View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8602_high_3 (Length: 240)

Name: NF8602_high_3
Description: NF8602
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8602_high_3
NF8602_high_3
[»] chr5 (6 HSPs)
chr5 (50-113)||(13468495-13468558)
chr5 (184-216)||(13468392-13468424)
chr5 (50-82)||(20257814-20257846)
chr5 (50-82)||(27266980-27267012)
chr5 (50-82)||(34881637-34881669)
chr5 (50-82)||(43261937-43261969)
[»] chr3 (9 HSPs)
chr3 (50-79)||(44907519-44907548)
chr3 (50-82)||(2342414-2342446)
chr3 (50-82)||(4172489-4172521)
chr3 (50-82)||(17237725-17237757)
chr3 (50-82)||(25631647-25631679)
chr3 (50-82)||(31794002-31794034)
chr3 (14-50)||(32246397-32246433)
chr3 (50-82)||(38440697-38440729)
chr3 (50-82)||(46934565-46934597)
[»] chr2 (5 HSPs)
chr2 (50-91)||(3308839-3308880)
chr2 (50-82)||(6173561-6173593)
chr2 (50-82)||(31581839-31581871)
chr2 (50-82)||(34598917-34598949)
chr2 (50-82)||(40660051-40660083)
[»] scaffold0311 (1 HSPs)
scaffold0311 (50-82)||(8645-8677)
[»] scaffold0146 (1 HSPs)
scaffold0146 (50-82)||(16442-16474)
[»] chr8 (2 HSPs)
chr8 (50-82)||(11196822-11196854)
chr8 (50-82)||(32724609-32724641)
[»] chr7 (4 HSPs)
chr7 (50-82)||(1448949-1448981)
chr7 (50-82)||(5546284-5546316)
chr7 (50-82)||(32684610-32684642)
chr7 (50-82)||(35667351-35667383)
[»] chr6 (5 HSPs)
chr6 (50-82)||(4984698-4984730)
chr6 (50-82)||(8196527-8196559)
chr6 (50-82)||(12652865-12652897)
chr6 (50-82)||(23947437-23947469)
chr6 (50-82)||(33740698-33740730)
[»] chr4 (6 HSPs)
chr4 (50-82)||(1531844-1531876)
chr4 (50-82)||(8009479-8009511)
chr4 (50-82)||(25273817-25273849)
chr4 (50-82)||(38706830-38706862)
chr4 (50-82)||(43154141-43154173)
chr4 (50-82)||(51317923-51317955)
[»] chr1 (5 HSPs)
chr1 (50-82)||(18569430-18569462)
chr1 (50-82)||(27872668-27872700)
chr1 (50-82)||(28035068-28035100)
chr1 (50-82)||(30818465-30818497)
chr1 (50-82)||(34519062-34519094)


Alignment Details
Target: chr5 (Bit Score: 56; Significance: 2e-23; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 50 - 113
Target Start/End: Complemental strand, 13468558 - 13468495
Alignment:
Q  50 atgtgaaaatcacttgtttagattgaaatagagggtaaaaaaccaattaggggtgatttcaggt 113  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  13468558 atgtgaaaattacttgtttagattgaaatagagggtaaaaaaccaattagaggtgatttcaggt 13468495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 216
Target Start/End: Complemental strand, 13468424 - 13468392
Alignment:
Q  184 caacttgttggagatggaggagttagagaaagt 216  Q
    |||||||||||||||||||||||||||||||||    
T  13468424 caacttgttggagatggaggagttagagaaagt 13468392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 20257814 - 20257846
Alignment:
Q  50 atgtgaaaatcacttgtttagattgaaatagag 82  Q
    ||||||||||||||| |||||||||||||||||    
T  20257814 atgtgaaaatcacttatttagattgaaatagag 20257846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 27266980 - 27267012
Alignment:
Q  50 atgtgaaaatcacttgtttagattgaaatagag 82  Q
    ||||||||||||||| |||||||||||||||||    
T  27266980 atgtgaaaatcacttatttagattgaaatagag 27267012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Complemental strand, 34881669 - 34881637
Alignment:
Q  50 atgtgaaaatcacttgtttagattgaaatagag 82  Q
    ||||||||||||||| |||||||||||||||||    
T  34881669 atgtgaaaatcacttatttagattgaaatagag 34881637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 43261937 - 43261969
Alignment:
Q  50 atgtgaaaatcacttgtttagattgaaatagag 82  Q
    ||||||||||||||| |||||||||||||||||    
T  43261937 atgtgaaaatcacttatttagattgaaatagag 43261969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 30; Significance: 0.00000008; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 79
Target Start/End: Original strand, 44907519 - 44907548
Alignment:
Q  50 atgtgaaaatcacttgtttagattgaaata 79  Q
    ||||||||||||||||||||||||||||||    
T  44907519 atgtgaaaatcacttgtttagattgaaata 44907548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Complemental strand, 2342446 - 2342414
Alignment:
Q  50 atgtgaaaatcacttgtttagattgaaatagag 82  Q
    ||||||||||||||| |||||||||||||||||    
T  2342446 atgtgaaaatcacttatttagattgaaatagag 2342414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Complemental strand, 4172521 - 4172489
Alignment:
Q  50 atgtgaaaatcacttgtttagattgaaatagag 82  Q
    ||||||||||||||| |||||||||||||||||    
T  4172521 atgtgaaaatcacttatttagattgaaatagag 4172489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Complemental strand, 17237757 - 17237725
Alignment:
Q  50 atgtgaaaatcacttgtttagattgaaatagag 82  Q
    ||||||||||||||| |||||||||||||||||    
T  17237757 atgtgaaaatcacttatttagattgaaatagag 17237725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 25631647 - 25631679
Alignment:
Q  50 atgtgaaaatcacttgtttagattgaaatagag 82  Q
    ||||||||||||||| |||||||||||||||||    
T  25631647 atgtgaaaatcacttatttagattgaaatagag 25631679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Complemental strand, 31794034 - 31794002
Alignment:
Q  50 atgtgaaaatcacttgtttagattgaaatagag 82  Q
    ||||||||||||||| |||||||||||||||||    
T  31794034 atgtgaaaatcacttatttagattgaaatagag 31794002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 50
Target Start/End: Complemental strand, 32246433 - 32246397
Alignment:
Q  14 cataatgttgcactcagacgatgaaatcacgaaaaaa 50  Q
    |||||| | ||||||||||||||||||||||||||||    
T  32246433 cataatttcgcactcagacgatgaaatcacgaaaaaa 32246397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 38440697 - 38440729
Alignment:
Q  50 atgtgaaaatcacttgtttagattgaaatagag 82  Q
    ||||||||||||||| |||||||||||||||||    
T  38440697 atgtgaaaatcacttatttagattgaaatagag 38440729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Complemental strand, 46934597 - 46934565
Alignment:
Q  50 atgtgaaaatcacttgtttagattgaaatagag 82  Q
    ||||||||||||||| |||||||||||||||||    
T  46934597 atgtgaaaatcacttatttagattgaaatagag 46934565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 30; Significance: 0.00000008; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 91
Target Start/End: Complemental strand, 3308880 - 3308839
Alignment:
Q  50 atgtgaaaatcacttgtttagattgaaatagagggtaaaaaa 91  Q
    ||||||||||||||| |||||||||||||| |||| ||||||    
T  3308880 atgtgaaaatcacttatttagattgaaataaaggggaaaaaa 3308839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Complemental strand, 6173593 - 6173561
Alignment:
Q  50 atgtgaaaatcacttgtttagattgaaatagag 82  Q
    ||||||||||||||| |||||||||||||||||    
T  6173593 atgtgaaaatcacttatttagattgaaatagag 6173561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 31581839 - 31581871
Alignment:
Q  50 atgtgaaaatcacttgtttagattgaaatagag 82  Q
    ||||||||||||||| |||||||||||||||||    
T  31581839 atgtgaaaatcacttatttagattgaaatagag 31581871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Complemental strand, 34598949 - 34598917
Alignment:
Q  50 atgtgaaaatcacttgtttagattgaaatagag 82  Q
    ||||||||||||||| |||||||||||||||||    
T  34598949 atgtgaaaatcacttatttagattgaaatagag 34598917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 40660051 - 40660083
Alignment:
Q  50 atgtgaaaatcacttgtttagattgaaatagag 82  Q
    ||||||||||||||| |||||||||||||||||    
T  40660051 atgtgaaaatcacttatttagattgaaatagag 40660083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Complemental strand, 8677 - 8645
Alignment:
Q  50 atgtgaaaatcacttgtttagattgaaatagag 82  Q
    ||||||||||||||| |||||||||||||||||    
T  8677 atgtgaaaatcacttatttagattgaaatagag 8645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 16442 - 16474
Alignment:
Q  50 atgtgaaaatcacttgtttagattgaaatagag 82  Q
    ||||||||||||||| |||||||||||||||||    
T  16442 atgtgaaaatcacttatttagattgaaatagag 16474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Complemental strand, 11196854 - 11196822
Alignment:
Q  50 atgtgaaaatcacttgtttagattgaaatagag 82  Q
    ||||||||||||||| |||||||||||||||||    
T  11196854 atgtgaaaatcacttatttagattgaaatagag 11196822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 32724609 - 32724641
Alignment:
Q  50 atgtgaaaatcacttgtttagattgaaatagag 82  Q
    ||||||||||||||| |||||||||||||||||    
T  32724609 atgtgaaaatcacttatttagattgaaatagag 32724641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 29; Significance: 0.0000003; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 1448949 - 1448981
Alignment:
Q  50 atgtgaaaatcacttgtttagattgaaatagag 82  Q
    ||||||||||||||| |||||||||||||||||    
T  1448949 atgtgaaaatcacttatttagattgaaatagag 1448981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Complemental strand, 5546316 - 5546284
Alignment:
Q  50 atgtgaaaatcacttgtttagattgaaatagag 82  Q
    ||||||||||||||| |||||||||||||||||    
T  5546316 atgtgaaaatcacttatttagattgaaatagag 5546284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Complemental strand, 32684642 - 32684610
Alignment:
Q  50 atgtgaaaatcacttgtttagattgaaatagag 82  Q
    ||||||||||||||| |||||||||||||||||    
T  32684642 atgtgaaaatcacttatttagattgaaatagag 32684610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 35667351 - 35667383
Alignment:
Q  50 atgtgaaaatcacttgtttagattgaaatagag 82  Q
    ||||||||||||||| |||||||||||||||||    
T  35667351 atgtgaaaatcacttatttagattgaaatagag 35667383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 29; Significance: 0.0000003; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 4984698 - 4984730
Alignment:
Q  50 atgtgaaaatcacttgtttagattgaaatagag 82  Q
    ||||||||||||||| |||||||||||||||||    
T  4984698 atgtgaaaatcacttatttagattgaaatagag 4984730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 8196527 - 8196559
Alignment:
Q  50 atgtgaaaatcacttgtttagattgaaatagag 82  Q
    ||||||||||||||| |||||||||||||||||    
T  8196527 atgtgaaaatcacttatttagattgaaatagag 8196559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Complemental strand, 12652897 - 12652865
Alignment:
Q  50 atgtgaaaatcacttgtttagattgaaatagag 82  Q
    ||||||||||||||| |||||||||||||||||    
T  12652897 atgtgaaaatcacttatttagattgaaatagag 12652865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 23947437 - 23947469
Alignment:
Q  50 atgtgaaaatcacttgtttagattgaaatagag 82  Q
    ||||||||||||||| |||||||||||||||||    
T  23947437 atgtgaaaatcacttatttagattgaaatagag 23947469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 33740698 - 33740730
Alignment:
Q  50 atgtgaaaatcacttgtttagattgaaatagag 82  Q
    ||||||||||||||| |||||||||||||||||    
T  33740698 atgtgaaaatcacttatttagattgaaatagag 33740730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 29; Significance: 0.0000003; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Complemental strand, 1531876 - 1531844
Alignment:
Q  50 atgtgaaaatcacttgtttagattgaaatagag 82  Q
    ||||||||||||||| |||||||||||||||||    
T  1531876 atgtgaaaatcacttatttagattgaaatagag 1531844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 8009479 - 8009511
Alignment:
Q  50 atgtgaaaatcacttgtttagattgaaatagag 82  Q
    ||||||||||||||| |||||||||||||||||    
T  8009479 atgtgaaaatcacttatttagattgaaatagag 8009511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Complemental strand, 25273849 - 25273817
Alignment:
Q  50 atgtgaaaatcacttgtttagattgaaatagag 82  Q
    ||||||||||||||| |||||||||||||||||    
T  25273849 atgtgaaaatcacttatttagattgaaatagag 25273817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 38706830 - 38706862
Alignment:
Q  50 atgtgaaaatcacttgtttagattgaaatagag 82  Q
    ||||||||||||||| |||||||||||||||||    
T  38706830 atgtgaaaatcacttatttagattgaaatagag 38706862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 43154141 - 43154173
Alignment:
Q  50 atgtgaaaatcacttgtttagattgaaatagag 82  Q
    ||||||||||||||| |||||||||||||||||    
T  43154141 atgtgaaaatcacttatttagattgaaatagag 43154173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Complemental strand, 51317955 - 51317923
Alignment:
Q  50 atgtgaaaatcacttgtttagattgaaatagag 82  Q
    ||||||||||||||| |||||||||||||||||    
T  51317955 atgtgaaaatcacttatttagattgaaatagag 51317923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 29; Significance: 0.0000003; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 18569430 - 18569462
Alignment:
Q  50 atgtgaaaatcacttgtttagattgaaatagag 82  Q
    ||||||||||||||| |||||||||||||||||    
T  18569430 atgtgaaaatcacttatttagattgaaatagag 18569462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Complemental strand, 27872700 - 27872668
Alignment:
Q  50 atgtgaaaatcacttgtttagattgaaatagag 82  Q
    ||||||||||||||| |||||||||||||||||    
T  27872700 atgtgaaaatcacttatttagattgaaatagag 27872668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Complemental strand, 28035100 - 28035068
Alignment:
Q  50 atgtgaaaatcacttgtttagattgaaatagag 82  Q
    ||||||||||||||| |||||||||||||||||    
T  28035100 atgtgaaaatcacttatttagattgaaatagag 28035068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 30818465 - 30818497
Alignment:
Q  50 atgtgaaaatcacttgtttagattgaaatagag 82  Q
    ||||||||||||||| |||||||||||||||||    
T  30818465 atgtgaaaatcacttatttagattgaaatagag 30818497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Complemental strand, 34519094 - 34519062
Alignment:
Q  50 atgtgaaaatcacttgtttagattgaaatagag 82  Q
    ||||||||||||||| |||||||||||||||||    
T  34519094 atgtgaaaatcacttatttagattgaaatagag 34519062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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