View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8602_low_2 (Length: 262)
Name: NF8602_low_2
Description: NF8602
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8602_low_2 |
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Alignment Details
Target: chr8 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 22431279 - 22431316
Alignment:
| Q |
185 |
aacgaaattgaagacccaaatgggagtaacagtacctg |
222 |
Q |
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| T |
22431279 |
aacgaaattgaagacccaaatgggagtaacagtacctg |
22431316 |
T |
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Target: chr5 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 17482813 - 17482850
Alignment:
| Q |
185 |
aacgaaattgaagacccaaatgggagtaacagtacctg |
222 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
17482813 |
aacgaaattgaagacccaaatgggagtaacagtacctg |
17482850 |
T |
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