgatgatattgtgtgtttcaattgcaacgaggaaggtcacattggttcac 21752247  T
Q  318 agtgcaagcagcctaagagggcgccgactact 349  Q
    |||||||| ||||||||| || || |||||||    
T  21752246 agtgcaagaagcctaagaaggtgcagactact 21752215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 272 - 348
Target Start/End: Complemental strand, 21176673 - 21176597
Alignment:
Q  272 gatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactac 348  Q
    |||||||||||||||||||| || |||||||||||||||||||| || |||||||||||||||||| |||| |||||    
T  21176673 gatattgtgtgcttcaattgcaatgaagagggtcatattggttcccaatgcaagcagcctaagaggacgcctactac 21176597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 108
Target Start/End: Complemental strand, 16379594 - 16379503
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagag 108  Q
    ||||||||||||||||||||||||||| |    ||||| ||||||||||| |||||||| || |||||   |||||||||||||||||||||    
T  16379594 gctcattacaaggttgtgaatgagcggaaaggcaagggtcaacagagtcgtcctaagccttacagtgcctctgctgataagggcaaacagag 16379503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 112
Target Start/End: Original strand, 24096465 - 24096569
Alignment:
Q  8 gacatcaaagctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacaga 107  Q
    |||| ||||||||||||||||||   || ||||||    | |||||| ||||||||||| ||||| || |||||||||| |||||| || || |||||||    
T  24096465 gacaccaaagctcattacaaggtgacgagtgagcgaagaagtaagggacaacagagtcgtcctaaaccttatagtgctcctgctgacaaaggaaaacaga 24096564  T
Q  108 ggatg 112  Q
    |||||    
T  24096565 ggatg 24096569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 16379348 - 16379262
Alignment:
Q  263 aagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||||| |||||||||||| |||||||| || ||||||||||| |||| ||| || || ||| |||| |||| ||| | |||||||    
T  16379348 aagcatgatgatattgtgtgtttcaattgcaatgaagagggtcacattgtttcgcaatgtaagaagccaaagaaggctcagactact 16379262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 109
Target Start/End: Complemental strand, 19857773 - 19857713
Alignment:
Q  49 taagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagagg 109  Q
    |||||| ||||||||||| ||||| || |||||||||| |||||| ||||| || ||||||    
T  19857773 taagggacaacagagtcgtcctaaaccatatagtgctcctgctgacaagggtaagcagagg 19857713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 180; Significance: 4e-97; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 17 - 348
Target Start/End: Original strand, 229642 - 229973
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||||||||||||||| || ||||||||| ||| |||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||    
T  229642 gctcattacaaggttgtgaatgagaggaagactaaggaccagcagagtcgccctaagccctatagtgcccctgctgataagggcaaacagagaatggtcg 229741  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || |||||||| || ||||||| |||||| ||||||   | |||||||||||| |||||||||||||| |||||||||||||  || ||  ||||    
T  229742 atgataggcggcctaataagaaggatgctcctgcggagattgtttgtttcaattgtggtgagaaaggccacaagagcaatgtttgtccagaagagataaa 229841  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||||||| ||||||||||||||||||| || ||| ||||||||||||||| |  ||||||||||||||||||||| || ||||||||||||||||||||     
T  229842 gaaatgtgtccggtgtggcaagaagggtcatataatagctgattgcaagcttaatgatattgtgtgcttcaattgcaacgaagagggtcatattggttcc 229941  T
Q  317 cagtgcaagcagcctaagagggcgccgactac 348  Q
    || ||||||||||| ||||||||||| |||||    
T  229942 caatgcaagcagccgaagagggcgcctactac 229973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 628 - 296
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||| | |||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  628 gctcattacaagatggtgaatgagcggaagactaagggccagcagagtcgccctaagccctatagtgctcctgctgataagggcaaacagagaatggtcg 529  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || || |||||||| ||| ||| |||||||||||||  || ||| |||||||| |||||||||||||| |||||||||| ||   | || |||||    
T  528 atgataggcgacctaagaagaagaatgctcctgctgagattgtctgttttaattgtggtgagaaaggccacaagagcaatgtttttccgaaagaggtaaa 429  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
     | |||||||| |||||| |||||||| ||   |||||||||||||||||||  ||||||||||||||||||||| || ||||||||||||||| |||||    
T  428 aagatgtttccagtgtggtaagaagggtcatgcattagctgattgcaagcataatgatattgtgtgcttcaattgcaaagaagagggtcatattagttct 329  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||||||||||||||||| |||||||||||||    
T  328 cagtgcaagcagcctaagaaggcgccgactact 296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 177; Significance: 2e-95; HSPs: 2)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 17 - 337
Target Start/End: Original strand, 14831 - 15151
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||    
T  14831 gctcattacaaggttgtgaatgagcggaagactaagggccagcagagtcgccctaagccctatagtgcccctgctgataagggcaaacagagaatggtcg 14930  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || | ||||||||| ||||||| |||| | ||||||  || ||| |||||||| |||||||||||||| |||||||||||||  || ||  ||||    
T  14931 atgataggcagcctaagaagaaggatgctcctacggagattgtctgttttaattgtggtgagaaaggccacaagagcaatgtttgtccagaagagataaa 15030  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||||||| ||||||||||||||||||| || ||| ||||||||||||||| |  |||||||||||| |||||||| || ||||||||||||||||||||     
T  15031 gaaatgtgtccggtgtggcaagaagggtcatatagtagctgattgcaagcgtaatgatattgtgtgattcaattgcaatgaagagggtcatattggttcc 15130  T
Q  317 cagtgcaagcagcctaagagg 337  Q
    || ||||||||||||||||||    
T  15131 caatgcaagcagcctaagagg 15151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 17 - 337
Target Start/End: Original strand, 11146 - 11466
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||  |||||||||||||||||| | ||||||||||||||||||||| |||||||    
T  11146 gctcattacaaggttgtgaatgagcggaagactaagggccaacaaagttaccctaagccctatagtgcccctgctgataagggcaaacagagaatggtcg 11245  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || | ||||||||| ||||||| |||| | ||||||  || ||| |||||||| |||||||||||||| |||||||||||||  || ||  ||||    
T  11246 atgataggcagcctaagaagaaggatgctcctacggagattgtctgttttaattgtggtgagaaaggccacaagagcaatgtttgtccagaagagataaa 11345  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||||||| ||||||||||||||||||| || ||| ||||||||||||||| |  |||||||||||| |||||||| || ||||||||||||||||||||     
T  11346 gaaatgtgtccggtgtggcaagaagggtcatatagtagctgattgcaagcgtaatgatattgtgtgattcaattgcaatgaagagggtcatattggttcc 11445  T
Q  317 cagtgcaagcagcctaagagg 337  Q
    || ||||||||||||||||||    
T  11446 caatgcaagcagcctaagagg 11466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 177; Significance: 2e-95; HSPs: 5)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 32393 - 32061
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||| || |||||||    
T  32393 gctcattacaaggttgtgaatgagcggaagactaagggccagcagagtcgccctaagccctatagcgcccttgctgataagggcaaacaaagaatggtcg 32294  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || ||||||||||| ||||||| |||||||||||||  || ||| ||||||||||||||||||||||| ||||||| ||||| ||  || |||||    
T  32293 atgataggcggcctaagaagaaggatgctcctgctgagattgtctgttttaattgtggcgagaaaggccacaagagcaatgcttgtcctggagaggtaaa 32194  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
     | ||||||||||||||| |||||| | ||   ||||||||||||||| |||  |||||||||||| ||| || | || ||||||||||| |||||||||    
T  32193 aagatgtttccggtgtggtaagaagagtcatgcattagctgattgcaaacataatgatattgtgtgtttcgatcgcaacgaagagggtcacattggttct 32094  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||||||||||||||||| |||||||||||||    
T  32093 cagtgcaagcagcctaagaaggcgccgactact 32061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 16 - 347
Target Start/End: Original strand, 10028 - 10358
Alignment:
Q  16 agctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtc 115  Q
    ||||||||||||| |||| ||||||  |||||| ||||| || |||||||||||||| || |||||||| ||||||||||||||||| ||||| ||||||    
T  10028 agctcattacaagattgttaatgagaagtagaccaagggtcagcagagtcgccctaaaccttatagtgcccttgctgataagggcaagcagagaatggtc 10127  T
Q  116 gaggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaa 215  Q
    || || || ||||| ||||| ||||||| |||||| || |||   | |||||| | ||||| |||||||||||| || |||||||||| ||| ||  | |    
T  10128 gatgataggcggccaaagaagaaggatgctcctgcggatattgtttgtttcaactatggcgggaaaggccacaagagtaatgtttgtcctgaagagatca 10227  T
Q  216 agaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttc 315  Q
    |||||||| |||||||||| |||||||| || ||  |||||||||||||||||  |||||||||||||||||||||||| ||||| ||||| ||||||||    
T  10228 agaaatgtgtccggtgtggtaagaagggtcatattgtagctgattgcaagcataatgatattgtgtgcttcaattgtaatgaaga-ggtcacattggttc 10326  T
Q  316 tcagtgcaagcagcctaagagggcgccgacta 347  Q
     || |||| |||||||||||||||||| ||||    
T  10327 acaatgcacgcagcctaagagggcgcctacta 10358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 16 - 347
Target Start/End: Original strand, 12683 - 13013
Alignment:
Q  16 agctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtc 115  Q
    ||||||||||||| |||| ||||||  |||||| ||||| || |||||||||||||| || |||||||| ||||||||||||||||| ||||| ||||||    
T  12683 agctcattacaagattgttaatgagaagtagaccaagggtcagcagagtcgccctaaaccttatagtgcccttgctgataagggcaagcagagaatggtc 12782  T
Q  116 gaggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaa 215  Q
    || || || ||||| ||||| ||||||| |||||| || |||   | |||||| | ||||| |||||||||||| || |||||||||| ||| ||  | |    
T  12783 gatgataggcggccaaagaagaaggatgctcctgcggatattgtttgtttcaactatggcgggaaaggccacaagagtaatgtttgtcctgaagagatca 12882  T
Q  216 agaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttc 315  Q
    |||||||| |||||||||| |||||||| || ||  |||||||||||||||||  |||||||||||||||||||||||| ||||| ||||| ||||||||    
T  12883 agaaatgtgtccggtgtggtaagaagggtcatattgtagctgattgcaagcataatgatattgtgtgcttcaattgtaatgaaga-ggtcacattggttc 12981  T
Q  316 tcagtgcaagcagcctaagagggcgccgacta 347  Q
     || |||| |||||||||||||||||| ||||    
T  12982 acaatgcacgcagcctaagagggcgcctacta 13013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 55151 - 54819
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||| | |||||||||||| |||||||| ||||||| ||||||| |||||| |||||||| | |||||||||| ||||||||||||||||||    
T  55151 gctcattacaagatggtgaatgagcggaagactaagtgccaacaaagtcgccataagccttatagtgcccctgctgataagagcaaacagaggatggtcg 55052  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || |||||||| ||||| ||||||| ||||||| |||||   | |||   || | | ||||| |||||||| || |||| ||||| |  ||| || ||    
T  55051 aagatagacggccgaagaagaaggatgctcctgctaagattgtttgtttttcttattgtgagaagggccacaagagtaatggttgtcctagggacgtcaa 54952  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    || |||||| || ||||| ||||| || ||   |  |||||| ||||| |||| |||||||||||| || ||||| || ||||||||||| ||||||||     
T  54951 gagatgttttcgctgtggaaagaaaggtcatgcacgagctgagtgcaaacatgatgatattgtgtgttttaattgcaatgaagagggtcacattggttcg 54852  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
     |||| ||| ||||||||| ||||||| |||||    
T  54851 tagtgtaagaagcctaagaaggcgccggctact 54819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 167 - 349
Target Start/End: Complemental strand, 37709 - 37527
Alignment:
Q  167 aattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagc 266  Q
    ||||||||||||||||||||||| ||||||| ||||| ||  || ||||| | ||||||||||||||| |||||| | ||   ||||||||||||||| |    
T  37709 aattgtggcgagaaaggccacaagagcaatgcttgtcctggagaggtaaaaagatgtttccggtgtggtaagaagagtcatgcattagctgattgcaaac 37610  T
Q  267 atggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
    ||  |||||||||||| ||| || | || ||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  37609 ataatgatattgtgtgtttcgatcgcaacgaagagggtcacattggttctcagtgcaagcagcctaagaaggcgccgactact 37527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 176; Significance: 9e-95; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 14 - 349
Target Start/End: Original strand, 15366 - 15701
Alignment:
Q  14 aaagctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatgg 113  Q
    |||||||||||||| ||||| |||||| || |||||||| |||| |||||| ||||||||||||||||||| |  |||||||||||||||||||| ||||    
T  15366 aaagctcattacaatgttgtaaatgagtggaagactaagcgccagcagagttgccctaagccctatagtgccccagctgataagggcaaacagagaatgg 15465  T
Q  114 tcgaggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagt 213  Q
    |||| || || ||||||||||| ||||||| |||||| ||||| | || |||||||||||| |||||||||||||| |||||| ||||||  ||||| |     
T  15466 tcgatgataggcggcctaagaagaaggatgctcctgcggagatcatctgtttcaattgtggtgagaaaggccacaagagcaatttttgtccagaggaggc 15565  T
Q  214 aaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggt 313  Q
    |||||| ||||||||||||||||||||||| || | ||||||||||||||||||   ||| ||||||||||||||||| || || ||||||||||| |||    
T  15566 aaagaagtgtttccggtgtggcaagaagggtcatacattagctgattgcaagcacaatgacattgtgtgcttcaattgcaatgatgagggtcatatcggt 15665  T
Q  314 tctcagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||||||||||||||||||||||||||| ||||||    
T  15666 tctcagtgcaagcagcctaagagggcgccaactact 15701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 176; Significance: 9e-95; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 7 - 342
Target Start/End: Complemental strand, 665 - 330
Alignment:
Q  7 ggacatcaaagctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacag 106  Q
    ||||| || |||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||| |||||| | | || ||||||||||||||||    
T  665 ggacaccagagctcattacaaggttgttaatgagcggaagactaagggccagcagagtcgccctaagccttatagttcccctgttgataagggcaaacag 566  T
Q  107 aggatggtcgaggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttg 206  Q
    |||||||||||||| ||||| || ||||| ||||||||||||| ||||||||| | |||||||||||| |||||||||||||| || | || ||||| ||    
T  565 aggatggtcgaggagagacgacccaagaaaaaggatgttcctgttgagattacttgtttcaattgtggtgagaaaggccacaagagtactgcttgtcgtg 466  T
Q  207 aggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtca 306  Q
    |||| || ||| | ||||||||||||||||||||||| |||| ||||| |||||||||||||| ||| || |||||||| ||||| || || ||||||||    
T  465 aggaggtgaaggagtgtttccggtgtggcaagaagggtcacacattagttgattgcaagcatgctgacatcgtgtgctttaattgcaaagaggagggtca 366  T
Q  307 tattggttctcagtgcaagcagcctaagagggcgcc 342  Q
    ||||||||| || |||||||||||||||| ||||||    
T  365 tattggttcccaatgcaagcagcctaagaaggcgcc 330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0550 (Bit Score: 170; Significance: 3e-91; HSPs: 1)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 88 - 349
Target Start/End: Original strand, 10019 - 10280
Alignment:
Q  88 tgctgataagggcaaacagaggatggtcgaggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccac 187  Q
    |||||| ||||| |||||||| |||||||| || |||||||||||||| ||||||| |||| | ||||||  || |||||||||||| ||||||||||||    
T  10019 tgctgacaagggaaaacagagaatggtcgatgatagacggcctaagaagaaggatgctcctacggagattgtctgtttcaattgtggtgagaaaggccac 10118  T
Q  188 aacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttca 287  Q
    || |||||||||||||| ||||| |||||||||||||||||||||||||||||||| || | |||||||||||| |||||| ||||||||||||||||||    
T  10119 aagagcaatgtttgtctagaggaggtaaagaaatgtttccggtgtggcaagaagggtcatacattagctgattgtaagcatagtgatattgtgtgcttca 10218  T
Q  288 attgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10219 attgcaaggaagagggtcacattggttctcagtgcaagcagcctaagagggcgccgactact 10280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1881 (Bit Score: 168; Significance: 5e-90; HSPs: 1)
Name: scaffold1881
Description:

Target: scaffold1881; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 17 - 348
Target Start/End: Original strand, 270 - 601
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||| |||| ||| | |||||||||||||||||| || |||||||    
T  270 gctcattacaaggttgtgaatgagcggaagaccaagggccagcagagtcgccctaagccttatattgcccctgctgataagggcaaacaaagaatggtcg 369  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || ||||||||||| ||||||| |||| | ||||||   | ||||||||||||||||||||||||||| ||||||||||||| ||||||  | ||    
T  370 atgataggcggcctaagaagaaggatgctcctacggagattgtttgtttcaattgtggcgagaaaggccacaagagcaatgtttgtcctgaggagatcaa 469  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||||||| ||||||||||||||||||| || ||  ||| |||||||||||    |||||||||||||||||||| ||| ||||||||||||||||||||     
T  470 gaaatgtgtccggtgtggcaagaagggtcatattgtagatgattgcaagcgaaatgatattgtgtgcttcaattttaatgaagagggtcatattggttcc 569  T
Q  317 cagtgcaagcagcctaagagggcgccgactac 348  Q
    || ||||||||||| ||||||||||| |||||    
T  570 caatgcaagcagccaaagagggcgcctactac 601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 166; Significance: 8e-89; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 16 - 349
Target Start/End: Complemental strand, 13513836 - 13513503
Alignment:
Q  16 agctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtc 115  Q
    |||||||||||||||||| |||||| || |||| |||||||| ||||||||||||||||| |||||||| | || |||||||||||| ||||| |||||     
T  13513836 agctcattacaaggttgttaatgagaggaagaccaagggccagcagagtcgccctaagccttatagtgcccctgttgataagggcaagcagagaatggtt 13513737  T
Q  116 gaggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaa 215  Q
    || || || ||||||||||| ||||||| |||||| ||||||  || |||||| |||||||||||||||||||| ||||||||||||| ||| ||  | |    
T  13513736 gatgataggcggcctaagaagaaggatgctcctgcagagattgtctgtttcaactgtggcgagaaaggccacaagagcaatgtttgtcctgaagagatca 13513637  T
Q  216 agaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttc 315  Q
    |||||||| ||||||||||||||||||| || ||  |||||||||||||||    |||||||||||||||||||||||| ||||||||||||||||||||    
T  13513636 agaaatgtgtccggtgtggcaagaagggtcatattatagctgattgcaagcgaaatgatattgtgtgcttcaattgtaatgaagagggtcatattggttc 13513537  T
Q  316 tcagtgcaagcagcctaagagggcgccgactact 349  Q
     || ||||||||||||||||||| ||| ||||||    
T  13513536 ccaatgcaagcagcctaagagggtgcctactact 13513503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 16 - 348
Target Start/End: Original strand, 18604345 - 18604677
Alignment:
Q  16 agctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtc 115  Q
    |||||||||||||||||| |||||| || ||||||||||||| ||||||||||||||||| |||| ||| | ||||||||||||||| ||||| ||||||    
T  18604345 agctcattacaaggttgttaatgagaggaagactaagggccagcagagtcgccctaagccttataatgcccctgctgataagggcaagcagagaatggtc 18604444  T
Q  116 gaggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaa 215  Q
    || || || ||||||||||| ||||||| |||| | |||||||  | ||| || |||||||||||||||||||| || |||||||||| ||| ||  | |    
T  18604445 gatgataggcggcctaagaagaaggatgctccttcggagattatttgttttaactgtggcgagaaaggccacaagagtaatgtttgtcctgaagagatca 18604544  T
Q  216 agaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttc 315  Q
    |||||||| ||||||||||||| ||||| |  ||  |||||||||||||||    |||||||||||||||||||||||| || |||||||||||||||||    
T  18604545 agaaatgtgtccggtgtggcaaaaagggtcttattgtagctgattgcaagcgaaatgatattgtgtgcttcaattgtaacgaggagggtcatattggttc 18604644  T
Q  316 tcagtgcaagcagcctaagagggcgccgactac 348  Q
     || ||||||| ||| ||||||| ||| |||||    
T  18604645 ccaatgcaagcggccgaagagggagcctactac 18604677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 17 - 243
Target Start/End: Original strand, 18224000 - 18224226
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||| |||||||| | || |||||||||||||||||| |||||||    
T  18224000 gctcattacaaggttgtgaatgagcggaagaccaagggccagcagagtcgccctaagccttatagtgcccctgttgataagggcaaacagagaatggtcg 18224099  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || |||||||||||||| ||||||| |||||| ||||||   | |||||| ||||||||||||||||||||  | |||||||||| ||| ||  | ||    
T  18224100 atgatagacggcctaagaagaaggatgctcctgcggagattgtttgtttcaactgtggcgagaaaggccacaagtgtaatgtttgtcctgaagagatcaa 18224199  T
Q  217 gaaatgtttccggtgtggcaagaaggg 243  Q
    ||||||| |||||||||||||||||||    
T  18224200 gaaatgtgtccggtgtggcaagaaggg 18224226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 16248203 - 16248388
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||| | ||||||||||||| ||||||| |||||||    
T  16248203 gctcattacaaggttgtgaatgagcagaagactaagggccagcagagtcgccctaagccctatagtgcccctgctgataagggccaacagagaatggtcg 16248302  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgt 202  Q
    | || || ||||||||||| ||||||| |||  |||||||||| | |||||||| ||| |||||||||||||| || |||||||||    
T  16248303 atgataggcggcctaagaagaaggatgctccaactgagattacatgtttcaattatggtgagaaaggccacaagagtaatgtttgt 16248388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 7 - 156
Target Start/End: Original strand, 16350259 - 16350408
Alignment:
Q  7 ggacatcaaagctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacag 106  Q
    ||||| ||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||    
T  16350259 ggacaccaaagctcattacaaggttgtaaatgagcggaagactaagggccagcagagtcgccctaagccctatagtgcccctgctgataagggcaaacag 16350358  T
Q  107 aggatggtcgaggaaagacggcctaagaataaggatgttcctgctgagat 156  Q
    || |||||||| || || ||||||||||| ||||||| |||||| |||||    
T  16350359 agaatggtcgatgataggcggcctaagaagaaggatgctcctgcggagat 16350408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 17 - 348
Target Start/End: Original strand, 14300509 - 14300837
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||| || ||   ||||| || |||||||| |||||||| || ||||| | ||||||||| || ||||||| ||||||||    
T  14300509 gctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccctgctgataaagggaaacagaagatggtcg 14300608  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||||||   | |||||||||||| |||||||||||||| ||||| || || ||||||||| | ||    
T  14300609 atgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgagaaaggccacaaaagcaacgtctgccttgaggaaatcaa 14300705  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||||||||| || ||  |  ||||||||||||| | |   || ||||| ||||| ||||| || | ||||||||| ||| ||||     
T  14300706 gaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtacggacattgtttgctttaattgcaacggagagggtcacattagttca 14300805  T
Q  317 cagtgcaagcagcctaagagggcgccgactac 348  Q
     |||| |  |||||||||||||||||||||||    
T  14300806 tagtgtactcagcctaagagggcgccgactac 14300837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 50 - 349
Target Start/End: Complemental strand, 14684016 - 14683720
Alignment:
Q  50 aagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcgaggaaagacggcctaagaataaggatgttcctg 149  Q
    ||||| || |||||||| |||||||| || ||||| | ||||||||| || ||||||||||||||||| || || ||||||||||| |||||||   ||     
T  14684016 aagggacagcagagtcgtcctaagccatacagtgcccctgctgataaagggaaacagaggatggtcgatgataggcggcctaagaagaaggatg---cta 14683920  T
Q  150 ctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacat 249  Q
    | ||||||   | |||||||||||| | |||||||||||| ||| |||| |||| ||| ||  | ||||| ||| ||||||||||||||||||| || ||    
T  14683919 ccgagattgtgtgtttcaattgtggtgggaaaggccacaaaagctatgtctgtcctgaagagatcaagaagtgtgtccggtgtggcaagaagggtcatat 14683820  T
Q  250 attagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
      ||||||||||||||| |   || |||||||| || || || || |||||||| |||||| ||||  |||| |  ||||||||||||||||||||||||    
T  14683819 tgtagctgattgcaagcgtaaggacattgtgtgttttaactgcaatgaagagggacatattagttcatagtgtactcagcctaagagggcgccgactact 14683720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 15144475 - 15144587
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||| ||||| || | ||||||||||||||||||||| |||||||    
T  15144475 gctcattacaaggtcgtgaatgagcggaagactaagggccagcagagtcgccctaagccttatagcgcccctgctgataagggcaaacagagaatggtcg 15144574  T
Q  117 aggaaagacggcc 129  Q
    | || ||||||||    
T  15144575 aagatagacggcc 15144587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 8050153 - 8050482
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||  || ||   ||||| || |||||||| |||||||| || ||||| | ||||||||| || ||||||| ||||||||    
T  8050153 gctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccctgctgataaagggaaacagaagatggtcg 8050252  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  |||||||||||||| | |||||   |||| ||||||   | |||||||||||| ||||| |||||||| ||||| || || | ||||||| | ||    
T  8050253 atgtgagacggcctaagaagagggatg---ctgcagagattgtgtgtttcaattgtggtgagaagggccacaagagcaacgtctgccctgaggaaatcaa 8050349  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| | |||||||||||||| || ||  |  ||||||||||||| | |   || ||||||||||| ||||| || | ||||||||| ||| ||||     
T  8050350 gaagtgtgttcggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtacagacattgtgtgctttaattgcaatggagagggtcacattagttca 8050449  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  8050450 cagtgtactcagcctaagagggcgccgactact 8050482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 215 - 348
Target Start/End: Original strand, 16250575 - 16250708
Alignment:
Q  215 aagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggtt 314  Q
    ||||||||| ||||||||||||||||||| || ||  ||| ||||||||||| |  |||||||||||||||||||||||| |||||||||||||| ||||    
T  16250575 aagaaatgtgtccggtgtggcaagaagggtcatattgtagttgattgcaagcgtaatgatattgtgtgcttcaattgtaatgaagagggtcatataggtt 16250674  T
Q  315 ctcagtgcaagcagcctaagagggcgccgactac 348  Q
    | || ||||||||| | ||||||||||| |||||    
T  16250675 cccaatgcaagcagtcgaagagggcgcctactac 16250708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 182 - 349
Target Start/End: Original strand, 15144584 - 15144751
Alignment:
Q  182 ggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgt 281  Q
    |||||||| ||||||| || ||| |  || ||||||| ||||||||| ||||| |||||||||||   | ||||||| ||||| |||  |||||||||||    
T  15144584 ggccacaagagcaatgcttctctgggagaggtaaagagatgtttccgatgtggtaagaagggccatgcactagctgagtgcaaacataatgatattgtgt 15144683  T
Q  282 gcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||||| ||||| ||||||||||| |||||||| ||||| |||| |||||||| |||||||||||||    
T  15144684 gcttcaactgtaatgaagagggtcacattggttcgcagtgtaagctgcctaagaaggcgccgactact 15144751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 17091679 - 17092008
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||  || ||   ||||| || |||||||| |||||||| || ||||| |  ||||| || || ||||||| ||||||||    
T  17091679 gctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaagggaaacagaagatggtcg 17091778  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||||||   | |||||||||||| |||||||||||||| ||||| || || | ||||||| | ||    
T  17091779 atgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgagaaaggccacaagagcaacgtctgccctgaggaaatcaa 17091875  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||| |||||||| ||  |  ||||||||||||| | |   || ||||| ||||| ||||| || | ||||||||| ||| ||||     
T  17091876 gaagtgtgtccggtgtggtaagaagggtcatgttgtagctgattgcaaccgtacagacattgtttgctttaattgcaatggagagggtcacattagttca 17091975  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  17091976 cagtgtactcagcctaagagggcgccgactact 17092008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 19635618 - 19635289
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||| || ||   ||||| || |||||| | |||||||| || ||||| |  |||||||| || ||||||||||||||||    
T  19635618 gctcactacaaggtagtgaatgagaggaagggcaagggacagcagagttgtcctaagccgtacagtgcccccgctgataaagggaaacagaggatggtcg 19635519  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || ||||||||||| |||||||   |||| ||||||   | |||||||||||| | |||||||||||| |||||||| || | ||| ||| | ||    
T  19635518 atgataggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtatgccctgaagaaatcaa 19635422  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| | |||||||||||||| || || ||  ||||||| ||||||| |   || |||||||| || || || || | ||||||||| ||| ||||     
T  19635421 gaagtgtgttcggtgtggcaagaaaggtcatattgtagctgaatgcaagcgtacggacattgtgtgttttaactgcaatggagagggtcacattagttca 19635322  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  |||||||||| |||||||||||||    
T  19635321 cagtgtactcagcctaagaaggcgccgactact 19635289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 8389894 - 8389565
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||  || ||   ||||| || |||||||| |||||||| || ||||| |  ||||| ||||| ||||||| ||||||||    
T  8389894 gctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaagggtaaacagaagatggtcg 8389795  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || || |||||||| |||||||   |||| ||||||   |  ||||||||||| |||||||||||||| ||||| |  |||| ||||||| | ||    
T  8389794 atgttaggcgacctaagaagaaggatg---ctgcagagattgtgtgcttcaattgtggtgagaaaggccacaagagcaacgcctgtcctgaggaaatcaa 8389698  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||| |||||||| ||  |  ||||||||||||| | |   || ||||| ||||| ||||| || | ||||||||| ||| ||||     
T  8389697 gaagtgtgtccggtgtggtaagaagggtcatgttgtagctgattgcaaccgtacagacattgtttgctttaattgcaatggagagggtcacattagttca 8389598  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  8389597 cagtgtacccagcctaagagggcgccgactact 8389565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 23959229 - 23958900
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||  || ||   ||||| || |||||||| |||||||| || ||||| |  ||||| || || ||||||| ||||||||    
T  23959229 gctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaaggtaaacagaagatggtcg 23959130  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||||||   |  ||||||||||| |||||||||||||| ||||| |  || | ||||||| | ||    
T  23959129 atgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgcttcaattgtggtgagaaaggccacaagagcaacgcctgccctgaggaaatcaa 23959033  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||| ||||| || ||  |  ||||||||||||| | |   |||||||||||||| ||||| || | ||||||||| ||| ||||     
T  23959032 gaagtgtgtccggtgtggtaagaaaggtcatgttgtagctgattgcaatcgtacagatattgtgtgctttaattgcaatggagagggtcacattagttca 23958933  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  23958932 cagtgtactcagcctaagagggcgccgactact 23958900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 49 - 349
Target Start/End: Complemental strand, 14162923 - 14162623
Alignment:
Q  49 taagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcgaggaaagacggcctaagaataaggatgttcct 148  Q
    |||||| ||||||||||| |||||||| || ||||||| |||||||||||| |||||||| ||||||||||| || || ||||  |  || |||| ||||    
T  14162923 taagggacaacagagtcgtcctaagccttacagtgctcctgctgataagggtaaacagagaatggtcgaggataggcgccctagaaggaaagatgctcct 14162824  T
Q  149 gctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccaca 248  Q
    | |||||||  ||  |    |||||| | |||||||||||| ||  ||| ||||| || ||| || |||| |||||| || ||||| ||||| || || |    
T  14162823 gttgagattgtctgctatgcttgtggtgtgaaaggccacaagagtgatgcttgtcctggggatgtgaagagatgttttcgctgtggtaagaaaggtcata 14162724  T
Q  249 tattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactac 348  Q
     | | ||||| || |||||||  ||| |||||||||| ||||| || || || ||||| |||||||| |||||||| |||||||||| ||||| ||||||    
T  14162723 cacttgctgagtgtaagcatgaagatgttgtgtgctttaattgcaatgaggaaggtcacattggttcgcagtgcaaacagcctaagaaggcgcagactac 14162624  T
Q  349 t 349  Q
    |    
T  14162623 t 14162623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 12480082 - 12479753
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||  || ||   ||||| || |||||||| |||||||| || ||||| |  ||||| || || ||||||| ||||||||    
T  12480082 gctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaagggaaacagaagatggtcg 12479983  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||  |||||||   |||| ||||||   | |||||||||||| ||||||||||| || ||||| || || | ||||||| | ||    
T  12479982 atgttaggcggcctaagaggaaggatg---ctgcagagattgtgtgtttcaattgtggtgagaaaggccataagagcaacgtctgccctgaggaaatcaa 12479886  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||||||||| || ||  |  ||||||||||||| | |   || ||||| ||||| ||||| || | ||||||||| ||| ||||     
T  12479885 gaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtacagacattgtttgctttaattgcaacggagagggtcacattagttca 12479786  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  12479785 cagtgtactcagcctaagagggcgccgactact 12479753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 16233522 - 16233851
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||  || ||   ||||| || |||||||| |||||||| || ||||| |  ||||| || || ||||| | ||||||||    
T  16233522 gctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaagggaaacaaaagatggtcg 16233621  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||||||   || ||||||||||| |||||||||||||| ||||| |  |||| ||||||| | ||    
T  16233622 atgttaggcggcctaagaagaaggatg---ctgcagagattgtgtacttcaattgtggtgagaaaggccacaagagcaacgcctgtcctgaggaaatcaa 16233718  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||| |||||||| ||  |  | ||||||||||| | |   || ||||| ||||| ||||| || | ||||||||| ||| ||||     
T  16233719 gaagtgtgtccggtgtggtaagaagggtcatgtggtggctgattgcaaccgtacagacattgtttgctttaattgcaacggagagggtcacattagttca 16233818  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  16233819 cagtgtactcagcctaagagggcgccgactact 16233851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 19775323 - 19775652
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||  || ||   ||||| || |||||||| |||||||| || ||||| |  ||||| || || ||||||| ||||||||    
T  19775323 gctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaaggtaaacagaagatggtcg 19775422  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||||||   |  ||||||||||| |||||||||||||| ||||| |  || | ||||||| | ||    
T  19775423 atgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgattcaattgtggtgagaaaggccacaagagcaacgcctgccctgaggaaatcaa 19775519  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||| ||||| || ||  |  ||||||||||||| | |   || ||||||||||| ||||| || | ||||||||| ||| ||||     
T  19775520 gaagtgtgtccggtgtggtaagaaaggtcatgttgtagctgattgcaatcgtacagacattgtgtgctttaattgcaatggagagggtcacattagttca 19775619  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  19775620 cagtgtactcagcctaagagggcgccgactact 19775652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 27714818 - 27714489
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||  || ||   ||||| || |||||||| |||||||| || ||||| |  ||||| || || ||||||| ||||||||    
T  27714818 gctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaaggtaaacagaagatggtcg 27714719  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||||||   |  ||||||||||| |||||||||||||| ||||| |  || | ||||||| | ||    
T  27714718 atgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgcttcaattgtggtgagaaaggccacaagagcaacgcctgccctgaggaaatcaa 27714622  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||||||||||||||| || ||  |  ||||||||||||| | |   || ||||||||||| ||||| || | ||||||||| ||| ||||     
T  27714621 gaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtacggacattgtgtgctttaattgcaatggagagggtcacattagttca 27714522  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||| ||||||||||||||||||||    
T  27714521 cagtgtactcagtctaagagggcgccgactact 27714489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 349
Target Start/End: Complemental strand, 40476478 - 40476193
Alignment:
Q  61 gagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcgaggaaagacggcctaagaataaggatgttcctgctgagattacc 160  Q
    |||||| |||||||| || ||||| | ||||||||| || ||||||| ||||||||| || || ||||||||||| |||||||   || ||||||||       
T  40476478 gagtcgtcctaagccgtacagtgcccctgctgataaagggaaacagaagatggtcgatgataggcggcctaagaagaaggatg---ctactgagattgtg 40476382  T
Q  161 tatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgatt 260  Q
    | |||||||||||| | |||||||||||| ||||| || || | ||| ||| | ||||| ||| | | |||||||||||| || || ||  ||||||| |    
T  40476381 tgtttcaattgtggtgggaaaggccacaaaagcaacgtctgccctgaagaaatcaagaagtgtgttcagtgtggcaagaaaggtcatattgtagctgaat 40476282  T
Q  261 gcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
    |||||| |   || |||||||| || || || || | ||||||||| ||| |||| ||||| |  | ||||||||||||||||||||||    
T  40476281 gcaagcgtacggacattgtgtgttttaactgcaacggagagggtcacattagttcacagtgtactcggcctaagagggcgccgactact 40476193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 273 - 348
Target Start/End: Original strand, 18224229 - 18224304
Alignment:
Q  273 atattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactac 348  Q
    ||||||| |||||||||||||| ||||||||||||||||||||  | ||||||||||||||||||||||| |||||    
T  18224229 atattgtatgcttcaattgtaatgaagagggtcatattggttcctaatgcaagcagcctaagagggcgcctactac 18224304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 315
Target Start/End: Complemental strand, 8520 - 8224
Alignment:
Q  18 ctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcga 117  Q
    ||||||||||| |||||||||||||  |  | || || || |||||||| |||||||| || ||||||| |||||||||||| |||||||| ||||| ||    
T  8520 ctcattacaagattgtgaatgagcgaaaagccaaaggtcagcagagtcgtcctaagccttacagtgctcctgctgataagggtaaacagagaatggttga 8421  T
Q  118 ggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaag 217  Q
     || || || ||||  || || |||| ||||| |||||||  ||  |  | |||||| |||||||||||||| || |||| ||||| || ||| |||||     
T  8420 tgagaggcgccctataaagaaagatgctcctgttgagattgtctgctatacttgtggtgagaaaggccacaagagtaatgcttgtcctg-ggatgtaaaa 8322  T
Q  218 aaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttc 315  Q
    | |||||| || | ||| ||||| || ||   | ||||||| ||||| |||| ||||||||||||||| || || || || || |||||||| |||||    
T  8321 agatgttttcgctatggtaagaaaggtcatgcactagctgagtgcaaacatgatgatattgtgtgctttaactgcaatgaggaaggtcatataggttc 8224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 349
Target Start/End: Original strand, 15564 - 15894
Alignment:
Q  18 ctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcga 117  Q
    ||||||||||| |||||||||||||  |    || || || |||||||| |||||| | || ||||||| |||||||||||| |||||||| ||||| ||    
T  15564 ctcattacaagattgtgaatgagcgaaaagtcaaaggtcagcagagtcgtcctaagacttacagtgctcctgctgataagggtaaacagagaatggttga 15663  T
Q  118 ggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaag 217  Q
     || || || ||||  || || |||| ||||| |||||||  ||  |  | |||||| |||||||||||||| || |||| || || || ||| |||||     
T  15664 tgagaggcgccctagaaagaaagatgctcctgttgagattgtctgctatacttgtggtgagaaaggccacaagagtaatgcttatcctg-ggatgtaaaa 15762  T
Q  218 aaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctc 317  Q
    | |||||| || | ||| ||||| || ||   | ||||||| ||||| |||| ||||||||||||||| || || || || || ||||||||  |||| |    
T  15763 agatgttttcgctatggtaagaaaggtcatgcactagctgagtgcaaacatgatgatattgtgtgctttaactgcaatgaggaaggtcatataagttcac 15862  T
Q  318 agtgcaagcagcctaagagggcgccgactact 349  Q
    | |||||| ||| ||||| ||||| |||||||    
T  15863 aatgcaagaagcttaagaaggcgcagactact 15894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 215 - 335
Target Start/End: Complemental strand, 13879396 - 13879276
Alignment:
Q  215 aagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggtt 314  Q
    ||||| || ||||| ||||| ||||||||||| |   ||||||| ||||||| |||| ||||||| |||||||||||| | ||||| |||||| |  |||    
T  13879396 aagaagtgcttccgatgtggaaagaagggccatacgatagctgaatgcaagcgtggtcatattgtttgcttcaattgtgacgaagaaggtcatctcagtt 13879297  T
Q  315 ctcagtgcaagcagcctaaga 335  Q
    | ||||| ||| |||||||||    
T  13879296 cacagtgtaagaagcctaaga 13879276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 335
Target Start/End: Complemental strand, 8708919 - 8708844
Alignment:
Q  260 tgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaaga 335  Q
    ||||||| |||||||||||| |||||||||||| | ||||| || ||| || |||| ||||||||| |||||||||    
T  8708919 tgcaagcgtggtgatattgtttgcttcaattgtgacgaagaaggccatcttagttcgcagtgcaagaagcctaaga 8708844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 266 - 349
Target Start/End: Complemental strand, 16219424 - 16219341
Alignment:
Q  266 catggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
    |||| |||| |||||||||| ||||| || ||||| |||||||||||||| || |||||| ||||| |||  ||||||||||||    
T  16219424 catgatgatgttgtgtgctttaattgcaatgaagaaggtcatattggttcgcaatgcaagaagcctgagaaagcgccgactact 16219341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 266 - 349
Target Start/End: Complemental strand, 16222744 - 16222661
Alignment:
Q  266 catggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
    |||| |||| |||||||||| ||||| || ||||| |||||||||||||| || |||||| ||||| |||  ||||||||||||    
T  16222744 catgatgatgttgtgtgctttaattgcaatgaagaaggtcatattggttcgcaatgcaagaagcctgagaaagcgccgactact 16222661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 335
Target Start/End: Complemental strand, 15073646 - 15073526
Alignment:
Q  215 aagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggtt 314  Q
    ||||| |||||  ||||||| ||||| || |||| ||||||||||||||||| | ||||| |||| ||||  |||||| | ||||| ||||||||  | |    
T  15073646 aagaagtgttttaggtgtggaaagaaaggacacacattagctgattgcaagctttgtgatgttgtttgctataattgtgatgaagaaggtcatataagct 15073547  T
Q  315 ctcagtgcaagcagcctaaga 335  Q
    | ||||||| | |||||||||    
T  15073546 cacagtgcaggaagcctaaga 15073526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2059 (Bit Score: 164; Significance: 1e-87; HSPs: 1)
Name: scaffold2059
Description:

Target: scaffold2059; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 17 - 348
Target Start/End: Original strand, 559 - 890
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||||||||||||||||||||||||| |||| |||| | | ||||||||||||||||| |||||||| | ||||||||||||||||||||| |||||||    
T  559 gctcattacaaggttgtgaatgagcggaagaccaaggacaagcagagtcgccctaagccttatagtgcccctgctgataagggcaaacagagaatggtcg 658  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || ||||||||||| | ||||| ||| ||||||||||| | |||||||||||| ||||||| |||||| || |||||||||| ||  ||  | ||    
T  659 atgataggcggcctaagaagagggatgctccagctgagattacttgtttcaattgtggtgagaaagaccacaagagtaatgtttgtcctgtagagatcaa 758  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||||||| ||||||||||||||||||| || ||  |||||||||||||||    |||||||||||||||||||||||| ||||||||||||||||||||     
T  759 gaaatgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgaaatgatattgtgtgcttcaattgtaacgaagagggtcatattggttcc 858  T
Q  317 cagtgcaagcagcctaagagggcgccgactac 348  Q
    || ||||||||||| ||||||||||| |||||    
T  859 caatgcaagcagccgaagagggcgcctactac 890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 164; Significance: 1e-87; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 7 - 318
Target Start/End: Complemental strand, 312 - 1
Alignment:
Q  7 ggacatcaaagctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacag 106  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||| | |||||||||||| ||||||    
T  312 ggacaccaaagctcattacaaggttgtgaatgagcggaagactaagggccggcagagtcgccctaagccctatagtgcccctgctgataagggaaaacag 213  T
Q  107 aggatggtcgaggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttg 206  Q
    || |||||||| || || ||||||||||| ||||||| |||||| ||||||  || |||||||||||| |||||||||||||| ||||||||||||| ||    
T  212 agaatggtcgatgataggcggcctaagaagaaggatgctcctgcagagattgtctgtttcaattgtggtgagaaaggccacaagagcaatgtttgtcctg 113  T
Q  207 aggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtca 306  Q
    |||| || |||||| |||| ||| |||||||||| || || | ||||| ||||||||||| |  ||| ||||||||||||||||| || || ||||||||    
T  112 aggaggtgaagaaaagttttcggcgtggcaagaaaggtcatacattagttgattgcaagcgtaatgacattgtgtgcttcaattgcaatgaggagggtca 13  T
Q  307 tattggttctca 318  Q
    ||||||||||||    
T  12 tattggttctca 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 164; Significance: 1e-87; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 17 - 348
Target Start/End: Complemental strand, 17674 - 17343
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||| || |||||||    
T  17674 gctcattacacggttgtgaatgagcggaagactaagggccagcagagtcgccctaagccctatagtgcccctgctgataagggcaaacatagaatggtcg 17575  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || ||||||||||| ||||||| |||||| ||||||  || |||||||||||| |||||||||||||| || ||||||||||  || ||  ||||    
T  17574 atgataggcggcctaagaagaaggatgctcctgcggagattgtctgtttcaattgtggtgagaaaggccacaagagtaatgtttgtccagaagagataaa 17475  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||||||| ||||||||||||| ||||| || ||| |||||||||   ||| |  ||||||||||||||||||||| || ||||||||||||||||||||     
T  17474 gaaatgtgtccggtgtggcaataagggtcatatagtagctgatttttagcgtaatgatattgtgtgcttcaattgcaatgaagagggtcatattggttcc 17375  T
Q  317 cagtgcaagcagcctaagagggcgccgactac 348  Q
    || ||||| || |||||||||||||| |||||    
T  17374 caatgcaaacaacctaagagggcgcctactac 17343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 3935 - 3606
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||| || ||   ||||| || |||||||| |||||||| || ||||| |  |||||||| || ||||||||||||||||    
T  3935 gctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgataaagggaaacagaggatggtcg 3836  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || ||||||||||| |||||||   || | ||||||   | |||||||||||| | |||||||||||| ||||| || || | ||| ||| | ||    
T  3835 atgataggcggcctaagaagaaggatg---ctacagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaacgtctgccctgaagaaatcaa 3739  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| | |||||||| ||||| || |  ||  ||||||| ||||||| |   || |||||||| || ||||| || | ||||||||| ||| ||||     
T  3738 gaagtgtgttcggtgtggtaagaaaggtcctattgtagctgaatgcaagcgtacggacattgtgtgttttaattgcaatggagagggtcacattagttca 3639  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  3638 cagtgtactcagcctaagagggcgccgactact 3606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 164; Significance: 1e-87; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 17 - 348
Target Start/End: Complemental strand, 22043378 - 22043047
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||||||||||||||||||||||||| |||| |||||||| ||||||| ||||||||| |||||||| | | |||| |||||||||||||| |||||||    
T  22043378 gctcattacaaggttgtgaatgagcggaagaccaagggccagcagagtcaccctaagccttatagtgcccctactgacaagggcaaacagagaatggtcg 22043279  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || ||||||||||| ||||||| |||  |||||||||| | |||||||||||| |||||||||||||| || ||||||||||  || ||  | ||    
T  22043278 atgataggcggcctaagaagaaggatgctccaactgagattacttgtttcaattgtggtgagaaaggccacaagagtaatgtttgtccagaagagatcaa 22043179  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||||||| | ||||||||||||||||| || ||  ||||||||||||||| |  |||||||||||||||||| ||||| ||||||||||||||||||||     
T  22043178 gaaatgtgttcggtgtggcaagaagggtcatattgtagctgattgcaagcgtaatgatattgtgtgcttcaactgtaatgaagagggtcatattggttcc 22043079  T
Q  317 cagtgcaagcagcctaagagggcgccgactac 348  Q
    || ||||||||||||||||||||||| |||||    
T  22043078 caatgcaagcagcctaagagggcgcctactac 22043047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 17 - 348
Target Start/End: Complemental strand, 15536934 - 15536603
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||| |||||||| | ||| ||||||||||| ||||| |||||||    
T  15536934 gctcattacaaggttgtgaatgagcggaagaccaagggccagcagagtcgccctaagccttatagtgcccctgccgataagggcaagcagagaatggtcg 15536835  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || ||||||||||| ||||||| |||| | |||||||  | ||| |||||||||||  |||||||||| || |||||||||| | | ||  | ||    
T  15536834 atgataggcggcctaagaagaaggatgctccttcggagattatttgttttaattgtggcgaagaaggccacaagagtaatgtttgtcctaaagagatcaa 15536735  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||||||| ||||||||||||| ||||| || ||  |||||||||||||||    ||||| |||||||||||||||||| ||||||||||||||||||||     
T  15536734 gaaatgtgtccggtgtggcaaaaagggtcatattgtagctgattgcaagcgaaatgatactgtgtgcttcaattgtaatgaagagggtcatattggttcc 15536635  T
Q  317 cagtgcaagcagcctaagagggcgccgactac 348  Q
    || ||||||||||| ||||||||||| |||||    
T  15536634 caatgcaagcagccgaagagggcgcctactac 15536603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 17 - 348
Target Start/End: Original strand, 30310374 - 30310705
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||||||||||||||||||||||||| |||| ||||| || |||||||||||||| || |||||||| | ||||||||||||||||||||| |||||||    
T  30310374 gctcattacaaggttgtgaatgagcggaagaccaagggtcagcagagtcgccctaaaccttatagtgcccctgctgataagggcaaacagagaatggtcg 30310473  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || ||||| ||||| ||||||| |||||| || |||   | |||||| |||||||||||||||||||| || |||||||||| ||| ||  | ||    
T  30310474 atgataggcggccaaagaagaaggatgctcctgcggatattgtttgtttcaactgtggcgagaaaggccacaagagtaatgtttgtcctgaagagatcaa 30310573  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||||||| || |||||||||||||||| || ||  |||||||||||||||    ||||||||||||||||||||| || ||||||||||||||||||||     
T  30310574 gaaatgtgtctggtgtggcaagaagggtcatattgtagctgattgcaagcgaaatgatattgtgtgcttcaattgcaacgaagagggtcatattggttcc 30310673  T
Q  317 cagtgcaagcagcctaagagggcgccgactac 348  Q
    || || |||||||| |||| |||||| |||||    
T  30310674 caatgtaagcagccgaagaaggcgcctactac 30310705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 19981518 - 19981186
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||||| ||||||||| || ||||||||||||| ||||||||||||||||| ||||| || | |||||||||||||||| ||||||||||||    
T  19981518 gctcattacaaggtcgtgaatgagtggaagactaagggccagcagagtcgccctaagccttatagcgcccctgctgataagggcaaatagaggatggtcg 19981419  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgag-gaagtaa 215  Q
    | || || || || | ||| |||||||||||||||||||||  ||  || |||||||| |||||||||||||| ||||||| |||||  ||| || || |    
T  19981418 aagataggcgaccaaggaagaaggatgttcctgctgagattgtcttctttaattgtggtgagaaaggccacaagagcaatgcttgtc-cgagagaggtga 19981320  T
Q  216 agaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttc 315  Q
    | | ||||||||| ||||| |||||||| ||   | ||||||| ||||| |||  ||| |||||||||||||||||||| ||||||||||| ||||||||    
T  19981319 aaagatgtttccgatgtggtaagaagggtcatgcactagctgagtgcaaacataatgacattgtgtgcttcaattgtaatgaagagggtcacattggttc 19981220  T
Q  316 tcagtgcaagcagcctaagagggcgccgactact 349  Q
    |||||||||||||||||||| |||||||||||||    
T  19981219 tcagtgcaagcagcctaagaaggcgccgactact 19981186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 16 - 348
Target Start/End: Complemental strand, 32603697 - 32603365
Alignment:
Q  16 agctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtc 115  Q
    |||||||||||||||||| |||||| || ||||||||||||| ||||||||||||||||| |||||||| | ||||||||||||||| ||||| ||||||    
T  32603697 agctcattacaaggttgttaatgagaggaagactaagggccagcagagtcgccctaagccttatagtgcccctgctgataagggcaagcagagaatggtc 32603598  T
Q  116 gaggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaa 215  Q
    || || || || |||||||| ||||||| |||| | || |||   | |||||| ||||| | |||||||||||| || |||||||||||||| ||  | |    
T  32603597 gatgataggcgacctaagaagaaggatgctccttcggaaattgtttgtttcaactgtggtgggaaaggccacaagagtaatgtttgtcttgaagagatca 32603498  T
Q  216 agaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttc 315  Q
    |||||||| ||||||||||||||||||| || ||  ||||||||||||||     ||||||| |||||||||||||||| |||||||||||||| |||||    
T  32603497 agaaatgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagagaaatgatattctgtgcttcaattgtaatgaagagggtcatataggttc 32603398  T
Q  316 tcagtgcaagcagcctaagagggcgccgactac 348  Q
     |||||||||||||| |||||| |||| |||||    
T  32603397 ccagtgcaagcagccgaagaggacgcctactac 32603365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 21163760 - 21164100
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  21163760 gctcattacaagattgtgaatgagcggaagactaagggccaacaaagtcgccctaagccctatagtgcccctgctgataagggcaaacagaggatggtcg 21163859  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttg--------ag 208  Q
    |||| ||||| || | ||| ||||||| |||||||||||||  || ||| |||||||||||||||| |||||| ||||||| ||||| ||        |     
T  21163860 aggatagacgaccaaggaagaaggatgctcctgctgagattgtctgttttaattgtggcgagaaagaccacaagagcaatgcttgtcatggagagataaa 21163959  T
Q  209 gaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcata 308  Q
    ||  |||||| ||||||||| ||||| |||||||| ||   | | |||||||||||   |  ||| ||||||||||||||||| || ||||||||||| |    
T  21163960 gagataaagagatgtttccgatgtggtaagaagggtcatgcactggctgattgcaactgtaatgacattgtgtgcttcaattgcaatgaagagggtcaca 21164059  T
Q  309 ttggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
    |||||||||| |||||||| ||||||| |||||| ||||||    
T  21164060 ttggttctcaatgcaagcaacctaagaaggcgccaactact 21164100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 21391091 - 21391423
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||| | ||||||||| || ||||||||||||| ||||||||||||||||| |||||||| |||| ||||||||||||| |||| |||||||    
T  21391091 gctcattacaagatcgtgaatgagaggaagactaagggccagcagagtcgccctaagccttatagtgcccttgttgataagggcaaatagagaatggtcg 21391190  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || |||||||| | ||| ||||||| |||||||||||||   | |||   |||||| |||||||||||||| || |||| ||||| || ||| || ||    
T  21391191 aagatagacggccgaggaagaaggatgctcctgctgagattgtttgtttttcttgtggtgagaaaggccacaagagtaatgcttgtcctggggacgtcaa 21391290  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    || |||||| || ||||| |||||||| ||   | ||||||| ||||| |||| |||||| || |||||||||||||| ||||||||||| ||||||||     
T  21391291 gagatgttttcgctgtggaaagaagggtcatgcactagctgagtgcaaacatgatgatatagtatgcttcaattgtaatgaagagggtcacattggttca 21391390  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
     |||||||| ||||||||| |||||||||||||    
T  21391391 tagtgcaagaagcctaagaaggcgccgactact 21391423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 21780417 - 21780749
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||| | ||||||||| || ||||||||||||| ||||||||||||||||| |||||||| |||| ||||||||||||| |||| |||||||    
T  21780417 gctcattacaagatcgtgaatgagaggaagactaagggccagcagagtcgccctaagccttatagtgcccttgttgataagggcaaatagagaatggtcg 21780516  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || |||||||| | ||| ||||||| |||||||||||||   | |||   |||||| |||||||||||||| || |||| ||||| || ||| || ||    
T  21780517 aagatagacggccgaggaagaaggatgctcctgctgagattgtttgtttttcttgtggtgagaaaggccacaagagtaatgcttgtcctggggacgtcaa 21780616  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    || |||||| || ||||| |||||||| ||   | ||||||| ||||| |||| |||||| || |||||||||||||| ||||||||||| ||||||||     
T  21780617 gagatgttttcgctgtggaaagaagggtcatgcactagctgagtgcaaacatgatgatatagtatgcttcaattgtaatgaagagggtcacattggttca 21780716  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
     |||||||| ||||||||| |||||||||||||    
T  21780717 tagtgcaagaagcctaagaaggcgccgactact 21780749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 18880887 - 18881219
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||| | |||||||||||| |||||||||| || ||||||||||||||||| || ||||| | | ||||||||||||||||||| |||||||    
T  18880887 gctcattacaagatagtgaatgagcggaagactaagggtcagcagagtcgccctaagccttacagtgcccctactgataagggcaaacagagaatggtcg 18880986  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || |||||||||||||| ||||||| ||||||  | |||  || ||| | |||||| |||||||||||||| || |||| ||||| || |||    ||    
T  18880987 aagatagacggcctaagaagaaggatgctcctgcaaaaattgtctgttttacttgtggtgagaaaggccacaagagtaatgcttgtcctggggataccaa 18881086  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    || |||||| |  ||||| |||||||| ||   | ||||||| ||||| |||| |||||| || |||||||||||||| ||||||||||| ||||||||     
T  18881087 gagatgttttcactgtggaaagaagggtcatgcactagctgagtgcaaacatgatgatatagtatgcttcaattgtaatgaagagggtcacattggttca 18881186  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||||||| ||||||||| ||||||| |||||    
T  18881187 cagtgcaagaagcctaagaaggcgccggctact 18881219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 125 - 348
Target Start/End: Complemental strand, 22031545 - 22031323
Alignment:
Q  125 cggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtt 224  Q
    ||||||||||| ||||||| ||| ||||||||||| | |||||||||||| || |||||||| || ||||||||||||| | | ||  |||||||||||     
T  22031545 cggcctaagaagaaggatgctccagctgagattacttgtttcaattgtggtga-aaaggccataagagcaatgtttgtcctaaagagataaagaaatgtg 22031447  T
Q  225 tccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaa 324  Q
    ||||||||||||||||||| || ||  ||||||||||||||| |  |||||||||||||||||||||||| ||||| |||||||||||||| || |||||    
T  22031446 tccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaatgatattgtgtgcttcaattgtaatgaagaaggtcatattggttcccaatgcaa 22031347  T
Q  325 gcagcctaagagggcgccgactac 348  Q
    |||||||||||||||||| |||||    
T  22031346 gcagcctaagagggcgcctactac 22031323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 23 - 349
Target Start/End: Original strand, 19481311 - 19481634
Alignment:
Q  23 tacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcgaggaaa 122  Q
    |||||||| ||||||||| || ||  |||||| || |||||||| |||||||| || ||||| |  ||||| ||||| ||||||| ||||||||| |  |    
T  19481311 tacaaggtagtgaatgagaggaagggtaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaagggtaaacagaagatggtcgatgtta 19481410  T
Q  123 gacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatg 222  Q
    | ||||||||||| |||||||   |||| ||||||   |  ||||||||||| |||||||||||||| ||||| |  |||  ||||||| | ||||| ||    
T  19481411 ggcggcctaagaagaaggatg---ctgcagagattgtgtgcttcaattgtggtgagaaaggccacaagagcaacgcctgttctgaggaaatcaagaagtg 19481507  T
Q  223 tttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgc 322  Q
    | |||||||||| |||||||| ||  |  ||||||||||||| | ||  || ||||||||||| |||||||| | ||| ||||| ||| ||||||||||     
T  19481508 tgtccggtgtggtaagaagggtcatgtcgtagctgattgcaatcgtgcagacattgtgtgctttaattgtaatggagaaggtcacattagttctcagtgt 19481607  T
Q  323 aagcagcctaagagggcgccgactact 349  Q
    |  ||||||||||||||||||||||||    
T  19481608 actcagcctaagagggcgccgactact 19481634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 18860125 - 18859796
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||| || ||   ||||| || |||||||| |||||||| || ||||| |  |||||||| || |||||| |||||||||    
T  18860125 gctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgataaagggaaacaggggatggtcg 18860026  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || ||||||||||| |||||||   |||| ||||||   | |||||||||||| | |||||||||||| |||||||| || | ||| ||| | ||    
T  18860025 atgataggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtatgccctgaagaaatcaa 18859929  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| | |||||||||||||| || || ||  ||||||| ||||||| |   || |||||||| || ||||| || | ||||||||| ||| ||||     
T  18859928 gaagtgtgttcggtgtggcaagaaaggtcatattgtagctgaatgcaagcgtacagacattgtgtgttttaattgcaatggagagggtcacattagttca 18859829  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  18859828 cagtgtactcagcctaagagggcgccgactact 18859796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 20015496 - 20015825
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||  || ||   ||||| || |||||||| |||||||| || ||||| | ||||||||| || ||||||| ||||||||    
T  20015496 gctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccctgctgataaagggaaacagaagatggtcg 20015595  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  |||||||||||||| | |||||   |||| ||||||   | |||||||||||| ||||| |||||||| || || || || | ||||||| | ||    
T  20015596 atgtgagacggcctaagaagagggatg---ctgcagagattgtgtgtttcaattgtggtgagaagggccacaagagtaacgtctgccctgaggaaatcaa 20015692  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| | |||||||||||||| || ||  |  ||||||||||||| | |   || ||||||||||| ||||| || | ||||||||| ||| ||||     
T  20015693 gaagtgtgttcggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtacagacattgtgtgctttaattgcaatggagagggtcacattagttca 20015792  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  20015793 cagtgtactcagcctaagagggcgccgactact 20015825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 17671255 - 17671584
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||  || ||   ||||| || |||||||| |||||||| || ||||| |  ||||| || || ||||||| ||||||||    
T  17671255 gctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaaggtaaacagaagatggtcg 17671354  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||||||   | |||||||||||| |||||||||||||| |||||||| || |  |||||| | ||    
T  17671355 atgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgagaaaggccacaaaagcaatgtctgcccggaggaaatcaa 17671451  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| || ||||||||||||| || ||  |  ||||||||||||| | |   || ||||||||||| ||||| || | ||||||||| ||| ||||     
T  17671452 gaagtgtgtctggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtacagacattgtgtgctttaattgcaatggagagggtcacattagttca 17671551  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||| ||||||    
T  17671552 cagtgtactcagcctaagagggcgccaactact 17671584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 19115948 - 19115619
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||  || ||   ||||| || |||||||| |||||||| || ||||| | ||||||||| || ||||||| ||||||||    
T  19115948 gctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccctgctgataaagggaaacagaagatggtcg 19115849  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | |  || ||||||||||| |||||||   |||| ||| ||   |  |||||||||||||||||||||||||| ||||| |  |||| ||||||| | ||    
T  19115848 atgttaggcggcctaagaagaaggatg---ctgcagaggttgtgtgcttcaattgtggcgagaaaggccacaagagcaacgcctgtcctgaggaaatcaa 19115752  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||  |||||||||| |||||||| ||  |  | ||||||||||| | |   || ||||||||||| ||||| || | ||||||||| ||| ||||     
T  19115751 gaagtgcgtccggtgtggtaagaagggtcatgtggtggctgattgcaatcgtacagacattgtgtgctttaattgcaatggagagggtcacattagttca 19115652  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||| ||||||||||||||||||    
T  19115651 cagtgtactcagccaaagagggcgccgactact 19115619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 22126192 - 22126521
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||| || ||   ||||| || |||||||| |||||||| || ||||| |  |||||||| || ||||||||||||||||    
T  22126192 gctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgataaagggaaacagaggatggtcg 22126291  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || ||||||||||| |||||||   || | ||||||   | |||||||||||| | |||||||||||| ||||| || |  ||||| ||| | ||    
T  22126292 atgataggcggcctaagaagaaggatg---ctacagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaacgtcttccttgaagaaatcaa 22126388  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| | |||||||||||||| || || ||  ||||||| ||||||| |   || |||||||| || || || || | |||  |||| ||| ||||     
T  22126389 gaagtgtgttcggtgtggcaagaaaggtcatattgtagctgaatgcaagcgtacagacattgtgtgttttaactgcaatggagaaagtcacattagttca 22126488  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  22126489 cagtgtactcagcctaagagggcgccgactact 22126521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 22117408 - 22117737
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||||| ||||||||| || ||   ||||| || || ||||| |||||||| || ||||| |   ||||||| || |||||||| |||||||    
T  22117408 gctcactacaaggtagtgaatgagaggaagggcaagggacagcaaagtcgtcctaagccgtacagtgcccccactgataaagggaaacagagaatggtcg 22117507  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || |||||||||||||||||||   ||   ||||||   | ||||||| |||| | |||||||||||| ||||| || || | ||| ||| | ||    
T  22117508 atgataggcggcctaagaataaggatg---ctatagagattgtgtgtttcaatcgtggtgggaaaggccacaaaagcaacgtctgccctgaagaaatcaa 22117604  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| | |||||||||||||| || || ||  ||||||| ||||||| |   || |||||||| || || || || | ||||||||| ||| ||||     
T  22117605 gaagtgtgttcggtgtggcaagaaaggtcatattgtagctgaatgcaagcgtacggacattgtgtgttttaactgcaatggagagggtcacattagttca 22117704  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  22117705 cagtgtactcagcctaagagggcgccgactact 22117737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 291
Target Start/End: Complemental strand, 21672065 - 21671792
Alignment:
Q  18 ctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcga 117  Q
    ||||||||||| |||||||||||||  || | ||||| || |||||||| |||||||| || ||||||| |||||||||||| |||||||| ||||| ||    
T  21672065 ctcattacaagattgtgaatgagcgaaaggccaagggtcagcagagtcgtcctaagccttacagtgctcctgctgataagggtaaacagagaatggtaga 21671966  T
Q  118 ggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaag 217  Q
     || || ||  |||  || || |||| ||||| |||||||  ||  |  | |||||| |||||||||||||| || |||| ||||| || ||| || |||    
T  21671965 tgataggcgctctagaaagaaagatgctcctgttgagattgtctgctatacttgtggtgagaaaggccacaagagtaatgcttgtcctggggatgtgaag 21671866  T
Q  218 aaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattg 291  Q
    |  ||||| || ||||| || ||||| ||   | ||||||| |||||  ||| ||||||||||||||| |||||    
T  21671865 aggtgttttcgctgtggtaaaaagggtcatgcactagctgagtgcaaagatgatgatattgtgtgctttaattg 21671792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 22421123 - 22421455
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||| |||||||||||||| |    || || || |||||||| || ||||| || ||||||| |||| |||||||||||||||| ||||| |    
T  22421123 gctcattacaagattgtgaatgagcggaaagtcaaaggtcagcagagtcgtccaaagccttacagtgctcctgctaataagggcaaacagagaatggttg 22421222  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || ||||||| ||| || |||| | | | ||| |||  ||  |  | |||||| |||||||||||||| || |||| ||||| || ||| || ||    
T  22421223 atgagaggcggcctaggaagaaagatgcttcggttgatattgtctgctatacttgtggtgagaaaggccacaaaagtaatgcttgtcctggggatgtgaa 22421322  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
        || || || |||||||||||||| || | | | ||||| || || |||| ||||||||||||||| ||||| || || || || |||||||| ||     
T  22421323 acggtgctttcgttgtggcaagaagggacatacacttgctgagtgtaaacatgatgatattgtgtgctttaattgcaatgaggaaggacatattgggtcg 22421422  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    || |||||| ||||||||| ||||| |||||||    
T  22421423 caatgcaagaagcctaagaaggcgcagactact 22421455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 214 - 335
Target Start/End: Complemental strand, 22374223 - 22374102
Alignment:
Q  214 aaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggt 313  Q
    |||||| |||||  ||||||| ||||| || |||| ||||||||||||||||| |||||||||||| ||||  |||||| | ||||| ||||||||| |     
T  22374223 aaagaagtgttttaggtgtggaaagaaaggacacacattagctgattgcaagcgtggtgatattgtttgctataattgtgatgaagaaggtcatattagc 22374124  T
Q  314 tctcagtgcaagcagcctaaga 335  Q
    || ||||||| | |||||||||    
T  22374123 tcgcagtgcaggaagcctaaga 22374102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 254 - 341
Target Start/End: Complemental strand, 22523824 - 22523737
Alignment:
Q  254 gctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgc 341  Q
    ||||| || ||||||| ||||||||||||||||||||| || || || ||||| |||||||| || |||||| ||||||||| |||||    
T  22523824 gctgagtgtaagcatgatgatattgtgtgcttcaattgcaatgaggaaggtcacattggttcgcaatgcaagaagcctaagaaggcgc 22523737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 335
Target Start/End: Complemental strand, 20391394 - 20391319
Alignment:
Q  260 tgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaaga 335  Q
    ||||||| |||||||||||| |||||||||||| | ||||| |||||| || |||| ||||||| | |||||||||    
T  20391394 tgcaagcgtggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaagcctaaga 20391319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 109
Target Start/End: Complemental strand, 21928983 - 21928887
Alignment:
Q  13 caaagctcattacaaggttgtgaatgagcggtagac-taagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagagg 109  Q
    ||||||||||||||||||  ||| |||||| ||||  |||||| ||||||||||| ||||| || |||||||||| |||||| || || |||||||||    
T  21928983 caaagctcattacaaggtgatgagtgagcg-tagaggtaagggacaacagagtcgtcctaaaccgtatagtgctcctgctgacaaaggaaaacagagg 21928887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 335
Target Start/End: Complemental strand, 19985503 - 19985413
Alignment:
Q  245 cacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaaga 335  Q
    |||| ||||||||||||||||  ||| ||| |||| ||||  |||||| | |||||||| |||||| | || ||||||||| |||||||||    
T  19985503 cacacattagctgattgcaagagtggggatgttgtttgctataattgtgatgaagaggggcatattagctcacagtgcaagaagcctaaga 19985413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 113
Target Start/End: Complemental strand, 28984471 - 28984366
Alignment:
Q  8 gacatcaaagctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacaga 107  Q
    |||| |||||||||||||||| || ||| |||| ||  |  |||||| ||||||| ||| |||||||| || ||||||| ||| || ||||| || ||||    
T  28984471 gacaccaaagctcattacaagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgcggacaagggaaagcaga 28984372  T
Q  108 ggatgg 113  Q
    ||||||    
T  28984371 ggatgg 28984366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1459 (Bit Score: 163; Significance: 5e-87; HSPs: 2)
Name: scaffold1459
Description:

Target: scaffold1459; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 17 - 243
Target Start/End: Original strand, 882 - 1108
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| | |||||||||| ||| |||||||||||| |    
T  882 gctcattacaaggttgtgaatgagcggaagactaagggccaacagagttgccctaagccctatagtgcccctgctgataagcgcacacagaggatggtag 981  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    ||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||| ||| |||| ||||||||  ||||| |||||    
T  982 aggaaagacggcctaagaagaaggatgttcctactgagattacctgtttcaattgtggcgagaaaggccgcaagagcattgtttgtccagaggaggtaaa 1081  T
Q  217 gaaatgtttccggtgtggcaagaaggg 243  Q
    |||||||||||||||||||||||||||    
T  1082 gaaatgtttccggtgtggcaagaaggg 1108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1459; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 1105 - 1154
Alignment:
Q  300 agggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||    
T  1105 agggtcatattggttctcagtgcaagcatccgaagagggcgccgactact 1154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 160; Significance: 3e-85; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 17 - 348
Target Start/End: Complemental strand, 14938 - 14607
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||||||| ||||||||||||||||| |||| |||||||| ||||||||||||||||| |||||||| | ||||||||||||||||||||| |||||||    
T  14938 gctcattactaggttgtgaatgagcggaagaccaagggccagcagagtcgccctaagccttatagtgcccctgctgataagggcaaacagagaatggtcg 14839  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || |  ||||||||||| ||||||| |||||| ||||||   | |||||| ||||||||||| |||||||| || |||||||||||||| ||  | ||    
T  14838 atgatatgcggcctaagaagaaggatgctcctgcggagattgtttgtttcaagtgtggcgagaatggccacaagagtaatgtttgtcttgaagagatcaa 14739  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||||||| ||||||||||||||||| | || ||  ||||||||||||||| |  |||||| || |||||||||||||| ||||||||||||||||||||     
T  14738 gaaatgtgtccggtgtggcaagaagagtcatattgtagctgattgcaagcgtaatgatatcgtatgcttcaattgtaatgaagagggtcatattggttcc 14639  T
Q  317 cagtgcaagcagcctaagagggcgccgactac 348  Q
    || ||||||||||| ||||||||||| |||||    
T  14638 caatgcaagcagccgaagagggcgcctactac 14607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 156; Significance: 8e-83; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 17 - 348
Target Start/End: Complemental strand, 5512 - 5181
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||    
T  5512 gctcattacaaggttgtgaatgagcggaagaccaagggccagcagagtcgccctaagccttatagtgcccttgctgataagggcaaacagagaatggtcg 5413  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || ||||||||||| ||||||| |||||| ||||||   | |||||| ||||||||||| ||||| || || |||||||||| ||| ||  | ||    
T  5412 atgataggcggcctaagaagaaggatgctcctgcggagattgtttgtttcaactgtggcgagaagggccataagagtaatgtttgtcctgaagagatcaa 5313  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||||||| || |||||||||||||||| || ||  |||||||||||||||    |||||||||||| |||||||| || ||||||||||||||||||||     
T  5312 gaaatgtgtctggtgtggcaagaagggtcatattgtagctgattgcaagcgaaatgatattgtgtggttcaattgcaatgaagagggtcatattggttcc 5213  T
Q  317 cagtgcaagcagcctaagagggcgccgactac 348  Q
    || ||||||||||| |||||||| || |||||    
T  5212 caatgcaagcagccgaagagggcacctactac 5181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 153; Significance: 5e-81; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 7447 - 7779
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||| |||||||||||||| ||||||| ||||| ||||||||||||||||| || ||||| | ||||||||||||||||||||| |||||||    
T  7447 gctcattacaagattgtgaatgagcggaagactaaaggccagcagagtcgccctaagccttacagtgcccctgctgataagggcaaacagagaatggtcg 7546  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || ||||||||||| |||||||||||||||||||||  ||  || |||||||| |||||||||||||| |||||| ||||||  || || |||||    
T  7547 aagataggcggcctaagaagaaggatgttcctgctgagattgtctgctttaattgtggtgagaaaggccacaagagcaatatttgtccggaagaggtaaa 7646  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    || || |||||| ||||| |||||||| ||   | ||| ||| ||||| | |  ||||||||||||||||||||| || ||||||||||| |||||||||    
T  7647 gagatatttccgatgtggtaagaagggtcatgcactagatgagtgcaaacttaatgatattgtgtgcttcaattgcaatgaagagggtcacattggttct 7746  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    | ||||||||||||||||| |||||||||||||    
T  7747 cggtgcaagcagcctaagaaggcgccgactact 7779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 150; Significance: 3e-79; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 554 - 222
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||| ||||| || | |||||||||||||||||||||||||||||    
T  554 gctcattacaaggttgtgtatgagcggaagactaagggccagcagagtcgccctaagccttatagcgcccctgctgataagggcaaacagaggatggtcg 455  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgt-cttgaggaagtaa 215  Q
    | || || ||||| | ||| |||||||||||||||||||||   | ||| |||||||| |||||||||||||| ||||||| |||| | ||| || || |    
T  454 aagataggcggccaaggaagaaggatgttcctgctgagattgtttgttttaattgtggtgagaaaggccacaagagcaatgcttgtccgtga-gaggtta 356  T
Q  216 agaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttc 315  Q
    | | ||||||||| | ||| |||||||| ||   | ||||||| ||||| |||  ||| |||||||||||||||||||| ||||||||||| ||||||||    
T  355 aaagatgtttccgatttggtaagaagggtcattcactagctgagtgcaaacataatgacattgtgtgcttcaattgtaatgaagagggtcacattggttc 256  T
Q  316 tcagtgcaagcagcctaagagggcgccgactact 349  Q
    |||||||||||||||||||| |||||||||||||    
T  255 tcagtgcaagcagcctaagaaggcgccgactact 222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 149; Significance: 1e-78; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 22118 - 21786
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||| |||||||||||||| ||||||||||||| | |||||| | ||||||||||||||| | ||||  |||||||||||||||||||||||    
T  22118 gctcattacaagattgtgaatgagcggaagactaagggccagctgagtcgtcttaagccctatagtgcccctgcttttaagggcaaacagaggatggtcg 22019  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || |||||||| | ||| ||||||| |||||||||||||  || ||| |||||||| |||||||||||||| | ||||| ||||| |   ||  ||||    
T  22018 atgatagacggccaaggaagaaggatgctcctgctgagattgtctgttttaattgtggtgagaaaggccacaagatcaatgcttgtcctcgagagataaa 21919  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    || ||||||||| ||||| |||||||| ||   | ||||||||||||| |||  ||||||||||||||||||||| || ||||||||||| |||||||||    
T  21918 gagatgtttccgatgtggtaagaagggtcatgcactagctgattgcaaccataatgatattgtgtgcttcaattgcaatgaagagggtcacattggttct 21819  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
     |||||||||||||||||| |||||||||||||    
T  21818 tagtgcaagcagcctaagaaggcgccgactact 21786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 37542 - 37210
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||| |||||||||||||| ||||||||||||| | |||||| | ||||||||||||||| | ||||  |||||||||||||||||||||||    
T  37542 gctcattacaagattgtgaatgagcggaagactaagggccagctgagtcgtcttaagccctatagtgcccctgcttttaagggcaaacagaggatggtcg 37443  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || |||||||| | ||| ||||||| |||||||||||||  || ||| |||||||| |||||||||||||| | ||||| ||||| |   ||  ||||    
T  37442 atgatagacggccaaggaagaaggatgctcctgctgagattgtctgttttaattgtggtgagaaaggccacaagatcaatgcttgtcctcgagagataaa 37343  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    || ||||||||| ||||| |||||||| ||   | ||||||||||||| |||  ||||||||||||||||||||| || ||||||||||| |||||||||    
T  37342 gagatgtttccgatgtggtaagaagggtcatgcactagctgattgcaaccataatgatattgtgtgcttcaattgcaatgaagagggtcacattggttct 37243  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
     |||||||||||||||||| |||||||||||||    
T  37242 tagtgcaagcagcctaagaaggcgccgactact 37210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 145; Significance: 3e-76; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 30364 - 30696
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||| |||||||||||||| ||||||| ||||| ||||||||||||| |||||||||| | | |||||||||||| ||||||||||||||||    
T  30364 gctcattacaagattgtgaatgagcggaagactaaaggccagcagagtcgccctaggccctatagtacccctgctgataagggaaaacagaggatggtcg 30463  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    |||| | |||||| | ||| ||||||| |||||||||||||  || ||| |||||||| |||||||||||||| ||||||| |||||  |  || |||||    
T  30464 aggataaacggccaaggaagaaggatgctcctgctgagattgtctgttttaattgtggtgagaaaggccacaagagcaatgcttgtccaggagaggtaaa 30563  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    || ||||||||| ||||| |||||||| ||   | ||||||||||||| |||  |||  |||||||||||||||| || ||||||||| | |||||||||    
T  30564 gagatgtttccgatgtggtaagaagggtcatgcactagctgattgcaaacataatgaccttgtgtgcttcaattgcaatgaagagggttacattggttct 30663  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    |||||||||||  |||||| |||||||||||||    
T  30664 cagtgcaagcaatctaagaaggcgccgactact 30696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 17 - 346
Target Start/End: Original strand, 43243 - 43572
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||| |||||| |||||||||||||| | || || ||  | ||||||||||||||||| |||||||||| |||||||||||| |||||||| || || |    
T  43243 gctcaatacaagattgtgaatgagcggaaaaccaaaggtaagcagagtcgccctaagccttatagtgctcctgctgataagggtaaacagagaatagttg 43342  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || ||||| ||||| || |||| || |||||| |||  ||  |  | |||||| |||||||||||||| || |||| ||||| ||  || || ||    
T  43343 atgataggcggcccaagaagaaagatggtcttgctgaaattgtctgctatacttgtggtgagaaaggccacaagagtaatgcttgtcctggagatgtgaa 43442  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    |   ||||| |  ||||| ||||| || ||   | ||||||| ||||| |||| ||||||||||||||| ||||| || ||  | ||||| ||||||||     
T  43443 gtggtgttttcattgtggtaagaaaggtcatgcactagctgagtgcaaacatgatgatattgtgtgctttaattgcaatgagaaaggtcacattggttca 43542  T
Q  317 cagtgcaagcagcctaagagggcgccgact 346  Q
    ||||||||| | |||| || ||||| ||||    
T  43543 cagtgcaagaatcctatgaaggcgcagact 43572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 271
Target Start/End: Original strand, 164344 - 164445
Alignment:
Q  170 tgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatg 269  Q
    |||||||||||||||||||| || |||||||||  | |||| |  ||||| |||||| |||||||  |||| || ||||  |||| ||||||||||| ||    
T  164344 tgtggcgagaaaggccacaagagtaatgtttgttctaaggatgagaagaagtgtttcaggtgtggtcagaaaggacacactttagttgattgcaagcgtg 164443  T
Q  270 gt 271  Q
    ||    
T  164444 gt 164445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 144; Significance: 1e-75; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 17 - 348
Target Start/End: Complemental strand, 171632 - 171301
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||| || | ||||||||||||||||||||| |||||||    
T  171632 gctcattacaaggttgtgaatgagcggaagaccaagggccagcagagtcgccctaagccctatagcgcccctgctgataagggcaaacagagaatggtcg 171533  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
      || || ||||| ||||| ||||||| ||| | ||||||||| | || ||||||||| |||||||||||||| || |||||||||| ||  ||  | ||    
T  171532 ttgataggcggccaaagaagaaggatgctccagttgagattacttgttacaattgtggtgagaaaggccacaagagtaatgtttgtcctgtagagatcaa 171433  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||||||| | |||||||||||||| || || ||  ||||||||||||||| |  |||||||| ||||||||| ||||| |||||||||||||| |||||     
T  171432 gaaatgtgttcggtgtggcaagaaaggtcatattgtagctgattgcaagcgtaatgatattgcgtgcttcaactgtaatgaagagggtcatatcggttcc 171333  T
Q  317 cagtgcaagcagcctaagagggcgccgactac 348  Q
    || |||| |||||| ||||||||||| |||||    
T  171332 caatgcacgcagccgaagagggcgcctactac 171301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 144; Significance: 1e-75; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 17 - 348
Target Start/End: Complemental strand, 363 - 33
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||| |||||||||||||| |||| |||||||| |||||||| | |||||| |||||||| | ||||||||||||||||||||| |||||||    
T  363 gctcattacaagattgtgaatgagcggaagaccaagggccagcagagtcgtc-taagccttatagtgcccctgctgataagggcaaacagagaatggtcg 265  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || || |||||||| | ||||| ||| | ||||||||| |  ||||||||||| |||||||||||||| || |||||||||| ||  ||  | ||    
T  264 atgataggcgccctaagaagagggatgctccagttgagattacttgcttcaattgtggtgagaaaggccacaagagtaatgtttgtcctgtagagatcaa 165  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||||||| |||||||||| |||||||| ||  |  |||||||||||||||    |||||||||||||||||||||||| ||||||||||||||||||||     
T  164 gaaatgtgtccggtgtggtaagaagggtcatgttgtagctgattgcaagcgaaatgatattgtgtgcttcaattgtaatgaagagggtcatattggttcc 65  T
Q  317 cagtgcaagcagcctaagagggcgccgactac 348  Q
    || ||||||||||||||||||||||| |||||    
T  64 caatgcaagcagcctaagagggcgcctactac 33  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 17 - 243
Target Start/End: Original strand, 139400 - 139626
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||| |||||||| | ||||||||||||||||||||| |||||||    
T  139400 gctcattacaaggttgtgaatgagcggaagaccaagggccagcagagtcgccctaagccttatagtgcccctgctgataagggcaaacagagaatggtcg 139499  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || ||||||||||| | ||||  ||| ||||||||||| |  ||||||||||| |||||||||||||| || |||||||||| ||  ||  | ||    
T  139500 atgataggcggcctaagaagagggatactccagctgagattacttgcttcaattgtggtgagaaaggccacaagagtaatgtttgtcctgtagagatcaa 139599  T
Q  217 gaaatgtttccggtgtggcaagaaggg 243  Q
    ||||||| |||||||||||||||||||    
T  139600 gaaatgtgtccggtgtggcaagaaggg 139626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 141; Significance: 7e-74; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 36610 - 36942
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||| |||||||| ||||| ||| ||||||||| |||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||    
T  36610 gctcattacaagattgtgaattagcggaagagtaagggccagcagagtcgccctaagccctatagtgcccctgctgataagggcaaacaaaggatggtcg 36709  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    |||| |||||||| | ||| ||||||| |||||||||||||  || ||| |||||||||||||||||||| || ||||||| ||||| |   ||  || |    
T  36710 aggatagacggccaaggaagaaggatgctcctgctgagattgtctgttttaattgtggcgagaaaggccataagagcaatgcttgtcctagagagataca 36809  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    || ||||||||| ||||| |||||||| ||   | | || |||||||| | |  ||| ||||||||||||||||| || ||||||||||| |||||||||    
T  36810 gagatgtttccgatgtggtaagaagggtcatgcactggccgattgcaaccgtaatgacattgtgtgcttcaattgcaatgaagagggtcacattggttct 36909  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
     |||||||||| ||||||| |||||||||||||    
T  36910 tagtgcaagcaacctaagaaggcgccgactact 36942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 16 - 348
Target Start/End: Original strand, 7568 - 7900
Alignment:
Q  16 agctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtc 115  Q
    |||||||||||||||||||||||||||| |||| |||||||| |||||||||||||| || |||||||| | ||||||||| |||||| |||| ||||||    
T  7568 agctcattacaaggttgtgaatgagcggaagaccaagggccagcagagtcgccctaaaccttatagtgcccctgctgataaaggcaaatagagaatggtc 7667  T
Q  116 gaggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaa 215  Q
    || || || ||||| |||||||||| |  |||||| || |||   | |||||| ||||||| |||||||||||| || |||||||||| ||| ||  | |    
T  7668 gacgataggcggccaaagaataaggctactcctgcggatattgtttgtttcaactgtggcgggaaaggccacaagagtaatgtttgtcctgaagagatca 7767  T
Q  216 agaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttc 315  Q
    |||||||| ||||||||||||||||||| || ||  |||||||||||||   |  |||||||||||||||||| ||||| ||||||||||| ||||||||    
T  7768 agaaatgtgtccggtgtggcaagaagggtcatattatagctgattgcaaaagtaatgatattgtgtgcttcaactgtaatgaagagggtcacattggttc 7867  T
Q  316 tcagtgcaagcagcctaagagggcgccgactac 348  Q
     || ||||||||||| ||||||||||| |||||    
T  7868 ccaatgcaagcagccgaagagggcgcctactac 7900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 137; Significance: 2e-71; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 14598 - 14266
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||| ||||||||   ||||||||||||||||||||| ||||||     
T  14598 gctcattacaagattgtgaatgagcggaagactaagggtcaacagagtcgccctaagccttatagtgcctctgctgataagggcaaacagagaatggtca 14499  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || ||||||||||| ||||||| |||||| ||||||  || ||| | |||||||||||||||||| || || |||| |||||||| ||| || ||    
T  14498 atgataggcggcctaagaagaaggatgctcctgcagagattgtctgttttacttgtggcgagaaaggccataagagtaatgcttgtcttggggatgttaa 14399  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    || |||||| || ||||| |||||||| || | | ||||||| || ||||||| |||||| || || || ||||| || ||||||||||| ||||||||     
T  14398 gagatgttttcgctgtggaaagaagggtcatacactagctgagtgtaagcatgttgatatagtatgttttaattgcaatgaagagggtcacattggttca 14299  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||||||| ||||||||| ||||||| |||||    
T  14298 cagtgcaagaagcctaagaaggcgccggctact 14266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 11777 - 11446
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||||| |||| |||||||||||||| |  ||||||| || ||||||||||||||||| || ||||||| | ||||||||||||||||||| |||||||    
T  11777 gctcatttcaagattgtgaatgagcggaaagctaagggtcagcagagtcgccctaagccttacagtgctcctactgataagggcaaacagagaatggtcg 11678  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || ||||||||||| ||||||| || ||| ||||||  || ||| | |||||| |||||||||||||| || |||| |||||||| ||| || ||    
T  11677 aagataggcggcctaagaagaaggatgctcatgcagagattgtctgttttacttgtggtgagaaaggccacaagagtaatgcttgtcttggggatgtcaa 11578  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    || |||||| || ||||| |||||||| ||   | ||||||| ||||| |||| |||||| || || || ||||| || |||||||| || ||||||||     
T  11577 gagatgttttcgctgtggaaagaagggtcatgcactagctgagtgcaaacatgatgatatagtatgttttaattgcaatgaagaggg-cacattggttcc 11479  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||||||| ||||||||| || |||| |||||    
T  11478 cagtgcaagaagcctaagaaggtgccggctact 11446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1220 (Bit Score: 135; Significance: 3e-70; HSPs: 1)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 8 - 266
Target Start/End: Complemental strand, 259 - 1
Alignment:
Q  8 gacatcaaagctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacaga 107  Q
    |||| |||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||| |||    
T  259 gacaccaaagctcatcacaaggttgtgaatgagcggaagactaagggccagcagagtcgccctaagccctatagtgcccctgctgataagggcaaataga 160  T
Q  108 ggatggtcgaggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttga 207  Q
    | || ||||| || || ||||||||||| ||||||| || ||| ||||||  || ||||| |||||| |||||||||||||| |||||||||||||   |    
T  159 gtattgtcgatgataggcggcctaagaagaaggatgctcttgcggagattgtctgtttcatttgtggtgagaaaggccacaaaagcaatgtttgtccaaa 60  T
Q  208 ggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagc 266  Q
    ||| || ||||||||||||||||||||||||||||| || |  ||||||||||||||||    
T  59 ggaggtgaagaaatgtttccggtgtggcaagaagggtcatactttagctgattgcaagc 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 128; Significance: 4e-66; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 17 - 248
Target Start/End: Complemental strand, 8728 - 8497
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  8728 gctcattacaagattgtgaatgagcggaagactaagggccaacagagtcgccctaagccctatagtgcccctgctgataagggcaaacagaggatggtcg 8629  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    |||| |||||||| ||||| ||||| | || ||||||||||| || ||| ||||||||||||||||||||||| ||||||| ||||| |   ||  ||||    
T  8628 aggatagacggccaaagaagaaggacgctcttgctgagattatctgttttaattgtggcgagaaaggccacaagagcaatgcttgtcctagtgagataaa 8529  T
Q  217 gaaatgtttccggtgtggcaagaagggccaca 248  Q
    || ||||||| | ||||| ||||| |||||||    
T  8528 gagatgtttcagatgtggtaagaaaggccaca 8497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 323
Target Start/End: Complemental strand, 115923 - 115770
Alignment:
Q  170 tgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatg 269  Q
    |||||||||||||||||||| || |||||||||    | || |  ||||| || ||| |||||||  ||||||| ||| | |||||||||||||||| ||    
T  115923 tgtggcgagaaaggccacaaaagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggacagaagggtcacgtgttagctgattgcaagcgtg 115824  T
Q  270 gtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgca 323  Q
    ||||||| || ||||  ||||| || |  |||||||||||  ||||||||||||    
T  115823 gtgatatagtatgctataattgcaatggggagggtcatatcagttctcagtgca 115770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 50 - 135
Target Start/End: Original strand, 107600 - 107685
Alignment:
Q  50 aagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcgaggaaagacggcctaagaa 135  Q
    ||||| ||||||||||| |||||||| || ||||| |  |||||||| || ||||||| ||||||||| || || |||||||||||    
T  107600 aagggacaacagagtcgtcctaagccgtacagtgcccccgctgataaagggaaacagaagatggtcgatgataggcggcctaagaa 107685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 50135 - 50467
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||| | |||||||||||| || ||| |||| | ||||||| ||||||||| ||||| || | ||||||||||||||||||||| |||||||    
T  50135 gctcattacaagatcgtgaatgagcggaaggctatgggctagcagagtctccctaagccttatagcgcccctgctgataagggcaaacagagaatggtcg 50234  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || ||||||||||| |||||||||||||||||||||  ||  || |||||||| |||||||||||||| ||||||| |||||  |  || | |||    
T  50235 atgataggcggcctaagaagaaggatgttcctgctgagattgtctgctttaattgtggtgagaaaggccacaaaagcaatgcttgtccgggagagggaaa 50334  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    || |||||| || ||||| |||||||| |||| | ||||||| || |||| |  ||| |||||||||||||||||||| ||||||||||||||||||||     
T  50335 gagatgttttcgctgtgggaagaagggacacacactagctgagtgtaagcgtaatgacattgtgtgcttcaattgtaatgaagagggtcatattggttca 50434  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    || || | | ||||||| | |||||||||||||    
T  50435 caatgtacgaagcctaaaaaggcgccgactact 50467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 11 - 347
Target Start/End: Complemental strand, 399 - 63
Alignment:
Q  11 atcaaagctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagagga 110  Q
    |||||||||||||||||| |||| ||||||  | |||| ||| |||| |||||||||||||| || |||||||| | ||| ||||||||||| ||||| |    
T  399 atcaaagctcattacaagattgttaatgagaagaagaccaagagccagcagagtcgccctaaaccttatagtgcccctgcagataagggcaagcagagaa 300  T
Q  111 tggtcgaggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgagga 210  Q
    ||||||| || ||   ||| ||||| ||||||| |||||| || |||   | |||||| ||||||| |||||||||||| || |||||||||| ||| ||    
T  299 tggtcgatgataggaagccaaagaagaaggatgctcctgcggatattgtttgtttcaactgtggcgggaaaggccacaagagtaatgtttgtcctgaaga 200  T
Q  211 agtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatatt 310  Q
      | ||||||||| || ||||||| |||||||| || ||  ||||||||||||||| |  |||||||||||||||||| ||||| ||||||||||| |||    
T  199 gatcaagaaatgtgtctggtgtggtaagaagggtcatattgtagctgattgcaagcgtaatgatattgtgtgcttcaactgtaatgaagagggtcacatt 100  T
Q  311 ggttctcagtgcaagcagcctaagagggcgccgacta 347  Q
    ||||| || |||| |||||||||||||||||| ||||    
T  99 ggttcgcaatgcacgcagcctaagagggcgcctacta 63  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 117; Significance: 1e-59; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 11 - 347
Target Start/End: Original strand, 12908 - 13244
Alignment:
Q  11 atcaaagctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagagga 110  Q
    |||||||||||||||||| |||| ||||||  | |||| ||| |||| |||||||||||||| || |||||||| | ||| ||||||||||| ||||| |    
T  12908 atcaaagctcattacaagattgttaatgagaagaagaccaagagccagcagagtcgccctaaaccttatagtgcccctgcagataagggcaagcagagaa 13007  T
Q  111 tggtcgaggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgagga 210  Q
    ||||||| || ||   ||| ||||| ||||||| |||||| || |||   | |||||| ||||||| |||||||||||| || |||||||||| ||| ||    
T  13008 tggtcgatgataggaagccaaagaagaaggatgctcctgcggatattgtttgtttcaactgtggcgggaaaggccacaagagtaatgtttgtcctgaaga 13107  T
Q  211 agtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatatt 310  Q
      | ||||||||| || ||||||| |||||||| || ||  ||||||||||||||| |  |||||||||||||||||| ||||| ||||||||||| |||    
T  13108 gatcaagaaatgtgtctggtgtggtaagaagggtcatattgtagctgattgcaagcgtaatgatattgtgtgcttcaactgtaatgaagagggtcacatt 13207  T
Q  311 ggttctcagtgcaagcagcctaagagggcgccgacta 347  Q
    ||||| || |||| |||||||||||||||||| ||||    
T  13208 ggttcgcaatgcacgcagcctaagagggcgcctacta 13244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 59 - 349
Target Start/End: Complemental strand, 41624 - 41337
Alignment:
Q  59 cagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcgaggaaagacggcctaagaataaggatgttcctgctgagatta 158  Q
    |||||| | |||||||| || | ||| | |||| |||| || |||||||| |||||||| || || ||||||||||| |||||||   || ||||||||     
T  41624 cagagttgtcctaagccgtacattgcccctgctaataaagggaaacagagaatggtcgatgataggcggcctaagaagaaggatg---ctactgagattg 41528  T
Q  159 cctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctga 258  Q
      | |||||||||||| | |||||||||||| ||||||||||||| ||| ||    ||||| ||| || |||||||||||||||| || ||  |||||||    
T  41527 tgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaagagagcaagaagtgtgtctggtgtggcaagaagggtcatattgtagctga 41428  T
Q  259 ttgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
    |||||||| |   || |||||||| || || || || | ||||||||| ||| |||| ||||| |  ||||||||||||||||||||||||    
T  41427 ttgcaagcgtacggacattgtgtgttttaactgcaatggagagggtcacattagttcacagtgtactcagcctaagagggcgccgactact 41337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 113; Significance: 4e-57; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 21 - 349
Target Start/End: Original strand, 17143 - 17471
Alignment:
Q  21 attacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcgagga 120  Q
    |||||||| |||||||||||||| |  ||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||| ||    
T  17143 attacaagattgtgaatgagcggaaagctaagggtcaacagagtcgccctaagccttatagtgcccctgctgataagggcaaacagaggatggtcgaaga 17242  T
Q  121 aagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaa 220  Q
     ||||| |||||||| ||||||| |||| | ||||||   | |||   |||||| ||||| |||||||| || |||| ||||| || |||    |||| |    
T  17243 tagacgacctaagaagaaggatgctcctacagagattgtttgtttttcttgtggtgagaagggccacaagagtaatgcttgtcctggggataccaagaga 17342  T
Q  221 tgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagt 320  Q
    |||||||| ||||| |||||||| ||   | ||||||| ||||| |||| ||||||||| ||||| || || || ||||||||||| |||||||| ||||    
T  17343 tgtttccgatgtgggaagaagggtcatgcactagctgagtgcaaacatgatgatattgtatgctttaactgcaatgaagagggtcacattggttcacagt 17442  T
Q  321 gcaagcagcctaagagggcgccgactact 349  Q
    ||||| ||||||||  |||||||||||||    
T  17443 gcaagaagcctaagcaggcgccgactact 17471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 18 - 349
Target Start/End: Complemental strand, 404 - 73
Alignment:
Q  18 ctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcga 117  Q
    ||||||||||| |||||||||||||| |  ||||||| || ||||||| ||||||||| || ||||| | |||||||||||| |||||||||||||||||    
T  404 ctcattacaagattgtgaatgagcggaaagctaagggtcagcagagtctccctaagccttacagtgcccctgctgataagggaaaacagaggatggtcga 305  T
Q  118 ggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaag 217  Q
     || |||||||| ||||| ||||||| |||||| ||||||   | |||   |||||| ||||| |||||||| || |||| ||||| || ||| || |||    
T  304 agatagacggccaaagaagaaggatgctcctgcagagattgtttgtttttcttgtggtgagaagggccacaagagtaatgcttgtcctggggatgtcaag 205  T
Q  218 aaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctc 317  Q
    | |||||| || ||||| |||||||| ||   | ||||||| ||||| |||| |||||| || |||||||||||||| ||||| ||||| |||||||| |    
T  204 agatgttttcgctgtggaaagaagggtcatgcactagctgagtgcaaacatgatgatatagtatgcttcaattgtaatgaagatggtcacattggttccc 105  T
Q  318 agtgcaagcagcctaagagggcgccgactact 349  Q
    |||||||| ||||||||| | |||||||||||    
T  104 agtgcaagaagcctaagaagacgccgactact 73  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 19 - 243
Target Start/End: Complemental strand, 436 - 212
Alignment:
Q  19 tcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcgag 118  Q
    |||||||||| |||||||||||||| |||| | ||| ||| ||||||| |||||||| || ||||| | ||||||||||||||||||||| |||||||||    
T  436 tcattacaagattgtgaatgagcggaagaccaggggacaatagagtcgtcctaagccgtacagtgcccctgctgataagggcaaacagagaatggtcgag 337  T
Q  119 gaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaaga 218  Q
    || |||||||||||||| |||||||||||||||||||||  ||  || |||||||| |||||||||||||| ||||||| |||||| |  || |||||||    
T  336 gatagacggcctaagaagaaggatgttcctgctgagattgtctgctttaattgtggtgagaaaggccacaagagcaatgcttgtctgggagaggtaaaga 237  T
Q  219 aatgtttccggtgtggcaagaaggg 243  Q
     |||||| || ||||| ||||||||    
T  236 gatgttttcgctgtggtaagaaggg 212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 121966 - 122138
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||||||||||||||| |||||||||  ||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||    
T  121966 gctcattacaaggttgtaaatgagcggacgactaagggccaatagagtcgccctaagccctatagtgcccctgctgataagggcaaacagagaatggtcg 122065  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaa 189  Q
    | || || ||||||||||| ||||||| ||| ||||||||||| | |||||||||||| || |||||||||||    
T  122066 atgataggcggcctaagaagaaggatgctccagctgagattacttgtttcaattgtggtgaaaaaggccacaa 122138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1423 (Bit Score: 99; Significance: 8e-49; HSPs: 1)
Name: scaffold1423
Description:

Target: scaffold1423; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 17 - 335
Target Start/End: Original strand, 168 - 486
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||| | |||||||||||| |||||||||| ||  |||||||||||||||| || ||||| | |||||||||||||||||||||||||||||    
T  168 gctcattacaagatcgtgaatgagcggaagactaagggtcagaagagtcgccctaagccttacagtgcccctgctgataagggcaaacagaggatggtcg 267  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || |||||||||||||| ||||||| |||||| ||||||  || ||| | |||||| |||||||||||||| || |||| ||||| |  ||| |  ||    
T  268 aagatagacggcctaagaagaaggatgctcctgcagagattgtctgttttacttgtggtgagaaaggccacaagagtaatgcttgtccttgggatgccaa 367  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    || ||||||||| ||||| |||||||| ||   | ||||||| ||||| |||| |||||| || || || || || || |||||| |||| |||||| |     
T  368 gagatgtttccgctgtggaaagaagggtcatgcactagctgagtgcaaacatgatgatatagtatgttttaactgcaatgaagagcgtcacattggtgca 467  T
Q  317 cagtgcaagcagcctaaga 335  Q
     | |||||| |||||||||    
T  468 taatgcaagaagcctaaga 486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 99; Significance: 8e-49; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 19 - 349
Target Start/End: Original strand, 10672 - 11002
Alignment:
Q  19 tcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcgag 118  Q
    |||||||||| |||||||||||||| |  ||||||| ||| |||||||||||||||| || ||||| | ||||||||||||||||||||||||||||||     
T  10672 tcattacaagattgtgaatgagcggaaagctaagggtcaaaagagtcgccctaagccttacagtgcccctgctgataagggcaaacagaggatggtcgaa 10771  T
Q  119 gaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaaga 218  Q
    || |||||||||||||| ||||||| |||| | ||||||   | |||   |||||| ||||| |||||||| || |||| ||||| |  |||    || |    
T  10772 gacagacggcctaagaagaaggatgctcctacagagattgtttgtttttcttgtggtgagaagggccacaagagtaatgcttgtcctagggataccaaca 10871  T
Q  219 aatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctca 318  Q
     ||||||||| ||||| |||||||| ||   | ||||||| ||||| |||| ||||||||| ||||| || |  || ||||||||||| |||||||| ||    
T  10872 gatgtttccgatgtgggaagaagggtcatgcactagctgagtgcaaacatgatgatattgtatgctttaactacaatgaagagggtcacattggttcaca 10971  T
Q  319 gtgcaagcagcctaagagggcgccgactact 349  Q
    ||||||| ||||||||| ||||||| |||||    
T  10972 gtgcaagaagcctaagaaggcgccggctact 11002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 99; Significance: 8e-49; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 19 - 349
Target Start/End: Complemental strand, 30799 - 30469
Alignment:
Q  19 tcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcgag 118  Q
    |||||||||| |||||||||||||| |||| | ||| ||||||||||  |||||||| || ||||| | ||||||||| ||||||||||| |||||||||    
T  30799 tcattacaagattgtgaatgagcggaagaccaggggacaacagagtcatcctaagccgtacagtgcccctgctgataaaggcaaacagagaatggtcgag 30700  T
Q  119 gaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaaga 218  Q
    || || ||| ||||||| |||||||||||||||||||||  ||  || |||||||| ||||||| |||||| ||||||| |||||  |  || |||||||    
T  30699 gataggcggtctaagaagaaggatgttcctgctgagattgtctgctttaattgtggtgagaaagaccacaagagcaatgcttgtccgggagaggtaaaga 30600  T
Q  219 aatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctca 318  Q
     |||||| || ||||| |||||||| || | | ||||||| || ||||||   || |||||||| || || ||  | || || |||||||||||||| ||    
T  30599 gatgttttcgctgtggtaagaagggtcatacactagctgagtgtaagcataaggacattgtgtgttttaactgcgaagaggaaggtcatattggttcaca 30500  T
Q  319 gtgcaagcagcctaagagggcgccgactact 349  Q
    ||| | | ||||||||| |||||||||||||    
T  30499 gtgtacggagcctaagaaggcgccgactact 30469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 96; Significance: 5e-47; HSPs: 2)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 18 - 349
Target Start/End: Complemental strand, 15424 - 15093
Alignment:
Q  18 ctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcga 117  Q
    ||||||||||| |||||||||||||| |  ||||||| |||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||    
T  15424 ctcattacaagattgtgaatgagcggaaagctaagggtcaacagagtcgccctaagccttatagtgcccctgctgataagggcaaacagaggatggtcga 15325  T
Q  118 ggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaag 217  Q
     || |||||||||||||| ||||||| |||| | ||||||   | |||   |||||| ||||| ||||||||  | |||| ||||| |  |||    ||     
T  15324 agatagacggcctaagaagaaggatgctcctacagagattgtttttttttcttgtggtgagaagggccacaagggtaatgcttgtcctagggataccaat 15225  T
Q  218 aaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctc 317  Q
    | ||||||||| ||||| ||||||||  |   | ||||||| ||||| |||| | ||||||| ||||| || || || ||||||||||| |||||||| |    
T  15224 agatgtttccgatgtgggaagaagggttatgcactagctgagtgcaaacatgataatattgtatgctttaactgcaatgaagagggtcacattggttcac 15125  T
Q  318 agtgcaagcagcctaagagggcgccgactact 349  Q
    |||||||| ||||||||| |||| || |||||    
T  15124 agtgcaagaagcctaagaaggcgtcggctact 15093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 7 - 107
Target Start/End: Complemental strand, 101 - 1
Alignment:
Q  7 ggacatcaaagctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacag 106  Q
    |||||||| |||||||||||||||||| ||||||||| ||||||||||||| ||||||| |||||||||||||||||| | |||||||||||||||||||    
T  101 ggacatcagagctcattacaaggttgttaatgagcggaagactaagggccagcagagtcaccctaagccctatagtgcccctgctgataagggcaaacag 2  T
Q  107 a 107  Q
    |    
T  1 a 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 18 - 349
Target Start/End: Complemental strand, 8924 - 8592
Alignment:
Q  18 ctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcga 117  Q
    ||||||||||| |||||||||||||| |  ||||||| |||||||||||||||||||| || ||||| | |||||||||||| |||||||||||||||||    
T  8924 ctcattacaagattgtgaatgagcggaaagctaagggtcaacagagtcgccctaagccttacagtgcccctgctgataagggaaaacagaggatggtcga 8825  T
Q  118 ggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaag 217  Q
     || ||||| |||||||| ||||||  |||| ||||||||   | |||   |||||| ||||| |||||||| || |||| ||||| |  |||    |||    
T  8824 agatagacgacctaagaagaaggatactcctactgagattgtttgtttttcttgtggtgagaagggccacaagagtaatgcttgtcctagggataccaag 8725  T
Q  218 aaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctc 317  Q
    | |||||| || ||||| |||||||| ||     ||||||| ||||| |||| ||||||||| ||||| || || || ||||||||||| |||||||| |    
T  8724 agatgttttcgctgtggaaagaagggtcatgctctagctgagtgcaaacatgatgatattgtatgctttaactgcaatgaagagggtcacattggttcac 8625  T
Q  318 agtgcaag-cagcctaagagggcgccgactact 349  Q
    ||||||||  ||||||||| |||||||||||||    
T  8624 agtgcaagaaagcctaagaaggcgccgactact 8592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 8737 - 8405
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||| |||||||||||||| |  ||||||| || ||||||||||||||||| || ||||||||||| ||||||||||||||||| |||||||    
T  8737 gctcattacaagattgtgaatgagcggaaagctaagggtcagcagagtcgccctaagccttacagtgctcttgccgataagggcaaacagagaatggtcg 8638  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    |  | || ||||||||||| ||||||| ||||||  |||||  ||  || | ||||||  ||||||||||||| || |||| ||||| |  ||| || ||    
T  8637 ataataggcggcctaagaagaaggatgctcctgcaaagattgtctgctttacttgtggtcagaaaggccacaagagtaatgcttgtcctagggatgttaa 8538  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||  ||||| || ||||| |||||||| ||   | ||||||| ||||| |||| |||||| || ||||| |||||  | ||||| ||||| ||||||||     
T  8537 gaggtgttttcgctgtggaaagaagggtcatgcactagctgagtgcaaacatgatgatatagtatgctttaattgcgatgaagaaggtcacattggttca 8438  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| ||| ||||||||| ||||||| |||||    
T  8437 cagtggaagaagcctaagaaggcgccggctact 8405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0993 (Bit Score: 89; Significance: 7e-43; HSPs: 1)
Name: scaffold0993
Description:

Target: scaffold0993; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 1496 - 1164
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||| |||||||||| ||| |||| |||||||||||||||||||||||||| || ||||||| |||||||||||| |||||||| ||||| |    
T  1496 gctcattacaagattgtgaatgaacggaagaccaagggccaacagagtcgccctaagccttacagtgctcctgctgataagggtaaacagagaatggttg 1397  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || || || |  || | ||| | ||||| |||||||   | ||  | |||||| |||||||||||||| || |||| ||||| || ||| |||||    
T  1396 atgataggcgcccgagaaagatggaagctcctgttgagattgtttgttatacttgtggtgagaaaggccacaagagtaatgcttgtcctggggatgtaaa 1297  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    || |||||| |  ||||| ||||| || || | | ||||||| || ||||| | ||| ||||||||||| ||||| ||  | |||||||| ||||||||     
T  1296 gagatgttttccctgtggtaagaaaggtcatacactagctgagtgtaagcacgatgacattgtgtgctttaattgcaattaggagggtcacattggttca 1197  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| ||| ||||||||| |||||||||||||    
T  1196 cagtgtaagaagcctaagaaggcgccgactact 1164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 89; Significance: 7e-43; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 17 - 157
Target Start/End: Original strand, 66320 - 66460
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||| ||||| |    
T  66320 gctcattacaaggttgtgaatgagcggaagactaagggccagcagagtcgccctaagccctatagtgcccctgctgataagggcaaacagagaatggttg 66419  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagatt 157  Q
    |||| |||||||| | ||| ||||||| ||||  |||||||    
T  66420 aggatagacggccaaggaagaaggatgctcctattgagatt 66460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 171 - 349
Target Start/End: Original strand, 69366 - 69543
Alignment:
Q  171 gtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatgg 270  Q
    |||| |||||||||||||| ||||||| |||||  || || ||||| | |||||||| |||||| |||||||| ||   |||||||||||||||||||      
T  69366 gtggtgagaaaggccacaagagcaatgcttgtccggaagaggtaaaaagatgtttccagtgtggtaagaagggtcatgcattagctgattgcaagcataa 69465  T
Q  271 tgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
    | ||||||||||||||||||| || ||||||||||| |||||||||||||||||| ||||||||| || ||||||||||    
T  69466 t-atattgtgtgcttcaattgcaaagaagagggtcacattggttctcagtgcaagtagcctaagaaggtgccgactact 69543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 84; Significance: 7e-40; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 18 - 349
Target Start/End: Complemental strand, 2502 - 2171
Alignment:
Q  18 ctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcga 117  Q
    ||||||||||| |||||||||||||  || | ||||| ||||||||||| |||||||| || ||||| |||||||||||||| ||| |||| ||||| ||    
T  2502 ctcattacaagattgtgaatgagcgaaaggccaagggtcaacagagtcgtcctaagccttacagtgcccttgctgataagggaaaatagagaatggttga 2403  T
Q  118 ggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaag 217  Q
     || ||||| |||||||| || ||||||||| ||||||||   |  |  | |||||| |||||||||||||| ||||||| ||||| || ||| || ||     
T  2402 tgatagacgccctaagaagaaagatgttcctactgagattgtgtgctatacttgtggtgagaaaggccacaagagcaatgcttgtcatggggatgttaat 2303  T
Q  218 aaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctc 317  Q
    |  ||||| || ||||| |||||||| ||   | ||||||| ||||| ||||  ||||||||||| || ||||| || || || ||||| |||||||| |    
T  2302 aggtgttttcgctgtggtaagaagggtcatgcactagctgagtgcaaacatgaggatattgtgtgttttaattgcaatgaggaaggtcacattggttcac 2203  T
Q  318 agtgcaagcagcctaagagggcgccgactact 349  Q
    |||||||| |||||||||  |||| |||||||    
T  2202 agtgcaagaagcctaagaatgcgcagactact 2171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0611 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0611
Description:

Target: scaffold0611; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 17 - 243
Target Start/End: Original strand, 9233 - 9459
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||| |||||||||||| | |||||||||| || |||||||||| |||||| |||||||| | ||||||||||||||||| ||| |||||||    
T  9233 gctcattacaagattgtgaatgagccgaagactaagggtcagcagagtcgccttaagccttatagtgcccctgctgataagggcaaaccgagaatggtcg 9332  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || |||||| |||| ||||||| |||||| ||||||  || ||| | |||||| |||||||||||||| || |||| ||||| || ||| || ||    
T  9333 aagataggcggccttagaagaaggatgctcctgcagagattgtctgttttacttgtggtgagaaaggccacaagagtaatgcttgtcctggggatgtcaa 9432  T
Q  217 gaaatgtttccggtgtggcaagaaggg 243  Q
    || |||||| ||  |||| ||||||||    
T  9433 gagatgttttcgtagtggaaagaaggg 9459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 349
Target Start/End: Complemental strand, 9460 - 9129
Alignment:
Q  18 ctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcga 117  Q
    |||||||| || ||||||| |||||| |  ||||||| |||||||||||| |||| || |||||||| | || |||||||||||||||||||||||||||    
T  9460 ctcattactagattgtgaaggagcggaaagctaagggtcaacagagtcgcgctaatccttatagtgcccctggtgataagggcaaacagaggatggtcga 9361  T
Q  118 ggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaag 217  Q
     || |||   |||||||| ||||||| ||||||  |||||   | |||   |||||| ||||| |||||||| || |||| ||||| || |||    |||    
T  9360 agatagataacctaagaagaaggatgctcctgcaaagattgtttgtttttcttgtggtgagaagggccacaagagtaatgcttgtcctggggataccaag 9261  T
Q  218 aaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctc 317  Q
    | ||||||||| ||||| |||||||| ||   | ||| ||| ||||| |||| |||||||||  |||| || || || ||||||||||| |||||||| |    
T  9260 agatgtttccgatgtgggaagaagggtcatgcactagttgagtgcaaacatgatgatattgtacgctttaactgcaatgaagagggtcacattggttcac 9161  T
Q  318 agtgcaagcagcctaagagggcgccgactact 349  Q
    |||| ||||||||||||| ||||||| |||||    
T  9160 agtgtaagcagcctaagaaggcgccggctact 9129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 17 - 149
Target Start/End: Complemental strand, 7014 - 6882
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||| |||||||||||||| |||||||||| || ||||||||||||||||| || ||||| | |||||||||| ||||||||||||||||||    
T  7014 gctcattacaagattgtgaatgagcggaagactaagggtcagcagagtcgccctaagccttacagtgcccctgctgataagtgcaaacagaggatggtcg 6915  T
Q  117 aggaaagacggcctaagaataaggatgttcctg 149  Q
    | || ||||| |||||||| ||||||| |||||    
T  6914 aagatagacgacctaagaagaaggatgctcctg 6882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 424822 - 424490
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||| | |||||||||||| ||   ||||| || || ||||| |||||||| || | ||| | ||||||||| || ||||| |  |||||||    
T  424822 gctcattacaagatggtgaatgagcggaagggcaagggacagcatagtcgtcctaagccgtacaatgcccctgctgataaagggaaacaaaatatggtcg 424723  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || ||||||| ||| |||| || |||| ||||||||   |  ||||| ||||| | |||||||||||| ||||||||||||| ||| ||  | ||    
T  424722 atgataggcggcctacgaagaagggtgctcctactgagattgtgtgcttcaactgtggtgtgaaaggccacaaaagcaatgtttgtcctgaagagattaa 424623  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||||||| |||| |||||||||||||| || ||  ||||||||||||||| ||  || |||||||| || || || || ||||||||||| ||  ||||     
T  424622 gaaatgtgtccgatgtggcaagaagggtcatattgtagctgattgcaagcgtgaggacattgtgtgttttaactgcaatgaagagggtcacatcagttca 424523  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  424522 cagtgtactcagcctaagagggcgccgactact 424490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 73; Significance: 3e-33; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 34561 - 34673
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||| ||||| || | ||||||||||||||||||||| |||||||    
T  34561 gctcattacaaggtcgtgaatgagcggaagactaagggccagcagagtcgccctaagccttatagcgcccctgctgataagggcaaacagagaatggtcg 34660  T
Q  117 aggaaagacggcc 129  Q
    | || ||||||||    
T  34661 aagatagacggcc 34673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 182 - 349
Target Start/End: Original strand, 34670 - 34837
Alignment:
Q  182 ggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgt 281  Q
    |||||||| ||||||| || ||| |  || ||||||| ||||||||| ||||| |||||||||||   | ||||||| ||||| |||  |||||||||||    
T  34670 ggccacaagagcaatgcttctctgggagaggtaaagagatgtttccgatgtggtaagaagggccatgcactagctgagtgcaaacataatgatattgtgt 34769  T
Q  282 gcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||||| ||||| ||||||||||| |||||||| ||||| |||| |||||||| |||||||||||||    
T  34770 gcttcaactgtaatgaagagggtcacattggttcgcagtgtaagctgcctaagaaggcgccgactact 34837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 42146 - 41814
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||| |||||||||||||  |    || || || |||||||| |||||||| || ||||||  |||||||||||| |||||||| ||||| |    
T  42146 gctcattacaagattgtgaatgagcgaaaagtcaaaggtcagcagagtcgtcctaagccttacagtgcttctgctgataagggtaaacagagaatggttg 42047  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || || ||||  || || ||||  |||| |||||||  |||    | |||||| |||||||| ||||| || |||| ||||| || ||| || ||    
T  42046 atgagaggcgccctagaaagaaagatgcccctgttgagattttctacaatacttgtggtgagaaaggtcacaagagtaatgcttgtcctggggacgtgaa 41947  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
     | ||| || || ||||| ||||| || ||   | | ||||| || || |||| ||||||||||||||| ||||| || || || ||||| ||||||||     
T  41946 aagatgctttcgttgtgggaagaaaggtcatgcacttgctgagtgtaaacatgatgatattgtgtgctttaattgcaatgaggaaggtcacattggttcg 41847  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||||||| ||||||||| ||||| |||||||    
T  41846 cagtgcaagaagcctaagaaggcgcagactact 41814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 75866 - 75534
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||| |||||||||||||  |    || || || |||||||| |||||||| || ||||||  |||||||||||| |||||||| ||||| |    
T  75866 gctcattacaagattgtgaatgagcgaaaagtcaaaggtcagcagagtcgtcctaagccttacagtgcttctgctgataagggtaaacagagaatggttg 75767  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || || ||||  || || ||||  |||| |||||||  |||    | |||||| |||||||| ||||| || |||| ||||| || ||| || ||    
T  75766 atgagaggcgccctagaaagaaagatgcccctgttgagattttctacaatacttgtggtgagaaaggtcacaagagtaatgcttgtcctggggacgtgaa 75667  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
     | ||| || || ||||| ||||| || ||   | | ||||| || || |||| ||||||||||||||| ||||| || || || ||||| ||||||||     
T  75666 aagatgctttcgttgtgggaagaaaggtcatgcacttgctgagtgtaaacatgatgatattgtgtgctttaattgcaatgaggaaggtcacattggttcg 75567  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||||||| ||||||||| ||||| |||||||    
T  75566 cagtgcaagaagcctaagaaggcgcagactact 75534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 72; Significance: 1e-32; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 56 - 349
Target Start/End: Complemental strand, 55476 - 55186
Alignment:
Q  56 caacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcgaggaaagacggcctaagaataaggatgttcctgctgaga 155  Q
    ||||||||||| |||||||| || ||||| | ||||||||| || |||||||| |||||||| || || ||||||||||| ||||||||| |||   | |    
T  55476 caacagagtcgtcctaagccgtacagtgcccctgctgataaagggaaacagagaatggtcgatgataggcggcctaagaagaaggatgtttctg---aaa 55380  T
Q  156 ttacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagc 255  Q
    ||   |  ||||| ||||| |  ||||||||||| ||||||| ||||| ||| ||| | ||||| ||| ||||||||||||||||||| || ||| || |    
T  55379 ttgtgtgcttcaactgtggtggaaaaggccacaagagcaatggttgtcctgaagaaattaagaagtgtgtccggtgtggcaagaagggtcatatagtatc 55280  T
Q  256 tgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||||||||| |   || ||||| || || || || || |||||||| |||||| |||||||||| |  ||||||||||||||||| ||||||    
T  55279 tgattgcaagcgtcaggacattgtatgttttaactgcaatgaagagggacatattagttctcagtgtactcagcctaagagggcgccaactact 55186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 109 - 349
Target Start/End: Complemental strand, 21416 - 21179
Alignment:
Q  109 gatggtcgaggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgag 208  Q
    ||||||||| || || ||||||||||| |||||||   || ||||||||   | |||||||||||| | |||||||||||| ||||| || || | ||||    
T  21416 gatggtcgatgataggcggcctaagaagaaggatg---ctactgagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaacgtctgccctgag 21320  T
Q  209 gaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcata 308  Q
    ||| | ||||| ||| |||||||||||||||| || || ||  ||||||| ||||||| |   || |||||||| || || || || | ||||||||| |    
T  21319 gaaatcaagaagtgtgtccggtgtggcaagaaaggtcatattgtagctgaatgcaagcgtacggacattgtgtgttttaactgcaatggagagggtcaca 21220  T
Q  309 ttggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
    || |||| ||||| |  |||||||||||| |||||||||||    
T  21219 ttagttcacagtgtactcagcctaagaggacgccgactact 21179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 109 - 349
Target Start/End: Complemental strand, 11888 - 11651
Alignment:
Q  109 gatggtcgaggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgag 208  Q
    ||||||||| || || ||||||||||| |||||||   || ||||||||   | |||||||||||| | |||||||||||| ||||| || || | ||||    
T  11888 gatggtcgatgataggcggcctaagaagaaggatg---ctactgagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaacgtctgccctgag 11792  T
Q  209 gaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcata 308  Q
    ||| | ||||| ||| |||||||| ||||||| || || ||  ||||||| ||||||| |   || |||||||| || || || || | ||||||||| |    
T  11791 gaaatcaagaagtgtgtccggtgtcgcaagaaaggtcatattgtagctgaatgcaagcgtacggacattgtgtgttttaactgcaatggagagggtcaca 11692  T
Q  309 ttggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
    || |||| ||||| |  ||||||||||||| ||||||||||    
T  11691 ttagttcacagtgtactcagcctaagagggtgccgactact 11651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 50 - 349
Target Start/End: Complemental strand, 10846 - 10550
Alignment:
Q  50 aagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcgaggaaagacggcctaagaataaggatgttcctg 149  Q
    ||||| || |||||||| |||||||| || ||||| | ||||||||| || ||||||| ||||||||| || || ||||||||||| |||||||   ||     
T  10846 aagggacagcagagtcgtcctaagccgtacagtgcccctgctgataaagggaaacagaagatggtcgatgataggcggcctaagaagaaggatg---cta 10750  T
Q  150 ctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacat 249  Q
    ||||||||   | |||||||||||| | |||||||||||| |||||||| || | ||||||| | ||||| ||| |||||||||||||||| || || ||    
T  10749 ctgagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtctgccctgaggaaatcaagaagtgtgtccggtgtggcaagaaaggtcatat 10650  T
Q  250 attagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
      ||||||| ||||||| |   || ||| |||| || || || || | | ||||||| ||| |||| ||||| |  ||||||||||||||||||||||||    
T  10649 tgtagctgaatgcaagcgtacggacattatgtgttttaactgcaatggaaagggtcacattagttcacagtgtactcagcctaagagggcgccgactact 10550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 18 - 335
Target Start/End: Original strand, 40298 - 40615
Alignment:
Q  18 ctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcga 117  Q
    ||||||||||| |||||||||||||  || | ||||| ||||||||||| |||||||| || ||||| | |||||||||||| ||||||||  |||| ||    
T  40298 ctcattacaagattgtgaatgagcgaaaggccaagggtcaacagagtcgtcctaagccttacagtgcccctgctgataagggaaaacagagagtggttga 40397  T
Q  118 ggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaag 217  Q
     || || || || |  || || |||| |||||||||||||   |  |  | |||||| |||||||||||||| ||||||| ||||| || ||| || |||    
T  40398 tgataggcgcccgagaaagaaagatgctcctgctgagattgaattctatacttgtggtgagaaaggccacaagagcaatgcttgtcctggggatgttaag 40497  T
Q  218 aaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctc 317  Q
    | ||||||  | ||||| |||||||| ||   | ||||||| ||||| |||| |||||| || || || ||||| || ||||||||||| |||||||| |    
T  40498 agatgtttttgctgtggaaagaagggtcatgcactagctgagtgcaaacatgatgatatagtatgttttaattgcaatgaagagggtcacattggttcac 40597  T
Q  318 agtgcaagcagcctaaga 335  Q
    |||||||| |||||||||    
T  40598 agtgcaagaagcctaaga 40615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 21 - 321
Target Start/End: Original strand, 4349 - 4649
Alignment:
Q  21 attacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcgagga 120  Q
    |||||||| |||||||||||||| | || || || || |||||||| |||||||| || ||||||| |||||||||||  |||||||| ||||| || ||    
T  4349 attacaagattgtgaatgagcggaaaaccaaaggtcagcagagtcgtcctaagccttacagtgctcctgctgataaggataaacagagaatggttgatga 4448  T
Q  121 aagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaa 220  Q
     || ||||||||||| || |||| |||||  ||||||  ||  |  | |||||| || ||||||||||| || |||| ||||| || ||| || |||| |    
T  4449 taggcggcctaagaagaaagatgctcctgtggagattgtctgctatacttgtggtgaaaaaggccacaagagtaatgcttgtcctggggatgtgaagaga 4548  T
Q  221 tgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagt 320  Q
    ||||| || ||||| |||||||| ||   | ||||||| ||||| |||| ||||||||||||||| ||||| || || || ||||| |||||||| ||||    
T  4549 tgttttcgttgtggtaagaagggtcatgcactagctgagtgcaaacatgatgatattgtgtgctttaattgcaatgaggaaggtcacattggttcgcagt 4648  T
Q  321 g 321  Q
    |    
T  4649 g 4649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0789 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0789
Description:

Target: scaffold0789; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 88 - 349
Target Start/End: Complemental strand, 378 - 120
Alignment:
Q  88 tgctgataagggcaaacagaggatggtcgaggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccac 187  Q
    ||||||| | || ||||||||||||||||| || || ||||||||||| |||||||   || |||| |||   | |||||||| ||| | ||||||||||    
T  378 tgctgatgaagggaaacagaggatggtcgatgataggcggcctaagaagaaggatg---ctactgaaattgtgtgtttcaattatggtgggaaaggccac 282  T
Q  188 aacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttca 287  Q
    || ||||||||||||| ||| ||  | ||||||||| ||||||||||||||||||| ||  |  ||||||||||||||| |   || |||||||| || |    
T  281 aaaagcaatgtttgtcctgaagagattaagaaatgtgtccggtgtggcaagaagggtcattttgtagctgattgcaagcgtacggacattgtgtgtttta 182  T
Q  288 attgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
    | || || | ||||||||| ||| |||| ||||| |  ||||||||||||||||||||||||    
T  181 actgcaatggagagggtcacattagttcacagtgtactcagcctaagagggcgccgactact 120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 18 - 349
Target Start/End: Complemental strand, 4064 - 3733
Alignment:
Q  18 ctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcga 117  Q
    ||||||||||| |||| |||||| || | || || || || |||||||| |||||| | || ||||||| |||||||||||| |||||||| ||||| ||    
T  4064 ctcattacaagattgtaaatgagaggaaaaccaaaggtcagcagagtcgtcctaagtcttacagtgctcctgctgataagggtaaacagagaatggttga 3965  T
Q  118 ggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaag 217  Q
     || || ||||||||||| || |||| ||||||||| |||  ||  |  | || ||| | ||||| |||||| || |||| ||||| || ||| || |||    
T  3964 tgataggcggcctaagaagaaagatgctcctgctgaaattgtctgctatacttatggtgtgaaagaccacaagagtaatgcttgtcctggggatgtgaag 3865  T
Q  218 aaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctc 317  Q
    |  ||||| || ||||| ||||| || ||   | ||||||| |||||  ||| ||||||||||||||| ||||| || || || ||||| |||||||| |    
T  3864 aggtgttttcgttgtggtaagaaaggtcatgcactagctgagtgcaaaaatgatgatattgtgtgctttaattgcaatgaggaaggtcacattggttcac 3765  T
Q  318 agtgcaagcagcctaagagggcgccgactact 349  Q
    |||||||| ||||||||| ||||| |||||||    
T  3764 agtgcaagaagcctaagaaggcgcagactact 3733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 50 - 349
Target Start/End: Complemental strand, 8736 - 8440
Alignment:
Q  50 aagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcgaggaaagacggcctaagaataaggatgttcctg 149  Q
    ||||| || |||||||| |||||||| || ||||| |   ||||||| || ||||||||||||||||| || || ||||||||||| |||||||   ||     
T  8736 aagggacatcagagtcgtcctaagccgtacagtgccccaactgataaagggaaacagaggatggtcgatgataggcggcctaagaagaaggatg---cta 8640  T
Q  150 ctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacat 249  Q
    | ||||||   | |||||||||||| | || ||||||||| |||||||| |||| ||| ||  | ||||| ||| ||| ||||||||||||||| || ||    
T  8639 ccgagattgtgtgtttcaattgtggtgggagaggccacaaaagcaatgtctgtcctgaagagatcaagaagtgtgtccagtgtggcaagaagggtcatat 8540  T
Q  250 attagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
      ||||||||||||||| |   || |||||||| || || |  || || ||||| |||||| |||| ||||| |  ||||||||||||||||||||||||    
T  8539 tgtagctgattgcaagcgtaaggacattgtgtgttttaactacaatgatgagggacatattagttcacagtgtactcagcctaagagggcgccgactact 8440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 23735 - 24067
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||| ||| |||||||||||| | |  |||| || || |||||||| |||||||| || ||||||| ||||||||||||||||||||| ||||| |    
T  23735 gctcattataagattgtgaatgagcagaaagctaaaggtcagcagagtcgtcctaagccatacagtgctcctgctgataagggcaaacagagaatggttg 23834  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || ||  |||||||||| || |||  || || |||||||  || ||  | |||||| |||||||||||||| || |||| ||||| || ||| |||||    
T  23835 atgataggtggcctaagaagaaagatactcatgttgagattgtctgttatacttgtggtgagaaaggccacaagagtaatgcttgtcctggggacgtaaa 23934  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
     | |||||| || ||||| ||||| |  ||   | ||||||| ||||| |||| |||||  |  ||||| ||||| || || || ||||| ||||||||     
T  23935 aagatgttttcgatgtggtaagaaagatcatgcactagctgagtgcaaacatgatgatacagaatgctttaattgcaatgaggaaggtcacattggttcg 24034  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    || |||||| ||||||||| ||||| |||||||    
T  24035 caatgcaagaagcctaagaaggcgcagactact 24067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 19911 - 19812
Alignment:
Q  18 ctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcga 117  Q
    ||||||||||| |||||||||||||| |  ||||||| || ||||||||||||||||| |||||||| | |||||||||||| |||||||||||||||||    
T  19911 ctcattacaagattgtgaatgagcggaaagctaagggtcagcagagtcgccctaagccttatagtgcccctgctgataagggaaaacagaggatggtcga 19812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 13007 - 12923
Alignment:
Q  251 ttagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaaga 335  Q
    ||||||||||| |||| ||| ||| |||| |||| ||| ||||| ||||| ||||||||  |||| ||||| | |||||||||||    
T  13007 ttagctgattgtaagcgtggggatgttgtttgctacaactgtaatgaagaaggtcatatcagttcgcagtgtacgcagcctaaga 12923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 88 - 349
Target Start/End: Original strand, 2124 - 2385
Alignment:
Q  88 tgctgataagggcaaacagaggatggtcgaggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccac 187  Q
    |||||||||||||||||||||||||||||| || |||||||| ||||| ||||||| |||||  ||||||   | |||   |||||| || || ||||||    
T  2124 tgctgataagggcaaacagaggatggtcgaagatagacggccgaagaagaaggatgctcctgtagagattgtttgtttttcttgtggtgacaagggccac 2223  T
Q  188 aacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttca 287  Q
    || || |||| ||||| || |||    |||| ||||||||| ||||| |||||||| ||   | ||||||| ||||| |||| ||||||||| ||||| |    
T  2224 aagagtaatgcttgtcctggggataccaagagatgtttccgatgtgggaagaagggtcatgcactagctgagtgcaaacatgatgatattgtatgcttta 2323  T
Q  288 attgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
    | |  || ||||||||||| ||||||||  |||| ||| ||||||||| || |||| |||||    
T  2324 actacaatgaagagggtcacattggttcatagtgtaagtagcctaagaaggtgccggctact 2385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 59 - 349
Target Start/End: Complemental strand, 22716 - 22429
Alignment:
Q  59 cagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcgaggaaagacggcctaagaataaggatgttcctgctgagatta 158  Q
    |||||||| |||||||| || ||||| |  ||||| || || ||||||| ||||||||| |  || ||||||||||| ||||||    |||| ||||||     
T  22716 cagagtcgtcctaagccgtacagtgcccccgctgacaaagggaaacagaagatggtcgatgttaggcggcctaagaagaaggata---ctgcagagattg 22620  T
Q  159 cctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctga 258  Q
      | |||||||||||| |||||||||||||| ||||| || || |  |||||| | ||||| ||| |||||||||| |||||||| ||  |  |||||||    
T  22619 tgtgtttcaattgtggtgagaaaggccacaagagcaacgtctgccccgaggaaatcaagaagtgtgtccggtgtggtaagaagggtcatgttgtagctga 22520  T
Q  259 ttgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
    |||||| | |   || ||||| ||||| ||||| || | ||||||||| ||| |||| ||||| |  ||||||||||||||||||||||||    
T  22519 ttgcaaccgtacagacattgtttgctttaattgcaatggagagggtcacattagttcacagtgtactcagcctaagagggcgccgactact 22429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 59 - 349
Target Start/End: Complemental strand, 7705 - 7418
Alignment:
Q  59 cagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcgaggaaagacggcctaagaataaggatgttcctgctgagatta 158  Q
    |||||||| |||||||| || ||||| |  ||||| || || ||||||| ||||||||| |  || ||||||||||| ||||||    |||| ||||||     
T  7705 cagagtcgtcctaagccgtacagtgcccccgctgacaaagggaaacagaagatggtcgatgttaggcggcctaagaagaaggata---ctgcagagattg 7609  T
Q  159 cctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctga 258  Q
      | |||||||||||| |||||||||||||| ||||| || || |  |||||| | ||||| ||| |||||||||| |||||||| ||  |  |||||||    
T  7608 tgtgtttcaattgtggtgagaaaggccacaagagcaacgtctgccccgaggaaatcaagaagtgtgtccggtgtggtaagaagggtcatgttgtagctga 7509  T
Q  259 ttgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
    |||||| | |   || ||||| ||||| ||||| || | ||||||||| ||| |||| ||||| |  ||||||||||||||||||||||||    
T  7508 ttgcaaccgtacagacattgtttgctttaattgcaatggagagggtcacattagttcacagtgtactcagcctaagagggcgccgactact 7418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 349
Target Start/End: Complemental strand, 49176 - 48847
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||| | |||||||||  | ||   ||||| || |||||||| ||||| || || | ||| | | ||||||| || |||||||| |||| ||    
T  49176 gctcattacaagatggtgaatgagaagaagggcaagggacagcagagtcgtcctaaaccgtacaatgcccctactgataaagggaaacagagaatggccg 49077  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || ||||||||||| |||||||   || |||| |||   | |||||| | ||| | |||||||||||| ||||||| ||||| ||| ||| | ||    
T  49076 atgataggcggcctaagaagaaggatg---cttctgaaattttgtgtttcaactatggtgggaaaggccacaagagcaatggttgtcctgaagaaattaa 48980  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    ||| ||| |||  |||||||||||||| || ||| ||||||||||||||| |   || ||||| || || || || || |||||||| || ||| |||||    
T  48979 gaagtgtgtccaatgtggcaagaagggtcatatagtagctgattgcaagcgtcaagacattgtatgttttaactgcaatgaagagggacaaattagttct 48880  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| |  ||||||||||||||||||||||||    
T  48879 cagtgtactcagcctaagagggcgccgactact 48847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 335
Target Start/End: Original strand, 163041 - 163113
Alignment:
Q  263 aagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaaga 335  Q
    |||||||  ||| ||||||| |||||||| || ||||||||||||||||||||||| ||| || | |||||||    
T  163041 aagcatgaagatgttgtgtgtttcaattgcaatgaagagggtcatattggttctcaatgcgagaaacctaaga 163113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0865 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 215 - 335
Target Start/End: Original strand, 1260 - 1380
Alignment:
Q  215 aagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggtt 314  Q
    ||||| |||||||| ||||| ||||| || |||| ||| ||||| || |||| ||||||||||||||||| ||||||| | ||||||||||||||| | |    
T  1260 aagaagtgtttccgatgtgggaagaaaggacacacattggctgagtgtaagcgtggtgatattgtgtgctacaattgtgatgaagagggtcatattagct 1359  T
Q  315 ctcagtgcaagcagcctaaga 335  Q
    ||||||||| | |||||||||    
T  1360 ctcagtgcaggaagcctaaga 1380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 341
Target Start/End: Complemental strand, 531 - 207
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||| ||| |||||||||||| | |  | || || || |||||||| |||||||| || ||||||| |||||||||||| |||| ||| ||||| |    
T  531 gctcattataagattgtgaatgagcagaaagccaaaggtcagcagagtcgtcctaagccttacagtgctcctgctgataagggtaaaccgagaatggttg 432  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || ||  |||||||||| || |||| || ||  ||||||  ||  |  | |||||| |||||||||||||| || |||| ||||| ||  || || ||    
T  431 atgataggtggcctaagaagaaagatgctcttgtggagattgtctgctatacttgtggtgagaaaggccacaagagtaatgcttgtcctggagatgtgaa 332  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    || ||| || || ||||| |||||||| ||   | ||||||| | ||| |||| ||||||||||||||| ||||| || || || ||||| ||||||||     
T  331 gagatggtttcgctgtggtaagaagggtcatgcactagctgagtccaaacatgatgatattgtgtgctttaattgcaatgaggaaggtcacattggttcg 232  T
Q  317 cagtgcaagcagcctaagagggcgc 341  Q
    ||||| ||| ||||||||| |||||    
T  231 cagtgtaagaagcctaagaaggcgc 207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 341
Target Start/End: Complemental strand, 4948 - 4624
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||| ||| |||||||||||| | |  | || || || |||||||| |||||||| || ||||||| |||||||||||| |||| ||| ||||| |    
T  4948 gctcattataagattgtgaatgagcagaaagccaaaggtcagcagagtcgtcctaagccttacagtgctcctgctgataagggtaaaccgagaatggttg 4849  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || ||  |||||||||| || |||| || ||  ||||||  ||  |  | |||||| |||||||||||||| || |||| ||||| ||  || || ||    
T  4848 atgataggtggcctaagaagaaagatgctcttgtggagattgtctgctatacttgtggtgagaaaggccacaagagtaatgcttgtcctggagatgtgaa 4749  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    || ||| || || ||||| |||||||| ||   | ||||||| | ||| |||| ||||||||||||||| ||||| || || || ||||| ||||||||     
T  4748 gagatggtttcgctgtggtaagaagggtcatgcactagctgagtccaaacatgatgatattgtgtgctttaattgcaatgaggaaggtcacattggttcg 4649  T
Q  317 cagtgcaagcagcctaagagggcgc 341  Q
    ||||| ||| ||||||||| |||||    
T  4648 cagtgtaagaagcctaagaaggcgc 4624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 24520 - 24616
Alignment:
Q  21 attacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcga 117  Q
    |||||||| | |||||||||||| |||||||||  ||| ||||||||||||| || |||||||| | |||||||||||| |||||||||||||||||    
T  24520 attacaagatcgtgaatgagcggaagactaaggatcaatagagtcgccctaaaccttatagtgcccctgctgataagggtaaacagaggatggtcga 24616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 215 - 349
Target Start/End: Original strand, 24700 - 24834
Alignment:
Q  215 aagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggtt 314  Q
    |||| ||||||||| ||||| ||||| || ||   | ||||||| ||||| |||| |||||| || ||||| || || || || ||| |||| |||||||    
T  24700 aagagatgtttccgttgtggaaagaaaggtcatgcactagctgagtgcaaacatgatgatatagtatgctttaactgcaatgaggagcgtcacattggtt 24799  T
Q  315 ctcagtgcaagcagcctaagagggcgccgactact 349  Q
    | ||||||||| ||||||||| |||||||||||||    
T  24800 cacagtgcaagaagcctaagaaggcgccgactact 24834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 215 - 335
Target Start/End: Original strand, 28273 - 28393
Alignment:
Q  215 aagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggtt 314  Q
    ||||| |||||||| ||||| ||||| || |||| ||| ||||| || |||| ||||||||||||||||| ||||||| | ||||||||||||||| | |    
T  28273 aagaagtgtttccgatgtgggaagaaaggacacacattggctgagtgtaagcgtggtgatattgtgtgctacaattgtgatgaagagggtcatattagct 28372  T
Q  315 ctcagtgcaagcagcctaaga 335  Q
    ||||||||| | |||||||||    
T  28373 ctcagtgcaggaagcctaaga 28393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 110697 - 111029
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    |||||||||||| |||||||||||||| |    || || || ||||| || ||||||||  | ||||||| ||| |||||||| || ||||| ||||| |    
T  110697 gctcattacaagattgtgaatgagcggaaagtcaaaggtcagcagagccgtcctaagcctcacagtgctcctgccgataaggggaagcagagaatggttg 110796  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || || ||||  || || |||| ||||| |||||||  ||  |  | |||||| |||||||||||||| || |||| |||||||| |||  | ||    
T  110797 atgagaggcgccctagaaagaaagatgctcctgttgagattgtctgctatacttgtggtgagaaaggccacaagagtaatgcttgtcttggggacatgaa 110896  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
    || |||||| || ||||| ||||| || || | | ||||||| || || |||| |||||| || ||||| ||||| || || || ||||| ||||||||     
T  110897 gagatgttttcgatgtggtaagaaaggtcatacactagctgagtgtaaacatgatgatatagtatgctttaattgcaatgaggaaggtcacattggttcg 110996  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||||||| ||||||||| ||||| |||||||    
T  110997 cagtgcaagaagcctaagaaggcgcagactact 111029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 62 - 347
Target Start/End: Complemental strand, 19119 - 18834
Alignment:
Q  62 agtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcgaggaaagacggcctaagaataaggatgttcctgctgagattacct 161  Q
    ||||| |||||||| || ||||||| |||||||||||| |||||||| ||||| || || || || || || || || || | ||||| ||| |||  ||    
T  19119 agtcgtcctaagccttacagtgctcctgctgataagggtaaacagagaatggttgatgataggcgccccaaaaagaaagaagctcctgttgaaattgtct 19020  T
Q  162 atttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattg 261  Q
      |  | |||||| |||||||||||||| || |||| |||||  | ||| || ||||  ||||| || ||||| |||||||| ||   | ||||||| ||    
T  19019 gctatacttgtggtgagaaaggccacaagagtaatgcttgtcccggggatgtgaagaggtgttttcgctgtggtaagaagggtcatgcactagctgagtg 18920  T
Q  262 caagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgacta 347  Q
    ||| |||| ||||||||||||||| ||||| || || || ||||| |||||||| | ||| ||| ||||||||| ||||| |||||    
T  18919 caaacatgatgatattgtgtgctttaattgcaatgaggaaggtcacattggttcgctgtgtaagaagcctaagaaggcgcagacta 18834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 315
Target Start/End: Complemental strand, 48243 - 47947
Alignment:
Q  18 ctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcga 117  Q
    ||||||||||| |||||||||||||  |  | || || || |||||||| |||||||| || ||||||| |||||||||||| |||||||| ||||| ||    
T  48243 ctcattacaagattgtgaatgagcgaaaagccaaaggtcagcagagtcgtcctaagccttacagtgctcctgctgataagggtaaacagagaatggttga 48144  T
Q  118 ggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaag 217  Q
     || || || ||||  || || |||| ||||| |||||||  ||  |  | |||||| |||||||||||||| || |||| ||||| || ||| |||||     
T  48143 tgagaggcgccctagaaagaaagatgctcctgttgagattgtctgctatacttgtggtgagaaaggccacaagagtaatgcttgtcctg-ggatgtaaaa 48045  T
Q  218 aaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttc 315  Q
    | |||||| || | ||| ||||| || ||   | ||||||| ||||| |||| ||||||||||||||| || || || || || |||||||| |||||    
T  48044 agatgttttcgctatggtaagaaaggtcatgcactagctgagtgcaaacatgatgatattgtgtgctttaactgcaatgaggaaggtcatataggttc 47947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 349
Target Start/End: Original strand, 55262 - 55592
Alignment:
Q  18 ctcattacaaggttgtgaatgagcggta-gactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcg 116  Q
    ||||||||||| |||||||||||||  | ||| |||| | | |||||||| |||||| | || ||||||| |||||||||||| |||||||| ||||| |    
T  55262 ctcattacaagattgtgaatgagcgaaaagacaaaggtc-agcagagtcgtcctaagacttacagtgctcctgctgataagggtaaacagagaatggttg 55360  T
Q  117 aggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaa 216  Q
    | || || || ||||  || || |||| ||||| |||||||  ||  |  | |||||| |||||||||||||| || |||| || || || ||| |||||    
T  55361 atgagaggcgccctagaaagaaagatgctcctgttgagattgtctgctatacttgtggtgagaaaggccacaagagtaatgcttatcctg-ggatgtaaa 55459  T
Q  217 gaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttct 316  Q
     | |||||| || | ||| ||||| || ||   | ||||||| ||||| |||| ||||||||||||||| || || || || || ||||||||  ||||     
T  55460 aagatgttttcgctatggtaagaaaggtcatgcactagctgagtgcaaacatgatgatattgtgtgctttaactgcaatgaggaaggtcatataagttca 55559  T
Q  317 cagtgcaagcagcctaagagggcgccgactact 349  Q
    || |||||| ||| ||||| ||||| |||||||    
T  55560 caatgcaagaagcttaagaaggcgcagactact 55592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 338
Target Start/End: Original strand, 200510 - 200588
Alignment:
Q  260 tgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagaggg 338  Q
    ||||||| |||||||||||| |||||||||||| | ||||| |||||| || |||| ||||||||| ||||||||||||    
T  200510 tgcaagcgtggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaagaagcctaagaggg 200588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 3)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 170 - 323
Target Start/End: Original strand, 64545 - 64698
Alignment:
Q  170 tgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatg 269  Q
    |||||||||||||||||||| || |||||||||    |||| |  |||||||||||| |||||||  |||| || |||| | ||||| ||||||||| ||    
T  64545 tgtggcgagaaaggccacaagagtaatgtttgtaccaaggatgagaagaaatgtttcaggtgtggtcagaaaggacacacactagctaattgcaagcgtg 64644  T
Q  270 gtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgca 323  Q
    ||||| | || ||||  |||||| | |||||||| |||||| |||| |||||||    
T  64645 gtgatgtagtttgctataattgtgatgaagagggccatattagttcacagtgca 64698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 323
Target Start/End: Original strand, 49123 - 49276
Alignment:
Q  170 tgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatg 269  Q
    ||||||||||| |||||||| || |||||||||    |||| |  |||||||||||| |||||||  |||| || |||| | ||||| ||||||||| ||    
T  49123 tgtggcgagaagggccacaagagtaatgtttgtaccaaggatgagaagaaatgtttcaggtgtggtcagaaaggacacacactagctaattgcaagcgtg 49222  T
Q  270 gtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgca 323  Q
    ||||| | || ||||  |||||| | |||||||| |||||| |||| |||||||    
T  49223 gtgatgtagtttgctataattgtgatgaagagggccatattagttcacagtgca 49276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 323
Target Start/End: Original strand, 58157 - 58310
Alignment:
Q  170 tgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatg 269  Q
    ||||||||||| |||||||| || |||||||||    |||| |  |||||||||||| |||||||  |||| || |||| | ||||| ||||||||| ||    
T  58157 tgtggcgagaagggccacaagagtaatgtttgtaccaaggatgagaagaaatgtttcaggtgtggtcagaaaggacacacactagctaattgcaagcgtg 58256  T
Q  270 gtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgca 323  Q
    ||||| | || ||||  |||||| | |||||||| |||||| |||| |||||||    
T  58257 gtgatgtagtttgctataattgtgatgaagagggccatattagttcacagtgca 58310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 215 - 335
Target Start/End: Complemental strand, 29843 - 29723
Alignment:
Q  215 aagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggtt 314  Q
    ||||| |||||||||||||| | ||| || |||| | ||||||| ||||||| ||||||| |||| |||| ||||||| | ||||| ||||||||| | |    
T  29843 aagaagtgtttccggtgtgggacgaaaggacacacaatagctgagtgcaagcgtggtgatgttgtttgctacaattgtgatgaagaaggtcatattagct 29744  T
Q  315 ctcagtgcaagcagcctaaga 335  Q
    | ||||||| | |||||||||    
T  29743 cgcagtgcaggaagcctaaga 29723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 254 - 349
Target Start/End: Original strand, 57641 - 57736
Alignment:
Q  254 gctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| || ||||||| |||  ||||||| ||||||||||| ||||| |||||||||||||| || || ||| ||||||||| ||||| |||||||    
T  57641 gctgagtgtaagcatgatgacgttgtgtgtttcaattgtaatgaagaaggtcatattggttcgcaatgtaagaagcctaagaaggcgcagactact 57736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 59 - 325
Target Start/End: Original strand, 17809 - 18075
Alignment:
Q  59 cagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcgaggaaagacggcctaagaataaggatgttcctgctgagatta 158  Q
    |||||||| |||||||| || ||||||| |||||||||||| ||| |||| ||||| || || || || ||||  || || |||| | ||| |||||||     
T  17809 cagagtcgtcctaagccttacagtgctcctgctgataagggtaaatagagaatggttgatgagaggcgccctagaaagaaagatgcttctgttgagattg 17908  T
Q  159 cctatttcaattgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctga 258  Q
     ||| |    |||||| |||||||||||||| || ||||||||||  | ||| || || | |||||| || ||||| |||||||| || | | | |||||    
T  17909 tctactattcttgtggtgagaaaggccacaagagtaatgtttgtccgggggatgtgaaaagatgttttcgttgtgggaagaagggacatacacttgctga 18008  T
Q  259 ttgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaag 325  Q
     || || |||| ||||||||| | ||| ||||| || || || ||||| |||||||| |||||||||    
T  18009 gtgtaaacatgatgatattgtatactttaattgcaatgaggaaggtcacattggttcgcagtgcaag 18075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 335
Target Start/End: Complemental strand, 11226 - 10982
Alignment:
Q  90 ctgataagggcaaacagaggatggtcgaggaaagacggcctaagaataaggatgttcctgctgagattacctatttcaattgtggcgagaaaggccacaa 189  Q
    |||||||||| |||||||| ||||| || || ||||| ||||  || || || | ||||| |||||||  || ||  | || ||| |||||| |||||||    
T  11226 ctgataagggtaaacagagaatggttgatgatagacgccctagaaagaaagaagctcctgttgagattgtctgttatacttatggtgagaaatgccacaa 11127  T
Q  190 cagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaat 289  Q
     || |||| ||||| || ||| || || | |||||| || ||||| |||||||| ||   | ||||||| ||||| |||| ||||||||||||||| |||    
T  11126 gagtaatgcttgtcctg-ggatgtgaaaagatgttttcgctgtggtaagaagggtcatgcactagctgagtgcaaacatgatgatattgtgtgctttaat 11028  T
Q  290 tgtaaggaagagggtcatattggttctcagtgcaagcagcctaaga 335  Q
    || || || || ||||| |||||||| ||||| ||| |||||||||    
T  11027 tgcaatgaggaaggtcacattggttcgcagtgtaagaagcctaaga 10982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 215 - 323
Target Start/End: Complemental strand, 176303 - 176195
Alignment:
Q  215 aagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggtt 314  Q
    ||||| |||||  ||||||| ||||| || |||| ||||||||||||||||| ||||||| |||| ||||  |||||| | ||||| ||||||||| | |    
T  176303 aagaagtgttttaggtgtggaaagaaaggacacacattagctgattgcaagcgtggtgatgttgtttgctataattgtgatgaagaaggtcatattagct 176204  T
Q  315 ctcagtgca 323  Q
    | |||||||    
T  176203 cgcagtgca 176195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 109
Target Start/End: Original strand, 98405 - 98465
Alignment:
Q  49 taagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagagg 109  Q
    |||||| ||||||||||| || ||||| |||||||||| |||||| ||||| || ||||||    
T  98405 taagggacaacagagtcgtccgaagccatatagtgctcatgctgacaagggtaagcagagg 98465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 335
Target Start/End: Complemental strand, 12099 - 12024
Alignment:
Q  260 tgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaaga 335  Q
    ||||||| |||||||||||| |||||||||||| | ||||| |||||| || |||| ||||||| | |||||||||    
T  12099 tgcaagcgtggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaagcctaaga 12024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 108
Target Start/End: Original strand, 65109 - 65203
Alignment:
Q  14 aaagctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagag 108  Q
    |||||||||||||||||  ||| |||| |   || ||| || |||||||||||||| ||||| |||||||| | ||||||||||||||| |||||    
T  65109 aaagctcattacaaggtgatgagtgagagaaggaataatggacaacagagtcgcccgaagccatatagtgcccctgctgataagggcaagcagag 65203  T

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Target: scaffold0167 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 5528 - 5475
Alignment:
Q  56 caacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagagg 109  Q
    ||||||||||| ||||| || |||||||||| |||||||||||| |||||||||    
T  5528 caacagagtcgtcctaaaccatatagtgctcctgctgataagggaaaacagagg 5475  T

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Target: scaffold0609 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 335
Target Start/End: Complemental strand, 1255 - 1135
Alignment:
Q  215 aagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggtt 314  Q
    ||||| || ||||| ||||| |||||||| || |   ||||||| ||||||| |||||||||||| |||||||||||| | ||| | |||||| |  |||    
T  1255 aagaagtgcttccgatgtggaaagaaggggcatacgatagctgaatgcaagcgtggtgatattgtttgcttcaattgtgacgaataaggtcatctcagtt 1156  T
Q  315 ctcagtgcaagcagcctaaga 335  Q
    | ||||| ||| |||||||||    
T  1155 cacagtgtaagaagcctaaga 1135  T

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Target: scaffold0529 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 335
Target Start/End: Complemental strand, 5356 - 5284
Alignment:
Q  263 aagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaaga 335  Q
    ||||||| |||| | ||||| ||||| || || ||||| |||||||||||||| ||||||||| |||||||||    
T  5356 aagcatgatgatgtggtgtgtttcaaatgcaatgaagaaggtcatattggttcgcagtgcaagaagcctaaga 5284  T

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Target: scaffold0507 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 105
Target Start/End: Complemental strand, 11542 - 11454
Alignment:
Q  17 gctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaaca 105  Q
    |||||||||||||||||||||||| || |    ||||| || || ||||| || ||||| |||||||| | ||||||||||||||||||    
T  11542 gctcattacaaggttgtgaatgagaggaaaggcaagggtcagcaaagtcgtcccaagccttatagtgcccctgctgataagggcaaaca 11454  T

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Target: scaffold0165 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 335
Target Start/End: Complemental strand, 12276 - 12156
Alignment:
Q  215 aagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggtt 314  Q
    ||||| |||||| | |||||  |||| || |||| ||| ||||||||||||  ||| |||||||| |||| ||| ||||| ||||| || |||||| |||    
T  12276 aagaagtgtttcagatgtggacagaaaggacacacattggctgattgcaagtgtggggatattgtttgctacaactgtaatgaagaaggacatattagtt 12177  T
Q  315 ctcagtgcaagcagcctaaga 335  Q
    | ||||| | |||||||||||    
T  12176 cacagtgtacgcagcctaaga 12156  T

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Target: scaffold0054 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 335
Target Start/End: Original strand, 63507 - 63627
Alignment:
Q  215 aagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggtt 314  Q
    ||||| |||||| |||||||  |||| || ||||  ||||||||||| |||||||| |||||||| |||| ||| | ||| || || ||||||||  |||    
T  63507 aagaagtgtttcaggtgtggtcagaaaggacacactttagctgattgtaagcatggggatattgtttgctacaactataatgaggaaggtcatatcagtt 63606  T
Q  315 ctcagtgcaagcagcctaaga 335  Q
    | ||||| | |||||||||||    
T  63607 cgcagtgtacgcagcctaaga 63627  T

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Target: scaffold0046 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 335
Target Start/End: Complemental strand, 70424 - 70304
Alignment:
Q  215 aagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggtt 314  Q
    ||||| |||||| | |||||  |||| || |||| ||| ||||||||||||| ||| |||||||| |||| ||| ||||| || || || |||||| |||    
T  70424 aagaagtgtttcagatgtggacagaaaggacacacattggctgattgcaagcgtggggatattgtttgctacaactgtaatgaggaaggacatattagtt 70325  T
Q  315 ctcagtgcaagcagcctaaga 335  Q
    | ||||| | |||||||||||    
T  70324 cgcagtgtacgcagcctaaga 70304  T

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Target: scaffold0342 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 349
Target Start/End: Original strand, 14293 - 14388
Alignment:
Q  254 gctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| || ||||||| |||| |||| || |||||||| || ||||| |||||||||||||| || || ||| ||||||||| || || |||||||    
T  14293 gctgaatgtaagcatgatgatgttgtatgtttcaattgcaatgaagaaggtcatattggttcgcaatgtaagaagcctaagaaggtgcagactact 14388  T

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Target: scaffold0335 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 228 - 335
Target Start/End: Original strand, 4305 - 4412
Alignment:
Q  228 ggtgtggcaagaagggccacatattagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagca 327  Q
    |||||||  |||| || |||| ||| ||||||||||||| ||| |||||||| |||| ||| ||||| || || || |||||| |||| ||||| | |||    
T  4305 ggtgtggtcagaaaggacacacattggctgattgcaagcgtggggatattgtttgctacaactgtaatgaggaaggacatattagttcgcagtgtacgca 4404  T
Q  328 gcctaaga 335  Q
    ||||||||    
T  4405 gcctaaga 4412  T

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Target: scaffold0270 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 349
Target Start/End: Complemental strand, 7150 - 7055
Alignment:
Q  254 gctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| || ||||||| |||| ||||||| |||||||| || || || |||||||||||||| || || ||| ||||||||| ||| | |||||||    
T  7150 gctgagtgtaagcatgatgatgttgtgtgtttcaattgcaatgaggaaggtcatattggttcgcaatgtaagaagcctaagaaggcacagactact 7055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 349
Target Start/End: Complemental strand, 14280 - 14185
Alignment:
Q  254 gctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||| || ||||||| |||| ||||||| |||||||| || || || |||||||||||||| || || ||| ||||||||| ||| | |||||||    
T  14280 gctgagtgtaagcatgatgatgttgtgtgtttcaattgcaatgaggaaggtcatattggttcgcaatgtaagaagcctaagaaggcacagactact 14185  T

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Target: scaffold0235 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 170 - 273
Target Start/End: Original strand, 8405 - 8508
Alignment:
Q  170 tgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatg 269  Q
    ||||||||||| |||||||| || |||||||||  | |||| |  ||||| |||||| |||||||  ||||||| ||||   ||||||||||||||| ||    
T  8405 tgtggcgagaatggccacaagagtaatgtttgtactaaggatgagaagaagtgtttcaggtgtggtcagaagggacacactctagctgattgcaagcgtg 8504  T
Q  270 gtga 273  Q
    ||||    
T  8505 gtga 8508  T

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Target: scaffold0235; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 170 - 273
Target Start/End: Original strand, 18619 - 18722
Alignment:
Q  170 tgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatg 269  Q
    ||||||||||| |||||||| || |||||||||  | |||| |  ||||| |||||| |||||||  ||||||| ||||   ||||||||||||||| ||    
T  18619 tgtggcgagaatggccacaagagtaatgtttgtactaaggatgagaagaagtgtttcaggtgtggtcagaagggacacactctagctgattgcaagcgtg 18718  T
Q  270 gtga 273  Q
    ||||    
T  18719 gtga 18722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 16395 - 16478
Alignment:
Q  13 caaagctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataa 96  Q
    ||||||||||||||||||| ||| |||||||  |  |||| | || |||||||| || ||||| |||||||||| |||||||||    
T  16395 caaagctcattacaaggttatgagtgagcggaggggtaagagtcagcagagtcgtccaaagccttatagtgctcctgctgataa 16478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 157
Target Start/End: Complemental strand, 104739 - 104600
Alignment:
Q  18 ctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacagaggatggtcga 117  Q
    ||||||||||| |||||||||||||  |    || || || |||||||| || ||||| |||||||||| |||||||||||| |||||||| ||| | ||    
T  104739 ctcattacaagattgtgaatgagcgaaaagtcaaaggtcagcagagtcgtccaaagccttatagtgctcctgctgataagggaaaacagagaatgattga 104640  T
Q  118 ggaaagacggcctaagaataaggatgttcctgctgagatt 157  Q
     || || |||||||  || || |||| ||||| |||||||    
T  104639 tgagaggcggcctagaaagaaagatgctcctgttgagatt 104600  T

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Target: scaffold0001 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 266 - 341
Target Start/End: Complemental strand, 441917 - 441842
Alignment:
Q  266 catggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgc 341  Q
    |||| |||| ||||||| || || || || |||||||||||||||||||| || |||||| ||||||||| |||||    
T  441917 catgatgatgttgtgtgttttaactgcaatgaagagggtcatattggttcgcaatgcaagaagcctaagaaggcgc 441842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 335
Target Start/End: Original strand, 1053 - 1131
Alignment:
Q  257 gattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaaga 335  Q
    |||||||| |||| |||| | || ||||  || ||||||||||| ||||||||| |||| ||||||||| |||||||||    
T  1053 gattgcaatcatgatgatgtagtttgctataactgtaaggaagaaggtcatattagttcgcagtgcaagaagcctaaga 1131  T

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Target: scaffold0018 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 349
Target Start/End: Original strand, 23334 - 23420
Alignment:
Q  263 aagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||||| |||  ||||||| || || || || ||||||||||| |||||||| || |||||| ||||||||| ||||| |||||||    
T  23334 aagcatgatgacgttgtgtgttttaactgcaacgaagagggtcacattggttcgcaatgcaagaagcctaagaaggcgcagactact 23420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 349
Target Start/End: Original strand, 216456 - 216542
Alignment:
Q  263 aagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaagagggcgccgactact 349  Q
    ||||||| |||| ||||||| || || || || ||||| ||||||||||| || || |||||| ||||||||| ||||| |||||||    
T  216456 aagcatgatgatgttgtgtgttttaactgcaatgaagaaggtcatattgggtcgcaatgcaagaagcctaagaaggcgcagactact 216542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 279
Target Start/End: Original strand, 4792 - 4901
Alignment:
Q  170 tgtggcgagaaaggccacaacagcaatgtttgtcttgaggaagtaaagaaatgtttccggtgtggcaagaagggccacatattagctgattgcaagcatg 269  Q
    |||||| ||||||||||||| || |||||||||    | || |  ||||| || ||| |||||||  ||||||| ||||| |||||||||||||||| ||    
T  4792 tgtggccagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggacagaagggtcacatgttagctgattgcaagcgtg 4891  T
Q  270 gtgatattgt 279  Q
    ||||| ||||    
T  4892 gtgatgttgt 4901  T

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Target: scaffold0230 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 318
Target Start/End: Original strand, 18386 - 18447
Alignment:
Q  257 gattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctca 318  Q
    ||||||||||||| |||| | ||||| ||||| ||||| ||||| ||||| |||||||||||    
T  18386 gattgcaagcatgatgatgtggtgtgtttcaactgtaatgaagaaggtcacattggttctca 18447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 5461 - 5377
Alignment:
Q  251 ttagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaaga 335  Q
    ||||||||||| |||| ||| ||| |||| |||| ||| ||||| ||||| ||||||||  |||| ||||| | |||||||||||    
T  5461 ttagctgattgtaagcgtggggatgttgtttgctacaactgtaatgaagaaggtcatatcagttcgcagtgtacgcagcctaaga 5377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 5720 - 5636
Alignment:
Q  251 ttagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaaga 335  Q
    ||||||||||| |||| ||| ||| |||| |||| ||||||||| ||||| ||||||||  |||| ||||| | ||| |||||||    
T  5720 ttagctgattgtaagcgtggggatgttgtttgctacaattgtaatgaagaaggtcatatcagttcgcagtgtacgcaacctaaga 5636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 112
Target Start/End: Original strand, 33153 - 33257
Alignment:
Q  8 gacatcaaagctcattacaaggttgtgaatgagcggtagactaagggccaacagagtcgccctaagccctatagtgctcttgctgataagggcaaacaga 107  Q
    |||| ||||||||||||||||||  ||| ||||||   |  |||||| || |||||||| ||||| || || ||||||| |||||| || || |||||||    
T  33153 gacaccaaagctcattacaaggtgatgagtgagcgaaggggtaagggacagcagagtcgtcctaaaccatacagtgctcctgctgacaaaggaaaacaga 33252  T
Q  108 ggatg 112  Q
    |||||    
T  33253 ggatg 33257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 43443 - 43527
Alignment:
Q  251 ttagctgattgcaagcatggtgatattgtgtgcttcaattgtaaggaagagggtcatattggttctcagtgcaagcagcctaaga 335  Q
    ||||||||||| |||| ||| ||| |||| ||||  |||||| | ||||||||||||||| | || ||||||||| |||| ||||    
T  43443 ttagctgattgtaagcgtggggatgttgtttgctataattgtgatgaagagggtcatattagctcgcagtgcaagaagcccaaga 43527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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