View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8603_low_3 (Length: 897)

Name: NF8603_low_3
Description: NF8603
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8603_low_3
NF8603_low_3
[»] chr7 (66 HSPs)
chr7 (89-713)||(11685331-11685949)
chr7 (409-713)||(34784134-34784441)
chr7 (583-883)||(45464683-45464983)
chr7 (737-889)||(11684057-11684209)
chr7 (583-883)||(4321375-4321673)
chr7 (313-889)||(38614327-38614883)
chr7 (584-889)||(2168343-2168649)
chr7 (583-883)||(34692250-34692554)
chr7 (583-883)||(48302444-48302744)
chr7 (583-812)||(1547241-1547467)
chr7 (579-864)||(3690440-3690725)
chr7 (583-692)||(30108857-30108966)
chr7 (377-574)||(34784953-34785140)
chr7 (583-889)||(23954794-23955099)
chr7 (722-883)||(30109024-30109185)
chr7 (396-563)||(6058312-6058479)
chr7 (598-889)||(46994970-46995261)
chr7 (582-864)||(36756398-36756681)
chr7 (582-864)||(36762195-36762478)
chr7 (583-654)||(19712014-19712085)
chr7 (582-713)||(36766074-36766205)
chr7 (598-712)||(40785216-40785330)
chr7 (370-481)||(3690206-3690317)
chr7 (368-605)||(19712098-19712333)
chr7 (396-538)||(25971762-25971904)
chr7 (311-481)||(45465108-45465277)
chr7 (579-713)||(46810995-46811129)
chr7 (398-563)||(43009516-43009681)
chr7 (399-563)||(46866550-46866714)
chr7 (374-481)||(47339836-47339943)
chr7 (579-693)||(7403476-7403590)
chr7 (585-713)||(8421712-8421840)
chr7 (313-481)||(23955209-23955376)
chr7 (580-698)||(13036191-13036309)
chr7 (579-713)||(45360929-45361062)
chr7 (24-68)||(11685971-11686015)
chr7 (313-481)||(30108565-30108732)
chr7 (585-713)||(35342722-35342850)
chr7 (581-713)||(37791965-37792097)
chr7 (580-714)||(23904917-23905052)
chr7 (379-481)||(2168758-2168860)
chr7 (583-713)||(6605032-6605162)
chr7 (579-713)||(13169302-13169435)
chr7 (311-481)||(33775406-33775575)
chr7 (579-713)||(39857999-39858133)
chr7 (583-713)||(47384608-47384738)
chr7 (722-827)||(48705396-48705499)
chr7 (784-869)||(40785079-40785164)
chr7 (377-481)||(34692672-34692776)
chr7 (641-713)||(48850929-48851001)
chr7 (580-635)||(12904046-12904101)
chr7 (580-698)||(48311427-48311543)
chr7 (444-561)||(3920847-3920964)
chr7 (579-669)||(3921007-3921096)
chr7 (683-770)||(12903939-12904026)
chr7 (583-713)||(38549845-38549975)
chr7 (369-477)||(4321093-4321201)
chr7 (580-712)||(22155495-22155626)
chr7 (580-712)||(22211410-22211541)
chr7 (581-713)||(38472573-38472705)
chr7 (361-481)||(46994707-46994827)
chr7 (580-711)||(34775362-34775493)
chr7 (370-481)||(36756807-36756918)
chr7 (370-481)||(36766331-36766442)
chr7 (746-800)||(8421867-8421921)
chr7 (357-426)||(11682824-11682893)
[»] chr8 (62 HSPs)
chr8 (311-713)||(11031427-11031828)
chr8 (583-883)||(40019448-40019748)
chr8 (313-603)||(9186447-9186736)
chr8 (356-713)||(10269206-10269580)
chr8 (580-791)||(25356622-25356834)
chr8 (579-889)||(33369050-33369362)
chr8 (592-883)||(28432520-28432810)
chr8 (580-889)||(9876053-9876361)
chr8 (579-869)||(461467-461756)
chr8 (583-869)||(33158951-33159236)
chr8 (583-713)||(9186302-9186432)
chr8 (580-878)||(38881691-38881992)
chr8 (465-713)||(10267957-10268223)
chr8 (583-813)||(44620244-44620472)
chr8 (579-864)||(1321829-1322115)
chr8 (579-711)||(10770636-10770768)
chr8 (392-576)||(38884665-38884850)
chr8 (580-685)||(25373335-25373440)
chr8 (579-660)||(25705571-25705652)
chr8 (377-481)||(12515147-12515251)
chr8 (579-834)||(42895061-42895317)
chr8 (583-713)||(15684048-15684178)
chr8 (580-686)||(25402504-25402610)
chr8 (580-686)||(25707013-25707119)
chr8 (608-713)||(12515395-12515499)
chr8 (579-698)||(11719746-11719865)
chr8 (579-646)||(25370798-25370865)
chr8 (746-889)||(33748793-33748935)
chr8 (580-713)||(17807313-17807446)
chr8 (579-889)||(31822975-31823276)
chr8 (582-713)||(11790496-11790627)
chr8 (579-713)||(32823938-32824072)
chr8 (722-867)||(25371636-25371781)
chr8 (312-548)||(44620526-44620761)
chr8 (310-481)||(33368756-33368926)
chr8 (313-481)||(40019156-40019323)
chr8 (579-698)||(24527184-24527303)
chr8 (579-697)||(37525149-37525267)
chr8 (579-713)||(41041032-41041166)
chr8 (580-713)||(13484831-13484964)
chr8 (784-869)||(37525333-37525418)
chr8 (312-481)||(42894775-42894943)
chr8 (679-791)||(8655640-8655752)
chr8 (370-481)||(33158712-33158823)
chr8 (312-481)||(37524857-37525025)
chr8 (580-713)||(41824261-41824394)
chr8 (585-713)||(31199781-31199909)
chr8 (313-481)||(32824195-32824362)
chr8 (445-517)||(37803549-37803621)
chr8 (370-481)||(1322238-1322349)
chr8 (370-481)||(24526952-24527063)
chr8 (370-481)||(31823400-31823511)
chr8 (598-713)||(33748644-33748759)
chr8 (836-889)||(11719994-11720047)
chr8 (580-713)||(22273535-22273668)
chr8 (411-516)||(44528062-44528167)
chr8 (397-481)||(461259-461343)
chr8 (581-713)||(29693963-29694095)
chr8 (312-387)||(10267837-10267911)
chr8 (466-573)||(15683899-15684005)
chr8 (817-864)||(32823816-32823863)
chr8 (836-889)||(11790317-11790370)
[»] chr3 (56 HSPs)
chr3 (377-801)||(30501180-30501610)
chr3 (579-887)||(26448037-26448342)
chr3 (422-787)||(40962981-40963352)
chr3 (581-889)||(1847154-1847462)
chr3 (583-883)||(41945600-41945898)
chr3 (581-877)||(32842721-32843017)
chr3 (587-813)||(49494787-49495011)
chr3 (579-880)||(48634872-48635173)
chr3 (579-868)||(24382004-24382293)
chr3 (583-698)||(37865676-37865791)
chr3 (397-563)||(5127289-5127455)
chr3 (598-860)||(31885827-31886088)
chr3 (579-713)||(2975749-2975883)
chr3 (445-563)||(5134544-5134662)
chr3 (583-692)||(33051144-33051253)
chr3 (681-889)||(33112233-33112441)
chr3 (755-883)||(37886239-37886367)
chr3 (679-883)||(23775149-23775353)
chr3 (579-889)||(35861831-35862141)
chr3 (397-563)||(41625193-41625359)
chr3 (737-889)||(45897487-45897640)
chr3 (751-889)||(2975887-2976024)
chr3 (579-864)||(18429030-18429314)
chr3 (370-481)||(33851038-33851149)
chr3 (579-864)||(45255773-45256058)
chr3 (598-864)||(33851291-33851555)
chr3 (313-481)||(33111841-33112008)
chr3 (313-481)||(48635297-48635464)
chr3 (310-481)||(23887195-23887365)
chr3 (378-481)||(26447818-26447921)
chr3 (466-563)||(17260655-17260752)
chr3 (313-481)||(40508493-40508660)
chr3 (311-481)||(18428747-18428914)
chr3 (580-713)||(2378576-2378709)
chr3 (580-713)||(42282135-42282268)
chr3 (464-548)||(54094020-54094104)
chr3 (598-805)||(10380511-10380719)
chr3 (370-481)||(37865440-37865551)
chr3 (579-713)||(610850-610984)
chr3 (393-576)||(7589353-7589540)
chr3 (583-713)||(51686013-51686143)
chr3 (580-713)||(17516608-17516741)
chr3 (580-713)||(21350257-21350390)
chr3 (580-713)||(30598658-30598791)
chr3 (377-561)||(32842493-32842677)
chr3 (377-481)||(41946023-41946127)
chr3 (579-711)||(44268301-44268432)
chr3 (836-882)||(13466609-13466655)
chr3 (579-713)||(23887489-23887622)
chr3 (579-713)||(27897512-27897646)
chr3 (580-705)||(45897342-45897467)
chr3 (370-405)||(51454283-51454318)
chr3 (579-713)||(23291889-23292023)
chr3 (836-889)||(22218719-22218772)
chr3 (369-426)||(31885573-31885630)
chr3 (439-548)||(49494602-49494711)
[»] chr5 (43 HSPs)
chr5 (312-708)||(24497749-24498159)
chr5 (579-713)||(1344478-1344612)
chr5 (583-883)||(42619581-42619875)
chr5 (579-889)||(18726853-18727164)
chr5 (579-881)||(38176923-38177225)
chr5 (579-881)||(38204147-38204449)
chr5 (583-889)||(35291343-35291644)
chr5 (598-889)||(40330004-40330296)
chr5 (579-889)||(32089411-32089725)
chr5 (581-713)||(1343482-1343614)
chr5 (583-813)||(27350095-27350322)
chr5 (736-889)||(43317176-43317329)
chr5 (598-883)||(32836186-32836470)
chr5 (579-813)||(6116465-6116700)
chr5 (737-889)||(18341593-18341745)
chr5 (396-576)||(25509593-25509773)
chr5 (579-713)||(18623765-18623899)
chr5 (377-481)||(1344738-1344842)
chr5 (369-481)||(38176687-38176799)
chr5 (369-481)||(38203911-38204023)
chr5 (313-481)||(40330439-40330606)
chr5 (373-481)||(43316839-43316947)
chr5 (350-481)||(1343257-1343388)
chr5 (579-713)||(32134556-32134690)
chr5 (598-861)||(35400226-35400489)
chr5 (397-481)||(35291131-35291215)
chr5 (580-713)||(34328466-34328600)
chr5 (580-713)||(12738337-12738470)
chr5 (580-713)||(12801160-12801293)
chr5 (580-713)||(27077123-27077256)
chr5 (580-713)||(33257426-33257559)
chr5 (313-481)||(32089849-32090016)
chr5 (313-481)||(32835876-32836043)
chr5 (842-889)||(33257262-33257309)
chr5 (592-710)||(41494167-41494285)
chr5 (579-660)||(30464263-30464344)
chr5 (443-503)||(27350437-27350497)
chr5 (580-660)||(28035772-28035852)
chr5 (369-481)||(33257684-33257796)
chr5 (313-481)||(42619289-42619456)
chr5 (836-883)||(27076963-27077010)
chr5 (579-669)||(28821770-28821860)
chr5 (583-617)||(29620495-29620529)
[»] chr6 (15 HSPs)
chr6 (314-705)||(31210129-31210530)
chr6 (583-883)||(17950853-17951152)
chr6 (583-883)||(35174674-35174974)
chr6 (581-877)||(17936042-17936339)
chr6 (583-883)||(34344824-34345123)
chr6 (583-711)||(4289710-4289838)
chr6 (579-713)||(33277101-33277234)
chr6 (580-713)||(7371453-7371586)
chr6 (314-454)||(21134978-21135117)
chr6 (396-564)||(25170379-25170547)
chr6 (581-705)||(30639903-30640027)
chr6 (310-426)||(4646195-4646310)
chr6 (579-698)||(11356803-11356922)
chr6 (377-561)||(17936384-17936568)
chr6 (583-660)||(33267342-33267419)
[»] chr2 (40 HSPs)
chr2 (583-883)||(11021825-11022125)
chr2 (583-883)||(28247674-28247974)
chr2 (583-713)||(363354-363485)
chr2 (583-872)||(11313127-11313402)
chr2 (583-883)||(38149535-38149836)
chr2 (583-713)||(7744932-7745062)
chr2 (581-888)||(10715400-10715690)
chr2 (580-713)||(17948601-17948734)
chr2 (579-883)||(37418263-37418569)
chr2 (387-594)||(363509-363709)
chr2 (583-889)||(35575-35881)
chr2 (583-706)||(2359394-2359516)
chr2 (397-564)||(4415256-4415423)
chr2 (580-883)||(42880309-42880610)
chr2 (466-563)||(40099115-40099212)
chr2 (313-481)||(42003414-42003581)
chr2 (377-481)||(10715171-10715275)
chr2 (312-548)||(17948784-17949019)
chr2 (443-563)||(14001336-14001454)
chr2 (313-481)||(28248099-28248266)
chr2 (579-713)||(34400628-34400762)
chr2 (579-713)||(42517877-42518011)
chr2 (585-713)||(15373554-15373683)
chr2 (680-840)||(40150664-40150825)
chr2 (579-791)||(40152135-40152346)
chr2 (580-712)||(17697776-17697903)
chr2 (579-713)||(19907036-19907170)
chr2 (746-864)||(42002990-42003108)
chr2 (312-481)||(42880735-42880903)
chr2 (409-481)||(11312946-11313018)
chr2 (585-713)||(41708097-41708225)
chr2 (370-481)||(11021589-11021700)
chr2 (397-503)||(59920-60026)
chr2 (599-713)||(26581316-26581430)
chr2 (313-518)||(7745159-7745363)
chr2 (579-660)||(16377082-16377163)
chr2 (313-481)||(37418693-37418860)
chr2 (580-635)||(4047703-4047758)
chr2 (580-621)||(161813-161854)
chr2 (580-625)||(2359542-2359587)
[»] chr1 (41 HSPs)
chr1 (583-883)||(5784366-5784666)
chr1 (580-889)||(42558248-42558546)
chr1 (583-813)||(51123115-51123342)
chr1 (583-883)||(11152837-11153136)
chr1 (596-713)||(25172701-25172818)
chr1 (579-889)||(31803190-31803500)
chr1 (579-889)||(46637056-46637365)
chr1 (579-864)||(45379374-45379658)
chr1 (585-864)||(44158807-44159088)
chr1 (379-573)||(42558022-42558216)
chr1 (579-864)||(42135761-42136045)
chr1 (397-563)||(43870156-43870322)
chr1 (435-574)||(25172876-25173005)
chr1 (579-711)||(6576774-6576906)
chr1 (746-889)||(18183063-18183205)
chr1 (579-864)||(35478378-35478660)
chr1 (579-713)||(50554500-50554634)
chr1 (579-710)||(33679549-33679680)
chr1 (314-481)||(46636766-46636932)
chr1 (579-713)||(31237139-31237273)
chr1 (580-713)||(18058121-18058254)
chr1 (397-470)||(34041763-34041836)
chr1 (313-481)||(44159218-44159385)
chr1 (583-713)||(15105986-15106116)
chr1 (580-713)||(6817200-6817333)
chr1 (313-482)||(42136167-42136335)
chr1 (313-481)||(5784791-5784958)
chr1 (361-481)||(31803624-31803744)
chr1 (313-481)||(33679259-33679426)
chr1 (630-712)||(18180818-18180900)
chr1 (580-713)||(45045232-45045365)
chr1 (357-518)||(51123442-51123603)
chr1 (445-517)||(51546213-51546285)
chr1 (598-713)||(27952167-27952282)
chr1 (579-713)||(2870712-2870845)
chr1 (579-713)||(3012175-3012309)
chr1 (746-864)||(33679696-33679814)
chr1 (473-571)||(35009511-35009608)
chr1 (470-573)||(3369587-3369689)
chr1 (369-480)||(45379140-45379251)
chr1 (583-621)||(33599542-33599580)
[»] chr4 (59 HSPs)
chr4 (583-883)||(39922506-39922806)
chr4 (583-883)||(39084651-39084951)
chr4 (583-883)||(39190318-39190618)
chr4 (583-883)||(42879576-42879876)
chr4 (312-606)||(230435-230728)
chr4 (583-883)||(43778681-43778979)
chr4 (583-883)||(5485551-5485851)
chr4 (583-882)||(44993100-44993399)
chr4 (313-606)||(39294645-39294937)
chr4 (584-713)||(13438146-13438275)
chr4 (583-883)||(32653130-32653430)
chr4 (594-779)||(25994708-25994897)
chr4 (583-713)||(230740-230869)
chr4 (579-889)||(4519959-4520270)
chr4 (598-864)||(44556917-44557183)
chr4 (640-712)||(39294553-39294625)
chr4 (579-863)||(27626246-27626530)
chr4 (406-563)||(50132945-50133102)
chr4 (580-869)||(51041027-51041314)
chr4 (581-693)||(28100865-28100977)
chr4 (378-476)||(6999229-6999327)
chr4 (581-713)||(13449984-13450107)
chr4 (579-713)||(2691684-2691818)
chr4 (580-713)||(20820290-20820423)
chr4 (579-857)||(35997284-35997568)
chr4 (313-481)||(39085076-39085243)
chr4 (369-481)||(43823494-43823605)
chr4 (585-713)||(47942413-47942541)
chr4 (400-561)||(44973945-44974104)
chr4 (312-481)||(43778388-43778556)
chr4 (580-713)||(54387537-54387670)
chr4 (377-481)||(5485976-5486080)
chr4 (370-478)||(39922934-39923042)
chr4 (370-481)||(2828335-2828446)
chr4 (775-882)||(10544498-10544605)
chr4 (370-481)||(27626652-27626763)
chr4 (598-713)||(44793243-44793358)
chr4 (397-563)||(9590384-9590549)
chr4 (579-713)||(11254378-11254512)
chr4 (585-670)||(10544693-10544778)
chr4 (390-455)||(13437991-13438056)
chr4 (579-660)||(26397635-26397715)
chr4 (580-713)||(49524394-49524527)
chr4 (313-481)||(44992808-44992975)
chr4 (311-426)||(4520430-4520544)
chr4 (466-573)||(26397756-26397862)
chr4 (466-573)||(28100717-28100823)
chr4 (370-481)||(39190743-39190854)
chr4 (579-713)||(35402069-35402202)
chr4 (443-564)||(27383815-27383936)
chr4 (397-481)||(25995036-25995120)
chr4 (849-889)||(27385940-27385980)
chr4 (377-480)||(15450341-15450444)
chr4 (370-481)||(47942670-47942781)
chr4 (728-889)||(28101018-28101179)
chr4 (312-426)||(44556619-44556732)
chr4 (387-424)||(10544952-10544989)
chr4 (416-481)||(32653555-32653620)
chr4 (580-617)||(42982211-42982248)
[»] scaffold0006 (2 HSPs)
scaffold0006 (585-813)||(37856-38082)
scaffold0006 (443-518)||(38166-38241)
[»] scaffold0070 (1 HSPs)
scaffold0070 (579-800)||(57669-57890)
[»] scaffold1041 (2 HSPs)
scaffold1041 (579-646)||(2643-2710)
scaffold1041 (579-646)||(2356-2423)
[»] scaffold0722 (2 HSPs)
scaffold0722 (579-708)||(4446-4574)
scaffold0722 (492-573)||(4327-4407)
[»] scaffold0564 (1 HSPs)
scaffold0564 (580-713)||(9533-9666)
[»] scaffold0345 (1 HSPs)
scaffold0345 (579-698)||(1164-1283)


Alignment Details
Target: chr7 (Bit Score: 456; Significance: 0; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 456; E-Value: 0
Query Start/End: Original strand, 89 - 713
Target Start/End: Complemental strand, 11685949 - 11685331
Alignment:
Q  89 gaagacttgctgtgaatgtggaaaagagcttaagtcatgccccatctgcagaagctgcattaacactagaattaagctttactaaggttattgttgttct 188  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  11685949 gaagacttgttgtgaatgtggaaaagagcttaagtcatgccccatctgcagaagctgcattaacactagaattaagctttactaaggttattgttgtt-- 11685852  T
Q  189 tgttgttgaccattcatgtacatgtatcaatctaattaatgaattttatattactttttct----gccactgcttttcttttctgaattgtttgttttga 284  Q
        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||    |||    
T  11685851 ----gttgaccattcatgtacatgtatcaatctaattaatgaattttatattactttttctttctgccactgcttttcttttctgaattgttt----tga 11685760  T
Q  285 atgtactcttgattcatagaatcgtaaagagtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatat 384  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||| ||  |||||| ||||||||    
T  11685759 atgtactcttgaatcatagaatcgtaaagagtgaatcatcatctttgtttttgaattttgtaaggatcggttaaaatcgttcttcaattatacgaaatat 11685660  T
Q  385 taaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggt 484  Q
    ||||||||| | ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  11685659 taaattagtttctgaatttgtcatatgtcaatcaatttagtcactctgtccaattggagtgttaacggtgctgacgtggccgttaacctctcacatgggt 11685560  T
Q  485 tgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatttgtagaaaatgctttgctctt 584  Q
    |||||| || |||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  11685559 tgccatgtcggatgccacagaagcagggactaatgtggtcgatagcgaccaaaatttccaaggatcaaattgattgatttgtagaaaatgctttgctctt 11685460  T
Q  585 tcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttctt 684  Q
    ||| || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||    
T  11685459 tctcccccaaatatataaaattggaaccctaattttacaatctgtaatctacactccaaaatctccaaaatttctttcaataattagaggtaacgttctt 11685360  T
Q  685 ccccaattcaaaaagcttcaaaccctaat 713  Q
    | |||||||||||||||||||| ||||||    
T  11685359 caccaattcaaaaagcttcaaaacctaat 11685331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 409 - 713
Target Start/End: Original strand, 34784134 - 34784441
Alignment:
Q  409 atgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagc 508  Q
    |||||||||||||||||| |||  |||||||| |||||||||||||| |||||| ||||||||||||||||||          ||| |||||||| ||||    
T  34784134 atgtcaatcaatttagtccctccgtccaattgcagtgttaacggtgctgacgtggccgttaacctctcacatg----------tcatatgccacataagc 34784223  T
Q  509 agagactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatttgtagaaaatg--ctttgctc-----------tttcttcctcaaa 595  Q
    || ||||||| ||   || |||||||||||||||||||||  ||||| ||||||||| ||||||||  |||| |||           |||||||| ||||    
T  34784224 agggactaatttgactgatagtgaccaaaatttccaaggacgaaattgattgatttgcagaaaatgttctttcctccccaacgactctttcttccccaaa 34784323  T
Q  596 tatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaa 695  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||  ||||||||| | |||||||||||||||||||||||||||||||||||    
T  34784324 tatataaaattggaaccctaattttacaatctttaatctacactccaaaatctccaaaatttatgtcaataattagtggtaacgttcttccccaattcaa 34784423  T
Q  696 aaagcttcaaaccctaat 713  Q
    ||| || |||||||||||    
T  34784424 aaaactccaaaccctaat 34784441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 583 - 883
Target Start/End: Complemental strand, 45464983 - 45464683
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||  ||||| ||||||||||||||||  ||| ||||||    
T  45464983 tttcttcctcaaatatataaaattggaactctaattttacaatgtgtaatctacactccaaaatctccaaattttctttcaataattaagggtcacgttc 45464884  T
Q  683 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 782  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||| | |||| || ||||||||    
T  45464883 ttccccaaatcaaaaaattacaaaccctaattttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaatactgttgaaattgaatct 45464784  T
Q  783 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 882  Q
     |||||||| | |||||   || ||||||||  |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  45464783 aaaatgatgggaggtggtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 45464684  T
Q  883 g 883  Q
    |    
T  45464683 g 45464683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 737 - 889
Target Start/End: Complemental strand, 11684209 - 11684057
Alignment:
Q  737 caaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaa-gcaattatgaaagtcaagcttt 835  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||| |||||     
T  11684209 caaaatccccaaaatttcttcaagcaaaattgttcaatttgaatccgaaatgatgaggggtgg-tgtaagggcaaaaagcaattatgaaagtcgagcttc 11684111  T
Q  836 atctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 889  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  11684110 atctttaagctccatgtttaatggtgatgtgagagtacttgaatgttggtgtcc 11684057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 583 - 883
Target Start/End: Original strand, 4321375 - 4321673
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    |||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  | ||| |||||| |||||||||  ||| ||||||    
T  4321375 tttcatccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctcaaaattttcttccaataattaagggtcacgttc 4321474  T
Q  683 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 782  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| | || || ||||||||    
T  4321475 ttccccaaatcaaaaaattgcaaaccctaat-ttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactattgaaattgaatct 4321573  T
Q  783 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 882  Q
     |||||||| |||||||   || ||||||||  |  ||| |||||||||||| ||||| |  |||||||||||||| |||||||||||||||||||||||    
T  4321574 aaaatgatg-ggggtggtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatgttgatgtgagagtgcttgaatgtt 4321672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 313 - 889
Target Start/End: Complemental strand, 38614883 - 38614327
Alignment:
Q  313 gagtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatatgt 412  Q
    ||||||||||||||||  ||| ||||||||| || || ||||| ||| || |||   |||||||| |||||| || |||||| |||| ||||||| ||||    
T  38614883 gagtgaatcatcaactacgtccttgaatttt-tatgggtcggtcaaattcatccctcaattatgcaaaatatcaacttagtccttgagtttgttaaatgt 38614785  T
Q  413 caatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcagag 512  Q
    ||||||| ||||||  | | | |||  |||| |||||||| |  |||||| ||||||||||||||||||          ||||| |||||  | |||| |    
T  38614784 caatcaagttagtccttatgttcaaacggagcgttaacggggttgacgtggccgttaacctctcacatg----------tcagacgccacgtaggcaggg 38614695  T
Q  513 actaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatttgtagaaaatgctttgctctttcttcctcaaatatataaaattggaacc 612  Q
    |||||| ||| ||| | | || || ||||| |||||  ||||| ||||||||| |||||||| ||||  ||||||||| ||  | ||||||||||||| |    
T  38614694 actaatttggccgataataacaaacatttcaaaggactaaattgattgatttgcagaaaatgttttgg-ctttcttccccagctgtataaaattggaatc 38614596  T
Q  613 ctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagcttcaaaccctaa 712  Q
    ||||||  ||||| || ||||||       ||||  |||||||||| | ||||||| ||||||   ||||||| || ||||||||| |||||||||||||    
T  38614595 ctaattacacaatctgcaatcta-------aaatcaccaaaatttcctccaataataagtggtccagttcttctccgattcaaaaaacttcaaaccctaa 38614503  T
Q  713 tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaa 812  Q
    |        |||||||| ||||  |||||||  ||||||||||| |||||||| | || || ||||||||||||||||| ||||||||  || ||| |||    
T  38614502 ttttttcgtattgaatctgaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaattgaatctgaaatgatg-ggggtgggaatatgggaaaa 38614404  T
Q  813 agcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 889  Q
    | || ||||||||||| ||||| ||||| |||||||| || |||||||||||||||||||||| ||||||| |||||    
T  38614403 aacagttatgaaagtcgagcttcatcttcaagctccaagtctaatggtgatgtgagagtgcttaaatgttggtgtcc 38614327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 584 - 889
Target Start/End: Complemental strand, 2168649 - 2168343
Alignment:
Q  584 ttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttct 683  Q
    ||||||| ||| | |||||||||| ||||||||||  ||||| || ||||||||||| |||||  |||||||||| | ||||||| ||| ||   |||||    
T  2168649 ttcttccccaattgtataaaattgtaaccctaattacacaatctgcaatctacactctaaaatcaccaaaatttcctccaataataagtagtccagttct 2168550  T
Q  684 tccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctg 783  Q
    || |||||||||||| ||||||||||||||        |||||||| ||||  |||||||  ||||||||||| |||||||| | || || ||||||||     
T  2168549 tctccaattcaaaaaacttcaaaccctaattttttcgtattgaatctgaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaattgaatcta 2168450  T
Q  784 aaatgatgaggggtgggtgtaaggg--caaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgt 881  Q
    |||||||| ||||||||  || |||   ||||  | ||||||||||| ||||||||||| |||||||| ||||||||||||||| ||||||||  |||||    
T  2168449 aaatgatg-ggggtgggaatatgggaaaaaaaatagttatgaaagtcgagctttatcttcaagctccaagtttaatggtgatgtcagagtgctcaaatgt 2168351  T
Q  882 tgatgtcc 889  Q
    || |||||    
T  2168350 tggtgtcc 2168343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 583 - 883
Target Start/End: Complemental strand, 34692554 - 34692250
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    |||||||| |||||||||||||||||||||||||||||||||| | ||||||||||||||||||  ||||| |||||| |||||||||||||| ||||||    
T  34692554 tttcttccccaaatatataaaattggaaccctaattttacaatgtttaatctacactccaaaatctccaaattttcttccaataattagtggtcacgttc 34692455  T
Q  683 ttccccaattcaaaaagcttcaaacc-ctaa----tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttg 777  Q
    |||||||| |||||||  | |||||| ||||    |        |||||||| ||||  |||||||  |||||||  ||||||||||| | || || |||    
T  34692454 ttccccaaatcaaaaaattccaaaccactaatttttttttttttattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactattgaaattg 34692355  T
Q  778 aatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttga 877  Q
    ||||| |||||||| ||||| |   || ||||||||  |  ||| |||||||||||| ||||| |  || |||||||||| ||||||||||| |||||||    
T  34692354 aatctaaaatgatg-ggggtagtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctacatgtttaatagtgatgtgagaatgcttga 34692256  T
Q  878 atgttg 883  Q
    ||||||    
T  34692255 atgttg 34692250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 583 - 883
Target Start/End: Original strand, 48302444 - 48302744
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    |||||||| |||||||||||||||| ||| ||||||||||||| |||| |||||||||||||||  ||||| || ||| |||||||||   || ||||||    
T  48302444 tttcttccccaaatatataaaattgaaactctaattttacaatgtgtattctacactccaaaatctccaaatttgcttccaataattaagagtcacgttc 48302543  T
Q  683 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 782  Q
    |||||||| |||||||  | |||||||||||        |||||||  ||||  |||||||  |||||||  ||||||||||| |||| || ||||| |     
T  48302544 ttccccaaatcaaaaaattgcaaaccctaattttttttaattgaatatgaaaaccaaaatcttcaaaattcattcaagcaaaactgttgaaattgaaaca 48302643  T
Q  783 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 882  Q
     |||||||  |||||||   || ||||||||  |  ||| ||||||||| || ||||| |   |||||||||||||||||||||||||||||||||||||    
T  48302644 aaaatgattgggggtggtcatatgggcaaaaagagctatcaaagtcaagtttcatcttcatcttccatgtttaatggtgatgtgagagtgcttgaatgtt 48302743  T
Q  883 g 883  Q
    |    
T  48302744 g 48302744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 583 - 812
Target Start/End: Complemental strand, 1547467 - 1547241
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    |||||||| ||||| |||||||||| ||||||||||||||||| | ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||    
T  1547467 tttcttccccaaatgtataaaattgaaaccctaattttacaatctttaatccacactctaaaattcccaaaa-ttctttcaataattagtggtaacgttc 1547369  T
Q  683 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaat-tcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatc 781  Q
    |||||| ||| ||| | | ||||||||||||        ||||||| ||||||   |||||| |||||||| |||||| ||||| ||||  | ||||||     
T  1547368 ttccccgattgaaataacctcaaaccctaat--tttttgattgaattcgaaataaaaaaatccccaaaattccttcaaacaaaactgttgtaattgaata 1547271  T
Q  782 tgaaatgatgaggggtgggtgtaagggcaaa 812  Q
     ||||||||| |||||||||||| |||||||    
T  1547270 cgaaatgatg-ggggtgggtgtatgggcaaa 1547241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 579 - 864
Target Start/End: Original strand, 3690440 - 3690725
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    ||||| |||||| ||| | |||||||||||||||||||||  ||||| || |||||||| || |||||  || ||||||| | ||||||| ||||||       
T  3690440 gctctgtcttccccaattgtataaaattggaaccctaattacacaatttgcaatctacattctaaaatcacctaaatttcctccaataataagtggtcca 3690539  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 778  Q
    |||||||||||||||||||| ||| ||||||||||        |||||||| ||||  |||||||  ||||||||||| |||||||| | || || ||||    
T  3690540 gttcttccccaattcaaaaaacttgaaaccctaattttttcgtattgaatctgaaagccaaaatccacaaaatttcttgaagcaaaactattgaaattga 3690639  T
Q  779 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 864  Q
    |||||||||||   ||||||||  || ||| ||||    ||||||||||||||||| ||||| |||||||| ||||| ||||||||    
T  3690640 atctgaaatgaaatggggtgggaatatgggaaaaaattgttatgaaagtcaagcttcatcttcaagctccaagtttagtggtgatg 3690725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 583 - 692
Target Start/End: Original strand, 30108857 - 30108966
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  30108857 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 30108956  T
Q  683 ttccccaatt 692  Q
    ||||||||||    
T  30108957 ttccccaatt 30108966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 377 - 574
Target Start/End: Complemental strand, 34785140 - 34784953
Alignment:
Q  377 cgaaatattaaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctc 476  Q
    |||||||| ||| |||||  ||||||||| | |||||||||||||||||| |||  ||||||||||||||||||||||| ||||||  ||||||||||||    
T  34785140 cgaaatatcaaaatagtccctgaatttgtaaaatgtcaatcaatttagtccctccgtccaattggagtgttaacggtgctgacgtggtcgttaacctctc 34785041  T
Q  477 acatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatttgtagaaaatg 574  Q
    |||||          |||||||||||| |||||  ||||||| |||  || |||||||||||||| ||||||  ||||| ||||||||| ||||||||    
T  34785040 acatg----------tcagatgccacataagcaaggactaatttggctgatagtgaccaaaattttcaaggacaaaattgattgatttgcagaaaatg 34784953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 583 - 889
Target Start/End: Complemental strand, 23955099 - 23954794
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    |||||||| ||| | |||||||||||||||||||||  ||||| |  | ||||||||| |||||  | |||||||| | ||||||| ||||||   ||||    
T  23955099 tttcttccccaattgtataaaattggaaccctaattacacaatcttcagtctacactctaaaataacaaaaatttcctccaataataagtggtccagttc 23955000  T
Q  683 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 782  Q
    ||| ||||||||| || ||||||||||||||        |||||||| ||||   ||||||  ||||||||||| |||||||| | || |  ||||||||    
T  23954999 ttcgccaattcaacaaacttcaaaccctaatttcttggtattgaatctgaaagctaaaatcctcaaaatttcttgaagcaaaactattgacattgaatct 23954900  T
Q  783 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 882  Q
    ||||||| | |||||| |  || ||  |||| || |||||||| || ||||| |||||  ||||||| ||||||||||| ||| ||||||||||||||||    
T  23954899 gaaatgacg-ggggtgagaatatggaaaaaaacagttatgaaaatcgagcttcatcttcgagctccaagtttaatggtgttgttagagtgcttgaatgtt 23954801  T
Q  883 gatgtcc 889  Q
    | |||||    
T  23954800 ggtgtcc 23954794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 722 - 883
Target Start/End: Original strand, 30109024 - 30109185
Alignment:
Q  722 attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattat 821  Q
    |||||||| |||| ||||||||  |||||||  ||||||||||| |||| || |||||||| |||||||| | |||||   || ||||||||  || |||    
T  30109024 attgaatctgaaaatcaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatctaaaatgatgggaggtggtcatatgggcaaaaagaactat 30109123  T
Q  822 gaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttg 883  Q
     |||||||||||| ||||| |  |||||||||||||||||||||||||||||||||||||||    
T  30109124 caaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgttg 30109185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 396 - 563
Target Start/End: Complemental strand, 6058479 - 6058312
Alignment:
Q  396 ttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcag 495  Q
    |||||||||| |||| |||||||| ||||||  |   |||| |||| | ||||||||||  |||||| |||||||||||||||||| |||||||| ||||    
T  6058479 ttgaatttgtcatatctcaatcaaattagtccttacgtccatttggggcgttaacggtgatgacgtggccgttaacctctcacatgtgttgccatgtcag 6058380  T
Q  496 atgccacagaagcagagactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatt 563  Q
    |||||||| |||||| ||||||  |||| || |||||| ||||||||||||||  ||||| |||||||    
T  6058379 atgccacataagcagggactaaattggttgatagtgacaaaaatttccaaggacgaaattgattgatt 6058312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 598 - 889
Target Start/End: Original strand, 46994970 - 46995261
Alignment:
Q  598 tataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaa 697  Q
    ||||||||||||||| |||||  ||||| || ||||||||||| | |||    |||||||| | ||||||| ||||||   ||||| |||||||||||||    
T  46994970 tataaaattggaaccttaattacacaatctgcaatctacactctataatcatgaaaatttcctccaataataagtggttcagttctgccccaattcaaaa 46995069  T
Q  698 agcttcaaaccctaatannnnnnn-attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgagggg 796  Q
    | || |||||||||||         | |||||  ||||  || ||||  ||||||||||| |||||||| | || || ||||||||||||||||| ||||    
T  46995070 aactccaaaccctaatttttttcgtagtgaatttgaaagccagaatcctcaaaatttcttgaagcaaaactattgaaattgaatctgaaatgatgtgggg 46995169  T
Q  797 tgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 889  Q
    ||||  || ||  | || |  ||||||||||||||||| ||||| |||||||| ||||||||||| ||||||||||||||||||||| |||||    
T  46995170 tgggaatatggaaataa-cggttatgaaagtcaagcttcatcttcaagctccaagtttaatggtgttgtgagagtgcttgaatgttggtgtcc 46995261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 582 - 864
Target Start/End: Complemental strand, 36756681 - 36756398
Alignment:
Q  582 ctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgtt 681  Q
    ||||||||| ||| | |||||||||| ||||||||||  ||||| || ||||||||||| |||||  || ||||||| | ||||||| ||||||   |||    
T  36756681 ctttcttccccaattgtataaaattgaaaccctaattacacaatctgcaatctacactctaaaatcacctaaatttcctccaataataagtggtttagtt 36756582  T
Q  682 cttccccaattcaaaaagcttcaaaccctaa-tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaat 780  Q
    ||||||||||||||||| ||||||||||||| |        ||||||||  |||  |||| ||  ||||||||||| |||||||| | || || |  |||    
T  36756581 cttccccaattcaaaaaacttcaaaccctaatttttttcgtattgaatcataaaaccaaattcctcaaaatttcttgaagcaaaactattgaaataaaat 36756482  T
Q  781 ctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 864  Q
    |  |||||||| ||||||||  || ||| |||| |  ||||||||||| ||||| ||||| |||||||| ||||||||||||||    
T  36756481 ccaaaatgatggggggtgggaatatgggaaaaaactgttatgaaagtcgagcttcatcttcaagctccaagtttaatggtgatg 36756398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 582 - 864
Target Start/End: Complemental strand, 36762478 - 36762195
Alignment:
Q  582 ctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgtt 681  Q
    ||||||||| ||| | |||||||||| ||||||||||  ||||| || ||||||||||| |||||  || ||||||| | ||||||| ||||||   |||    
T  36762478 ctttcttccccaattgtataaaattgaaaccctaattacacaatctgcaatctacactctaaaatcacctaaatttcctccaataataagtggtttagtt 36762379  T
Q  682 cttccccaattcaaaaagcttcaaaccctaa-tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaat 780  Q
    ||||||||||||||||| ||||||||||||| |        ||||||||  |||  |||| ||  ||||||||||| |||||||| | || || |  |||    
T  36762378 cttccccaattcaaaaaacttcaaaccctaatttttttcgtattgaatcataaaaccaaattcctcaaaatttcttgaagcaaaactattgaaataaaat 36762279  T
Q  781 ctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 864  Q
    |  |||||||| ||||||||  || ||| |||| |  ||||||||||| ||||| ||||| |||||||| ||||||||||||||    
T  36762278 ccaaaatgatggggggtgggaatatgggaaaaaactgttatgaaagtcgagcttcatcttcaagctccaagtttaatggtgatg 36762195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 583 - 654
Target Start/End: Complemental strand, 19712085 - 19712014
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaa 654  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  19712085 tttcttccccaaatatataaaattggaaccctaattttacaatctgtaatctacactccaaaatttccaaaa 19712014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 582 - 713
Target Start/End: Complemental strand, 36766205 - 36766074
Alignment:
Q  582 ctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgtt 681  Q
    ||||||||| ||| | |||||||||| |||||||||| |||||| || ||||||||||| |||||  || ||||||| | ||||||| ||||||   |||    
T  36766205 ctttcttccccaattgtataaaattgaaaccctaattatacaatctgcaatctacactctaaaatcacctaaatttcctccaataataagtggtttagtt 36766106  T
Q  682 cttccccaattcaaaaagcttcaaaccctaat 713  Q
    ||||||||||||||||| ||||||||||||||    
T  36766105 cttccccaattcaaaaaacttcaaaccctaat 36766074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 598 - 712
Target Start/End: Complemental strand, 40785330 - 40785216
Alignment:
Q  598 tataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaa 697  Q
    |||||||||| |||||||||| |||||| || |||||||||||||||||  |||||||||| | || |||| ||||||   |||||||||||||||||||    
T  40785330 tataaaattgtaaccctaattgtacaatctgcaatctacactccaaaatcaccaaaatttcctccactaataagtggtccagttcttccccaattcaaaa 40785231  T
Q  698 agcttcaaaccctaa 712  Q
    | |||||||||||||    
T  40785230 atcttcaaaccctaa 40785216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 370 - 481
Target Start/End: Original strand, 3690206 - 3690317
Alignment:
Q  370 aattatgcgaaatattaaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgtta 469  Q
    ||||||||||||||| || ||| || |||||||||||| ||||||||||| ||||||  ||||| |||  |||| |||||||| || ||||||| |||||    
T  3690206 aattatgcgaaatatcaatttaatccttgaatttgttaaatgtcaatcaagttagtccttctattcaaacggagcgttaacggggctgacgtgatcgtta 3690305  T
Q  470 acctctcacatg 481  Q
    ||||||||||||    
T  3690306 acctctcacatg 3690317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 368 - 605
Target Start/End: Complemental strand, 19712333 - 19712098
Alignment:
Q  368 ctaattatgcgaaatattaaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgt 467  Q
    ||||||||| ||||||| | |||||||| ||||||| ||| | ||| |||||  | ||| | |  ||||||| | ||||||||| ||  ||| |  ||||    
T  19712333 ctaattatgtgaaatatcacattagtctctgaatttattagacgtccatcaaaatggtcccaccgtccaatttgggtgttaacgatgttgacatagccgt 19712234  T
Q  468 taacctctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatttgta 567  Q
    | ||||||||||||  ||  ||| ||||||| || | |||||||||||||| | |  || |||||||| || ||| |||||  ||||||||||||||||     
T  19712233 tcacctctcacatgtctt--catgtcagatgtcagacaagcagagactaatttagctgatagtgaccataacttcaaaggactaaattaattgatttgtt 19712136  T
Q  568 gaaaatgctttgctctttcttcctcaaatatataaaat 605  Q
    ||||||| ||||| ||||||||| ||||||||||||||    
T  19712135 gaaaatgttttgccctttcttccccaaatatataaaat 19712098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 396 - 538
Target Start/End: Original strand, 25971762 - 25971904
Alignment:
Q  396 ttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcag 495  Q
    |||||||||| |||| |||||||| |||||| ||   || | |||| | ||||||||||  |||||| |||||||||||||||||| |||||||| ||||    
T  25971762 ttgaatttgtcatatctcaatcaaattagtccctacgtctatttggggcgttaacggtgatgacgtggccgttaacctctcacatgagttgccatgtcag 25971861  T
Q  496 atgccacagaagcagagactaatgtggtcgacagtgaccaaaa 538  Q
    || ||||| |||||||||||||  |||| || |||||| ||||    
T  25971862 ataccacataagcagagactaaattggttgatagtgacaaaaa 25971904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 311 - 481
Target Start/End: Complemental strand, 45465277 - 45465108
Alignment:
Q  311 aagagtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatat 410  Q
    ||||||||||||||||||| ||| ||||||||| || || ||||| ||  ||||||   ||||||||||||||| || ||| ||  ||||||||||| ||    
T  45465277 aagagtgaatcatcaacttcgtccttgaatttt-tacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaat 45465179  T
Q  411 gtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 481  Q
    ||||||||| ||||||  ||  | |||  |||| |||||||| || |||||| ||||||||||||||||||    
T  45465178 gtcaatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggccgttaacctctcacatg 45465108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 579 - 713
Target Start/End: Original strand, 46810995 - 46811129
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||| | ||| | |||||||||||||| ||||||  ||| | || ||||||||||| |||||  || ||||||| | ||||||| ||||||       
T  46810995 gctctttctttcccaattgtataaaattggaactctaattacacagtctgcaatctacactctaaaatcacctaaatttcctccaataataagtggtcca 46811094  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    |||||||||||||||||||| ||||||||||||||    
T  46811095 gttcttccccaattcaaaaaacttcaaaccctaat 46811129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 398 - 563
Target Start/End: Complemental strand, 43009681 - 43009516
Alignment:
Q  398 gaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagat 497  Q
    |||||||| |||||||||||||  ||||  ||   |||| || | ||||||||||||  |||||| ||||| ||||||| ||||| ||| ||| ||||||    
T  43009681 gaatttgtcatatgtcaatcaaactagttccttcgtccatttagggtgttaacggtgatgacgtggccgttgacctctctcatggattgtcatgtcagat 43009582  T
Q  498 gccacagaagcagagactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatt 563  Q
    | |||| ||| || ||||||| ||| ||| |||||||||||||||||||||  ||||| |||||||    
T  43009581 gtcacataagtagggactaatttggccgatagtgaccaaaatttccaaggacgaaattgattgatt 43009516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 399 - 563
Target Start/End: Original strand, 46866550 - 46866714
Alignment:
Q  399 aatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatg 498  Q
    ||||||| |||| | |||||| |||||| || | || | |||| | ||||||||||  |||||| |||||||||||||| |||||||||||| |||||||    
T  46866550 aatttgtcatatttgaatcaaattagtccctatgtctatttggggcgttaacggtgatgacgtggccgttaacctctcatatgggttgccatgtcagatg 46866649  T
Q  499 ccacagaagcagagactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatt 563  Q
    ||||| || ||| ||||||    || || |||||| ||||||||||||||  ||||| |||||||    
T  46866650 ccacataaacagggactaaatatgttgatagtgacaaaaatttccaaggacgaaattgattgatt 46866714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 374 - 481
Target Start/End: Original strand, 47339836 - 47339943
Alignment:
Q  374 atgcgaaatattaaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacct 473  Q
    ||||||||||| || ||| ||||||||||||||| ||||||||||| ||| ||  ||| | |||  ||||||||||||| || |||||||| ||||||||    
T  47339836 atgcgaaatatcaatttaatctttgaatttgttaaatgtcaatcaagttaatccttctgttcaaacggagtgttaacggggctgacgtgactgttaacct 47339935  T
Q  474 ctcacatg 481  Q
    ||||||||    
T  47339936 ctcacatg 47339943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 579 - 693
Target Start/End: Complemental strand, 7403590 - 7403476
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||| | ||||| ||| |||||||||||||| ||||||||||||||||||| | ||||||||  |||| ||||||| || |||||  ||  |||    
T  7403590 gctctttctttcccaaatctattaaattggaaccctagttttacaatatgtaatctagagtccaaaatctccaagatttcttccattaattgatgacaac 7403491  T
Q  679 gttcttccccaattc 693  Q
    ||||||| |||||||    
T  7403490 gttcttctccaattc 7403476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 585 - 713
Target Start/End: Original strand, 8421712 - 8421840
Alignment:
Q  585 tcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttctt 684  Q
    |||||| ||| |||||||||||| ||||||||||  ||||| | ||||||||| || || ||  || ||||||| | ||||||| ||||||   ||||||    
T  8421712 tcttccccaattatataaaattgaaaccctaattacacaatctataatctacattctaatatcacctaaatttcctccaataataagtggtccagttctt 8421811  T
Q  685 ccccaattcaaaaagcttcaaaccctaat 713  Q
    |||||||||||||| ||| ||||||||||    
T  8421812 ccccaattcaaaaaacttaaaaccctaat 8421840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 313 - 481
Target Start/End: Complemental strand, 23955376 - 23955209
Alignment:
Q  313 gagtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatatgt 412  Q
    ||||||||||||||||| |||| |||||||| || |||| ||  ||| ||||||  |||||||| ||||||| || ||| ||| ||||||||||| ||||    
T  23955376 gagtgaatcatcaacttcgtctctgaatttt-tatggattggccaaattcgtcccttaattatgtgaaatatcaatttaatctctgaatttgttaaatgt 23955278  T
Q  413 caatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 481  Q
    ||||||| ||||||| | | | |||  |||  |||||||| || |||||| | | ||||||||||||||    
T  23955277 caatcaagttagtcattatgttcaaacggaccgttaacggggctgacgtggcagctaacctctcacatg 23955209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 580 - 698
Target Start/End: Complemental strand, 13036309 - 13036191
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 679  Q
    ||||||||||| |||||||||||| |||||| ||| |||||| ||| ||| | ||| | | |||||| ||||||||||||| || |||||  ||  || |    
T  13036309 ctctttcttccccaaatatataaatttggaatccttattttataatttgtcacctagagttcaaaatccccaaaatttcttccattaattgatgacaaag 13036210  T
Q  680 ttcttccccaattcaaaaa 698  Q
    |||||||||||||||||||    
T  13036209 ttcttccccaattcaaaaa 13036191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 579 - 713
Target Start/End: Complemental strand, 45361062 - 45360929
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||| ||||||| |||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||| ||||  ||  ||     
T  45361062 gctctttcttccccaaatat-taaatttggaaccctaatgttataatttgttacctagagttcaaaatcccccaaatttcttacaagaattgatgtcaat 45360964  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    |||||||||||||||||||| ||| ||||||||||    
T  45360963 gttcttccccaattcaaaaaacttaaaaccctaat 45360929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 11686015 - 11685971
Alignment:
Q  24 aaattgttcaaaatacatcaaatatatgaggtatgttatttgata 68  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  11686015 aaattgctcaaaatacatcaaatatatgaggtatgttatttgata 11685971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 313 - 481
Target Start/End: Original strand, 30108565 - 30108732
Alignment:
Q  313 gagtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatatgt 412  Q
    ||||||||||||||||| |||  |||||||| || || ||||  ||  ||||||   ||||||||||||||| || ||| ||  ||||||||||| ||||    
T  30108565 gagtgaatcatcaacttcgtccctgaatttt-tacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgt 30108663  T
Q  413 caatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 481  Q
    ||||||| ||||||  ||  | |||  |||| |||||||| || |||||| ||||||||||||||||||    
T  30108664 caatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggccgttaacctctcacatg 30108732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 585 - 713
Target Start/End: Original strand, 35342722 - 35342850
Alignment:
Q  585 tcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttctt 684  Q
    |||||| ||| | |||||||||||||||||||||  ||||| | ||||||||| || || ||  || ||||||| | ||||||| ||| ||   ||||||    
T  35342722 tcttccccaattgtataaaattggaaccctaattacacaatctataatctacattctaatatcacctaaatttcctccaataataagtagtccagttctt 35342821  T
Q  685 ccccaattcaaaaagcttcaaaccctaat 713  Q
    |||||||||||||| ||| ||||||||||    
T  35342822 ccccaattcaaaaaacttaaaaccctaat 35342850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 581 - 713
Target Start/End: Original strand, 37791965 - 37792097
Alignment:
Q  581 tctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 680  Q
    |||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| || |||||||||| |   || |  ||| || ||    
T  37791965 tctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatcccaaaaatttcttccctgaacttatggcaaagt 37792064  T
Q  681 tcttccccaattcaaaaagcttcaaaccctaat 713  Q
    |||||||||||||||||| ||| ||||||||||    
T  37792065 tcttccccaattcaaaaaacttaaaaccctaat 37792097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 580 - 714
Target Start/End: Original strand, 23904917 - 23905052
Alignment:
Q  580 ctctttcttcctc-aaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    ||||||||||| | ||||||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  ||     
T  23904917 ctctttcttcccccaaatatataaatttggaaccctaatgttataatttgtcaactagagttcaaaatcccccaaatttcttccatgaattgatgtcaat 23905016  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaata 714  Q
    |||||||||||||||||||| ||| |||||||||||    
T  23905017 gttcttccccaattcaaaaaacttaaaaccctaata 23905052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 379 - 481
Target Start/End: Complemental strand, 2168860 - 2168758
Alignment:
Q  379 aaatattaaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcac 478  Q
    |||||| || |||||| |||||||||||| ||||||||||| ||||||  ||| | |||  ||||  ||||||| || |||||| |||||||||||||||    
T  2168860 aaatatcaatttagtccttgaatttgttaaatgtcaatcaagttagtccttctgttcaaacggagcattaacggggctgacgtggccgttaacctctcac 2168761  T
Q  479 atg 481  Q
    |||    
T  2168760 atg 2168758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 583 - 713
Target Start/End: Complemental strand, 6605162 - 6605032
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    |||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  || |||     
T  6605162 tttcttccccaaatatataaatttggaaccctaatgttataatttgttacctagagttcaaaatcccccaaatttcttccatgaattgatgtcaatgttt 6605063  T
Q  683 ttccccaattcaaaaagcttcaaaccctaat 713  Q
    |||||||||||||||| ||| ||||||||||    
T  6605062 ttccccaattcaaaaaacttaaaaccctaat 6605032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 579 - 713
Target Start/End: Complemental strand, 13169435 - 13169302
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||| |||||||||||| ||||| ||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  ||     
T  13169435 gctctttcttccccaaatatataaatttgga-ccctaatgttataatttgttacctagagttcaaaatcccccaaatttcttacatgaattgatgtcaat 13169337  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    |||||||||||||||||||| ||| ||||||||||    
T  13169336 gttcttccccaattcaaaaaacttaaaaccctaat 13169302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 311 - 481
Target Start/End: Original strand, 33775406 - 33775575
Alignment:
Q  311 aagagtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatat 410  Q
    ||||||||||| ||||||| |||  |||||||| || || ||||| ||  |||||||  ||||||||||||||| || ||| ||  ||||||| ||| ||    
T  33775406 aagagtgaatcgtcaacttcgtccctgaatttt-tacgggtcggtcaacttcgtccttcaattatgcgaaatatcaatttaatccctgaatttattaaat 33775504  T
Q  411 gtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 481  Q
    ||||||||| ||||||  ||| | |||  ||||  ||||||| || ||| ||||||||||||| |||||||    
T  33775505 gtcaatcaagttagtccttctgttcaaacggagcattaacggggctgacatgaccgttaacctttcacatg 33775575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 579 - 713
Target Start/End: Original strand, 39857999 - 39858133
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||| |||||||||||| | ||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  ||     
T  39857999 gctctttcttccccaaatatataaattcggaaccctaatgttataatttgttacctagagttcaaaatcccccaaatttcttacatgaattgatgtcaat 39858098  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    ||||||| |||||||||||| ||| ||||||||||    
T  39858099 gttcttcaccaattcaaaaaacttaaaaccctaat 39858133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 583 - 713
Target Start/End: Original strand, 47384608 - 47384738
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    |||||||| ||| |||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| |||||||| |||| ||  ||||  ||  || ||||    
T  47384608 tttcttccccaattatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatccccaaaatgtcttccatgaattgatgtcaaagttc 47384707  T
Q  683 ttccccaattcaaaaagcttcaaaccctaat 713  Q
    |||||||||||||||| ||| ||||||||||    
T  47384708 ttccccaattcaaaaaacttaaaaccctaat 47384738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 722 - 827
Target Start/End: Complemental strand, 48705499 - 48705396
Alignment:
Q  722 attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattat 821  Q
    |||||||||||||  || |||| ||| ||||||||||||||||| ||||||| ||||||| ||||||||  ||||||||  || ||||||||  ||||||    
T  48705499 attgaatccgaaaaccagaatctccataatttcttcaagcaaaactgttcaaattgaatccgaaatgat--ggggtgggcatatgggcaaaaagaattat 48705402  T
Q  822 gaaagt 827  Q
     |||||    
T  48705401 caaagt 48705396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 784 - 869
Target Start/End: Complemental strand, 40785164 - 40785079
Alignment:
Q  784 aaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgaga 869  Q
    |||||||| ||||||||  || ||  |||| |||||||||||||| |||||  |||| |||||||| |||||||||||||||||||    
T  40785164 aaatgatggggggtgggaatatggaaaaaaacaattatgaaagtcgagcttcttcttcaagctccaagtttaatggtgatgtgaga 40785079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 377 - 481
Target Start/End: Complemental strand, 34692776 - 34692672
Alignment:
Q  377 cgaaatattaaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctc 476  Q
    |||||||| ||| |||||  ||||||||| | ||||| |||||||| ||| |||  ||||| | |||  |||||||||| ||||||||||||||||| ||    
T  34692776 cgaaatatgaaaatagtccctgaatttgtaaaatgtccatcaattttgtccctccgtccaaattgaggattaacggtgctgacgtgaccgttaacctttc 34692677  T
Q  477 acatg 481  Q
    |||||    
T  34692676 acatg 34692672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 641 - 713
Target Start/End: Original strand, 48850929 - 48851001
Alignment:
Q  641 caaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    |||||||||||||||||||| || |||||  ||  || |||||||||||||||||||| ||| ||||||||||    
T  48850929 caaaattcccaaaatttcttccattaattgatgccaaagttcttccccaattcaaaaaacttaaaaccctaat 48851001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 580 - 635
Target Start/End: Complemental strand, 12904101 - 12904046
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatcta 635  Q
    ||||||||||  ||||| ||||||||| |||||||||||||||||| |||||||||    
T  12904101 ctctttcttctccaaatctataaaatttgaaccctaattttacaatctgtaatcta 12904046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 580 - 698
Target Start/End: Complemental strand, 48311543 - 48311427
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 679  Q
    ||||||||||| ||||||||||   |||||||| |||||||| ||| ||| | ||| | | |||||| | |||||||||||||| |||||  ||  || |    
T  48311543 ctctttcttccccaaatatatat--ttggaaccttaattttataatttgtcacctagaattcaaaatcctcaaaatttctttcattaattgatgacaaag 48311446  T
Q  680 ttcttccccaattcaaaaa 698  Q
    |||||||||||||||||||    
T  48311445 ttcttccccaattcaaaaa 48311427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 444 - 561
Target Start/End: Original strand, 3920847 - 3920964
Alignment:
Q  444 tgttaacggtgcagacgtgacc-gttaacctctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttc 542  Q
    |||||||||||| ||||||  | ||||||||||||||||  ||| ||| ||| |||| ||| ||||| |||||||| || |||| ||||| ||||||||     
T  3920847 tgttaacggtgctgacgtgggcagttaacctctcacatgtcttgtcatgtcaaatgctacacaagcacagactaatatgatcgaaagtga-caaaatttt 3920945  T
Q  543 caaggatcaaattaattga 561  Q
    ||||||| ||||| |||||    
T  3920946 caaggatgaaattgattga 3920964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 579 - 669
Target Start/End: Original strand, 3921007 - 3921096
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataatt 669  Q
    |||||||||||| | ||| |||||||||| |||| ||||| |||||| ||||||||| | | |||||| ||||||||||||| || |||||    
T  3921007 gctctttcttccccgaatctataaaattgaaacc-taattctacaatctgtaatctatagtacaaaatccccaaaatttcttccattaatt 3921096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 12904026 - 12903939
Alignment:
Q  683 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgtt 770  Q
    ||||||||||| |||| | ||||||||||||        |||||| ||||||| |||| || ||||||||||||||||||||||||||    
T  12904026 ttccccaattctaaaaacgtcaaaccctaatttgtttttattgaacccgaaatccaaagtctccaaaatttcttcaagcaaaattgtt 12903939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 583 - 713
Target Start/End: Original strand, 38549845 - 38549975
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    ||||||||  ||||||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||||||||||||| ||  ||||  |   || ||||    
T  38549845 tttcttccctaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatccccaaaatttcttccatgaattgataccaaagttc 38549944  T
Q  683 ttccccaattcaaaaagcttcaaaccctaat 713  Q
    |||||||||||||||| ||| ||| ||||||    
T  38549945 ttccccaattcaaaaaacttaaaatcctaat 38549975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 369 - 477
Target Start/End: Original strand, 4321093 - 4321201
Alignment:
Q  369 taattatgcgaaatattaaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgtt 468  Q
    |||||||||||||||| || ||| ||  ||||||||||| ||||||||||| ||||||  ||  | ||| ||||| ||| | || || |||||| |||||    
T  4321093 taattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtccttcagttcaaatggagcgttgatggggctgacgtggccgtt 4321192  T
Q  469 aacctctca 477  Q
    |||||||||    
T  4321193 aacctctca 4321201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 580 - 712
Target Start/End: Complemental strand, 22155626 - 22155495
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 679  Q
    ||||||||||| |||||||||||| |||||||| |||| ||| ||| ||| |  || | | |||||| ||| ||||||||| ||  ||||  ||  || |    
T  22155626 ctctttcttccccaaatatataaa-ttggaaccttaatgttataatttgtcacttagagttcaaaatcccccaaatttcttccatgaattgatgtcaatg 22155528  T
Q  680 ttcttccccaattcaaaaagcttcaaaccctaa 712  Q
    ||||||||||||||||||| ||| |||||||||    
T  22155527 ttcttccccaattcaaaaaacttaaaaccctaa 22155495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 580 - 712
Target Start/End: Complemental strand, 22211541 - 22211410
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 679  Q
    ||||||||||| |||||||||||| |||||||| |||| ||| ||| ||| |  || | | |||||| ||| ||||||||| ||  ||||  ||  || |    
T  22211541 ctctttcttccccaaatatataaa-ttggaaccttaatgttataatttgtcacttagagttcaaaatcccccaaatttcttccatgaattgatgtcaatg 22211443  T
Q  680 ttcttccccaattcaaaaagcttcaaaccctaa 712  Q
    ||||||||||||||||||| ||| |||||||||    
T  22211442 ttcttccccaattcaaaaaacttaaaaccctaa 22211410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 581 - 713
Target Start/End: Original strand, 38472573 - 38472705
Alignment:
Q  581 tctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 680  Q
    ||||| |||| |||||||||||| |||||||| |||| ||| ||| ||| | ||| | | |||||| |||  |||||||| ||  ||||  ||  || ||    
T  38472573 tctttattccccaaatatataaatttggaaccttaatgttataatttgtcacctagagttcaaaatcccccgaatttcttccatgaattgatgtcaatgt 38472672  T
Q  681 tcttccccaattcaaaaagcttcaaaccctaat 713  Q
    |||||||||||||||||| ||| ||||||||||    
T  38472673 tcttccccaattcaaaaaacttaaaaccctaat 38472705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 361 - 481
Target Start/End: Original strand, 46994707 - 46994827
Alignment:
Q  361 tcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacg 460  Q
    |||||||  ||||||||||||||| || ||| ||  ||||||||||| ||||||||||| ||||||  ||| | |||  |||| |||||||| |  ||||    
T  46994707 tcgtccttcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtccttctgttcaaacggagcgttaacgggggtgacg 46994806  T
Q  461 tgaccgttaacctctcacatg 481  Q
    ||  ||||||||| |||||||    
T  46994807 tggtcgttaacctttcacatg 46994827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 580 - 711
Target Start/End: Original strand, 34775362 - 34775493
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 679  Q
    |||||||||||  ||||||||||| ||||||||||||| ||| ||| ||| | ||| | | ||||||  || ||||||||| ||  ||||  ||  || |    
T  34775362 ctctttcttccctaaatatataaatttggaaccctaatgttataatttgttacctagagttcaaaatctcccaaatttcttacatgaattgatgtcaatg 34775461  T
Q  680 ttcttccccaattcaaaaagcttcaaacccta 711  Q
    ||||||||||||||| ||| ||| ||||||||    
T  34775462 ttcttccccaattcagaaaacttaaaacccta 34775493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 370 - 481
Target Start/End: Complemental strand, 36756918 - 36756807
Alignment:
Q  370 aattatgcgaaatattaaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgtta 469  Q
    ||||||| ||||||| || ||| ||  ||||||||||| ||||||||||| |||| |  ||| | |||  |||| ||||||||  | |||||| ||||||    
T  36756918 aattatgtgaaatatcaatttaatcgctgaatttgttaaatgtcaatcaagttagcccttctgttcaaacggagcgttaacgggactgacgtggccgtta 36756819  T
Q  470 acctctcacatg 481  Q
    ||||||||||||    
T  36756818 acctctcacatg 36756807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 370 - 481
Target Start/End: Complemental strand, 36766442 - 36766331
Alignment:
Q  370 aattatgcgaaatattaaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgtta 469  Q
    ||||||| ||||||| || ||| ||  ||||||||||| ||||||||||| |||| |  ||| | |||  |||| ||||||||  | |||||| ||||||    
T  36766442 aattatgtgaaatatcaatttaatcgctgaatttgttaaatgtcaatcaagttagcccttctgttcaaacggagcgttaacgggactgacgtggccgtta 36766343  T
Q  470 acctctcacatg 481  Q
    ||||||||||||    
T  36766342 acctctcacatg 36766331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 746 - 800
Target Start/End: Original strand, 8421867 - 8421921
Alignment:
Q  746 caaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtggg 800  Q
    ||||||||||| ||||||||   || || ||||||||||||||||||||||||||    
T  8421867 caaaatttcttgaagcaaaacgcttgaaattgaatctgaaatgatgaggggtggg 8421921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 357 - 426
Target Start/End: Original strand, 11682824 - 11682893
Alignment:
Q  357 aaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatatgtcaatcaatttagtc 426  Q
    ||||||||||   |||||||| |||||| ||||||||| ||||||| |||| | ||| ||||||||||||    
T  11682824 aaaatcgtccctcaattatgcaaaatatcaaattagtccttgaattcgttagacgtccatcaatttagtc 11682893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 195; Significance: 1e-105; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 311 - 713
Target Start/End: Original strand, 11031427 - 11031828
Alignment:
Q  311 aagagtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatat 410  Q
    ||||||||||||||||||   || ||||||||  ||||||| ||  |||||||| ||| ||||||||||||||| ||||||||   ||| ||||| ||||    
T  11031427 aagagtgaatcatcaactccatccttgaatttg-taaggatgggccaaaatcgttctccaattatgcgaaatatcaaattagttcctgagtttgtcatat 11031525  T
Q  411 gtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcag 510  Q
    |||||||||||||||| |||  |||||||   ||||||||| ||  || ||| |||||||||||||||||||||  |||| ||||||| |||| ||||||    
T  11031526 gtcaatcaatttagtccctccgtccaatttaggtgttaacgatgttgatgtggccgttaacctctcacatgggtctccatgtcagatgtcacataagcag 11031625  T
Q  511 agactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatttgtagaaaatgctttgctctttcttcctcaaatatataaaattggaa 610  Q
    |||||||| ||| ||| |||||||||||||||||||||  ||||| ||||||||| | |||||| |||||| |||||||| |||||||||||||||||||    
T  11031626 agactaatttggccgatagtgaccaaaatttccaaggactaaatttattgatttgcataaaatgttttgctttttcttccccaaatatataaaattggaa 11031725  T
Q  611 ccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagcttcaaaccct 710  Q
     |||||||||||||| | |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||    
T  11031726 gcctaattttacaatctataatctacactccaaaatccccaaaatttcttccaataattagtggtaacgttcttccctaattcaaaaaacttcaaaccct 11031825  T
Q  711 aat 713  Q
    |||    
T  11031826 aat 11031828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 583 - 883
Target Start/End: Original strand, 40019448 - 40019748
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||  ||||| |||||| |||||||||  ||| ||||||    
T  40019448 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacaccccaaaatctccaaattttcttccaataattaagggtcacgttc 40019547  T
Q  683 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 782  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || ||||||||    
T  40019548 ttccccaaatcaaaaaattgcaaaccctaattttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 40019647  T
Q  783 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 882  Q
     |||||||| | |||||   || ||||||||  |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  40019648 aaaatgatgggaggtggtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 40019747  T
Q  883 g 883  Q
    |    
T  40019748 g 40019748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 313 - 603
Target Start/End: Complemental strand, 9186736 - 9186447
Alignment:
Q  313 gagtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatatgt 412  Q
    ||||||||||||||||  ||| |||||||| | ||||||| |  |||||||||| | ||||||||||||||| |||||||||  | ||||||  ||||||    
T  9186736 gagtgaatcatcaactccgtccttgaattt-acaaggatcagccaaaatcgtccccaaattatgcgaaatatcaaattagtccctaaatttggcatatgt 9186638  T
Q  413 caatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcagag 512  Q
    |||||||||||||| |||  | |||||   |||||||||||   |||||| |||||||||||||||||||||  |||| ||| ||| |||| ||||||||    
T  9186637 caatcaatttagtccctccgttcaatttaggtgttaacggtaatgacgtggccgttaacctctcacatgggtctccatgtcaaatgtcacacaagcagag 9186538  T
Q  513 actaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatttgtagaaaatgctttgctctttcttcctcaaatatataaa 603  Q
    |||||| ||| ||| |||||||||||||||||| ||  ||||| ||||||||| ||||||||  |||||||||||||| ||||||||||||    
T  9186537 actaatttggccgatagtgaccaaaatttccaatgactaaattgattgatttgcagaaaatgacttgctctttcttccccaaatatataaa 9186447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 356 - 713
Target Start/End: Complemental strand, 10269580 - 10269206
Alignment:
Q  356 taaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgc 455  Q
    |||||||||  || |||||| |||||||| |||||||| | |||| |||| ||||||||| ||||||| || |||  ||||||| | |||||||||||||    
T  10269580 taaaatcgttttccaattatacgaaatatcaaattagtttctgaacttgtcatatgtcaaccaatttattccctccgtccaatttgggtgttaacggtgc 10269481  T
Q  456 agacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttccaaggatcaaatt 555  Q
     || ||| |||||||||| ||||||| ||  |||| ||||||| |||| |||||| ||||||| ||| | | ||||||||||||||  || ||  |||||    
T  10269480 tgatgtgcccgttaacctttcacatgagtctccatgtcagatgtcacacaagcagggactaatttggcc-atagtgaccaaaatttttaaagactaaatt 10269382  T
Q  556 aattgatttgtagaaaatgctttgctctttcttcctcaa------------------atatataaaattggaaccctaattttacaatatgtaatctaca 637  Q
     ||||||||| | |||||| |||||| |||||||| |||                  |||||||||||||||| |||||||||||||| |  ||||||||    
T  10269381 gattgatttgcataaaatgttttgctttttcttccccaacagctatttctttcccaaatatataaaattggaagcctaattttacaatctacaatctaca 10269282  T
Q  638 ctccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    | ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  10269281 caccaaaatccccaaaatttcttccaataattagtggtaacgttcttccccaattcaaaaaacttcaaacgctaat 10269206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 580 - 791
Target Start/End: Original strand, 25356622 - 25356834
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 679  Q
    ||||||||||| ||||||||||||| |||||| |||||| ||| |||||||||||||||||||||||  |||||||||||| ||||||| ||||||||||    
T  25356622 ctctttcttccccaaatatataaaactggaactctaattatactatatgtaatctacactccaaaatcaccaaaatttcttccaataataagtggtaacg 25356721  T
Q  680 ttcttccccaattcaaaaagcttcaaaccctaa-tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 778  Q
    ||||||||||||||||||| ||||||||||||| |        |||||||| ||||| ||||||| |||||||||||| |||||||| | || || ||||    
T  25356722 ttcttccccaattcaaaaaacttcaaaccctaatttcttttttattgaatctgaaatccaaaatccccaaaatttcttgaagcaaaactattgaaattga 25356821  T
Q  779 atctgaaatgatg 791  Q
    ||| |||||||||    
T  25356822 atcagaaatgatg 25356834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 579 - 889
Target Start/End: Original strand, 33369050 - 33369362
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||| |||||||||||||||||||||||||||  | ||| || |||||||||||||||||  |||||| ||||| ||||||| ||||||       
T  33369050 gctctttcttccccaaatatataaaattggaaccctaattacataatctgcaatctacactccaaaatcaccaaaacttcttccaataataagtggtcca 33369149  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaa--tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaattt 776  Q
    |||||||||||||||||||| |||||||||| ||  |        |||||||| ||||  ||||||  |||||| ||||| |||||||| | || || ||    
T  33369150 gttcttccccaattcaaaaaacttcaaacccgaattttttttcttattgaatctgaaagccaaaattcccaaaacttcttgaagcaaaactattgaaatt 33369249  T
Q  777 gaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttg 876  Q
    ||||||||||||||| |  |||||  || | | |||| |  ||||||||||  ||||||||||| ||||||||  ||||||||||||||||||| |||||    
T  33369250 gaatctgaaatgatgggacgtgggaatatgagaaaaaacggttatgaaagttgagctttatcttcaagctccaaatttaatggtgatgtgagagcgcttg 33369349  T
Q  877 aatgttgatgtcc 889  Q
    ||||||| |||||    
T  33369350 aatgttggtgtcc 33369362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 592 - 883
Target Start/End: Original strand, 28432520 - 28432810
Alignment:
Q  592 caaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaat 691  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||||||||||     
T  28432520 caaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttcttccccaaa 28432619  T
Q  692 tcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatg 791  Q
    |||||||  | |||||| || |        |||||||| ||||  |||||||  |||||||  ||||||||||  |||| || |||||||| ||||||||    
T  28432620 tcaaaaaattgcaaaccgtatttttttttaattgaatctgaaaaccaaaatctacaaaattcattcaagcaaatctgttgaaattgaatctaaaatgatg 28432719  T
Q  792 aggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttg 883  Q
     |||||||   || ||||||||  |  ||  ||||||||| || ||||| |  |||||||||||||||||||||||||||||||||||||||    
T  28432720 -ggggtggtcatatgggcaaaaagagctaccaaagtcaagtttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgttg 28432810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 580 - 889
Target Start/End: Complemental strand, 9876361 - 9876053
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 679  Q
    ||||||||||| ||| | |||||||||| |||||||||| |||||| || ||||||||||| | |||  | |||||||| | ||||||| ||||||   |    
T  9876361 ctctttcttccccaattgtataaaattgaaaccctaattatacaatctgcaatctacactctataatcacaaaaatttcctccaataataagtggtccag 9876262  T
Q  680 ttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaa 779  Q
    |||| |||||||||||||| ||||||||||||||        | |||||| ||||  |||||||  |||||||| || |||||||| | || || |||||    
T  9876261 ttctgccccaattcaaaaaacttcaaaccctaattttttcgtagtgaatctgaaagccaaaatcctcaaaattttttgaagcaaaactattgaaattgaa 9876162  T
Q  780 tctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaat 879  Q
    |||||||||||| ||||||||  || ||| |||| |  ||||||||||||||||| ||||| | |||||| ||||||||||  ||||||| |||||||||    
T  9876161 tctgaaatgatg-ggggtgggaatatgggaaaaaactgttatgaaagtcaagcttcatcttcaggctccaagtttaatggtattgtgagaatgcttgaat 9876063  T
Q  880 gttgatgtcc 889  Q
    |||| |||||    
T  9876062 gttggtgtcc 9876053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 579 - 869
Target Start/End: Original strand, 461467 - 461756
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||||||| | |||||||||| ||||||||||  ||||| |  |||||||||||||||||  |||||||||| | |  |||| ||||||       
T  461467 gctctttcttcctcaattgtataaaattgtaaccctaattacacaatctccaatctacactccaaaatcaccaaaatttcctcctgtaataagtggtcca 461566  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 778  Q
    |||||||||||||||||||| |||||||||||||         |||||||| |||| ||||||||  |||||||| || || ||||| | || || ||||    
T  461567 gttcttccccaattcaaaaatcttcaaaccctaactttttcgcattgaatctgaaagtcaaaatcctcaaaattt-ttgaaacaaaactattgaaattga 461665  T
Q  779 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgaga 869  Q
    ||||||||||||| || |||||  || ||| | || || ||||||||||| ||||| ||||| |||||||| |||||||||||||||||||    
T  461666 atctgaaatgatggggtgtgggaatatgggaagaaacagttatgaaagtcgagcttcatcttcaagctccaagtttaatggtgatgtgaga 461756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 583 - 869
Target Start/End: Original strand, 33158951 - 33159236
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    |||||||| ||| | |||||||||| ||||||||||  ||||| || |||||||||||||||||  |||||||||| | || |||| ||||||   ||||    
T  33158951 tttcttccccaattgtataaaattgtaaccctaattacacaatctgcaatctacactccaaaatcaccaaaatttcctccagtaataagtggttcggttc 33159050  T
Q  683 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 782  Q
    |||||||||||||||| |||||||||||||         |||||||| |||| ||||||||  |||| ||| || |||||||| | || || ||||||||    
T  33159051 ttccccaattcaaaaatcttcaaaccctaactttttcgcattgaatctgaaagtcaaaatcctcaaatttttttgaagcaaaactattgaaattgaatct 33159150  T
Q  783 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgaga 869  Q
    ||||||||  ||||||||  | | || ||||||| ||||||||||| ||||| ||||| || ||||| |||||||||||||||||||    
T  33159151 gaaatgatagggggtgggaat-atggaaaaagcagttatgaaagtcgagcttcatcttcaaactccaagtttaatggtgatgtgaga 33159236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 583 - 713
Target Start/End: Complemental strand, 9186432 - 9186302
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    |||||||| ||||||| |||||||| ||||||||||||||||| |||||||||||||||||||| ||  ||||||||| |||||||||||| ||||||||    
T  9186432 tttcttccccaaatatttaaaattgaaaccctaattttacaatctgtaatctacactccaaaatcccataaatttcttccaataattagtgataacgttc 9186333  T
Q  683 ttccccaattcaaaaagcttcaaaccctaat 713  Q
    || ||||||||||||| ||| ||||||||||    
T  9186332 ttacccaattcaaaaaactttaaaccctaat 9186302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 580 - 878
Target Start/End: Original strand, 38881691 - 38881992
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 679  Q
    ||||||||||| ||||||||||||||||||||| |||||  |||||||| ||| ||||||||||||   || ||||||||| ||||||| ||||||   |    
T  38881691 ctctttcttccccaaatatataaaattggaaccttaattacacaatatgcaatgtacactccaaaaccacccaaatttcttccaataataagtggtccag 38881790  T
Q  680 ttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaa 779  Q
    ||||||||||||||||||| ||| ||||||||||          | | ||  |||  |||||||  ||||||||||| |||||||| | || || |||||    
T  38881791 ttcttccccaattcaaaaaacttgaaaccctaattttttttttcttattctaaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaattgaa 38881890  T
Q  780 tctgaaatgatgagg-ggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg--tgagagtgcttg 876  Q
    |||||||||||| || |||| |  || ||| |||| |||||||||||||| ||||| ||||| |||||||| |||||| |||||||  ||||||||||||    
T  38881891 tctgaaatgatggggaggtgagaatatgggaaaaaacaattatgaaagtcgagcttcatcttcaagctccaagtttaacggtgatgtatgagagtgcttg 38881990  T
Q  877 aa 878  Q
    ||    
T  38881991 aa 38881992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 465 - 713
Target Start/End: Original strand, 10267957 - 10268223
Alignment:
Q  465 cgttaacctctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgattt 564  Q
    |||||| |||||| ||||||  |||| |||||||||||| |||||||||||||| |||  || |||||||| ||||||||| ||  ||||| ||||||||    
T  10267957 cgttaatctctcatatgggtctccatgtcagatgccacacaagcagagactaatttggctgatagtgaccataatttccaatgactaaattgattgattt 10268056  T
Q  565 gtagaaaatgctttgctctttcttcctcaa------------------atatataaaattggaaccctaattttacaatatgtaatctacactccaaaat 646  Q
       ||||||| |||||||||||||||||||                  ||||||| |||||||||||||||||| |||| | ||||||||||||||||||    
T  10268057 actgaaaatgttttgctctttcttcctcaacgactatttcttccccaaatatatagaattggaaccctaatttttcaatctataatctacactccaaaat 10268156  T
Q  647 tcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagcttcaaaccctaat 713  Q
     ||| ||||||||| ||||||||||| ||||| ||||||||||||  ||| | ||||||||||||||    
T  10268157 cccccaaatttcttccaataattagtagtaacattcttccccaatgtaaataacttcaaaccctaat 10268223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 583 - 813
Target Start/End: Complemental strand, 44620472 - 44620244
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    |||||||| ||||| |||||||||| ||||||||||||||||| | ||||| |||||||||||||| ||||| ||||| |||||||||||||||| ||||    
T  44620472 tttcttccccaaatgtataaaattgaaaccctaattttacaatctttaatccacactccaaaattcacaaaaattcttccaataattagtggtaatgttc 44620373  T
Q  683 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaat-tcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatc 781  Q
    || ||||||| ||| | | ||||||||||||        ||||||| | ||||   |||||| |||||||| |||||| ||||| ||||  | |||||||    
T  44620372 tt-cccaattgaaataacctcaaaccctaat-ttttttgattgaattcaaaataaaaaaatctccaaaattccttcaaacaaaactgttgtaattgaatc 44620275  T
Q  782 tgaaatgatgaggggtgggtgtaagggcaaaa 813  Q
    |||||||||| ||||||||||||  |||||||    
T  44620274 tgaaatgatg-ggggtgggtgtatcggcaaaa 44620244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 579 - 864
Target Start/End: Complemental strand, 1322115 - 1321829
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    ||||| |||||| ||| | |||||||||||||||||||||  ||||| || |||||||| || |||||  || ||||||| | ||||||| ||||||       
T  1322115 gctctgtcttccccaattgtataaaattggaaccctaattacacaatctgcaatctacattctaaaatcacctaaatttcctccaataataagtggttca 1322016  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaa-tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttg 777  Q
    |||||||||||||||||||| ||| ||||||||| |        |||||||  ||||  |||||||  ||||||||||| |||||||| | || || |||    
T  1322015 gttcttccccaattcaaaaaacttgaaaccctaatttttttcgtattgaatatgaaagccaaaatccacaaaatttcttgaagcaaaactattgaaattg 1321916  T
Q  778 aatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 864  Q
    |||||||||||| | ||||||||  || ||| ||||    ||||||||||| ||||| ||||| |||||||| ||||||||||||||    
T  1321915 aatctgaaatgaaggggggtgggaatatgggaaaaaattgttatgaaagtcgagcttcatcttcaagctccaagtttaatggtgatg 1321829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 579 - 711
Target Start/End: Original strand, 10770636 - 10770768
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||| ||||| |||||||||||| ||||||||||||||| |||||||  ||||||||||| |||||||||||||| | |||||| ||  |||    
T  10770636 gctctttcttccccaaatctataaaattggagccctaattttacaatctgtaatccgcactccaaaatccccaaaatttctttaattaattaatgacaac 10770735  T
Q  679 gttcttccccaattcaaaaagcttcaaacccta 711  Q
    ||| |||| |||||| |||| ||||||||||||    
T  10770736 gtttttcctcaattctaaaaacttcaaacccta 10770768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 392 - 576
Target Start/End: Complemental strand, 38884850 - 38884665
Alignment:
Q  392 gtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccata 491  Q
    |||||||||||||| ||||||||||||||||| |  |||  | ||||||| ||||||||||||| || |||||||||||||| ||||||| |||| |||     
T  38884850 gtctttgaatttgtcatatgtcaatcaatttaattcctccgttcaattggggtgttaacggtgctgatgtgaccgttaacctatcacatgagttgtcatg 38884751  T
Q  492 tcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattga-tttgtagaaaatgct 576  Q
    ||||||| |||| ||  ||| |||||| ||||||| | |||| |||| || ||||||| ||||| ||||| |||| ||||||||||    
T  38884750 tcagatgtcacataaatagaaactaatttggtcgataatgacaaaaaatttcaaggatgaaattgattgattttgcagaaaatgct 38884665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 580 - 685
Target Start/End: Complemental strand, 25373440 - 25373335
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 679  Q
    ||||||||||||||||||||| ||||||||||||| ||| | | |||||||||||||||||||||||  |||||||||||| ||||||| ||| |||||     
T  25373440 ctctttcttcctcaaatatatgaaattggaaccctgattgtgctatatgtaatctacactccaaaataaccaaaatttcttccaataataagtagtaaca 25373341  T
Q  680 ttcttc 685  Q
    ||||||    
T  25373340 ttcttc 25373335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 579 - 660
Target Start/End: Original strand, 25705571 - 25705652
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctt 660  Q
    |||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||  ||||||||||||    
T  25705571 gctctttcttccccaaatatataaaattggaaccctaattatactatatgtaatctacactccaaaatcaccaaaatttctt 25705652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 377 - 481
Target Start/End: Original strand, 12515147 - 12515251
Alignment:
Q  377 cgaaatattaaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctc 476  Q
    |||||||||||| |||||| ||||||||| | |||||||||||||||||| |||  | ||||||||||||||||||||| |||||| ||||||| |||||    
T  12515147 cgaaatattaaaatagtctctgaatttgtaaaatgtcaatcaatttagtccctccgttcaattggagtgttaacggtgctgacgtggccgttaagctctc 12515246  T
Q  477 acatg 481  Q
    |||||    
T  12515247 acatg 12515251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 579 - 834
Target Start/End: Original strand, 42895061 - 42895317
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||| ||| | ||||| |||||||||||||||  ||||| || ||| ||||||| |||||  ||||||| |||| |||| || | ||||       
T  42895061 gctctttcttccccaattgtataacattggaaccctaattacacaatctgcaatttacactctaaaatcaccaaaatatcttccaattataaatggtcca 42895160  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaa-tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttg 777  Q
    |||||||||||||||||||| ||||||||||||| |        |||||||  ||||  |||||||  ||||||||||| |||||||| | || || |||    
T  42895161 gttcttccccaattcaaaaaacttcaaaccctaatttttttcgtattgaatttgaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaattg 42895260  T
Q  778 aatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctt 834  Q
    |||||||||||||| ||||||||  || ||| |||| || | ||||||||| |||||    
T  42895261 aatctgaaatgatggggggtgggaatatgggaaaaaacagtcatgaaagtcgagctt 42895317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 583 - 713
Target Start/End: Original strand, 15684048 - 15684178
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    |||||||| ||||| |||||||||||||||| ||||||||||| ||||||||| | | ||||||||| |||||||||| || |||||  ||  |||||||    
T  15684048 tttcttccccaaatctataaaattggaaccccaattttacaatctgtaatctagagttcaaaattccaaaaatttcttccattaattgatgacaacgttc 15684147  T
Q  683 ttccccaattcaaaaagcttcaaaccctaat 713  Q
    ||||||||||| ||||  |||||| ||||||    
T  15684148 ttccccaattctaaaaatttcaaaacctaat 15684178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 580 - 686
Target Start/End: Complemental strand, 25402610 - 25402504
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 679  Q
    ||||||||||| |||||||||||||||| |||||| ||| ||| || ||||||||||||||||||||  |||||||||||| ||||||| ||| |||||     
T  25402610 ctctttcttccccaaatatataaaattgaaaccctgattgtactatctgtaatctacactccaaaataaccaaaatttcttccaataataagtagtaaca 25402511  T
Q  680 ttcttcc 686  Q
    |||||||    
T  25402510 ttcttcc 25402504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 580 - 686
Target Start/End: Complemental strand, 25707119 - 25707013
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 679  Q
    ||||||||||| |||||||||||||||| |||||| ||| ||| || ||||||||||||||||||||  |||||||||||| ||||||| ||| |||||     
T  25707119 ctctttcttccccaaatatataaaattgaaaccctgattgtactatctgtaatctacactccaaaataaccaaaatttcttccaataataagtagtaaca 25707020  T
Q  680 ttcttcc 686  Q
    |||||||    
T  25707019 ttcttcc 25707013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 608 - 713
Target Start/End: Original strand, 12515395 - 12515499
Alignment:
Q  608 gaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagcttcaaac 707  Q
    ||||| |||||||||||| | |||||||||||||||||| ||||||||||| |||  ||||||| | |||||||||||||| ||||||||| ||||||||    
T  12515395 gaaccgtaattttacaatctttaatctacactccaaaatccccaaaatttc-ttccctaattagcgataacgttcttccccgattcaaaaaacttcaaac 12515493  T
Q  708 cctaat 713  Q
    ||||||    
T  12515494 cctaat 12515499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 579 - 698
Target Start/End: Original strand, 11719746 - 11719865
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||| ||||| |||||||||||||||| ||||||||||| | | | ||| | |||||||| ||||||||||||| || |||||  ||  |||    
T  11719746 gctctttcttccccaaatctataaaattggaaccccaattttacaatttatcacctagagtccaaaatccccaaaatttcttccattaattgatgacaac 11719845  T
Q  679 gttcttccccaattcaaaaa 698  Q
    ||||||||||||||||||||    
T  11719846 gttcttccccaattcaaaaa 11719865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 579 - 646
Target Start/End: Original strand, 25370798 - 25370865
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaat 646  Q
    |||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  25370798 gctctttcttccccaaatatataaaattggaaccctaattatactatatgtaatctacactccaaaat 25370865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 746 - 889
Target Start/End: Original strand, 33748793 - 33748935
Alignment:
Q  746 caaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagc 845  Q
    ||||||||||| |||||||| | || || ||||||||||||||||| ||||||||  || ||  |||| |  |||||||||||||| || ||||| ||||    
T  33748793 caaaatttcttgaagcaaaactattgaaattgaatctgaaatgatgtggggtgggaatatggaaaaaa-cggttatgaaagtcaagtttcatcttcaagc 33748891  T
Q  846 tccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 889  Q
    |||| ||||||| ||| ||||||||||||||||||||| |||||    
T  33748892 tccaagtttaatagtgttgtgagagtgcttgaatgttggtgtcc 33748935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 580 - 713
Target Start/End: Original strand, 17807313 - 17807446
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 679  Q
    ||||||||||| |||||||||||| ||||||||||||||||| ||| ||| | ||| | | |||||| ||||||| ||||| || |||||  ||  |||     
T  17807313 ctctttcttccacaaatatataaatttggaaccctaattttataatttgtcacctagagttcaaaatccccaaaaattcttccattaattgatgacaaca 17807412  T
Q  680 ttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    ||||||||||||||||||| ||||||| ||||||    
T  17807413 ttcttccccaattcaaaaaacttcaaaacctaat 17807446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 579 - 889
Target Start/End: Complemental strand, 31823276 - 31822975
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||| ||| | |||||||||||||||||||||  ||||| || ||||||||||| | |||    |||||||| |  |||||||||||||       
T  31823276 gctctttcttccccaattgtataaaattggaaccctaattacacaatctgcaatctacactctataatcatgaaaatttcctcaaataattagtggttca 31823177  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaa--tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaattt 776  Q
    ||||| |||||||||||||| |||||||||||||  |        | ||||||  |||  |||||||  ||||||||||| |||||||| | || || ||    
T  31823176 gttctgccccaattcaaaaaacttcaaaccctaattttttttcgtagtgaatctaaaagccaaaatcctcaaaatttcttgaagcaaaactattgaa-tt 31823078  T
Q  777 gaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttg 876  Q
    ||||||||||||||| ||||||||  || ||| |||| |  ||||||||          ||||| || ||||| ||||||||||| ||||||||||||||    
T  31823077 gaatctgaaatgatgtggggtgggaatatgggaaaaaacggttatgaaa----------atcttcaaactccaagtttaatggtgttgtgagagtgcttg 31822988  T
Q  877 aatgttgatgtcc 889  Q
    ||||||| |||||    
T  31822987 aatgttggtgtcc 31822975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 582 - 713
Target Start/End: Complemental strand, 11790627 - 11790496
Alignment:
Q  582 ctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgtt 681  Q
    ||||||||||||||| ||||||| ||||||| | |||||||||| ||| ||||| | |||||||| ||||||||||||| || |||||  ||  ||| ||    
T  11790627 ctttcttcctcaaatctataaaaatggaaccttgattttacaatttgttatctatagtccaaaatccccaaaatttcttccattaattgatgacaacctt 11790528  T
Q  682 cttccccaattcaaaaagcttcaaaccctaat 713  Q
    |||||| ||||| |||| ||||||| ||||||    
T  11790527 cttcccaaattctaaaaacttcaaaacctaat 11790496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 579 - 713
Target Start/End: Complemental strand, 32824072 - 32823938
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||| ||| | | |||||||||||||||||||  ||||| || ||||||||||  |||||  || ||||||| | ||||||| ||||||       
T  32824072 gctctttcttccccaattgtttaaaattggaaccctaattacacaatctgcaatctacactataaaatcgcctaaatttcctccaataataagtggttca 32823973  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    ||| |||||||||||||||| ||||||||||||||    
T  32823972 gtttttccccaattcaaaaaacttcaaaccctaat 32823938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 722 - 867
Target Start/End: Complemental strand, 25371781 - 25371636
Alignment:
Q  722 attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattat 821  Q
    |||||||| ||||| |||||||   ||||||| ||  ||||||| | || || ||||||| ||||||||||||||||||  || ||| |||| || ||||    
T  25371781 attgaatctgaaatccaaaatccaaaaaatttattgcagcaaaactattgaaattgaatccgaaatgatgaggggtgggcatatgggaaaaaacagttat 25371682  T
Q  822 gaaagtcaagctttatctttaagctccatgtttaatggtgatgtga 867  Q
    ||| ||| ||||| ||||| |||||||| |||||||||||||||||    
T  25371681 gaatgtcgagcttcatcttcaagctccaagtttaatggtgatgtga 25371636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 312 - 548
Target Start/End: Complemental strand, 44620761 - 44620526
Alignment:
Q  312 agagtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatatg 411  Q
    |||||||||||||||||| |||  |||||||   ||| |||||| |||||||||| | |||| ||| |||||| || || |||  ||||||||| | |||    
T  44620761 agagtgaatcatcaacttcgtccctgaatttgc-aagcatcggtcaaaatcgtccccaaattttgcaaaatatcaatttcgtccctgaatttgtaaaatg 44620663  T
Q  412 tcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcaga 511  Q
     |||||||||| |||  || |   || |||||||||||||| || |||||| |||||||||||||||||||  |||||| ||||| |||| | |||||      
T  44620662 acaatcaatttcgtccttccaattaactggagtgttaacggagctgacgtggccgttaacctctcacatggactgccatgtcagacgccatataagcatg 44620563  T
Q  512 gactaatgtggtcgacagtgaccaaaatttccaagga 548  Q
    ||||||| ||| |||  || ||||| |||| ||||||    
T  44620562 gactaatatggccgattgtaaccaacattttcaagga 44620526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 310 - 481
Target Start/End: Original strand, 33368756 - 33368926
Alignment:
Q  310 aaagagtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctct-aattatgcgaaatattaaattagtctttgaatttgttat 408  Q
    ||||||||||||||||| || ||||||||||||| || | ||||||  || || || ||| ||||||||||||||| || ||| || ||||||||||||     
T  33368756 aaagagtgaatcatcaaattcgtctttgaatttt-tacgaatcggtcgaattcatc-tctcaattatgcgaaatatcaatttaatccttgaatttgttaa 33368853  T
Q  409 atgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 481  Q
    ||||||||||| ||||||  ||| | |||   |||  |||| ||||| |||||| ||||||||||||||||||    
T  33368854 atgtcaatcaagttagtccttctgttcaaccagagcattaatggtgctgacgtggccgttaacctctcacatg 33368926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 313 - 481
Target Start/End: Original strand, 40019156 - 40019323
Alignment:
Q  313 gagtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatatgt 412  Q
    ||||||||||||||||| ||||||||||||| || || ||||  ||  ||||||   ||||||||||||||| || ||| ||  ||||||||||| ||||    
T  40019156 gagtgaatcatcaacttcgtctttgaatttt-tacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgt 40019254  T
Q  413 caatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 481  Q
    ||||||| ||||||  ||  | |||  |||| |||||||| || | |||| ||||||||||||||||||    
T  40019255 caatcaagttagtccttcagttcaaacggagcgttaacggggctgtcgtggccgttaacctctcacatg 40019323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 579 - 698
Target Start/End: Original strand, 24527184 - 24527303
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    ||||| |||||| ||| | |||||||||||||||||||||  ||||| || |||||||| || |||||  || ||||||| | ||||||| ||||||       
T  24527184 gctctatcttccccaattgtataaaattggaaccctaattacacaatctgcaatctacattctaaaatcacctaaatttcctccaataataagtggtcca 24527283  T
Q  679 gttcttccccaattcaaaaa 698  Q
    ||||||||||||||||||||    
T  24527284 gttcttccccaattcaaaaa 24527303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 579 - 697
Target Start/End: Original strand, 37525149 - 37525267
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    ||||||| |||| ||| | |||||||||| ||||||||||  ||||| |  |||||||||||||||||  |||||||||| | || |||| ||||||       
T  37525149 gctctttattccccaattgtataaaattgtaaccctaattgcacaatcttcaatctacactccaaaatcaccaaaatttcctccactaataagtggttca 37525248  T
Q  679 gttcttccccaattcaaaa 697  Q
    |||||||||||||||||||    
T  37525249 gttcttccccaattcaaaa 37525267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 579 - 713
Target Start/End: Original strand, 41041032 - 41041166
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  ||     
T  41041032 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatgtcaat 41041131  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    |||||||||||||||||| | ||| ||||||||||    
T  41041132 gttcttccccaattcaaataacttaaaaccctaat 41041166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 580 - 713
Target Start/End: Original strand, 13484831 - 13484964
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 679  Q
    ||||||||||| |||||||||||| |||||||| |||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  || |    
T  13484831 ctctttcttccccaaatatataaatttggaaccttaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatgtcaatg 13484930  T
Q  680 ttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    ||||||||||||||||||| ||| ||||||||||    
T  13484931 ttcttccccaattcaaaaaacttaaaaccctaat 13484964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 784 - 869
Target Start/End: Original strand, 37525333 - 37525418
Alignment:
Q  784 aaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgaga 869  Q
    |||||||| ||||||||  || ||| |||| || ||||||||||| ||||| ||||| |||||||| |||||||||||||||||||    
T  37525333 aaatgatggggggtgggaatatgggaaaaaacagttatgaaagtcgagcttcatcttcaagctccaagtttaatggtgatgtgaga 37525418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 312 - 481
Target Start/End: Original strand, 42894775 - 42894943
Alignment:
Q  312 agagtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatatg 411  Q
    |||| |||||||||||||||||||||||||||  | || |||   ||| ||||||  |||||||||||||||| || ||| ||  ||||||||||| |||    
T  42894775 agagcgaatcatcaactttgtctttgaattttc-acgggtcgaccaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttgttaaatg 42894873  T
Q  412 tcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 481  Q
    |||||||| ||||||  ||| |  || ||||| |||||||   |  ||||| ||||||||||||||||||    
T  42894874 tcaatcaagttagtccttctgtttaaatggagcgttaacgagactaacgtggccgttaacctctcacatg 42894943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 679 - 791
Target Start/End: Complemental strand, 8655752 - 8655640
Alignment:
Q  679 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 778  Q
    |||||||||||||||||||| ||| ||||||||||        |||||||| ||||  |||||||  ||||||||||| |||||||| | || || ||||    
T  8655752 gttcttccccaattcaaaaaacttgaaaccctaattttttcgtattgaatctgaaagccaaaatccacaaaatttcttgaagcaaaactattgaaattga 8655653  T
Q  779 atctgaaatgatg 791  Q
    |||||||||||||    
T  8655652 atctgaaatgatg 8655640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 370 - 481
Target Start/End: Original strand, 33158712 - 33158823
Alignment:
Q  370 aattatgcgaaatattaaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgtta 469  Q
    ||||||||||||||| || ||| || |||||||||||| |||||||| || ||||||  ||| | |||  | || |||||||| || |||||| ||||||    
T  33158712 aattatgcgaaatatcaatttaatccttgaatttgttaaatgtcaattaagttagtccttctgttcaaaggaagcgttaacggggctgacgtggccgtta 33158811  T
Q  470 acctctcacatg 481  Q
    ||||||||||||    
T  33158812 acctctcacatg 33158823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 312 - 481
Target Start/End: Original strand, 37524857 - 37525025
Alignment:
Q  312 agagtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatatg 411  Q
    |||||||||| ||| ||| ||| ||||||||| || || ||||| ||| || |||  |||||||| ||||||| ||  || ||| ||||||||||| |||    
T  37524857 agagtgaatcctcaccttcgtccttgaatttt-tacgggtcggtcaaattcatcccttaattatgtgaaatatcaatctaatctctgaatttgttaaatg 37524955  T
Q  412 tcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 481  Q
    |||||||| ||||||  ||| | |||  ||||  |||| ||  | |||||||||||||||||||||||||    
T  37524956 tcaatcaagttagtccttctgttcaaacggagcattaatgggactgacgtgaccgttaacctctcacatg 37525025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 580 - 713
Target Start/End: Original strand, 41824261 - 41824394
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 679  Q
    ||||||||||| |||||||||| | ||| ||||||||| ||| ||| ||| |  || | | |||||| ||||||||||||| ||  ||||  ||  || |    
T  41824261 ctctttcttccccaaatatatatatttgaaaccctaatgttataatttgtcacgtagagttcaaaatccccaaaatttcttccatgaattgatgtcaaag 41824360  T
Q  680 ttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    ||||||||||||||||||| ||| ||||||||||    
T  41824361 ttcttccccaattcaaaaaacttaaaaccctaat 41824394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 585 - 713
Target Start/End: Original strand, 31199781 - 31199909
Alignment:
Q  585 tcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttctt 684  Q
    |||||| ||| | |||||||||||||||||||||  ||||| | ||||||||| || || ||  || ||||||| | ||||||| ||||||   ||||||    
T  31199781 tcttccccaattgtataaaattggaaccctaattacacaatctataatctacattctaatatcacctaaatttcctccaataataagtggtccagttctt 31199880  T
Q  685 ccccaattcaaaaagcttcaaaccctaat 713  Q
    || |||||||| || ||| ||||||||||    
T  31199881 cctcaattcaacaaacttaaaaccctaat 31199909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 313 - 481
Target Start/End: Complemental strand, 32824362 - 32824195
Alignment:
Q  313 gagtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatatgt 412  Q
    |||||||||||||||||||| | ||||||||  | || ||||  ||| | ||||   ||||||||||||||| || ||| ||  ||||||||||| ||||    
T  32824362 gagtgaatcatcaactttgtttctgaattttc-acgggtcggccaaattagtccctcaattatgcgaaatatcaatttaatcactgaatttgttaaatgt 32824264  T
Q  413 caatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 481  Q
    ||||||| |||| |  ||| | |||  |||| |||||||| |  |||||||||| ||||||||||||||    
T  32824263 caatcaagttagcccttctgttcaaacggagcgttaacggggttgacgtgaccgctaacctctcacatg 32824195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 445 - 517
Target Start/End: Complemental strand, 37803621 - 37803549
Alignment:
Q  445 gttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcagagactaa 517  Q
    ||||||||||  |||||| | |||||| ||||| |||||||||||| |||||||||||| |||||| ||||||    
T  37803621 gttaacggtgatgacgtggctgttaacatctcatatgggttgccatgtcagatgccacataagcagggactaa 37803549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 370 - 481
Target Start/End: Complemental strand, 1322349 - 1322238
Alignment:
Q  370 aattatgcgaaatattaaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgtta 469  Q
    |||||||| |||||| || ||| ||  ||||||||||| || |||||||| ||||||| ||| | |||  |||| |||||||| || ||||||  |||||    
T  1322349 aattatgcaaaatatcaatttaatccctgaatttgttaaatatcaatcaagttagtcattctgttcaaacggagcgttaacggggctgacgtggtcgtta 1322250  T
Q  470 acctctcacatg 481  Q
    ||||||||||||    
T  1322249 acctctcacatg 1322238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 370 - 481
Target Start/End: Original strand, 24526952 - 24527063
Alignment:
Q  370 aattatgcgaaatattaaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgtta 469  Q
    ||||||| ||||||| || ||| ||  ||||||||||| ||||||||||| ||||||  ||| | |||  |||| |||||||| ||   |||||||||||    
T  24526952 aattatgtgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtccttctgttcaaacggagcgttaacggggctatcgtgaccgtta 24527051  T
Q  470 acctctcacatg 481  Q
    ||||||||||||    
T  24527052 acctctcacatg 24527063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 370 - 481
Target Start/End: Complemental strand, 31823511 - 31823400
Alignment:
Q  370 aattatgcgaaatattaaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgtta 469  Q
    ||||||||||||||| || ||| ||  | ||||||||| ||||||||||| ||||||  | | | |||  |||| |||||||| || |||||| ||||||    
T  31823511 aattatgcgaaatatcaatttaatccctaaatttgttaaatgtcaatcaagttagtccttatgttcaaacggagcgttaacggggctgacgtggccgtta 31823412  T
Q  470 acctctcacatg 481  Q
    ||||||||||||    
T  31823411 acctctcacatg 31823400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 598 - 713
Target Start/End: Original strand, 33748644 - 33748759
Alignment:
Q  598 tataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaa 697  Q
    ||||||||||||||| |||||  ||||| || ||||||||||| | |||    |||||||| | ||||||| ||||||   ||||| |||||||||||||    
T  33748644 tataaaattggaaccttaattacacaatctgcaatctacactctataatcatgaaaatttcctccaataataagtggttcagttctgccccaattcaaaa 33748743  T
Q  698 agcttcaaaccctaat 713  Q
    |  |||||||||||||    
T  33748744 aaattcaaaccctaat 33748759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 836 - 889
Target Start/End: Original strand, 11719994 - 11720047
Alignment:
Q  836 atctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 889  Q
    ||||| |||||| ||| ||||||||||||||||||| ||||||||||| |||||    
T  11719994 atcttcaagctctatgcttaatggtgatgtgagagtacttgaatgttggtgtcc 11720047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 580 - 713
Target Start/End: Complemental strand, 22273668 - 22273535
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 679  Q
    ||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | ||||||  || ||||||||| ||  ||||  ||  || |    
T  22273668 ctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatctcccaaatttcttccatgaattgatgtcaatg 22273569  T
Q  680 ttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    |||||||||||||||| || ||| ||| ||||||    
T  22273568 ttcttccccaattcaagaaacttaaaatcctaat 22273535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 411 - 516
Target Start/End: Complemental strand, 44528167 - 44528062
Alignment:
Q  411 gtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcag 510  Q
    ||||||||| |||||| ||   |||| |||| | ||||||||||  |||||| | |||||| ||||| |||||||| ||| |||||||||||| ||||||    
T  44528167 gtcaatcaaattagtccctacgtccatttggggcgttaacggtgatgacgtggctgttaacatctcatatgggttgtcatgtcagatgccacataagcag 44528068  T
Q  511 agacta 516  Q
     |||||    
T  44528067 ggacta 44528062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 397 - 481
Target Start/End: Original strand, 461259 - 461343
Alignment:
Q  397 tgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 481  Q
    ||||||||||| ||||||||||| ||||||  | | | |||  ||||||||||||| || ||| | |||||||||||||||||||    
T  461259 tgaatttgttaaatgtcaatcaagttagtccttttgttcaaacggagtgttaacggggctgacatcaccgttaacctctcacatg 461343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 581 - 713
Target Start/End: Complemental strand, 29694095 - 29693963
Alignment:
Q  581 tctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 680  Q
    |||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| | ||| ||||||| ||  ||||  ||  || ||    
T  29694095 tctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatccgcaagatttcttccatgaattgatgacaaagt 29693996  T
Q  681 tcttccccaattcaaaaagcttcaaaccctaat 713  Q
    ||||| |||||| ||||| ||| ||||||||||    
T  29693995 tcttctccaatttaaaaaacttaaaaccctaat 29693963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 312 - 387
Target Start/End: Original strand, 10267837 - 10267911
Alignment:
Q  312 agagtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatattaa 387  Q
    ||||| |||||||||| |  || ||||||||| || | |||||| ||||||||||| |||||||||||||||||||    
T  10267837 agagttaatcatcaacctcatccttgaatttt-tacgaatcggtcaaaatcgtcctttaattatgcgaaatattaa 10267911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 466 - 573
Target Start/End: Original strand, 15683899 - 15684005
Alignment:
Q  466 gttaacctctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatttg 565  Q
    ||||||||||| || || ||||||| ||||||| |||| ||||||||| |||| | || || ||||| ||||||| ||||||   ||||| |||||||||    
T  15683899 gttaacctctcccaaggcttgccatgtcagatgtcacacaagcagagattaattttgtagaaagtga-caaaattgccaagggcgaaattgattgatttg 15683997  T
Q  566 tagaaaat 573  Q
     |||||||    
T  15683998 aagaaaat 15684005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 817 - 864
Target Start/End: Complemental strand, 32823863 - 32823816
Alignment:
Q  817 attatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 864  Q
    |||||||||||| ||||||||||| ||||| || ||||||||||||||    
T  32823863 attatgaaagtcgagctttatcttcaagcttcaagtttaatggtgatg 32823816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 836 - 889
Target Start/End: Complemental strand, 11790370 - 11790317
Alignment:
Q  836 atctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 889  Q
    ||||| |||||| || || ||||||||||||||||| ||||||||||| |||||    
T  11790370 atcttcaagctctatcttgaatggtgatgtgagagtacttgaatgttggtgtcc 11790317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 157; Significance: 5e-83; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 157; E-Value: 5e-83
Query Start/End: Original strand, 377 - 801
Target Start/End: Original strand, 30501180 - 30501610
Alignment:
Q  377 cgaaatattaaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctc 476  Q
    |||||||| ||| |||| | ||||||||| | |||||||||||||||||| |||  ||||||||||||||||||||||| ||||||||||| || |||||    
T  30501180 cgaaatatcaaaatagtttctgaatttgtaaaatgtcaatcaatttagtccctccgtccaattggagtgttaacggtgctgacgtgaccgtcaatctctc 30501279  T
Q  477 acatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatttgtagaaaatg-- 574  Q
    |||||          |||||||||||| ||||| |||||||| |||  || |||||||||||||||||||||  ||||| ||||||||| ||||||||      
T  30501280 acatg----------tcagatgccacacaagcaaagactaatttggctgatagtgaccaaaatttccaaggacgaaattgattgatttgcagaaaatgtt 30501369  T
Q  575 ctttgctc---------------tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttct 659  Q
    |||| |||               |||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  30501370 ctttcctccccaacggctctatctttcttcctccaatatataaaattggaaccctaattttacaatctttaatctacactccaaaattcccaaaatttct 30501469  T
Q  660 ttcaataattagtggtaacgttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaa 759  Q
    ||||||||||||||||||||| ||||||||||||||||| |  |||||||| ||        ||||||||||||| ||| | || | |||||||||||||    
T  30501470 ttcaataattagtggtaacgtacttccccaattcaaaaaaccccaaaccct-atttttttttattgaatccgaaaatcagattccctaaaatttcttcaa 30501568  T
Q  760 gcaaaattgttcaatttgaatctgaaatgatgaggggtgggt 801  Q
    |||||| ||||||| |||||||||||||||||  ||||||||    
T  30501569 gcaaaactgttcaaattgaatctgaaatgatggtgggtgggt 30501610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 579 - 887
Target Start/End: Original strand, 26448037 - 26448342
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||| | ||||| |||||||||  || |||||||||| |||||||||||||||||    
T  26448037 gctctttcatcctcaaatatataaaattggaaccttaattttacaatattttatctatactccaaaa-ccctaaaatttcttccaataattagtggtaac 26448135  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 778  Q
    || ||| | ||||||||||| ||||||||||||||        ||||||||  |||  || |||  ||||||||||||||||||||| ||||||| ||||    
T  26448136 gtcctttctcaattcaaaaaacttcaaaccctaat-tttttttattgaatctaaaaaccagaatacccaaaatttcttcaagcaaaactgttcaaattga 26448234  T
Q  779 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaa 878  Q
    |||||||||||||| |||||||  || ||||| ||  | |||| |||||||||||| | ||| ||||||||| ||||||||||||||||||||| |||||    
T  26448235 atctgaaatgatga-gggtgggcatatgggcacaaagagttatcaaagtcaagcttcaccttcaagctccatctttaatggtgatgtgagagtgtttgaa 26448333  T
Q  879 tgttgatgt 887  Q
    |||||||||    
T  26448334 tgttgatgt 26448342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 125; E-Value: 7e-64
Query Start/End: Original strand, 422 - 787
Target Start/End: Complemental strand, 40963352 - 40962981
Alignment:
Q  422 tagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcagagactaatgtg 521  Q
    ||||| ||| |||||||||||||||||||||||| |||||| |||||||||||||| |||         || |||||||||| ||  || | ||||| ||    
T  40963352 tagtccctccatccaattggagtgttaacggtgctgacgtggccgttaacctctcatatg---------at-agatgccacataaagagtggctaatttg 40963263  T
Q  522 gtcgacagtgaccaaaatttccaaggatcaaattaattgatttgtagaaaatg--ctttgctc---------------tttcttcctcaaatatataaaa 604  Q
    | ||| ||| |||||||||||||| ||| ||||| ||||||||| ||||||||  |||| |||               |||||||| |||||||||||||    
T  40963262 gccgatagtaaccaaaatttccaaagatgaaattgattgatttgcagaaaatgttctttcctccccaacggctctttatttcttccccaaatatataaaa 40963163  T
Q  605 ttggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagcttca 704  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||    
T  40963162 ttggaaccctaattttacaatctttaatctacactccaaaattcccaaaatttcttacaataattagtggtaacgttcttccccaattcaaaaaaattca 40963063  T
Q  705 aaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaat 787  Q
    |||||||||        ||||||||||||   || ||||  |||||||||||||||||||||||||||| |||||||||||||    
T  40963062 aaccctaat-tttttttattgaatccgaataccagaatccacaaaatttcttcaagcaaaattgttcaaattgaatctgaaat 40962981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 581 - 889
Target Start/End: Complemental strand, 1847462 - 1847154
Alignment:
Q  581 tctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 680  Q
    |||||||||| ||||| |||||||||||||||||||||  ||||| ||||||||||||| ||||||  |||||||||| | ||||||  | ||||   ||    
T  1847462 tctttcttccccaaatgtataaaattggaaccctaattacacaatttgtaatctacacttcaaaatcaccaaaatttcatccaataaaaaatggttcagt 1847363  T
Q  681 tcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaat 780  Q
    |||||||||||| ||||| || |||||||||||        |||||||  ||||  |||||||  ||||||||||| |||||||| | || |  ||||||    
T  1847362 tcttccccaatttaaaaaactacaaaccctaattttttcgtattgaatttgaaagccaaaatcctcaaaatttcttgaagcaaaactattgatattgaat 1847263  T
Q  781 ctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatg 880  Q
    ||||||||||| ||||||||  || ||| |||| || ||||||||||| ||||| ||||| |||||||| |||||||||||||||||||| |||||||||    
T  1847262 ctgaaatgatggggggtgggaatatgggaaaaaacagttatgaaagtcgagcttcatcttcaagctccaagtttaatggtgatgtgagagagcttgaatg 1847163  T
Q  881 ttgatgtcc 889  Q
    ||| |||||    
T  1847162 ttggtgtcc 1847154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 583 - 883
Target Start/End: Complemental strand, 41945898 - 41945600
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    |||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||  | ||| |||||| |||||||||  ||| ||||||    
T  41945898 tttcttccccaaatatataaaattggaaccctaattttacgatgtgtaatctacactccaaaatctctaaattttcttccaataattaagggtcacgttc 41945799  T
Q  683 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 782  Q
    |||||||| |||||||  | |||| ||||||        |||||||| ||||  |||||||  ||||| || ||||||||||| |||| || ||||||||    
T  41945798 ttccccaaatcaaaaaattgcaaatcctaat-ttttttaattgaatctgaaaaccaaaatctgcaaaa-ttattcaagcaaaactgttgaaattgaatct 41945701  T
Q  783 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 882  Q
     |||||| | |||||||   || ||||||||  |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  41945700 aaaatgaaggggggtggtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 41945601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 581 - 877
Target Start/End: Original strand, 32842721 - 32843017
Alignment:
Q  581 tctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 680  Q
    |||||||||||||||| ||||||||||||||||||||||| |||| | ||||||||| |||||||||||||||||||||| || |||||| ||  |||||    
T  32842721 tctttcttcctcaaatctataaaattggaaccctaatttttcaatctctaatctacaatccaaaattcccaaaatttcttccattaattaatgacaacgt 32842820  T
Q  681 tcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaat 780  Q
    ||||||  | ||| |||| ||||||||||||||        |||||||| ||||| ||||||| ||||||    ||||||||||||||||||  ||||||    
T  32842821 tcttccttacttctaaaaacttcaaaccctaatttgttttgattgaatctgaaatccaaaatccccaaaaaaaattcaagcaaaattgttcagattgaat 32842920  T
Q  781 ctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttga 877  Q
      ||||||||| | |||||| ||| |||||| |  | || | |||||| ||||| ||||| || ||  ||||||||||||||||| ||| |||||||    
T  32842921 gcgaaatgatgggtggtgggcgtatgggcaacacaagttctcaaagtcgagcttcatcttcaaactttatgtttaatggtgatgtcagaatgcttga 32843017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 587 - 813
Target Start/End: Original strand, 49494787 - 49495011
Alignment:
Q  587 ttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttcc 686  Q
    |||| ||||| ||||||||||||||||||||||||||||   ||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  49494787 ttccccaaatgtataaaattggaaccctaattttacaatcattaatccacactccaaaattcccaaaaattcttccaataattagtggtaacgttcttcc 49494886  T
Q  687 ccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaat-tcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaa 785  Q
    |||||||||| | | ||||||||||||        ||||||||||||||   |||||| | |||||| |||||| ||||| ||||  | |||||||||||    
T  49494887 ccaattcaaataacctcaaaccctaat--tttttgattgaatccgaaataaaaaaatcccgaaaattccttcaaacaaaactgttataattgaatctgaa 49494984  T
Q  786 atgatgaggggtgggtgtaagggcaaaa 813  Q
    |||||| |||||||||||| ||||||||    
T  49494985 atgatg-ggggtgggtgtatgggcaaaa 49495011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 579 - 880
Target Start/End: Complemental strand, 48635173 - 48634872
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||| ||| | ||||| |||||||||||||||  ||||| |  ||| ||||||| |||||  | ||||| || | |||| || | ||||       
T  48635173 gctctttcttccccaattgtataacattggaaccctaattacacaatctacaatttacactctaaaatcactaaaatatcctccaattataaatggtcca 48635074  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 778  Q
    |||||||||||||||||||| ||||||||||||||        |||||||  |||| ||||||||  ||||||||||| |||||||| | || || ||||    
T  48635073 gttcttccccaattcaaaaaacttcaaaccctaattttttcgtattgaatttgaaagtcaaaatcctcaaaatttcttaaagcaaaactattgaaattga 48634974  T
Q  779 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaa 878  Q
    ||||||||||||| ||||||||  || ||  |||| || ||||||||||| ||||| |||||  ||||||| ||||||||||| ||||||||||||||||    
T  48634973 atctgaaatgatggggggtgggaatatggaaaaaaacagttatgaaagtcgagcttcatcttcgagctccaagtttaatggtgttgtgagagtgcttgaa 48634874  T
Q  879 tg 880  Q
    ||    
T  48634873 tg 48634872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 579 - 868
Target Start/End: Original strand, 24382004 - 24382293
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||| ||| | |||||| ||| ||||||||||  ||||| |  |||||||||||||||||  |||||||||| |||| |||| |||| |       
T  24382004 gctctttcttccccaattgtataaagttgtaaccctaattacacaatcttcaatctacactccaaaatcaccaaaatttccttcagtaataagtgatcca 24382103  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 778  Q
    |||||||||||||| ||||| ||||||||||||||        |||||||| |||| ||||||||  ||| |||| || |||||||| | || || ||||    
T  24382104 gttcttccccaattaaaaaatcttcaaaccctaattttttcgcattgaatctgaaagtcaaaatcctcaagattttttgaagcaaaactattgaaattga 24382203  T
Q  779 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgag 868  Q
    ||||||||||||| ||||||||  || ||  |||| |  ||||||||||  | ||| ||||| |||||||| || |||||||||||||||    
T  24382204 atctgaaatgatggggggtgggaatatggaaaaaaactgttatgaaagtttaacttcatcttgaagctccaagtataatggtgatgtgag 24382293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 583 - 698
Target Start/End: Original strand, 37865676 - 37865791
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| ||||||  ||||||||  ||| ||||||    
T  37865676 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttctaataattaagggtcacgttc 37865775  T
Q  683 ttccccaattcaaaaa 698  Q
    |||||||| |||||||    
T  37865776 ttccccaaatcaaaaa 37865791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 397 - 563
Target Start/End: Complemental strand, 5127455 - 5127289
Alignment:
Q  397 tgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcaga 496  Q
    ||||||||| |||| |||||||| ||||||  |   |||| |||| | ||||||||||  |||||| ||||||||||||||||||||||||||| |||||    
T  5127455 tgaatttgtcatatctcaatcaaattagtccttacgtccatttggggcgttaacggtgatgacgtggccgttaacctctcacatgggttgccatgtcaga 5127356  T
Q  497 tgccacagaagcagagactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatt 563  Q
    ||||||| |||||| ||||||  |||| || |||||| ||||||||||||||  ||||| |||||||    
T  5127355 tgccacataagcagggactaaattggttgatagtgacaaaaatttccaaggacaaaattgattgatt 5127289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 598 - 860
Target Start/End: Original strand, 31885827 - 31886088
Alignment:
Q  598 tataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaa 697  Q
    |||||||||||||| ||||||  ||||| || ||||||||||| |||||  |||||||||| | ||||||| ||||||   |||||||||||||| ||||    
T  31885827 tataaaattggaactctaattacacaatctgcaatctacactctaaaatcaccaaaatttcctccaataataagtggttcagttcttccccaattgaaaa 31885926  T
Q  698 agcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggt 797  Q
    | ||||||||||||||        |||||||  ||||  |||||||  ||||||||||| |||||| | | || || |||||||| |||||| | |||||    
T  31885927 aacttcaaaccctaattttttcgtattgaatttgaaagccaaaatcctcaaaatttcttgaagcaagactattgaaattgaatctaaaatgacg-ggggt 31886025  T
Q  798 gggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggt 860  Q
    |||  || ||| |||| || ||||||||||| ||||| ||||| ||| |||| ||||||||||    
T  31886026 gggaatatgggaaaaaacagttatgaaagtcgagcttcatcttcaagatccaagtttaatggt 31886088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 579 - 713
Target Start/End: Original strand, 2975749 - 2975883
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||| ||||||||||||||||||||  |||||  ||||| |  | |||||||||||||||  |||||||||||| ||||||| || |||       
T  2975749 gctctttcttccccaaatatataaaattggaactttaattacacaatcttcattctacactccaaaatcaccaaaatttcttccaataataagcggtcca 2975848  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    |||||||||||||||||||| ||||||||||||||    
T  2975849 gttcttccccaattcaaaaaacttcaaaccctaat 2975883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 445 - 563
Target Start/End: Complemental strand, 5134662 - 5134544
Alignment:
Q  445 gttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttcca 544  Q
    ||||||||||  |||||| ||||||||||||||||||||||||||| |||||||||||| |||||| ||||||  |||| || |||||| ||||||||||    
T  5134662 gttaacggtgatgacgtggccgttaacctctcacatgggttgccatgtcagatgccacataagcagggactaaattggttgatagtgacaaaaatttcca 5134563  T
Q  545 aggatcaaattaattgatt 563  Q
    ||||  ||||| |||||||    
T  5134562 aggacaaaattgattgatt 5134544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 583 - 692
Target Start/End: Complemental strand, 33051253 - 33051144
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    |||||||| ||||| |||||||| |||||| ||||| |||||||| ||||| ||||||||||||| ||||||  |||| ||||||||||||||||| |||    
T  33051253 tttcttccccaaatgtataaaataggaaccataattatacaatatttaatccacactccaaaatttccaaaaaatcttccaataattagtggtaacattc 33051154  T
Q  683 ttccccaatt 692  Q
    ||||||||||    
T  33051153 ttccccaatt 33051144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 681 - 889
Target Start/End: Original strand, 33112233 - 33112441
Alignment:
Q  681 tcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaat 780  Q
    |||||||||||||||||| |||||||||||||         |||||||  |||  ||||||||   |||||||||| |||||||| | || || ||| ||    
T  33112233 tcttccccaattcaaaaaacttcaaaccctaac-tttttgcattgaatttgaatgtcaaaatccttaaaatttcttgaagcaaaactattgaaattggat 33112331  T
Q  781 ctgaaatgatgagggg-tgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaat 879  Q
    ||||||||||| |||| ||||  || ||| |||| || ||||||||||| ||||| ||||| || ||||| |||||||||||||||||||||||||||||    
T  33112332 ctgaaatgatgggggggtgggaatatgggaaaaaacagttatgaaagtcgagcttcatcttcaaactccaagtttaatggtgatgtgagagtgcttgaat 33112431  T
Q  880 gttgatgtcc 889  Q
    |||| |||||    
T  33112432 gttggtgtcc 33112441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 755 - 883
Target Start/End: Original strand, 37886239 - 37886367
Alignment:
Q  755 ttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgttt 854  Q
    ||||||||||| |||| || |||||||| ||||||||||||||||   || ||||||||  |  ||| |||||||||||| ||||| |  ||||||||||    
T  37886239 ttcaagcaaaactgttgaaattgaatctaaaatgatgaggggtggtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgttt 37886338  T
Q  855 aatggtgatgtgagagtgcttgaatgttg 883  Q
    |||||||||||||||||||||||||||||    
T  37886339 aatggtgatgtgagagtgcttgaatgttg 37886367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 679 - 883
Target Start/End: Complemental strand, 23775353 - 23775149
Alignment:
Q  679 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 778  Q
    ||||||||||| |||||||| ||||||||||||||        ||| |||  ||||  |||||||  ||||||||||| |||||||| | || || ||||    
T  23775353 gttcttccccacttcaaaaaacttcaaaccctaattttttcgtatttaatttgaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaattga 23775254  T
Q  779 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaa 878  Q
    ||||||||||||| ||| ||||  || ||| |||| || ||||||||||| ||||| |||||  ||||| | ||| ||||||| ||||||||||||||||    
T  23775253 atctgaaatgatgggggatgggaatatgggaaaaaacagttatgaaagtcgagcttcatcttcgagctctaagttcaatggtgttgtgagagtgcttgaa 23775154  T
Q  879 tgttg 883  Q
    |||||    
T  23775153 tgttg 23775149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 579 - 889
Target Start/End: Original strand, 35861831 - 35862141
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatt-tctttcaataattagtggtaa 677  Q
    |||||||||||| ||||| |||||||||| |||||||||| || ||| ||||||||| | |||||||| ||||||| | |||| |  |||||  ||  ||    
T  35861831 gctctttcttccccaaatctataaaattgaaaccctaattataaaatttgtaatctatagtccaaaatccccaaaaatatcttcctttaattgatgacaa 35861930  T
Q  678 cgttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaa-atcaccaaaatttcttcaagcaaaattgttcaattt 776  Q
    | |||||||||| || ||||| |||| || |||| |        ||||||||||||||||||| ||| |||||||| |||||||      ||||||  ||    
T  35861931 cattcttccccatttaaaaaa-cttctaaacctatt-tttttttattgaatccgaaattcaaagatccccaaaattccttcaagttttggtgttcaggtt 35862028  T
Q  777 gaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttg 876  Q
    ||||||||||||||| | |||||  ||| |||||||| ||||||| |||||  |  || ||||| |||||| |||||||||||||||||||||||| |||    
T  35862029 gaatctgaaatgatgggtggtggacgtatgggcaaaaacaattatcaaagttgattttcatcttcaagctctatgtttaatggtgatgtgagagtgtttg 35862128  T
Q  877 aatgttgatgtcc 889  Q
    | ||||| |||||    
T  35862129 agtgttggtgtcc 35862141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 397 - 563
Target Start/End: Complemental strand, 41625359 - 41625193
Alignment:
Q  397 tgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcaga 496  Q
    ||||||||| |||| |||||||| |||||| ||  ||||| |||| ||||||| ||||  ||| ||  |||||||||||||||||||||||||| |||||    
T  41625359 tgaatttgtcatatctcaatcaaattagtccctacatccatttggggtgttaatggtgatgacatggtcgttaacctctcacatgggttgccatgtcaga 41625260  T
Q  497 tgccacagaagcagagactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatt 563  Q
    ||||||| |||||| ||||||  |||| || |||||| |||| || ||||||  ||||| |||||||    
T  41625259 tgccacataagcagggactaaattggttgatagtgacaaaaaatttcaaggacgaaattgattgatt 41625193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 737 - 889
Target Start/End: Original strand, 45897487 - 45897640
Alignment:
Q  737 caaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaag-caattatgaaagtcaagcttt 835  Q
    |||||||  ||||||||||| |||||||| | || || |||||| |||||||||| ||||||||  || ||| ||||  |  |||| ||||||||||||     
T  45897487 caaaatcctcaaaatttcttgaagcaaaactattgaaattgaatatgaaatgatgtggggtgggaatatgggaaaaaaacggttataaaagtcaagcttc 45897586  T
Q  836 atctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 889  Q
    ||||| |||||||| ||||||||||| ||||||||||||||||||||| |||||    
T  45897587 atcttcaagctccaagtttaatggtgttgtgagagtgcttgaatgttggtgtcc 45897640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 751 - 889
Target Start/End: Original strand, 2975887 - 2976024
Alignment:
Q  751 tttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccat 850  Q
    |||||| |||||||| | || || |||||||||||||||| |||||||||  || ||| |||| || |||| |||||| ||||| ||||| ||| ||||     
T  2975887 tttcttgaagcaaaactattgaaattgaatctgaaatgataaggggtgggaatatgggaaaaa-cagttatcaaagtcgagcttcatcttcaagttccaa 2975985  T
Q  851 gtttaatggtgatgtgagagtgcttgaatgttgatgtcc 889  Q
    ||||||||||||||||||| ||||||||||||| |||||    
T  2975986 gtttaatggtgatgtgagattgcttgaatgttgttgtcc 2976024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 579 - 864
Target Start/End: Original strand, 18429030 - 18429314
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    ||||| |||||| ||| | |||||||||| ||||||||||  ||||| || |||||| | || |||||  || ||||||| |  |||||| ||||||       
T  18429030 gctctgtcttccccaattgtataaaattgaaaccctaattacacaatctgcaatctatattctaaaatcacctaaatttcctctaataataagtggtcca 18429129  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 778  Q
    |||||||||||||||||||| ||| |||||| |||        |||||||| |||| ||||||||  ||||||||||| |||||||| | || || ||||    
T  18429130 gttcttccccaattcaaaaaacttgaaacccgaatttttttgtattgaatctgaaagtcaaaatctacaaaatttcttgaagcaaaactattgaaattga 18429229  T
Q  779 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 864  Q
    || ||||||||   |||||| |  |||||| ||||    ||||||||||| ||||| ||||| |||||||| |||||| |||||||    
T  18429230 atttgaaatga-acggggtgagaataagggaaaaaattgttatgaaagtcgagcttcatcttcaagctccaagtttaacggtgatg 18429314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 370 - 481
Target Start/End: Original strand, 33851038 - 33851149
Alignment:
Q  370 aattatgcgaaatattaaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgtta 469  Q
    |||||| |||||||| || ||| ||| ||||||||||| ||||||||||| ||||||| ||| | |||  |||| |||||||| || |||||||||||||    
T  33851038 aattatccgaaatatcaatttaatctctgaatttgttaaatgtcaatcaagttagtcattctgttcaaacggagcgttaacggggctgacgtgaccgtta 33851137  T
Q  470 acctctcacatg 481  Q
    ||||||||||||    
T  33851138 acctctcacatg 33851149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 579 - 864
Target Start/End: Original strand, 45255773 - 45256058
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    ||||| |||||| ||| | ||||||||| |||||||||||  ||||| || |||||||| || |||||  || ||||||| | ||||||| ||||||       
T  45255773 gctctgtcttccccaattgtataaaatttgaaccctaattacacaatctgcaatctacattctaaaatcacctaaatttcctccaataataagtggtcca 45255872  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 778  Q
    |||||||||||||||||||| ||| ||||||||||        |||||||| ||||  |||||||  ||||||||||| || ||||| | || || ||||    
T  45255873 gttcttccccaattcaaaaaacttgaaaccctaat-ttttcgtattgaatctgaaagccaaaatccacaaaatttcttgaaacaaaactattgaaattga 45255971  T
Q  779 atctgaaatgatgaggggtgggtgtaagggcaaaagca--attatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 864  Q
    ||||||||||| | |||||| |  || ||| ||||  |   ||||||||||| ||||| || || |||||||| ||||||||||||||    
T  45255972 atctgaaatgaag-ggggtgagaatatgggaaaaaaaattgttatgaaagtcgagcttcattttcaagctccaagtttaatggtgatg 45256058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 598 - 864
Target Start/End: Original strand, 33851291 - 33851555
Alignment:
Q  598 tataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaa 697  Q
    ||||||||||||||| |||||  ||||| || |||||||| || |||||  || ||||||| | ||||||| ||||||   |||||||||||||||||||    
T  33851291 tataaaattggaacc-taattacacaatctgcaatctacattctaaaatcacctaaatttcctccaataataagtggtccagttcttccccaattcaaaa 33851389  T
Q  698 agcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggt 797  Q
    |  || ||||||||||        |||||||| ||||  |||||||  ||||||||||| ||| |||| | || || ||||||||||||||| | |||||    
T  33851390 aatttgaaaccctaatttttttgtattgaatctgaaagccaaaatccacaaaatttcttgaagaaaaactattgaaattgaatctgaaatgaaggggggt 33851489  T
Q  798 gggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 864  Q
     ||  |  ||| ||||    ||||||||||| ||||| ||||| |||||||| ||||||||||||||    
T  33851490 -ggaatctgggaaaaaattgttatgaaagtcgagcttcatcttcaagctccaagtttaatggtgatg 33851555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 313 - 481
Target Start/End: Original strand, 33111841 - 33112008
Alignment:
Q  313 gagtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatatgt 412  Q
    ||||||||||||||||| |||  ||||||||  | || ||||| ||| || |||   ||||||||||||||| || ||| ||  ||||||||||| ||||    
T  33111841 gagtgaatcatcaacttcgtccctgaattttc-acggctcggtcaaattcatccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgt 33111939  T
Q  413 caatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 481  Q
    ||||||| ||||||  ||||| |||  |||| ||||| || || |||||||||||||||||||||||||    
T  33111940 caatcaagttagtccttctattcaaacggagcgttaatggagctgacgtgaccgttaacctctcacatg 33112008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 313 - 481
Target Start/End: Complemental strand, 48635464 - 48635297
Alignment:
Q  313 gagtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatatgt 412  Q
    |||||||||||||| || |||  ||||||||  | |||||||| ||| ||||||  |||||||||||||||| || ||| ||  ||||||||||| ||||    
T  48635464 gagtgaatcatcaatttcgtccctgaattttc-acggatcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttgttaaatgt 48635366  T
Q  413 caatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 481  Q
    |||| || ||||||  ||| | |||  |||| |||||||| || |||||| ||||||||||||||||||    
T  48635365 caattaagttagtctttctgttcaaacggagcgttaacggggctgacgtggccgttaacctctcacatg 48635297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 310 - 481
Target Start/End: Original strand, 23887195 - 23887365
Alignment:
Q  310 aaagagtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttata 409  Q
    |||||||||||||||||||| ||| ||||||||| || || |||| |||  ||||||   ||||||||||||||| || ||| ||  ||||||||||  |    
T  23887195 aaagagtgaatcatcaacttcgtccttgaatttt-tatgggtcggctaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttcaa 23887293  T
Q  410 tgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 481  Q
    |||||||||| ||||||  ||| | |||  |||| |||||||| || |||||| |||||||||| |||||||    
T  23887294 tgtcaatcaagttagtccttctgttcaaacggagcgttaacggggctgacgtggccgttaacctttcacatg 23887365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 378 - 481
Target Start/End: Original strand, 26447818 - 26447921
Alignment:
Q  378 gaaatattaaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctca 477  Q
    ||||||| ||| |||||| ||||||||| | |||||||||||||||||| ||| || ||||||||||||||| ||||| ||||||   |||||||| |||    
T  26447818 gaaatatcaaaatagtctctgaatttgtaaaatgtcaatcaatttagtctctccattcaattggagtgttaatggtgctgacgtggttgttaacctttca 26447917  T
Q  478 catg 481  Q
    ||||    
T  26447918 catg 26447921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 466 - 563
Target Start/End: Complemental strand, 17260752 - 17260655
Alignment:
Q  466 gttaacctctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatt 563  Q
    ||||||||||||||||| ||| ||| |||||||||||| ||| || ||||||| ||||| | |||||||||||||| ||||||  ||||| |||||||    
T  17260752 gttaacctctcacatggattgtcatgtcagatgccacataagtagggactaatttggtcaatagtgaccaaaattttcaaggacgaaattgattgatt 17260655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 313 - 481
Target Start/End: Original strand, 40508493 - 40508660
Alignment:
Q  313 gagtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatatgt 412  Q
    ||||||||||||||||| |||  ||||||||  | || ||||  ||| ||||||  |||||||||||||| | || ||| ||  ||||||||||| ||||    
T  40508493 gagtgaatcatcaacttcgtccctgaattttc-acgggtcggacaaattcgtcccttaattatgcgaaatctcaatttaatccctgaatttgttaaatgt 40508591  T
Q  413 caatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 481  Q
    ||||||| ||||||  ||||| |||   ||| |||||||| || |||||| ||||||||||||||||||    
T  40508592 caatcaagttagtccttctattcaaacagagcgttaacggggctgacgtggccgttaacctctcacatg 40508660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 311 - 481
Target Start/End: Original strand, 18428747 - 18428914
Alignment:
Q  311 aagagtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatat 410  Q
    ||||| ||||||||||||| |||  |||||||| || || ||||| ||  ||||||   ||||||||||||||| || ||| |||  |||||||||| ||    
T  18428747 aagagggaatcatcaacttcgtccctgaatttt-tacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatctc-gaatttgttaaat 18428844  T
Q  411 gtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 481  Q
    ||||||||| ||||||| | | || ||  |||| |||||||| || |||||||||||||||||||||||||    
T  18428845 gtcaatcaagttagtcattgt-tcaaaacggagcgttaacggggctgacgtgaccgttaacctctcacatg 18428914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 580 - 713
Target Start/End: Complemental strand, 2378709 - 2378576
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 679  Q
    ||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  || |    
T  2378709 ctctttcttccccaaatatataaatttggaaccctaatattataatttgttacctagagttcaaaatcccccaaatttcttacatgaattgatgtcaatg 2378610  T
Q  680 ttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    |||||||| |||||||||| ||| ||||||||||    
T  2378609 ttcttccctaattcaaaaaacttaaaaccctaat 2378576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 580 - 713
Target Start/End: Complemental strand, 42282268 - 42282135
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 679  Q
    |||||||||||  ||||||||||| ||||||||||||| ||| ||| ||| |  || | | |||||| ||||||||||||| ||  ||||  ||  || |    
T  42282268 ctctttcttccctaaatatataaatttggaaccctaatgttataatttgtcacatagaattcaaaatccccaaaatttcttccatgaattgatgccaaag 42282169  T
Q  680 ttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    ||||||||||||||||||| ||| ||||||||||    
T  42282168 ttcttccccaattcaaaaaacttaaaaccctaat 42282135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 464 - 548
Target Start/End: Complemental strand, 54094104 - 54094020
Alignment:
Q  464 ccgttaacctctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttccaagga 548  Q
    |||||||||||||||||| |||||||| |||||||||||| ||||| |||||||   | |||| |||||| |||||||| |||||    
T  54094104 ccgttaacctctcacatgagttgccatgtcagatgccacataagcatagactaaatcgatcgatagtgacaaaaatttcaaagga 54094020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 598 - 805
Target Start/End: Complemental strand, 10380719 - 10380511
Alignment:
Q  598 tataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaa 697  Q
    ||||| |||| ||||||||||  ||||| |||||| ||||||  |||||  ||||||| || | |||| || | ||||   |||||||||||||||||||    
T  10380719 tataacattgaaaccctaattacacaatctgtaatttacactttaaaatctccaaaatatcctccaattataaatggtccagttcttccccaattcaaaa 10380620  T
Q  698 agcttcaaaccctaa-tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgagggg 796  Q
    | ||||||||||||| |        |||||||  ||||  |||||||  ||||||||||| |||||||| | || || |||||||| |||| ||| ||||    
T  10380619 atcttcaaaccctaatttttttcatattgaatttgaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaattgaatctaaaatcatgggggg 10380520  T
Q  797 tgggtgtaa 805  Q
    |||||||||    
T  10380519 tgggtgtaa 10380511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 370 - 481
Target Start/End: Original strand, 37865440 - 37865551
Alignment:
Q  370 aattatgcgaaatattaaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgtta 469  Q
    ||||||||||||||| || ||| ||  ||||||||||| ||||||||||| ||||||  ||  | |||  |||| |||||||| || |||||| ||||||    
T  37865440 aattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtctttcagttcaaacggagcgttaacggggctgacgtggccgtta 37865539  T
Q  470 acctctcacatg 481  Q
    ||||||||||||    
T  37865540 acctctcacatg 37865551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 579 - 713
Target Start/End: Complemental strand, 610984 - 610850
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||| |||||||||||  |||||||| |||| ||| ||| ||| | | | | | || ||| ||||||||||||||||  ||||  ||  ||     
T  610984 gctctttcttccccaaatatataattttggaaccttaatgttataatttgtcaccaagagttcacaatccccaaaatttctttcatgaattgatgccaaa 610885  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    |||||||||||||||||||| ||| ||||||||||    
T  610884 gttcttccccaattcaaaaaacttaaaaccctaat 610850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 393 - 576
Target Start/End: Original strand, 7589353 - 7589540
Alignment:
Q  393 tctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatat 492  Q
    ||||| ||||||  |||||||||| ||||||||| |||  |  ||||||  |||||| ||||  || |||  |||||| || | |||||||||| ||| |    
T  7589353 tctttaaatttgccatatgtcaattaatttagtccctccgtttaattgggatgttaaaggtgttgatgtggtcgttaatcttttacatgggttgtcatgt 7589452  T
Q  493 cagatgccacaga----agcagagactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatttgtagaaaatgct 576  Q
    ||||||||||| |    ||||| ||||||| ||||||| | ||| |||||||||||| ||  ||||| ||||||||| ||||||||||    
T  7589453 cagatgccacatatataagcagggactaatttggtcgataatgatcaaaatttccaatgacaaaattgattgatttgcagaaaatgct 7589540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 583 - 713
Target Start/End: Complemental strand, 51686143 - 51686013
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    |||||||| |||||||||||| ||  ||||||||| ||| ||| ||| | ||| | | |||||| ||||||||||||| ||  ||||  ||  || ||||    
T  51686143 tttcttccccaaatatataaatttctaaccctaatgttataatttgtcacctagagttcaaaatccccaaaatttcttccatgaattgatgccaaagttc 51686044  T
Q  683 ttccccaattcaaaaagcttcaaaccctaat 713  Q
    |||||||||||||||| ||| ||||||||||    
T  51686043 ttccccaattcaaaaaacttaaaaccctaat 51686013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 580 - 713
Target Start/End: Complemental strand, 17516741 - 17516608
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 679  Q
    ||||||||||| |||||||||||| ||||||| ||||| ||| ||| ||||| ||| | | |||||| | | ||||||||| ||  ||||  ||  || |    
T  17516741 ctctttcttccccaaatatataaatttggaactctaatgttataatttgtaacctagagttcaaaatcctccaaatttcttccatgaattgatgtcaatg 17516642  T
Q  680 ttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    |||||||| |||||||||| ||| ||||||||||    
T  17516641 ttcttccctaattcaaaaaacttaaaaccctaat 17516608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 580 - 713
Target Start/End: Complemental strand, 21350390 - 21350257
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 679  Q
    ||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | |  ||||| ||| ||||||||| ||  ||||  ||  || |    
T  21350390 ctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagtttaaaatcccccaaatttcttccatgaattgatgtcaatg 21350291  T
Q  680 ttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    | ||||||||||||||||| ||| ||||||||||    
T  21350290 tacttccccaattcaaaaaacttaaaaccctaat 21350257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 580 - 713
Target Start/End: Original strand, 30598658 - 30598791
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 679  Q
    |||||||| || |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | ||||||  || ||||||||| ||  ||||  ||  || |    
T  30598658 ctctttctaccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatctcccaaatttcttccatgaattgatgtcaatg 30598757  T
Q  680 ttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    ||||||||||||||||||| ||| ||||||||||    
T  30598758 ttcttccccaattcaaaaaacttaaaaccctaat 30598791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 377 - 561
Target Start/End: Original strand, 32842493 - 32842677
Alignment:
Q  377 cgaaatattaaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgt-gaccgttaacctct 475  Q
    ||||||||| |||||||| || ||||||| | |||||||||||||||||| ||   || | |||| ||||||||||||| ||||| | |||||||   ||    
T  32842493 cgaaatatttaattagtccttaaatttgtcaaatgtcaatcaatttagtcccttcgtcaagttggggtgttaacggtgctgacgtgggccgttaagtact 32842592  T
Q  476 cacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattga 561  Q
    ||||||| ||||||| ||| | || ||| || ||| ||||||| ||  ||| ||||| |||||||| ||||||  || ||||||||    
T  32842593 cacatggcttgccatgtcataagcgacacaaacagggactaatatgaccgaaagtga-caaaattttcaaggaagaatttaattga 32842677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 377 - 481
Target Start/End: Complemental strand, 41946127 - 41946023
Alignment:
Q  377 cgaaatattaaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctc 476  Q
    |||||||| ||| |||||  ||||||||| | |||||  ||||||| ||| |||  ||||| ||||| ||||||||||| ||||||  ||||||||||||    
T  41946127 cgaaatatcaaaatagtccatgaatttgtaaaatgtccgtcaattttgtccctccgtccaaatggagggttaacggtgctgacgtggtcgttaacctctc 41946028  T
Q  477 acatg 481  Q
    |||||    
T  41946027 acatg 41946023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 579 - 711
Target Start/End: Original strand, 44268301 - 44268432
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | | | | | |||||| ||| ||||||||| ||  ||||| ||  ||     
T  44268301 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacccagagttcaaaatcccccaaatttcttccatgaattaatgtcaat 44268400  T
Q  679 gttcttccccaattcaaaaagcttcaaacccta 711  Q
    |||||| ||||||||||||| ||| ||||||||    
T  44268401 gttctttcccaattcaaaaaactt-aaacccta 44268432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 836 - 882
Target Start/End: Complemental strand, 13466655 - 13466609
Alignment:
Q  836 atctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 882  Q
    ||||| |||||| ||||||||||||||||||||||| ||||||||||    
T  13466655 atcttgaagctctatgtttaatggtgatgtgagagtacttgaatgtt 13466609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 579 - 713
Target Start/End: Original strand, 23887489 - 23887622
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||| ||| | |||||||||| || |||||||  ||||| || ||||||||||| | |||    |||||||| | ||||||| ||||||       
T  23887489 gctctttcttcc-caattgtataaaattgaaatcctaattacacaatctgcaatctacactctataatcatgaaaatttcctccaataataagtggttga 23887587  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    ||||| ||||||||||||||  |||||||||||||    
T  23887588 gttctgccccaattcaaaaaatttcaaaccctaat 23887622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 579 - 713
Target Start/End: Original strand, 27897512 - 27897646
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||  ||||||||| ||  ||||  ||  ||     
T  27897512 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgttacctagagttcaaaatccctcaaatttcttacatgaattgatgtcaat 27897611  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    |||||||||||||| ||||| ||| ||||| ||||    
T  27897612 gttcttccccaattaaaaaaacttaaaaccataat 27897646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 580 - 705
Target Start/End: Original strand, 45897342 - 45897467
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 679  Q
    ||||||||||| ||| | ||||||||| |||||||||||  |||||||| ||||||||||| | |||    |||||||| | ||||||| |||| |   |    
T  45897342 ctctttcttccccaattgtataaaattagaaccctaattacacaatatgcaatctacactctataatcatgaaaatttcctccaataataagtgcttcag 45897441  T
Q  680 ttcttccccaattcaaaaagcttcaa 705  Q
    |||| | |||||||||||| ||||||    
T  45897442 ttctgctccaattcaaaaaacttcaa 45897467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 370 - 405
Target Start/End: Complemental strand, 51454318 - 51454283
Alignment:
Q  370 aattatgcgaaatattaaattagtctttgaatttgt 405  Q
    ||||||||||||||| ||||||||||||||||||||    
T  51454318 aattatgcgaaatatcaaattagtctttgaatttgt 51454283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 579 - 713
Target Start/End: Original strand, 23291889 - 23292023
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||   ||||||||||| ||||||||||||| ||| |||  || ||||| | | ||||||  || ||||||||| ||  |||||  |  ||     
T  23291889 gctctttcttctataaatatataaatttggaaccctaatgttataattcgtcatctagagttcaaaatctcccaaatttcttccatgaattaacgtcaat 23291988  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    |||||||||||||||||||  ||| ||||||||||    
T  23291989 gttcttccccaattcaaaagacttaaaaccctaat 23292023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 836 - 889
Target Start/End: Original strand, 22218719 - 22218772
Alignment:
Q  836 atctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 889  Q
    ||||| ||| || |||| |||||||||||||||||| ||||||||||| |||||    
T  22218719 atcttcaagttctatgtctaatggtgatgtgagagtacttgaatgttggtgtcc 22218772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 369 - 426
Target Start/End: Original strand, 31885573 - 31885630
Alignment:
Q  369 taattatgcgaaatattaaattagtctttgaatttgttatatgtcaatcaatttagtc 426  Q
    |||||||||||||||| || |||||  ||||||||| || ||||||||||| ||||||    
T  31885573 taattatgcgaaatatcaatttagtacttgaatttgctaaatgtcaatcaagttagtc 31885630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 439 - 548
Target Start/End: Original strand, 49494602 - 49494711
Alignment:
Q  439 tggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaa 538  Q
    |||||||||| ||| || || ||| ||||||||||||||||| |  |||||| ||| | |||||| |||||| ||||||| ||| |||  || ||||| |    
T  49494602 tggagtgttagcggagctgatgtggccgttaacctctcacattgactgccatgtcaaacgccacacaagcagggactaatatggccgattgtaaccaaca 49494701  T
Q  539 tttccaagga 548  Q
    ||| ||||||    
T  49494702 ttttcaagga 49494711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 138; Significance: 1e-71; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 312 - 708
Target Start/End: Complemental strand, 24498159 - 24497749
Alignment:
Q  312 agagtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatatg 411  Q
    |||||||||||| ||||| |||  |||||||   |||||||||| |||||| |||   |||||||||| | || |||||||||  ||||||||| |||||    
T  24498159 agagtgaatcattaacttcgtccgtgaatttgc-aaggatcggtcaaaatcatccctcaattatgcgataaatcaaattagtccctgaatttgtcatatg 24498061  T
Q  412 tcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcaga 511  Q
    ||||||||||||||| |||| ||||||| ||||||||||  ||| |   |||||||||| ||| |||||||||  |||| | |||||||||| |||||||    
T  24498060 tcaatcaatttagtccctctgtccaatttgagtgttaacattgctg---tgaccgttaatctcacacatgggtctccatgttagatgccacataagcaga 24497964  T
Q  512 gactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatttgtagaaaatgctttgctctttcttcctcaa----------------- 594  Q
    ||||||| ||| ||| ||||| |||||||| |||||| |||||| ||||||||| | |||||| ||||||||||||||| |||                     
T  24497963 gactaatttggccgatagtgatcaaaatttacaaggaccaaattgattgatttgcataaaatgttttgctctttcttccccaatggctatttcttcccta 24497864  T
Q  595 -atatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattc 693  Q
     ||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| | || |||||||||||||||||||    
T  24497863 aatatataaaattgaaactctaattttacaataagtaatctacactccaaaattcccaaaatttcttccaataatcaatgataacgttcttccccaattc 24497764  T
Q  694 aaaaagcttcaaacc 708  Q
    ||||| |||||||||    
T  24497763 aaaaaccttcaaacc 24497749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 579 - 713
Target Start/End: Complemental strand, 1344612 - 1344478
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||| | ||||||||||||||||||  |||||||||||| |||||||| ||||||||    
T  1344612 gctctttcttccctaaatatataaaattggaaccctaattttacaatctttaatctacactccaaaatctccaaaatttcttccaataattggtggtaac 1344513  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    |||||||||||||||||||| ||||||||||||||    
T  1344512 gttcttccccaattcaaaaaacttcaaaccctaat 1344478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 583 - 883
Target Start/End: Original strand, 42619581 - 42619875
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    |||||||| ||||| |||||||||||||||||||||||||||| | ||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  42619581 tttcttccccaaatgtataaaattggaaccctaattttacaatgtttaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 42619680  T
Q  683 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 782  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || ||||||||    
T  42619681 ttccccaaatcaaaaaattgcaaaccctaattttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 42619780  T
Q  783 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 882  Q
     |||||||| |||||||   || |||    |||   ||  |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  42619781 aaaatgatggggggtggtcatatggg---gagc---taccaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 42619874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 579 - 889
Target Start/End: Original strand, 18726853 - 18727164
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||| ||| | |||||||||||||||||||||  ||||| |||||||||||||| | |||    |||||||  | ||||||| ||||||       
T  18726853 gctctttcttccccaattgtataaaattggaaccctaattacacaatctgtaatctacactctataatcatgaaaattttctccaataataagtggttca 18726952  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnn-attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttg 777  Q
    ||||| |||||||||||||| ||||||||||||||         | ||||||  |||  |||||||  ||||||||||| |||||| | | || || |||    
T  18726953 gttctgccccaattcaaaaaacttcaaaccctaatttttttcgtagtgaatctcaaagccaaaatcctcaaaatttcttgaagcaagactattgaaattg 18727052  T
Q  778 aatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttga 877  Q
    |||||||||||||| ||||||||  ||  || |||| |  |||||||||| |||||| ||||| |||||||| ||||||||||| |||||||||||||||    
T  18727053 aatctgaaatgatgtggggtgggaatataggaaaaaacggttatgaaagtaaagcttcatcttcaagctccaagtttaatggtgttgtgagagtgcttga 18727152  T
Q  878 atgttgatgtcc 889  Q
    |||||| |||||    
T  18727153 atgttggtgtcc 18727164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 579 - 881
Target Start/End: Original strand, 38176923 - 38177225
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||| ||| | ||||| |||||||||||||||  |||||    ||| ||||||| |||||| ||||||| || | |||| || | ||||       
T  38176923 gctctttcttccccaattgtataacattggaaccctaattacacaatcaacaatttacactctaaaattaccaaaatatcctccaattataaatggtcca 38177022  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 778  Q
    |||||||||||||||||||| ||||||||||||||        |||||||  ||||  |||||||  ||||||||||| |||||||| | || || ||||    
T  38177023 gttcttccccaattcaaaaaacttcaaaccctaattttttcgtattgaatttgaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaattga 38177122  T
Q  779 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaa 878  Q
    ||||||||||||| |||||||   || ||| ||||  | ||||||||||| ||||| |||||  ||||||| ||||||||||| ||||||||||||||||    
T  38177123 atctgaaatgatggggggtggaaatatgggaaaaaatagttatgaaagtcgagcttcatcttcgagctccaagtttaatggtgttgtgagagtgcttgaa 38177222  T
Q  879 tgt 881  Q
    |||    
T  38177223 tgt 38177225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 579 - 881
Target Start/End: Original strand, 38204147 - 38204449
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||| ||| | ||||| |||||||||||||||  |||||    ||| ||||||| |||||| ||||||| || | |||| || | ||||       
T  38204147 gctctttcttccccaattgtataacattggaaccctaattacacaatcaacaatttacactctaaaattaccaaaatatcctccaattataaatggtcca 38204246  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 778  Q
    |||||||||||||||||||| ||||||||||||||        |||||||  ||||  |||||||  ||||||||||| |||||||| | || || ||||    
T  38204247 gttcttccccaattcaaaaaacttcaaaccctaattttttcgtattgaatttgaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaattga 38204346  T
Q  779 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaa 878  Q
    ||||||||||||| |||||||   || ||| ||||  | ||||||||||| ||||| |||||  ||||||| ||||||||||| ||||||||||||||||    
T  38204347 atctgaaatgatggggggtggaaatatgggaaaaaatagttatgaaagtcgagcttcatcttcgagctccaagtttaatggtgttgtgagagtgcttgaa 38204446  T
Q  879 tgt 881  Q
    |||    
T  38204447 tgt 38204449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 583 - 889
Target Start/End: Original strand, 35291343 - 35291644
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    |||||||| ||| | |||||||||| |||||| |||  ||||   | |||||||||||||||||  |||||||||| | || |||| ||||||   ||||    
T  35291343 tttcttccccaattgtataaaattgaaaccctgattacacaa---gcaatctacactccaaaatcaccaaaatttcctccagtaataagtggtccggttc 35291439  T
Q  683 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 782  Q
    |||||||||||| ||| |||||||||||||         |||||||  |||  ||||||||  ||||||||||| |||||||| | || || ||| ||||    
T  35291440 ttccccaattcacaaaacttcaaaccctaac-tttttgcattgaatttgaatgtcaaaatcctcaaaatttcttgaagcaaaactattgaaattggatct 35291538  T
Q  783 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 882  Q
    ||||||||| ||||||||  || ||| |||| || |||||||||||||| || ||||| |||||||| ||||||||||||||||| ||||||||||||||    
T  35291539 gaaatgatg-ggggtgggaatatgggaaaaaacagttatgaaagtcaagtttcatcttcaagctccaagtttaatggtgatgtgatagtgcttgaatgtt 35291637  T
Q  883 gatgtcc 889  Q
    | |||||    
T  35291638 ggtgtcc 35291644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 598 - 889
Target Start/End: Complemental strand, 40330296 - 40330004
Alignment:
Q  598 tataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaa 697  Q
    |||||||||||||||||||||  |||||||| |||||||||||||||||  | |||||||| | ||||||| ||||||   | ||||||||||||||| |    
T  40330296 tataaaattggaaccctaattacacaatatgcaatctacactccaaaatcacaaaaatttcctccaataataagtggtccagctcttccccaattcaaca 40330197  T
Q  698 agcttcaaaccctaatannnnnnn-attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgagggg 796  Q
    | ||| ||||||||||         |||||||  ||||  |||||||   |||||||||| |||||||| | || || |||| |||||||||||| ||||    
T  40330196 aacttgaaaccctaattttttccgtattgaatatgaaagccaaaatcttgaaaatttcttgaagcaaaactattgaaattgattctgaaatgatgggggg 40330097  T
Q  797 tgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 889  Q
    |||   || ||| ||||  | ||||||||||| ||||| ||||| ||  |||| ||||||||||||||||||||||||||||||||| |||||    
T  40330096 tggaaatatgggaaaaaatagttatgaaagtcgagcttcatcttcaatttccaagtttaatggtgatgtgagagtgcttgaatgttggtgtcc 40330004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 579 - 889
Target Start/End: Complemental strand, 32089725 - 32089411
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||| ||| | |||||||||||||||||||||  ||||| || ||||||||||| | |||    |||||||  | ||||||| || |||       
T  32089725 gctctttcttccccaattgtataaaattggaaccctaattacacaatctgcaatctacactctataatcatgaaaatttactccaataataagaggttca 32089626  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnn-attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttg 777  Q
    ||||| |||||||||||||| ||||||||||||||         | |||||| ||||  |||||||  ||||||||||| |||||||| | || || |||    
T  32089625 gttctgccccaattcaaaaaacttcaaaccctaatttttttcgtagtgaatctgaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaattg 32089526  T
Q  778 aat-ctg--aaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgct 874  Q
    ||| ||   |||||||| ||||||||  || ||| |||| |  ||||||||||||||||| ||||| |||||||| ||||||||||| ||||||||||||    
T  32089525 aatacttcaaaatgatgtggggtgggaatatgggaaaaaacggttatgaaagtcaagcttcatcttcaagctccaagtttaatggtgttgtgagagtgct 32089426  T
Q  875 tgaatgttgatgtcc 889  Q
    ||||||||| |||||    
T  32089425 tgaatgttggtgtcc 32089411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 581 - 713
Target Start/End: Original strand, 1343482 - 1343614
Alignment:
Q  581 tctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 680  Q
    ||||||||||  |||||||||||||||  |||||||||||| ||| | ||| ||||||||||||||  |||||||||||| ||||| |||||||||||||    
T  1343482 tctttcttccctaaatatataaaattgacaccctaattttataatctttaaactacactccaaaatctccaaaatttcttccaatagttagtggtaacgt 1343581  T
Q  681 tcttccccaattcaaaaagcttcaaaccctaat 713  Q
    | |||||||||| ||||| || |||||||||||    
T  1343582 ttttccccaatttaaaaaactccaaaccctaat 1343614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 583 - 813
Target Start/End: Complemental strand, 27350322 - 27350095
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    |||||| | ||||| |||||||||||||||||||||||| ||| | ||||  |||| ||||||||||||||| ||||||||||||||||| |||||||||    
T  27350322 tttctttcccaaatgtataaaattggaaccctaattttataatctttaattcacacgccaaaattcccaaaaattctttcaataattagt-gtaacgttc 27350224  T
Q  683 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaat-tcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatc 781  Q
     ||||||||| ||| | | |||||||||| |        ||||||||| ||||   |||||| ||||||||||||||| ||||| ||||  | ||||||     
T  27350223 atccccaattgaaataacctcaaaccctatt--ttttttattgaatccaaaataaaaaaatccccaaaatttcttcaaacaaaactgttgtaattgaata 27350126  T
Q  782 tgaaatgatgaggggtgggtgtaagggcaaaa 813  Q
     ||||||||| |||||||||||| ||||||||    
T  27350125 agaaatgatg-ggggtgggtgtatgggcaaaa 27350095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 736 - 889
Target Start/End: Original strand, 43317176 - 43317329
Alignment:
Q  736 tcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagcttt 835  Q
    ||||||||  ||||||||||| |||||||| |  | || ||| ||||||||||||| ||||||||  || ||  |||| || ||||||||||| |||||     
T  43317176 tcaaaatcctcaaaatttcttgaagcaaaactagtgaaattggatctgaaatgatggggggtgggaatatggaaaaaaacagttatgaaagtcgagcttc 43317275  T
Q  836 atctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 889  Q
    ||||| || ||||| ||||||||||||||||||||||||||||||||| |||||    
T  43317276 atcttcaaactccaagtttaatggtgatgtgagagtgcttgaatgttggtgtcc 43317329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 598 - 883
Target Start/End: Original strand, 32836186 - 32836470
Alignment:
Q  598 tataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaa 697  Q
    ||||| |||||||||||||||  ||||| || ||| ||||||  |||||  ||||||| || | |||  || | |||| | |||||||||||||||||||    
T  32836186 tataacattggaaccctaattacacaatctgcaatttacactataaaatcaccaaaatatcctccaaatataaatggtcaagttcttccccaattcaaaa 32836285  T
Q  698 agcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggt 797  Q
    | ||||||||||||||        |||||||   |||  |||||||  |||||  | || |||||||| | || || ||||||||||||||||| |||||    
T  32836286 aacttcaaaccctaattttttcgtattgaatttaaaagccaaaatcctcaaaaaattttgaagcaaaactattgaaattgaatctgaaatgatg-ggggt 32836384  T
Q  798 gggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttg 883  Q
    |||  || | | |||| || ||||||||||| ||||| |||||  ||||||| ||||||||||| |||||||||||||||||||||    
T  32836385 gggaatatgtgaaaaaacagttatgaaagtcgagcttcatcttcgagctccaagtttaatggtgttgtgagagtgcttgaatgttg 32836470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 579 - 813
Target Start/End: Complemental strand, 6116700 - 6116465
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||| ||||| |||||||||| |||||||||||| |||| | ||||||||| || ||||| ||||||||||||| || ||||||     |||    
T  6116700 gctctttcttccccaaatctataaaattgaaaccctaatttttcaatctctaatctacagtcaaaaatccccaaaatttcttccattaatta---acaac 6116604  T
Q  679 --gttcttccccaattcaaaaagcttcaaaccctaa--tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaat 774  Q
       ||||||||  |||| |||| |||||||||||||  |        |||||||  ||||| ||||||| ||||||||||||||  |||||||||||||     
T  6116603 catttcttccctgattctaaaaacttcaaaccctaatttttgttttgattgaatatgaaatccaaaatccccaaaatttcttcattcaaaattgttcaaa 6116504  T
Q  775 ttgaatctgaaatgatgaggggtgggtgtaagggcaaaa 813  Q
    ||||||| ||||||||| | | ||||||||  |||||||    
T  6116503 ttgaatccgaaatgatgggtgatgggtgtataggcaaaa 6116465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 737 - 889
Target Start/End: Complemental strand, 18341745 - 18341593
Alignment:
Q  737 caaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagcttta 836  Q
    ||||||| ||||||||||||||| ||||||||||||  ||||||||||||||||| | |||||  ||| |||||||| || || | ||| |  ||||| |    
T  18341745 caaaatccccaaaatttcttcaatcaaaattgttcagattgaatctgaaatgatgggtggtggtcgtatgggcaaaaacagttctcaaacttgagcttca 18341646  T
Q  837 tctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 889  Q
    || | || ||| |||||||| |||||||| ||| ||||||||||||| |||||    
T  18341645 tcctcaaactctatgtttaacggtgatgtaagaatgcttgaatgttggtgtcc 18341593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 396 - 576
Target Start/End: Original strand, 25509593 - 25509773
Alignment:
Q  396 ttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcag 495  Q
    |||||||||| ||||||| ||||||||| |  |||  | || |||| ||||||||||||| |||||| |||||||||  ||| |||| |||||||  |||    
T  25509593 ttgaatttgtgatatgtcgatcaatttacttcctccgtacatttggggtgttaacggtgctgacgtggccgttaacccttcaaatggcttgccatgacag 25509692  T
Q  496 atgccacagaagcagagactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatttgtagaaaatgct 576  Q
    ||| |||| ||| || ||||||| |||  || |||||||||||||| ||||||  ||||| ||||||||| | ||||||||    
T  25509693 atgtcacataagtagggactaatttggctgatagtgaccaaaattttcaaggacaaaattgattgatttgcataaaatgct 25509773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 579 - 713
Target Start/End: Original strand, 18623765 - 18623899
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||| |||||||||||| ||||||||||||| ||| |||  || | ||| | | |||||| ||||||||||||| ||  ||||  ||  ||     
T  18623765 gctctttcttccccaaatatataaatttggaaccctaatgttataattcgtcacctagagttcaaaatccccaaaatttcttacatgaattgatgccaaa 18623864  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    |||||||||||||||||||| ||| ||||||||||    
T  18623865 gttcttccccaattcaaaaaacttaaaaccctaat 18623899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 377 - 481
Target Start/End: Complemental strand, 1344842 - 1344738
Alignment:
Q  377 cgaaatattaaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctc 476  Q
    |||||||| ||| ||||| |||||||||| | |||||||||||||||||| |||  ||||| |||| ||||||| || |  ||||| |||||||||||||    
T  1344842 cgaaatatcaaaatagtccttgaatttgtaaaatgtcaatcaatttagtccctccgtccaaatggaatgttaaccgtacttacgtggccgttaacctctc 1344743  T
Q  477 acatg 481  Q
    |||||    
T  1344742 acatg 1344738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 369 - 481
Target Start/End: Original strand, 38176687 - 38176799
Alignment:
Q  369 taattatgcgaaatattaaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgtt 468  Q
    |||||||||||||||| || ||| ||  ||||||||||| || |||||||| ||| ||  ||| | |||  ||||||||||||| || ||||||||||||    
T  38176687 taattatgcgaaatatcaatttaatccctgaatttgttaaatatcaatcaagttactccttctgttcaaacggagtgttaacggggctgacgtgaccgtt 38176786  T
Q  469 aacctctcacatg 481  Q
    |||||||||||||    
T  38176787 aacctctcacatg 38176799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 369 - 481
Target Start/End: Original strand, 38203911 - 38204023
Alignment:
Q  369 taattatgcgaaatattaaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgtt 468  Q
    |||||||||||||||| || ||| ||  ||||||||||| || |||||||| ||| ||  ||| | |||  ||||||||||||| || ||||||||||||    
T  38203911 taattatgcgaaatatcaatttaatccctgaatttgttaaatatcaatcaagttactccttctgttcaaacggagtgttaacggggctgacgtgaccgtt 38204010  T
Q  469 aacctctcacatg 481  Q
    |||||||||||||    
T  38204011 aacctctcacatg 38204023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 313 - 481
Target Start/End: Complemental strand, 40330606 - 40330439
Alignment:
Q  313 gagtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatatgt 412  Q
    ||||||||||||||||| |||  ||||||||  | || ||||  ||||||||||   ||||||||||||||| || ||| ||  ||||||||||| ||||    
T  40330606 gagtgaatcatcaacttcgtccctgaattttc-acgggtcggccaaaatcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgt 40330508  T
Q  413 caatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 481  Q
     |||||| ||||||  ||| | |||  |||| ||||||||||| |||||| |||| |||||||||||||    
T  40330507 gaatcaagttagtccttctgttcaaacggagcgttaacggtgctgacgtggccgtcaacctctcacatg 40330439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 373 - 481
Target Start/End: Original strand, 43316839 - 43316947
Alignment:
Q  373 tatgcgaaatattaaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacc 472  Q
    |||||||||||| || ||| ||  ||||||||||| ||||||||||| ||||||  ||| | |||  |||| |||||||| || ||||||||||||||||    
T  43316839 tatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtccttctgttcaaacggagcgttaacggagctgacgtgaccgttaacc 43316938  T
Q  473 tctcacatg 481  Q
    |||||||||    
T  43316939 tctcacatg 43316947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 350 - 481
Target Start/End: Original strand, 1343257 - 1343388
Alignment:
Q  350 atcggttaaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaa 449  Q
    |||||||||| ||||||  |||||   | |||||| ||| |||||||||||||||| | || ||||||||||||||| |||  ||||| |||||||||||    
T  1343257 atcggttaaattcgtcccttaatttaacaaaatatcaaaatagtctttgaatttgtaaaatatcaatcaatttagtccctccgtccaaatggagtgttaa 1343356  T
Q  450 cggtgcagacgtgaccgttaacctctcacatg 481  Q
    |||||| ||  || | || |||||||||||||    
T  1343357 cggtgctgatatggctgtcaacctctcacatg 1343388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 579 - 713
Target Start/End: Original strand, 32134556 - 32134690
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||  |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  ||     
T  32134556 gctctttcttctacaaatatataaatttggaaccctaatgttataatttgtcacctatagttcaaaatcccccaaatttcttccatgaattgatgtcaat 32134655  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    |||||||||||||||||||| ||| ||||||||||    
T  32134656 gttcttccccaattcaaaaaacttaaaaccctaat 32134690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 598 - 861
Target Start/End: Complemental strand, 35400489 - 35400226
Alignment:
Q  598 tataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaa 697  Q
    |||||||||||||||||||||  |||||||| ||||||||||| | ||||   |||||||| | ||||||| ||||||    ||||  ||||||| ||||    
T  35400489 tataaaattggaaccctaattacacaatatgcaatctacactctataattatgaaaatttcctccaataataagtggtccaattctgtcccaatttaaaa 35400390  T
Q  698 agcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggt 797  Q
    | |||||||||  | |        | ||| || ||||  |||||||  ||||||||||| |||||||| | || || ||||||||||||||||| |||||    
T  35400389 aacttcaaacctaatttttttcgtagtgagtctgaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaattgaatctgaaatgatggggggt 35400290  T
Q  798 gggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtg 861  Q
    |||  || ||| ||||    || ||||||||||| || ||||| || ||||| |||||||||||    
T  35400289 gggaatatgggaaaaaaaggttttgaaagtcaagtttcatcttcaaactccaagtttaatggtg 35400226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 397 - 481
Target Start/End: Original strand, 35291131 - 35291215
Alignment:
Q  397 tgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 481  Q
    ||||||||||| ||||||||||| ||||||  ||| | ||| ||||| |||||||| || |||||| ||||||||||||||||||    
T  35291131 tgaatttgttaaatgtcaatcaagttagtccttctgttcaaatggagcgttaacggagctgacgtggccgttaacctctcacatg 35291215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 580 - 713
Target Start/End: Complemental strand, 34328600 - 34328466
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaat-tcccaaaatttctttcaataattagtggtaac 678  Q
    ||||||||||| |||||||||||| ||||||||||||| ||| ||| |||   ||| | | ||||||  ||||||||||||| ||  ||||  ||  ||     
T  34328600 ctctttcttccccaaatatataaatttggaaccctaatattataatttgtcgcctagagttcaaaatcccccaaaatttcttccatgaattgatgtcaat 34328501  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    |||||||||||||||||||| ||| ||||||||||    
T  34328500 gttcttccccaattcaaaaaacttaaaaccctaat 34328466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 580 - 713
Target Start/End: Complemental strand, 12738470 - 12738337
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 679  Q
    |||||||||||  ||| ||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  || |    
T  12738470 ctctttcttccctaaacatataaatttggaaccctaatgttataatttgttacctagagttcaaaatcccccaaatttcttacatgaattgatgtcaatg 12738371  T
Q  680 ttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    ||||||||||||||||||| ||| ||||||||||    
T  12738370 ttcttccccaattcaaaaaacttaaaaccctaat 12738337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 580 - 713
Target Start/End: Complemental strand, 12801293 - 12801160
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 679  Q
    |||||||||||  ||| ||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  || |    
T  12801293 ctctttcttccctaaacatataaatttggaaccctaatgttataatttgttacctagagttcaaaatcccccaaatttcttacatgaattgatgtcaatg 12801194  T
Q  680 ttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    ||||||||||||||||||| ||| ||||||||||    
T  12801193 ttcttccccaattcaaaaaacttaaaaccctaat 12801160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 580 - 713
Target Start/End: Complemental strand, 27077256 - 27077123
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 679  Q
    ||||||||||| |||||  |||| |||||||||||||||||| ||| ||| |   | | | ||||||  | |||||||||| || |||||  ||  ||||    
T  27077256 ctctttcttccccaaatccataacattggaaccctaattttataatttgtcactgagagttcaaaatctctaaaatttcttccattaattgatgacaacg 27077157  T
Q  680 ttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    ||||||||||||||||||| ||||||| ||||||    
T  27077156 ttcttccccaattcaaaaaacttcaaaacctaat 27077123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 580 - 713
Target Start/End: Complemental strand, 33257559 - 33257426
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 679  Q
    ||||||||||| ||| | |||||||||| |||||| |||  ||||| || ||| ||||||| | |||    |||||||| | ||||||| ||||||   |    
T  33257559 ctctttcttccccaattgtataaaattgtaaccctgattacacaatctgcaatatacactctataatcatgaaaatttcctccaataataagtggttcag 33257460  T
Q  680 ttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    |||| |||||||||||||| ||||||||||||||    
T  33257459 ttctgccccaattcaaaaaacttcaaaccctaat 33257426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 313 - 481
Target Start/End: Complemental strand, 32090016 - 32089849
Alignment:
Q  313 gagtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatatgt 412  Q
    ||||||||||||||||| |||  |||||||| || || ||||  ||  ||||||   ||||||||||||||| || ||| ||  ||||||||||| ||||    
T  32090016 gagtgaatcatcaacttcgtccctgaatttt-tacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgt 32089918  T
Q  413 caatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 481  Q
    ||||||| ||||||  | | | |||  |||| |||||||| || |||| | ||||||||||||||||||    
T  32089917 caatcaagttagtccttatgttcaaacggagcgttaacggggctgacgcggccgttaacctctcacatg 32089849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 313 - 481
Target Start/End: Original strand, 32835876 - 32836043
Alignment:
Q  313 gagtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatatgt 412  Q
    ||||||||||||||||| |||  ||||||||  | || ||||| ||| ||||||  |||||||||||||||| || ||| ||  ||||||| ||| ||||    
T  32835876 gagtgaatcatcaacttcgtccctgaattttc-acgggtcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttattaaatgt 32835974  T
Q  413 caatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 481  Q
    ||||||| ||||||  ||  | |||   ||  |||||||| || |||||| ||||||||||||||||||    
T  32835975 caatcaagttagtccttcggttcaaacagaacgttaacggggctgacgtggccgttaacctctcacatg 32836043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 842 - 889
Target Start/End: Complemental strand, 33257309 - 33257262
Alignment:
Q  842 aagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 889  Q
    |||||||| ||||||||||| ||||||||||||||||||||| |||||    
T  33257309 aagctccaagtttaatggtgttgtgagagtgcttgaatgttggtgtcc 33257262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 592 - 710
Target Start/End: Original strand, 41494167 - 41494285
Alignment:
Q  592 caaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaat 691  Q
    |||||||||||| ||||||||| ||| ||| ||| ||| | ||| | | |||||| ||||||||||||| ||  ||||  ||  || |||||||||||||    
T  41494167 caaatatataaatttggaacccgaatgttataatttgtcacctagagttcaaaatccccaaaatttcttccatgaattgatgacaaagttcttccccaat 41494266  T
Q  692 tcaaaaagcttcaaaccct 710  Q
    ||||||| ||| |||||||    
T  41494267 tcaaaaaacttaaaaccct 41494285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 579 - 660
Target Start/End: Original strand, 30464263 - 30464344
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctt 660  Q
    |||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| |||||||||    
T  30464263 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgttacctagagttcaaaatcccccaaatttctt 30464344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 443 - 503
Target Start/End: Complemental strand, 27350497 - 27350437
Alignment:
Q  443 gtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccaca 503  Q
    |||||||||  || |||||| ||||||||||||||||||| ||||||| ||||| ||||||    
T  27350497 gtgttaacgaagctgacgtggccgttaacctctcacatggattgccatgtcagacgccaca 27350437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 580 - 660
Target Start/End: Original strand, 28035772 - 28035852
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctt 660  Q
    |||||||||||||| ||||||||||||| |||| ||| ||| |||| | |||| |||| |  |||||| ||||||||||||    
T  28035772 ctctttcttcctcagatatataaaattgaaaccttaacttttcaatctctaatttacagtttaaaatttccaaaatttctt 28035852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 369 - 481
Target Start/End: Complemental strand, 33257796 - 33257684
Alignment:
Q  369 taattatgcgaaatattaaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgtt 468  Q
    |||||||||||||||| || ||| ||  ||||||||||| ||||||||||| ||||||  ||| | |||  |||| ||||||   || |||||| |||||    
T  33257796 taattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtccttctgttcaaacggagcgttaacaaggctgacgtggccgtt 33257697  T
Q  469 aacctctcacatg 481  Q
    |||||||| ||||    
T  33257696 aacctctcgcatg 33257684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 313 - 481
Target Start/End: Original strand, 42619289 - 42619456
Alignment:
Q  313 gagtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatatgt 412  Q
    ||||||||||||||||| |||  ||||||||  | || ||||| ||  ||||||   ||||||||||||||| || ||| ||   |||||||||| ||||    
T  42619289 gagtgaatcatcaacttcgtccctgaattttc-acgggtcggtcaatttcgtccctcaattatgcgaaatatcaatttaatcccagaatttgttaaatgt 42619387  T
Q  413 caatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 481  Q
    ||||||| ||||||  ||  | |||  ||||| ||||||| ||  ||||| ||||||||||||||||||    
T  42619388 caatcaagttagtccttcagttcaaacggagtattaacggggctaacgtggccgttaacctctcacatg 42619456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 836 - 883
Target Start/End: Complemental strand, 27077010 - 27076963
Alignment:
Q  836 atctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttg 883  Q
    ||||| |||||| || |||||||||||||||||||| |||||||||||    
T  27077010 atcttcaagctctatttttaatggtgatgtgagagtacttgaatgttg 27076963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 579 - 669
Target Start/End: Complemental strand, 28821860 - 28821770
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataatt 669  Q
    |||||||||||| |||||||||||| ||| ||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| || |||||    
T  28821860 gctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccattaatt 28821770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 583 - 617
Target Start/End: Original strand, 29620495 - 29620529
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaat 617  Q
    ||||||||||||||||||||| |||||||||||||    
T  29620495 tttcttcctcaaatatataaatttggaaccctaat 29620529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 136; Significance: 2e-70; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 314 - 705
Target Start/End: Complemental strand, 31210530 - 31210129
Alignment:
Q  314 agtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatatgtc 413  Q
    |||||||||||| ||| ||  ||||||||  ||||||||||| ||||||||||  ||||||||||||||||||||| | ||  ||||||||||||||||     
T  31210530 agtgaatcatcagcttcgttcttgaatttg-taaggatcggtcaaaatcgtcccttaattatgcgaaatattaaataaatccctgaatttgttatatgta 31210432  T
Q  414 aatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcagaga 513  Q
    ||||||||||||| |||  ||||||| | ||||||||||||  |||||| |||||||||||||||||||||   ||| ||| |||||||| ||||||  |    
T  31210431 aatcaatttagtccctccgtccaatttgggtgttaacggtgttgacgtggccgttaacctctcacatgggtcttcatgtcatatgccacacaagcaggaa 31210332  T
Q  514 ctaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatttgtagaaaatgctttgctctttcttcctcaa---atatat--------aa 602  Q
    ||||| ||| ||| | | |||||||||| ||||||  ||||| ||||||||||||||||||||||||||||||| ||||||    ||| |        ||    
T  31210331 ctaatttggccgataataaccaaaattttcaaggactaaattgattgatttgtagaaaatgctttgctctttctccctcaacggttatttcttccccaaa 31210232  T
Q  603 aattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagctt 702  Q
     |||| || |||||||||||||| ||||||||||||||||||||  | ||||| |  | ||||||||||||||||| ||||||||||||||||||| |||    
T  31210231 tattgaaaacctaattttacaatctgtaatctacactccaaaatctcaaaaatattatccaataattagtggtaactttcttccccaattcaaaaaactt 31210132  T
Q  703 caa 705  Q
    |||    
T  31210131 caa 31210129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 583 - 883
Target Start/End: Original strand, 17950853 - 17951152
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  17950853 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 17950952  T
Q  683 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 782  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || ||||||||    
T  17950953 ttccccaaatcaaaaaattacaaaccctaat-ttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 17951051  T
Q  783 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 882  Q
     |||||||| | |||||   |  ||||||||  |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  17951052 aaaatgatgggaggtggtcatttgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 17951151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 583 - 883
Target Start/End: Original strand, 35174674 - 35174974
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  35174674 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 35174773  T
Q  683 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 782  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || ||||||||    
T  35174774 ttccccaaatcaaaaaattgcaaaccctaattttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 35174873  T
Q  783 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 882  Q
     |||| ||| | ||||    || ||||||||  |  ||| |||||||||||| ||||| |  ||||||||||||||||||| ||||||||| ||||||||    
T  35174874 aaaataatgggaggtgatcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatatgagagtgcctgaatgtt 35174973  T
Q  883 g 883  Q
    |    
T  35174974 g 35174974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 581 - 877
Target Start/End: Complemental strand, 17936339 - 17936042
Alignment:
Q  581 tctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 680  Q
    |||||||||||||||| |||||||||| |||||||||||| |||| | ||||||||| |||||||||||||||||||||| || |||||| ||  |||||    
T  17936339 tctttcttcctcaaatctataaaattgaaaccctaatttttcaatctctaatctacaatccaaaattcccaaaatttcttccattaattaatgacaacgt 17936240  T
Q  681 tcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaat 780  Q
    | || || | ||| |||| ||||||||||||||        |||||||| ||||| ||||||| ||||||    ||||||||||||||||||  ||||||    
T  17936239 tattgcctacttctaaaaacttcaaaccctaatttgttttgattgaatctgaaatccaaaatccccaaaaaaaattcaagcaaaattgttcagattgaat 17936140  T
Q  781 ctgaaatgatgaggggtgggtgtaagggc-aaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttga 877  Q
    | ||||||||| | |||||  ||| |||| |||| || || | |||||| ||||| ||||| ||  |  ||||||||||||||||| ||| |||||||    
T  17936139 ccgaaatgatgggtggtggacgtatgggcaaaaaacagttctcaaagtcgagcttcatcttcaaaatttatgtttaatggtgatgtcagaatgcttga 17936042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 583 - 883
Target Start/End: Complemental strand, 34345123 - 34344824
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    ||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||   |||| |||||| |||||||||  ||| ||||||    
T  34345123 tttcttcctaaaatatataaaattggaaccctaactttacaatgtgtaatctacactccaaaatcttcaaattttcttccaataattaagggtcacgttc 34345024  T
Q  683 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 782  Q
    |||||| | | |||||  | |||||||||||        |||| ||  ||||  |||||||  |||||||  || |||||||| |||| || ||||||||    
T  34345023 ttccccgaataaaaaaattgcaaaccctaattttttttaattggatatgaaaaccaaaatctgcaaaattcatttaagcaaaagtgttgaaattgaatct 34344924  T
Q  783 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 882  Q
     |||||||  |||||||   || ||||||||  |  ||| |||||||||||| | ||| |  ||||||||||||||||||||||||||||||||||||||    
T  34344923 aaaatgat-tggggtggtcatatgggcaaaaagagctatcaaagtcaagcttcaacttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 34344825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 583 - 711
Target Start/End: Original strand, 4289710 - 4289838
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    |||||||| ||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  4289710 tttcttccccaaatatataaaattggaatcctaattttacaatgtgtaatctatactccaaaatctccaaattttcttccaataattaagggtcacgttc 4289809  T
Q  683 ttccccaattcaaaaagcttcaaacccta 711  Q
    |||||||| |||||||  | |||||||||    
T  4289810 ttccccaaatcaaaaaattgcaaacccta 4289838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 579 - 713
Target Start/End: Original strand, 33277101 - 33277234
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    ||||||||||| ||||||||||||| |||||||||| |||||| ||| ||| | ||| | | |||||| ||||||||||||| ||  ||||  |  |||     
T  33277101 gctctttcttc-tcaaatatataaatttggaaccctgattttataatttgtcacctagagttcaaaatccccaaaatttcttccatgaattgatattaaa 33277199  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    |||||||||||||||||||| ||| ||||||||||    
T  33277200 gttcttccccaattcaaaaaacttaaaaccctaat 33277234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 580 - 713
Target Start/End: Original strand, 7371453 - 7371586
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 679  Q
    ||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  || |    
T  7371453 ctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatgtcaatg 7371552  T
Q  680 ttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    ||||||||||||||||||| ||| ||||||||||    
T  7371553 ttcttccccaattcaaaaaacttaaaaccctaat 7371586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 314 - 454
Target Start/End: Original strand, 21134978 - 21135117
Alignment:
Q  314 agtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatatgtc 413  Q
    |||||||||| ||||| ||| ||||||||  ||||||||||| |||||||||  | | |||| |||||||| ||||||||  |||| ||||| ||||||     
T  21134978 agtgaatcattaacttcgtccttgaatttg-taaggatcggtcaaaatcgtctcccagttatacgaaatatcaaattagttcttgagtttgtcatatgtg 21135076  T
Q  414 aatcaatttagtcactctatccaattggagtgttaacggtg 454  Q
    |||||||||| |  |||| |||||||  |||||||||||||    
T  21135077 aatcaatttaattcctctgtccaattaaagtgttaacggtg 21135117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 396 - 564
Target Start/End: Original strand, 25170379 - 25170547
Alignment:
Q  396 ttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcag 495  Q
    |||||||||| |||| |||||||| |||||| ||   |||| |||  | | ||||||||  || ||| ||||||||||||||||| ||||||||| ||||    
T  25170379 ttgaatttgtcatatctcaatcaaattagtccctacgtccatttgtggcgataacggtgatgatgtggccgttaacctctcacattggttgccatgtcag 25170478  T
Q  496 atgccacagaagcagagactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgattt 564  Q
    |||||||| |||||   |||||  ||||||| |||||| |||| || ||||||  ||||| ||||||||    
T  25170479 atgccacataagcatgaactaaattggtcgatagtgacaaaaaatttcaaggacgaaattgattgattt 25170547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 581 - 705
Target Start/End: Original strand, 30639903 - 30640027
Alignment:
Q  581 tctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 680  Q
    ||||||||||| || | ||||||||||||||| |||||  ||||| || ||||||||||| |||||  || ||||||| | ||||||| ||||||   ||    
T  30639903 tctttcttccttaattgtataaaattggaaccataattacacaatctgcaatctacactctaaaatcacctaaatttcctccaataataagtggtccagt 30640002  T
Q  681 tcttccccaattcaaaaagcttcaa 705  Q
    ||||||  |||||||||| ||||||    
T  30640003 tcttccataattcaaaaaacttcaa 30640027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 310 - 426
Target Start/End: Complemental strand, 4646310 - 4646195
Alignment:
Q  310 aaagagtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttata 409  Q
    |||||||||| |||||||||  ||  |||||||| || |||||||||||| ||||||   ||||||||||||||| || ||| ||  | |||||||||      
T  4646310 aaagagtgaaccatcaacttaatccctgaatttt-tacggatcggttaaattcgtccatcaattatgcgaaatatcaatttaatccctaaatttgttaat 4646212  T
Q  410 tgtcaatcaatttagtc 426  Q
    |||||||||||||||||    
T  4646211 tgtcaatcaatttagtc 4646195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 579 - 698
Target Start/End: Complemental strand, 11356922 - 11356803
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | ||||||  || ||||||||| ||  ||||  ||  ||     
T  11356922 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgttacctagagttcaaaatctcccaaatttcttccatgaattgatgtcaat 11356823  T
Q  679 gttcttccccaattcaaaaa 698  Q
    ||||||||||||||||||||    
T  11356822 gttcttccccaattcaaaaa 11356803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 377 - 561
Target Start/End: Complemental strand, 17936568 - 17936384
Alignment:
Q  377 cgaaatattaaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgt-gaccgttaacctct 475  Q
    ||||||||| |||||||   | ||||||| | |||||||||||||||||| |||  || | |||| |||||||||||||  |||| | |||||||   ||    
T  17936568 cgaaatatttaattagttcctaaatttgtcaaatgtcaatcaatttagtccctccgtcaagttggggtgttaacggtgctaacgtgggccgttaagtact 17936469  T
Q  476 cacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattga 561  Q
    ||||||| ||||||| ||| | || ||| || |||  |||||| || |||| ||||| |||||||||||||||  || ||||||||    
T  17936468 cacatggcttgccatgtcataagcgacacaaacaggaactaatatgatcgaaagtga-caaaatttccaaggaagaatttaattga 17936384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 583 - 660
Target Start/End: Original strand, 33267342 - 33267419
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctt 660  Q
    |||||||| |||||||| ||| ||||||||||||| ||| ||| ||| | ||| | | |||||| |||||||||||||    
T  33267342 tttcttccccaaatatacaaatttggaaccctaatgttataatttgtcacctagagttcaaaatccccaaaatttctt 33267419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 128; Significance: 1e-65; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 583 - 883
Target Start/End: Original strand, 11021825 - 11022125
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  11021825 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 11021924  T
Q  683 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 782  Q
    |||||||| |||||||  | |||||||||||        |||||||| |||| ||||||||  |||||||  ||||||||||| |||| || ||||||||    
T  11021925 ttccccaaatcaaaaaattgcaaaccctaattttttttaattgaatctgaaaatcaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 11022024  T
Q  783 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 882  Q
     ||||||||||||||||   || || |||||  |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  11022025 aaaatgatgaggggtggtcatatggacaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 11022124  T
Q  883 g 883  Q
    |    
T  11022125 g 11022125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 583 - 883
Target Start/End: Complemental strand, 28247974 - 28247674
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  28247974 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 28247875  T
Q  683 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 782  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || ||||||||    
T  28247874 ttccccaaatcaaaaaattgcaaaccctaattttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 28247775  T
Q  783 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 882  Q
     |||||||| | |||||   || ||||||||  |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  28247774 aaaatgatgggaggtggtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 28247675  T
Q  883 g 883  Q
    |    
T  28247674 g 28247674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 583 - 713
Target Start/End: Complemental strand, 363485 - 363354
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||    
T  363485 tttcttccccaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaatcctcaaaatttcttccaataattagtggtaacgttc 363386  T
Q  683 ttccccaattca-aaaagcttcaaaccctaat 713  Q
    ||| |||||||| |||| ||||||||||||||    
T  363385 ttctccaattcaaaaaaacttcaaaccctaat 363354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 583 - 872
Target Start/End: Original strand, 11313127 - 11313402
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    |||||||| ||||||||||||||| |||||||||||||||||| | |||| ||||||||||||| |||| ||||             |||||||||||||    
T  11313127 tttcttccccaaatatataaaattagaaccctaattttacaatctttaatgtacactccaaaatccccacaatt-------------agtggtaacgttc 11313213  T
Q  683 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 782  Q
    |||||||||| ||||| || |||||||| ||        |||||||||||||   | |||  ||||||||||||||||||||| ||||||| ||||||      
T  11313214 ttccccaattaaaaaaactccaaaccctcatttttttttattgaatccgaaaactagaattcccaaaatttcttcaagcaaaactgttcaaattgaatag 11313313  T
Q  783 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtg 872  Q
     || ||||| ||||||||  || ||||||||  | | || |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11313314 aaactgatg-ggggtgggcatatgggcaaaaagagtcatcaaagtcaagctttatcttcaagctccatgtttaatggtgatgtgagagtg 11313402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 583 - 883
Target Start/End: Complemental strand, 38149836 - 38149535
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    |||||| | |||||||||||||||||||||||||||||||||| |||||||||||||| |||||  ||||| |||||| |||||||||  ||| |||||     
T  38149836 tttctttcccaaatatataaaattggaaccctaattttacaatgtgtaatctacactctaaaatctccaaattttcttccaataattaagggtcacgtta 38149737  T
Q  683 ttccccaattcaaaaagcttcaaaccct-aatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatc 781  Q
    |||||||| |||||||  | |||| ||| | |        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || |||||||    
T  38149736 ttccccaaatcaaaaaattgcaaatcctgatttttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatc 38149637  T
Q  782 tgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgt 881  Q
    | |||||||| | |||||   || ||||||||  |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||| ||||| |||||    
T  38149636 taaaatgatgggaggtggtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagaatgcttaaatgt 38149537  T
Q  882 tg 883  Q
    ||    
T  38149536 tg 38149535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 583 - 713
Target Start/End: Complemental strand, 7745062 - 7744932
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    |||||| | ||||| |||||||||| ||||||||||||||||| | ||||| |||||||||||||||||||| ||||| |||||||||||||||||||||    
T  7745062 tttctttcccaaatgtataaaattgaaaccctaattttacaatctttaatccacactccaaaattcccaaaaattcttccaataattagtggtaacgttc 7744963  T
Q  683 ttccccaattcaaaaagcttcaaaccctaat 713  Q
    |||||||||| ||| | | ||||||||||||    
T  7744962 ttccccaattgaaataacctcaaaccctaat 7744932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 581 - 888
Target Start/End: Original strand, 10715400 - 10715690
Alignment:
Q  581 tctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 680  Q
    ||||| |||| |||||||||||||||||||||||||||||||||| | |||||||| ||  ||||||||||||||| ||| | ||||||||  |||||||    
T  10715400 tcttttttccccaaatatataaaattggaaccctaattttacaatctttaatctaccctaaaaaattcccaaaattccttccgataattagcagtaacgt 10715499  T
Q  681 tcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaat 780  Q
    | || ||||||||||||| ||||||||||||||        ||||||||| |||   | |||| ||||||||||||||||||||| ||||||| ||||||    
T  10715500 tgtt-cccaattcaaaaaacttcaaaccctaat--ttttttattgaatccaaaaactagaatccccaaaatttcttcaagcaaaactgttcaaattgaat 10715596  T
Q  781 ctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatg 880  Q
      |||||||||  |||||||  || || |||||  | |||| ||||||             |||||||||||||||||||| ||||||||||||||||||    
T  10715597 tcgaaatgatg-cgggtgggcatatggacaaaaagagttatcaaagtc-------------aagctccatgtttaatggtgctgtgagagtgcttgaatg 10715682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 580 - 713
Target Start/End: Complemental strand, 17948734 - 17948601
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 679  Q
    ||||||||| | ||||| |||||||||| ||||||||||||||||| | ||||| |||||||||||||||||||| ||||| |||||||| |||||||||    
T  17948734 ctctttctttcccaaatgtataaaattgaaaccctaattttacaatctttaatccacactccaaaattcccaaaaattcttccaataattggtggtaacg 17948635  T
Q  680 ttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    ||||||||||||| ||| | | ||||||||||||    
T  17948634 ttcttccccaattgaaataacctcaaaccctaat 17948601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 579 - 883
Target Start/End: Complemental strand, 37418569 - 37418263
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||| ||| | ||||| |||||||||||||||  ||||| || ||| ||||||| |||||  ||||||| || | |||| || | ||||       
T  37418569 gctctttcttccccaattgtataacattggaaccctaattacacaatctgcaatttacactctaaaatcaccaaaatatcctccaattataaatggtcca 37418470  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaa-tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttg 777  Q
    ||||||| |||||||||||| ||||||||||||| |        |||||||  ||||  |||||||  |||| |||||| |||||||| | || || |||    
T  37418469 gttcttcgccaattcaaaaaacttcaaaccctaatttttttcgtattgaatttgaaagccaaaatcctcaaagtttcttgaagcaaaactattgaaattg 37418370  T
Q  778 aatctgaaatgatgaggggtgggtgtaagg-gcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttg 876  Q
    |||||||||||||| ||||||||  || ||   |||| || ||||||||||| || || |||||  |||| || ||||||||||| ||||||||||||||    
T  37418369 aatctgaaatgatggggggtgggaatatggaaaaaaaacagttatgaaagtcgagtttcatcttcgagcttcaagtttaatggtgttgtgagagtgcttg 37418270  T
Q  877 aatgttg 883  Q
    |||||||    
T  37418269 aatgttg 37418263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 387 - 594
Target Start/End: Complemental strand, 363709 - 363509
Alignment:
Q  387 aattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttg 486  Q
    ||||||||  ||||||||| ||||||||| |||||||||| | |  |||||||    |||||||||||| |||||||| |||||||||| |||| ||||     
T  363709 aattagtccctgaatttgtcatatgtcaaccaatttagtcccccg-tccaatttagttgttaacggtgctgacgtgactgttaacctcttacataggttt 363611  T
Q  487 ccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatttgtagaaaatgctttgctctttc 586  Q
     ||| ||||||| |||| |||||  ||||||| ||| ||| |||||||||||||| ||||||       |||||||||| |||||||| |||||||||||    
T  363610 tcatgtcagatgtcacacaagcatggactaatttggccgatagtgaccaaaattttcaagga------caattgatttgcagaaaatgttttgctctttc 363517  T
Q  587 ttcctcaa 594  Q
    ||||||||    
T  363516 ttcctcaa 363509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 583 - 889
Target Start/End: Original strand, 35575 - 35881
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    |||||||| ||| | ||||||||| ||||| |||||  ||||| || ||| ||||||| | |||    |||||||| | ||||||| ||||||   ||||    
T  35575 tttcttccccaattgtataaaattcgaaccttaattacacaatctgcaatatacactctataatcatgaaaatttcctccaataataagtggttcagttc 35674  T
Q  683 ttccccaattcaaaaagcttcaaaccctaatannnnnnn-attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatc 781  Q
    | |||||||||||||| ||||||||||||||         | |||||| ||||  || ||||  ||||||||||| |||||||| | || || |||||||    
T  35675 tgccccaattcaaaaaacttcaaaccctaatttttttcgtagtgaatctgaaagccagaatcctcaaaatttcttgaagcaaaactattgaaattgaatc 35774  T
Q  782 tgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgt 881  Q
    |||||||||| || |||||  || ||  |||| |  |||||||||| ||| || ||||| |||||||| ||||||||||| |||||||||||||||||||    
T  35775 tgaaatgatgtggagtgggaatatggaaaaaa-cggttatgaaagttaagtttcatcttcaagctccaagtttaatggtgttgtgagagtgcttgaatgt 35873  T
Q  882 tgatgtcc 889  Q
    || |||||    
T  35874 tggtgtcc 35881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 583 - 706
Target Start/End: Original strand, 2359394 - 2359516
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    |||||||| ||||| |||||||||| ||||||||||||||||| ||| ||||| | ||||||| ||||||||||||| ||| |||||  ||  |||||||    
T  2359394 tttcttccccaaatctataaaattgaaaccctaattttacaatttgtcatctagagtccaaaa-tcccaaaatttctatcattaattgatgacaacgttc 2359492  T
Q  683 ttccccaattcaaaaagcttcaaa 706  Q
    ||||||||||| |||| |||||||    
T  2359493 ttccccaattctaaaaacttcaaa 2359516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 397 - 564
Target Start/End: Original strand, 4415256 - 4415423
Alignment:
Q  397 tgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcaga 496  Q
    ||||||||| |||| |||||||| |||||| ||   |||| |||| | ||||||||||  || ||| ||||||||||||||||||||||||||| |||||    
T  4415256 tgaatttgtcatatttcaatcaaattagtccctacgtccatttggggcgttaacggtgatgatgtggccgttaacctctcacatgggttgccatgtcaga 4415355  T
Q  497 tgccacagaagcagagactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgattt 564  Q
    ||||||| |||||  ||||||  || || | |||||| |||||||| |||||  ||||| ||||||||    
T  4415356 tgccacataagcaaggactaaattgatcaatagtgacaaaaatttcgaaggagaaaattgattgattt 4415423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 580 - 883
Target Start/End: Complemental strand, 42880610 - 42880309
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 679  Q
    ||||||||||| ||| | ||||| |||| ||||||||||  ||||| || ||| ||||||| |||||  ||||||| || | |||| || | ||||   |    
T  42880610 ctctttcttccccaattgtataacattgaaaccctaattacacaatctgcaatttacactctaaaatcaccaaaatatcctccaattataaatggtccag 42880511  T
Q  680 ttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaa 779  Q
    ||||||||||||| ||||| ||||||||||||||        ||| |||  ||||  |||||||  ||||||||||| |||||||| | || || |||||    
T  42880510 ttcttccccaatttaaaaaacttcaaaccctaattttttcgtattaaatttgaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaattgaa 42880411  T
Q  780 tctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaat 879  Q
    || ||||| ||| ||| ||||  || ||| |||| || ||||||||||| ||||| |||||| ||||| | |||||||||||   || ||||||||||||    
T  42880410 tcagaaatcatgggggttgggaatatgggaaaaaacagttatgaaagtcgagcttcatctttgagctctaagtttaatggtg--ttgcgagtgcttgaat 42880313  T
Q  880 gttg 883  Q
    ||||    
T  42880312 gttg 42880309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 466 - 563
Target Start/End: Complemental strand, 40099212 - 40099115
Alignment:
Q  466 gttaacctctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatt 563  Q
    ||||||||||||||||||||| ||| |||||||||||| |||||| ||||||  ||||||| |||||| ||||||||||||||  ||||| |||||||    
T  40099212 gttaacctctcacatgggttgtcatgtcagatgccacataagcagggactaaattggtcgatagtgacaaaaatttccaaggacaaaattgattgatt 40099115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 313 - 481
Target Start/End: Complemental strand, 42003581 - 42003414
Alignment:
Q  313 gagtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatatgt 412  Q
    ||||||||||| ||||| ||  ||||||||| |||||||| || ||| |||| |   ||||||||||||||| || ||| ||| ||||||||||| ||||    
T  42003581 gagtgaatcattaacttcgttcttgaatttt-taaggatcagtcaaattcgttcatcaattatgcgaaatatcaatttaatctctgaatttgttaaatgt 42003483  T
Q  413 caatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 481  Q
    ||||||| ||||||| ||| | ||   |||| |||||| | || |||||||||||||||||||||||||    
T  42003482 caatcaagttagtcattctgttcacacggagcgttaacagggctgacgtgaccgttaacctctcacatg 42003414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 377 - 481
Target Start/End: Original strand, 10715171 - 10715275
Alignment:
Q  377 cgaaatattaaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctc 476  Q
    |||||||| | | |||||||||||||||| | ||||||| |||||||||| |||| |||||||| |||||||||||||| ||| ||| |||||| ||||     
T  10715171 cgaaatatcataatagtctttgaatttgtaaaatgtcaaacaatttagtccctctgtccaattgaagtgttaacggtgctgacatgatcgttaatctctt 10715270  T
Q  477 acatg 481  Q
    |||||    
T  10715271 acatg 10715275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 312 - 548
Target Start/End: Complemental strand, 17949019 - 17948784
Alignment:
Q  312 agagtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatatg 411  Q
    |||||||||||||||||| |||  |||||||   ||| ||| |  |||||||||| | |||| |||||||||| || || ||| |||||||||| | |||    
T  17949019 agagtgaatcatcaacttcgtccatgaatttgc-aagcatcagccaaaatcgtccccaaattttgcgaaatatcaatttcgtccttgaatttgtaaaatg 17948921  T
Q  412 tcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcaga 511  Q
    ||||||||||| |||  || |   || ||| |||||||| | || |||||| |||||||||||||||||||  || ||| ||||| |||||| ||||||     
T  17948920 tcaatcaatttcgtccttccaattaactggggtgttaacagagctgacgtggccgttaacctctcacatggactgtcatgtcagacgccacacaagcagg 17948821  T
Q  512 gactaatgtggtcgacagtgaccaaaatttccaagga 548  Q
    ||||||| ||| |||  || ||||| |||| ||||||    
T  17948820 gactaatatggccgattgtaaccaacattttcaagga 17948784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 443 - 563
Target Start/End: Complemental strand, 14001454 - 14001336
Alignment:
Q  443 gtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttc 542  Q
    ||||||||||||  |||||| |||||||||||||||||||||| |||| ||||||| |||| |||||| ||||||  |||| || ||||||  ||||||     
T  14001454 gtgttaacggtgatgacgtggccgttaacctctcacatgggtttccatgtcagatgtcacataagcagggactaaattggttgatagtgac--aaatttt 14001357  T
Q  543 caaggatcaaattaattgatt 563  Q
    ||||||  ||||| |||||||    
T  14001356 caaggacgaaattgattgatt 14001336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 313 - 481
Target Start/End: Complemental strand, 28248266 - 28248099
Alignment:
Q  313 gagtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatatgt 412  Q
    ||||||||||||||||| |||  |||||||| || || ||||  ||  ||||||   ||||||||||||||| || ||| ||  ||||||||||| ||||    
T  28248266 gagtgaatcatcaacttcgtccctgaatttt-tacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgt 28248168  T
Q  413 caatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 481  Q
    ||||||| |||| || ||  | ||| ||||| |||||||| || |||||| ||||||||||||||||||    
T  28248167 caatcaagttaggcattcagttcaaatggagcgttaacggggctgacgtggccgttaacctctcacatg 28248099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 579 - 713
Target Start/End: Original strand, 34400628 - 34400762
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | | | | | |||||| ||| ||||||||| ||  ||||  ||  ||     
T  34400628 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacccagagttcaaaatcccccaaatttcttccatgaattgatgtcaat 34400727  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    |||||||||||||||||||| ||| ||||||||||    
T  34400728 gttcttccccaattcaaaaaacttaaaaccctaat 34400762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 579 - 713
Target Start/End: Original strand, 42517877 - 42518011
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| || |||||| ||  ||||  ||  ||     
T  42517877 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatcccccaattttcttccatgaattgatgtcaat 42517976  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    |||||||||||||||||||| ||| ||||||||||    
T  42517977 gttcttccccaattcaaaaaacttaaaaccctaat 42518011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 585 - 713
Target Start/End: Complemental strand, 15373683 - 15373554
Alignment:
Q  585 tcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggta-acgttct 683  Q
    |||||| ||| | |||||||||||||||||||||  ||||| | ||||||||| || || ||  || ||||||| | ||||||| ||||||  | |||||    
T  15373683 tcttccccaattgtataaaattggaaccctaattacacaatctataatctacattctaatatcacctaaatttcctccaataataagtggtccaagttct 15373584  T
Q  684 tccccaattcaaaaagcttcaaaccctaat 713  Q
    ||||||||||||||| ||| ||||||||||    
T  15373583 tccccaattcaaaaaacttaaaaccctaat 15373554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 680 - 840
Target Start/End: Original strand, 40150664 - 40150825
Alignment:
Q  680 ttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaag-caaaattgttcaatttga 778  Q
    ||||||||| |||| |||| |||||||||||| |        ||||||||| |||| |||||||  ||||||||||||||  ||||||||||||  ||||    
T  40150664 ttcttcccctattctaaaaacttcaaaccctattttgttttcattgaatccaaaatccaaaatcttcaaaatttcttcaaatcaaaattgttcagattga 40150763  T
Q  779 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctt 840  Q
    |||| |||||||| | |||||  ||| |||||||| ||||| | ||||||||| || |||||    
T  40150764 atctaaaatgatgggtggtggccgtatgggcaaaaacaattctcaaagtcaagtttcatctt 40150825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 579 - 791
Target Start/End: Complemental strand, 40152346 - 40152135
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||| | ||||| |||||||||| ||||| |||||| |||| | | ||||||  ||||||||  ||| |||||||| || ||||||     |||    
T  40152346 gctctttctttcccaaatctataaaattgaaacccaaatttttcaatctctcatctacggtccaaaatctccacaatttcttccattaattaac---aac 40152250  T
Q  679 g--ttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaattt 776  Q
       |||||||||||||| |||| ||| ||||||||||        |||||||||||||| |||||||   ||||||||||||| ||||||||||||  ||    
T  40152249 catttcttccccaattctaaaaacttaaaaccctaatttgatttgattgaatccgaaatccaaaatcctgaaaatttcttcaaccaaaattgttcagatt 40152150  T
Q  777 gaatctgaaatgatg 791  Q
    |||||  ||||||||    
T  40152149 gaatccaaaatgatg 40152135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 580 - 712
Target Start/End: Complemental strand, 17697903 - 17697776
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 679  Q
    ||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||||||||||| ||| |||| |  |||    |    
T  17697903 ctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatccccaaaatttc-ttccataaatgatgg----g 17697809  T
Q  680 ttcttccccaattcaaaaagcttcaaaccctaa 712  Q
    ||||||||||||||||||| ||| |||||||||    
T  17697808 ttcttccccaattcaaaaaacttaaaaccctaa 17697776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 579 - 713
Target Start/End: Original strand, 19907036 - 19907170
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||| |||||||||||| | ||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  ||     
T  19907036 gctctttcttccccaaatatataaattcggaaccctaatgttataatttgttacctagagttcaaaatcccccaaatttcttacatgaattgatgtcaat 19907135  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    ||||||| |||||||||||| ||| ||||||||||    
T  19907136 gttcttcaccaattcaaaaaacttaaaaccctaat 19907170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 746 - 864
Target Start/End: Complemental strand, 42003108 - 42002990
Alignment:
Q  746 caaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagc 845  Q
    ||||||||||| |||||||| | || || |  |||||||||||||  ||||||||  || ||| |||| |  ||||||||||| ||||| ||||| ||||    
T  42003108 caaaatttcttgaagcaaaactattgaaataaaatctgaaatgatagggggtgggaatatgggaaaaaactgttatgaaagtcgagcttcatcttcaagc 42003009  T
Q  846 tccatgtttaatggtgatg 864  Q
    |||| ||||||||||||||    
T  42003008 tccaagtttaatggtgatg 42002990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 312 - 481
Target Start/End: Complemental strand, 42880903 - 42880735
Alignment:
Q  312 agagtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatatg 411  Q
    |||||||||||||||||| |||  |||||||| || || ||||| ||| ||||||  |||||||||||||||| || ||| ||  | ||||||||| ||     
T  42880903 agagtgaatcatcaacttcgtccctgaatttt-tacgggtcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccataaatttgttaaatt 42880805  T
Q  412 tcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 481  Q
    |||||||| ||||||  | | | |||  |||| |||||||  || || ||| ||||||||||||||||||    
T  42880804 tcaatcaagttagtccttttgttcaaacggagcgttaacgaggctgatgtggccgttaacctctcacatg 42880735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 409 - 481
Target Start/End: Original strand, 11312946 - 11313018
Alignment:
Q  409 atgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 481  Q
    |||||||||||||||||| |||  ||||||||||||||||||| ||| ||| |   |||||||||||||||||    
T  11312946 atgtcaatcaatttagtccctccgtccaattggagtgttaacgatgctgacatagtcgttaacctctcacatg 11313018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 585 - 713
Target Start/End: Complemental strand, 41708225 - 41708097
Alignment:
Q  585 tcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttctt 684  Q
    |||||| ||| | |||||||||||||||||||||  ||||| | ||||||||| || || ||  || ||||||| | | ||||| ||||||   ||||||    
T  41708225 tcttccccaattgtataaaattggaaccctaattacacaatctataatctacattctaatatcacctaaatttcctcccataataagtggtccagttctt 41708126  T
Q  685 ccccaattcaaaaagcttcaaaccctaat 713  Q
    || ||||||||||| ||| ||||||||||    
T  41708125 cctcaattcaaaaaacttaaaaccctaat 41708097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 370 - 481
Target Start/End: Original strand, 11021589 - 11021700
Alignment:
Q  370 aattatgcgaaatattaaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgtta 469  Q
    ||||||||||||||| || ||| ||  ||||||||||| ||||||||||| ||||||  ||  | |||  |||| |||||||| || |||||| ||||||    
T  11021589 aattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggccgtta 11021688  T
Q  470 acctctcacatg 481  Q
    | ||||||||||    
T  11021689 aactctcacatg 11021700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 397 - 503
Target Start/End: Original strand, 59920 - 60026
Alignment:
Q  397 tgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcaga 496  Q
    ||||||||| |||| ||||||||||||||| ||   |||| ||||   |||| |||||  ||| || |  |||||||||||||||||||||||| |||||    
T  59920 tgaatttgtcatatctcaatcaatttagtccctacgtccatttgggacgttaccggtgatgacatggctattaacctctcacatgggttgccatgtcaga 60019  T
Q  497 tgccaca 503  Q
    |||||||    
T  60020 tgccaca 60026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 599 - 713
Target Start/End: Original strand, 26581316 - 26581430
Alignment:
Q  599 ataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaa 698  Q
    |||| ||| ||| |||||||||| ||| ||| | ||| | | |||||||||||||||||||| || |||||  ||  |||| | ||||||||||||||||    
T  26581316 ataagattagaatcctaattttataatttgtcacctagagttcaaaattcccaaaatttcttccattaattgatgacaacgctgttccccaattcaaaaa 26581415  T
Q  699 gcttcaaaccctaat 713  Q
     ||||||| ||||||    
T  26581416 acttcaaaacctaat 26581430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 518
Target Start/End: Complemental strand, 7745363 - 7745159
Alignment:
Q  313 gagtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatatgt 412  Q
    |||||||||||||| || ||| ||||||||  |||| ||| |  |||||||||| | |||| |||||||||| || || ||  |||||||||| | ||||    
T  7745363 gagtgaatcatcaatttcgtcattgaatttg-taagcatcagccaaaatcgtccccaaattttgcgaaatatcaatttcgttcttgaatttgtaaaatgt 7745265  T
Q  413 caatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcagag 512  Q
    ||||||||||  ||  || |   || ||  |||||||||| || ||| ||  | ||||||||||||||||  |||||| ||||| |||||| |||||| |    
T  7745264 caatcaatttcatccttccaattaactgaggtgttaacggagctgacatggtctttaacctctcacatggactgccatgtcagaagccacacaagcaggg 7745165  T
Q  513 actaat 518  Q
    ||||||    
T  7745164 actaat 7745159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 579 - 660
Target Start/End: Original strand, 16377082 - 16377163
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctt 660  Q
    |||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||||| | |||||| | | |||||||||    
T  16377082 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgttacctacagttcaaaatcctctaaatttctt 16377163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 313 - 481
Target Start/End: Complemental strand, 37418860 - 37418693
Alignment:
Q  313 gagtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatatgt 412  Q
    ||||||||||||||||| ||  |||||||||  | || ||||  ||| ||||||| ||||||||| |||||| ||  || ||  | ||||||||| ||||    
T  37418860 gagtgaatcatcaacttcgtacttgaattttc-acgggtcggccaaattcgtcctttaattatgcaaaatatcaatctaatccctaaatttgttaaatgt 37418762  T
Q  413 caatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 481  Q
    ||||||| ||||||| ||| | |||   ||| |||||||  || ||| || ||||||||||||||||||    
T  37418761 caatcaagttagtcattctgttcaaacagagcgttaacgtggctgacatggccgttaacctctcacatg 37418693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 580 - 635
Target Start/End: Complemental strand, 4047758 - 4047703
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatcta 635  Q
    ||||||||||| ||||| |||||||||| ||||||||||||| ||| ||| |||||    
T  4047758 ctctttcttccccaaatctataaaattgaaaccctaattttataatttgtcatcta 4047703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 580 - 621
Target Start/End: Complemental strand, 161854 - 161813
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaatttta 621  Q
    ||||||||||| |||||||| ||| |||||||||||||||||    
T  161854 ctctttcttccccaaatataaaaatttggaaccctaatttta 161813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 580 - 625
Target Start/End: Complemental strand, 2359587 - 2359542
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaattttacaat 625  Q
    ||||||||||| ||||| ||| |||||||||||||||||| |||||    
T  2359587 ctctttcttccccaaatctattaaattggaaccctaatttgacaat 2359542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 128; Significance: 1e-65; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 583 - 883
Target Start/End: Complemental strand, 5784666 - 5784366
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  5784666 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 5784567  T
Q  683 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 782  Q
    |||||||| |||||||  | |||||||||||        |||||||| |||| ||||||||  |||||||  ||||||||||| |||| || ||||||||    
T  5784566 ttccccaaatcaaaaaattgcaaaccctaattttttttaattgaatctgaaaatcaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 5784467  T
Q  783 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 882  Q
     ||||||||||||||||   || || |||||  |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  5784466 aaaatgatgaggggtggtcatatggacaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 5784367  T
Q  883 g 883  Q
    |    
T  5784366 g 5784366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 580 - 889
Target Start/End: Original strand, 42558248 - 42558546
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 679  Q
    ||||||||||| ||||| || ||||||||||||||||||||||||| ||| |||||          |  |||||| ||||| || |||||| ||   |||    
T  42558248 ctctttcttccccaaatctagaaaattggaaccctaattttacaatctgtcatcta----------tctccaaaaattcttccattaattaatgacgacg 42558337  T
Q  680 ttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaa 779  Q
    ||||| |||||||| |||| ||||||||||||||        ||||||||| |||| |||||||  ||||||||||||||||| |||||||||  |||||    
T  42558338 ttctttcccaattctaaaaacttcaaaccctaat-tcttttgattgaatccaaaatccaaaatccgcaaaatttcttcaagcataattgttcagattgaa 42558436  T
Q  780 tctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaat 879  Q
    |||||||||||| | |||||| ||| |||||||| || |||| ||| |  ||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  42558437 tctgaaatgatgggtggtgggcgtatgggcaaaatcagttatcaaatttgagcttcatcttcaagctccatgtttaatggtgatgtgagagtgcttgaat 42558536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 583 - 813
Target Start/End: Complemental strand, 51123342 - 51123115
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    |||||||||||||| ||||||||||||||||||||||||||||   ||||| |||||||||||||||||||| ||||| |||||||||| ||||||||||    
T  51123342 tttcttcctcaaatgtataaaattggaaccctaattttacaatcattaatccacactccaaaattcccaaaaattcttccaataattagaggtaacgttc 51123243  T
Q  683 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 782  Q
    |||||||||| ||| | | ||||||||||||        ||||||||||||    |||||| |||||||| ||||||  |||| ||||  | ||||||||    
T  51123242 ttccccaattgaaataacctcaaaccctaat--tttttgattgaatccgaatcaaaaaatccccaaaattccttcaaataaaactgttgtaattgaatct 51123145  T
Q  783 gaaatgatgaggggtgggtgtaagggcaaaa 813  Q
    ||||||||| |||||||||||| ||||||||    
T  51123144 gaaatgatg-ggggtgggtgtatgggcaaaa 51123115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 583 - 883
Target Start/End: Original strand, 11152837 - 11153136
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    |||||||| ||||| |||||||||||||||||||||||||||| | ||||||||||||||||||  ||||| |||||| |||||||||  ||| | ||||    
T  11152837 tttcttccccaaatgtataaaattggaaccctaattttacaatgtttaatctacactccaaaatctccaaattttcttccaataattaagggtcatgttc 11152936  T
Q  683 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 782  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||   ||||||  |||||||  ||||||||||| |||| || ||||||||    
T  11152937 ttccccaaatcaaaaaattgcaaaccctaattttttttaattgaatctgaaaactaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 11153036  T
Q  783 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 882  Q
     |||||||| |||||||   || ||||||||  |  ||| |||||||| ||| ||||| |  ||||||||||||||||||||||||| ||||||| ||||    
T  11153037 aaaatgatg-ggggtggtcatatgggcaaaaagagctatcaaagtcaaacttcatcttcatcctccatgtttaatggtgatgtgagaatgcttgagtgtt 11153135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 596 - 713
Target Start/End: Complemental strand, 25172818 - 25172701
Alignment:
Q  596 tatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaa 695  Q
    ||||||||||| |||||||||||||||||| | |||| ||| |||||||||  |||||||||||| ||||||||||||||||||||||||||||||| ||    
T  25172818 tatataaaattagaaccctaattttacaatctttaatgtacgctccaaaatctccaaaatttcttccaataattagtggtaacgttcttccccaatttaa 25172719  T
Q  696 aaagcttcaaaccctaat 713  Q
    |||  |||||||||||||    
T  25172718 aaaaattcaaaccctaat 25172701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 579 - 889
Target Start/End: Complemental strand, 31803500 - 31803190
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||| ||| | ||||||||||||||  |||||  ||||| || ||||||||||| | |||    |||||||| | ||||||| ||||||       
T  31803500 gctctttcttccccaattgtataaaattggaacgttaattacacaatctgcaatctacactctataatcatgaaaatttcctccaataataagtggttca 31803401  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnn-attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttg 777  Q
    ||||| |||||||||||||| ||||||||||||||         | |||||| ||||  || ||||  ||||||||||| |||||||| | || || |||    
T  31803400 gttctgccccaattcaaaaaacttcaaaccctaatttttttcgtagtgaatctgaaagccagaatcctcaaaatttcttgaagcaaaactattgaaattg 31803301  T
Q  778 aatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttga 877  Q
    |||||||||||||| ||||||||  || ||  |||| |  |||||||||||||| || ||||| |||||||| ||||||| ||| |||||||||||||||    
T  31803300 aatctgaaatgatgtggggtgggaatatggaaaaaa-cggttatgaaagtcaagtttcatcttcaagctccaagtttaatagtgttgtgagagtgcttga 31803202  T
Q  878 atgttgatgtcc 889  Q
    |||||| |||||    
T  31803201 atgttggtgtcc 31803190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 579 - 889
Target Start/End: Original strand, 46637056 - 46637365
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||| ||| | ||||||||||||||| |||||  ||||| || ||||||||||| | |||    |||||||| | ||||||| ||||||       
T  46637056 gctctttcttccccaatt-tataaaattggaaccttaattacacaatctgcaatctacactctataatcatgaaaatttcctccaataataagtggttca 46637154  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnn-attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttg 777  Q
    ||||| |||||||||||||| ||||||||||||||         | |||||  ||||  || ||||  ||||||||||| |||||||| | || || |||    
T  46637155 gttctaccccaattcaaaaaacttcaaaccctaatttttttcgtagtgaatttgaaagccagaatcctcaaaatttcttgaagcaaaactattgaaattg 46637254  T
Q  778 aatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttga 877  Q
    ||||| |||||||| ||||||||  || ||  |||| |  ||||||||||||||||| ||||| |||||||| ||||||||||| |||||||||||||||    
T  46637255 aatctaaaatgatgtggggtgggaatatggaaaaaa-cggttatgaaagtcaagcttcatcttcaagctccaagtttaatggtgttgtgagagtgcttga 46637353  T
Q  878 atgttgatgtcc 889  Q
    |||||| |||||    
T  46637354 atgttggtgtcc 46637365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 579 - 864
Target Start/End: Original strand, 45379374 - 45379658
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    ||||| |||||| ||| | ||||||||| |||||||||||  ||||| || |||||||| || |||||  || ||||||| | ||||||| ||||||       
T  45379374 gctctgtcttccccaattgtataaaattagaaccctaattacacaatttgcaatctacattctaaaatcacctaaatttcctccaataataagtggtcta 45379473  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 778  Q
    |||||||||||||||| ||| ||| ||||||||||        |||||||| ||||  |||||||  ||||||||||| |||||||| | || || ||||    
T  45379474 gttcttccccaattcagaaaacttgaaaccctaatttttttgtattgaatctgaaagccaaaatccacaaaatttcttgaagcaaaactattgaaattga 45379573  T
Q  779 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 864  Q
    ||||||||||| | ||||||||  || ||| ||||    ||||||||||| ||||| |||||||||||||| |||||| |||||||    
T  45379574 atctgaaatgaag-ggggtgggaatatgggaaaaaattgttatgaaagtcgagcttcatctttaagctccaagtttaacggtgatg 45379658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 585 - 864
Target Start/End: Complemental strand, 44159088 - 44158807
Alignment:
Q  585 tcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttctt 684  Q
    |||||| ||| | |||||||||| |||||| |||  ||||| || |||||||| || |||||  || ||||||| | ||||||| |||||| | ||||||    
T  44159088 tcttccccaattgtataaaattgaaaccctgattacacaatctgcaatctacattctaaaatcacctaaatttcctccaataataagtggtcaagttctt 44158989  T
Q  685 ccccaattcaaaaagcttcaaaccctaatannnnnnn--attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 782  Q
    |||||||||||||| ||| ||||||||||          |||||||| ||||  |||||||  ||||||||||| |||||||| | || || ||||||||    
T  44158988 ccccaattcaaaaaacttgaaaccctaattttttttcgtattgaatctgaaagccaaaatccacaaaatttcttgaagcaaaactattgaaattgaatct 44158889  T
Q  783 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 864  Q
    ||||||| | ||||||||  || ||| ||||  | ||||||||||| ||||| ||||| ||||| || ||||||||||||||    
T  44158888 gaaatgaaggggggtgggattatgggaaaaaatagttatgaaagtcgagcttcatcttcaagcttcaagtttaatggtgatg 44158807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 379 - 573
Target Start/End: Original strand, 42558022 - 42558216
Alignment:
Q  379 aaatattaaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgt-gaccgttaacctctca 477  Q
    ||||||| ||||||||| ||||||||| | || ||||||||||||||| ||   || | |||| ||||||||||||| || || ||||||||||||||||    
T  42558022 aaatattcaattagtctctgaatttgtcaaatttcaatcaatttagtccctacgtcaagttggggtgttaacggtgctgatgtggaccgttaacctctca 42558121  T
Q  478 catgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatttgtagaaaat 573  Q
    || || ||| ||| ||| |||||||| ||||| | |||||| ||| ||| ||||| ||||||| |||||||  ||||| |||||||||||||||||    
T  42558122 caaggcttgtcatgtcaaatgccacacaagcataaactaatttggccgaaagtga-caaaattgccaaggacgaaattgattgatttgtagaaaat 42558216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 579 - 864
Target Start/End: Complemental strand, 42136045 - 42135761
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    ||||| |||||| ||| | ||||||||||||| |||||||  ||||| || |||||||| || |||||  || ||||||  | ||||||| |||| |       
T  42136045 gctctatcttccccaattgtataaaattggaatcctaattacacaatctgcaatctacattctaaaatcacctaaattttctccaataataagtgctcca 42135946  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 778  Q
    |||||||||||||||||||| ||| ||||| ||||        |||||||| |||| |||||||   ||||||||||| |||||||| | || || ||||    
T  42135945 gttcttccccaattcaaaaaacttgaaacc-taattttttcgtattgaatctgaaagtcaaaattcacaaaatttcttgaagcaaaactattgaaattga 42135847  T
Q  779 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 864  Q
    ||||||||||| | ||||||||  || ||| ||||    ||||||||||| ||||| ||||| |||||||| ||||||||||||||    
T  42135846 atctgaaatgaaggggggtgggaatatgggaaaaaattgttatgaaagtcgagcttcatcttcaagctccaagtttaatggtgatg 42135761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 397 - 563
Target Start/End: Complemental strand, 43870322 - 43870156
Alignment:
Q  397 tgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcaga 496  Q
    ||||||||| |||| |||||||| ||||||  |   |||| |||| | ||||||||||  |||||| ||||||||||||||||||||||||||| |||||    
T  43870322 tgaatttgtcatatctcaatcaaattagtccttacgtccatttggggcgttaacggtgatgacgtggccgttaacctctcacatgggttgccatgtcaga 43870223  T
Q  497 tgccacagaagcagagactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatt 563  Q
    || || | |||||| ||||||  |||| || |||||| ||||||||||||||  ||||| |||||||    
T  43870222 tgtcatataagcagggactaaattggttgatagtgacaaaaatttccaaggacgaaattgattgatt 43870156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 435 - 574
Target Start/End: Complemental strand, 25173005 - 25172876
Alignment:
Q  435 caattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgacc 534  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||          ||||||| |||| |||||||||||||| ||  ||| |||||||    
T  25173005 caattggagtgttaacggtgctgacgtgaccgttaacctctcacatg----------tcagatgtcacataagcagagactaatttgaccgatagtgacc 25172916  T
Q  535 aaaatttccaaggatcaaattaattgatttgtagaaaatg 574  Q
    ||||||||||||||  || || ||||||||| ||||||||    
T  25172915 aaaatttccaaggacgaatttgattgatttgcagaaaatg 25172876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 579 - 711
Target Start/End: Complemental strand, 6576906 - 6576774
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||| ||| | |||||||||||||||||||||  ||||| || ||||||||||| |||||  || ||||||| | ||||||| ||||||       
T  6576906 gctctttcttccccaattgtataaaattggaaccctaattaaacaatctgcaatctacactctaaaatcacctaaatttcctccaataataagtggtcca 6576807  T
Q  679 gttcttccccaattcaaaaagcttcaaacccta 711  Q
    ||| || ||||||||||||| ||||||||||||    
T  6576806 gttttttcccaattcaaaaaacttcaaacccta 6576774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 746 - 889
Target Start/End: Original strand, 18183063 - 18183205
Alignment:
Q  746 caaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagc 845  Q
    ||||||||||| |||||||| | || || ||| ||||||||||||| ||||||||   | ||| |||| || ||||||||||| || || ||||| ||||    
T  18183063 caaaatttcttgaagcaaaactattgaaattggatctgaaatgatg-ggggtgggaacatgggaaaaaacagttatgaaagtcgagtttcatcttcaagc 18183161  T
Q  846 tccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 889  Q
    |||| |||||||||||||||||||  |||||||||||| |||||    
T  18183162 tccaagtttaatggtgatgtgagaaagcttgaatgttggtgtcc 18183205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 579 - 864
Target Start/End: Original strand, 35478378 - 35478660
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||||||| | | |||||||| ||||||||||  ||||| |   |||||||||| |||||  || ||||||| | ||||||| ||||||       
T  35478378 gctctttcttcctcaattgtttaaaattgaaaccctaattacacaatct---atctacactctaaaatcacctaaatttcctccaataataagtggttta 35478474  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 778  Q
    ||| |||||||||||||||| ||||||||||||||        ||||||||  |||  |||||||  ||||| ||||| |||||||| | || || |  |    
T  35478475 gtttttccccaattcaaaaaacttcaaaccctaattttttcgtattgaatcttaaaaccaaaatcctcaaaacttcttgaagcaaaactattgaaataaa 35478574  T
Q  779 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 864  Q
    |||  |||||||| ||||||||  || ||| ||||    ||||||||||| ||||| ||||| ||||| || ||||||||||||||    
T  35478575 atccaaaatgatggggggtgggaatatgggaaaaaattgttatgaaagtcgagcttcatcttgaagcttcaagtttaatggtgatg 35478660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 579 - 713
Target Start/End: Original strand, 50554500 - 50554634
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| ||| |||||| ||| ||||||||| ||  ||||  ||  ||     
T  50554500 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgttacctagacttcaaaatcccccaaatttcttacatgaattgatgtcaat 50554599  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    |||||||||||||||||||| ||| ||||||||||    
T  50554600 gttcttccccaattcaaaaaacttaaaaccctaat 50554634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 579 - 710
Target Start/End: Original strand, 33679549 - 33679680
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||||||| | || ||||||||||||||||||  ||||| || ||| ||||||| |||||  || ||||||| | ||||||| | | ||       
T  33679549 gctctttcttcctcaattgtacaaaattggaaccctaattacacaatctgcaatatacactctaaaatcacctaaatttcctccaataataactagtcca 33679648  T
Q  679 gttcttccccaattcaaaaagcttcaaaccct 710  Q
    |||||||||||||||||||| |||||||||||    
T  33679649 gttcttccccaattcaaaaaacttcaaaccct 33679680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 314 - 481
Target Start/End: Original strand, 46636766 - 46636932
Alignment:
Q  314 agtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatatgtc 413  Q
    |||||||||||||||| |||| ||||||||  | || |||| |||  |||||||  ||||||||||||||| || ||| | | ||||||||||| |||||    
T  46636766 agtgaatcatcaacttcgtctctgaattttc-acgggtcggctaacttcgtccttcaattatgcgaaatatcaatttaatttctgaatttgttaaatgtc 46636864  T
Q  414 aatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 481  Q
    |||||| ||||||  ||| | |||  |||| |||||||| || |||||| |||||||||| |||||||    
T  46636865 aatcaagttagtccttctgttcaaacggagcgttaacggggctgacgtggccgttaacctttcacatg 46636932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 579 - 713
Target Start/End: Original strand, 31237139 - 31237273
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||| |||||||||||  ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| || |||||  ||  ||     
T  31237139 gctctttcttccccaaatatataattttggaaccctaatgttataatttgttacctagagttcaaaatcccccaaatttcttccattaattgatgtcaat 31237238  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    |||||||||||||||||||| ||| ||||||||||    
T  31237239 gttcttccccaattcaaaaaacttaaaaccctaat 31237273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 580 - 713
Target Start/End: Original strand, 18058121 - 18058254
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 679  Q
    ||||||||||| ||||| ||||||||||||||| |||||||||||| ||| ||||| | | |||||| | ||||| |||||  | |||||  ||  |||     
T  18058121 ctctttcttccccaaatttataaaattggaaccttaattttacaatttgtcatctagagttcaaaatcctcaaaacttcttcaattaattgatgacaaca 18058220  T
Q  680 ttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    |||||||||||||| |||| ||||||| ||||||    
T  18058221 ttcttccccaattctaaaaacttcaaaacctaat 18058254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 397 - 470
Target Start/End: Complemental strand, 34041836 - 34041763
Alignment:
Q  397 tgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaa 470  Q
    ||||||||| | |||||||| |||||||||  ||| ||||||||||||||||||||||| ||||||||||||||    
T  34041836 tgaatttgtaaaatgtcaataaatttagtccatctgtccaattggagtgttaacggtgctgacgtgaccgttaa 34041763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 313 - 481
Target Start/End: Complemental strand, 44159385 - 44159218
Alignment:
Q  313 gagtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatatgt 412  Q
    ||||||||||||||||| |||  ||||||||   || |||||| ||  ||||||  ||||||||| |||||| || ||| |   ||||||||||| ||||    
T  44159385 gagtgaatcatcaacttcgtccctgaattttcacag-atcggtcaatttcgtcccttaattatgcaaaatatcaatttaattcctgaatttgttaaatgt 44159287  T
Q  413 caatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 481  Q
    ||||||| ||||||| ||| | |||  | || |||||||| || |||||||||||||||||||||||||    
T  44159286 caatcaagttagtcattctgttcaaacgaagcgttaacggggctgacgtgaccgttaacctctcacatg 44159218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 583 - 713
Target Start/End: Complemental strand, 15106116 - 15105986
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    |||||||| |||||||||||| |||||| |||||| ||| |||  || | ||||| | |||||| ||||||||||||| ||  ||||  ||  || ||||    
T  15106116 tttcttccccaaatatataaatttggaatcctaatgttataattcgtcacctacagttcaaaatccccaaaatttcttacatgaattgatgccaaagttc 15106017  T
Q  683 ttccccaattcaaaaagcttcaaaccctaat 713  Q
    |||||||||||||||| ||| ||||||||||    
T  15106016 ttccccaattcaaaaaacttaaaaccctaat 15105986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 580 - 713
Target Start/End: Original strand, 6817200 - 6817333
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 679  Q
    ||||||||||| |||||||||||| || |||||||||| ||| ||| ||| | ||| | | ||||||||| |||||||||| ||  ||||  ||  || |    
T  6817200 ctctttcttccccaaatatataaatttagaaccctaatgttataatttgttacctagagttcaaaattcctaaaatttcttccatgaattgatgtcaatg 6817299  T
Q  680 ttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    ||||||||||||||||||  ||| ||||||||||    
T  6817300 ttcttccccaattcaaaagacttaaaaccctaat 6817333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 313 - 482
Target Start/End: Complemental strand, 42136335 - 42136167
Alignment:
Q  313 gagtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatatgt 412  Q
    ||||||||||||||||| ||   | |||||| || |||||||| ||  ||||||| |||||||||||||||| || ||| ||  ||||||||||| ||||    
T  42136335 gagtgaatcatcaacttcgttcctaaatttt-tatggatcggtcaacttcgtcctttaattatgcgaaatatcaatttaatccctgaatttgttaaatgt 42136237  T
Q  413 caatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgg 482  Q
    ||||||| ||||||  ||| | |||  |||| |||||| | || ||||||  ||||| ||||||||||||    
T  42136236 caatcaagttagtccttctgttcaaacggagcgttaacagggctgacgtggtcgttatcctctcacatgg 42136167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 313 - 481
Target Start/End: Complemental strand, 5784958 - 5784791
Alignment:
Q  313 gagtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatatgt 412  Q
    ||||||||||||||||| |||  ||||||||  | || ||||| ||  ||||||   ||||||||||||||| || ||| ||  ||||||||||| ||||    
T  5784958 gagtgaatcatcaacttcgtccctgaattttc-acgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgt 5784860  T
Q  413 caatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 481  Q
    ||||||| ||||||  ||  | |||  |||| |||||||| || |||||||||||||| ||||||||||    
T  5784859 caatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtgaccgttaaactctcacatg 5784791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 361 - 481
Target Start/End: Complemental strand, 31803744 - 31803624
Alignment:
Q  361 tcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacg 460  Q
    |||||||  ||||||||||||||| || ||| ||  ||||||||||| ||||||||||| ||||||  ||| | |||  |||| |||||||| || ||||    
T  31803744 tcgtccttcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtccttctgttcaaacggagcgttaacggggctgacg 31803645  T
Q  461 tgaccgttaacctctcacatg 481  Q
    || |||||||||| |||||||    
T  31803644 tggccgttaacctttcacatg 31803624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 313 - 481
Target Start/End: Original strand, 33679259 - 33679426
Alignment:
Q  313 gagtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatatgt 412  Q
    |||||||||||||| ||||||  |||||||| || || || |  ||| ||||||   ||||||||||||||| || ||| || |||||||||||| ||||    
T  33679259 gagtgaatcatcaattttgtccatgaatttt-tacgggtcagccaaattcgtccctcaattatgcgaaatatcaatttaatccttgaatttgttaaatgt 33679357  T
Q  413 caatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 481  Q
    ||||||| ||||||  ||||| |||  |||| ||||||   |  |||||| ||||||||||||||||||    
T  33679358 caatcaagttagtccttctattcaaacggagcgttaacaaggttgacgtggccgttaacctctcacatg 33679426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 630 - 712
Target Start/End: Original strand, 18180818 - 18180900
Alignment:
Q  630 aatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagcttcaaaccctaa 712  Q
    |||||||||||||||||  |||||||||| | || |||| ||||||    ||||||||||||||||||| |||||||||||||    
T  18180818 aatctacactccaaaatcaccaaaatttcctccagtaataagtggtccgattcttccccaattcaaaaaacttcaaaccctaa 18180900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 580 - 713
Target Start/End: Original strand, 45045232 - 45045365
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 679  Q
    ||||||||||| |||||||||||| ||||||||||||| ||| ||| | | |  || | | |||||| ||| ||||||||| ||  ||||  ||  || |    
T  45045232 ctctttcttccccaaatatataaatttggaaccctaatgttataatttatcacatagagttcaaaatcccccaaatttcttccatgaattgatgtcaatg 45045331  T
Q  680 ttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    ||||||||||||||||||| ||| ||||||||||    
T  45045332 ttcttccccaattcaaaaaacttaaaaccctaat 45045365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 357 - 518
Target Start/End: Complemental strand, 51123603 - 51123442
Alignment:
Q  357 aaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgca 456  Q
    ||||| |||||| |||| |||||||||| || || |||  ||||||| | | |||||||||||||| |||  || |   || ||| |||||||||| ||     
T  51123603 aaaattgtcctcaaattttgcgaaatatcaatttcgtccctgaatttataaaatgtcaatcaatttcgtccttccaattaactggggtgttaacggagct 51123504  T
Q  457 gacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcagagactaat 518  Q
    |||||| |||||||||||||||||||  |||||| ||| |  ||||| |||||| |||||||    
T  51123503 gacgtggccgttaacctctcacatggactgccatgtcaaacaccacacaagcagggactaat 51123442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 445 - 517
Target Start/End: Complemental strand, 51546285 - 51546213
Alignment:
Q  445 gttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcagagactaa 517  Q
    ||||||||||  |||||| | |||||| ||||| |||||||||||| |||||||||||| |||||| ||||||    
T  51546285 gttaacggtgatgacgtggctgttaacatctcagatgggttgccatgtcagatgccacataagcagggactaa 51546213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 598 - 713
Target Start/End: Complemental strand, 27952282 - 27952167
Alignment:
Q  598 tataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaa 697  Q
    |||||||||| ||||||||||  ||||| | ||||||||| || || ||  |  ||||||| | ||||||| ||||||   |||||||||||||||||||    
T  27952282 tataaaattgtaaccctaattacacaatttttaatctacattctaatatcacttaaatttcctccaataataagtggtccagttcttccccaattcaaaa 27952183  T
Q  698 agcttcaaaccctaat 713  Q
    | ||| ||||||||||    
T  27952182 aacttaaaaccctaat 27952167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 579 - 713
Target Start/End: Complemental strand, 2870845 - 2870712
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||| | ||||||||| || ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  ||     
T  2870845 gctctttctttcccaaatatatcaatttggaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatgtcaat 2870746  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    |||||||||||||||||||| ||| ||||||||||    
T  2870745 gttcttccccaattcaaaaa-cttaaaaccctaat 2870712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 579 - 713
Target Start/End: Original strand, 3012175 - 3012309
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||| |||||||||||| ||||||||||||| ||  ||| ||| | ||| | | ||||||   | ||||||||| ||  ||||  ||  ||     
T  3012175 gctctttcttccccaaatatataaatttggaaccctaatgttctaatttgtcacctatagttcaaaatctaccaaatttcttccatgaattgatgtcaat 3012274  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    |||||||||||||||||||| ||| ||||||||||    
T  3012275 gttcttccccaattcaaaaaacttaaaaccctaat 3012309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 746 - 864
Target Start/End: Original strand, 33679696 - 33679814
Alignment:
Q  746 caaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagc 845  Q
    ||||||||||| |||||||| | || || |  |||| ||||||||| ||||||||  ||  || |||| |  ||||||||||| ||||| ||||| ||||    
T  33679696 caaaatttcttgaagcaaaactattgaaataaaatccgaaatgatggggggtgggaatataggaaaaaactgttatgaaagtcgagcttcatcttcaagc 33679795  T
Q  846 tccatgtttaatggtgatg 864  Q
    |||| ||||||||||||||    
T  33679796 tccaagtttaatggtgatg 33679814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 473 - 571
Target Start/End: Complemental strand, 35009608 - 35009511
Alignment:
Q  473 tctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatttgtagaaa 571  Q
    ||||||| || || |||| | |||||||||| |||||||||||||| ||||||| ||||| ||||||||| || ||  ||||| ||||||||| |||||    
T  35009608 tctcacaaggctttccatgttagatgccacacaagcagagactaatttggtcgaaagtga-caaaatttcgaatgactaaattgattgatttgcagaaa 35009511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 470 - 573
Target Start/End: Original strand, 3369587 - 3369689
Alignment:
Q  470 acctctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatttgtaga 569  Q
    |||||||||| || ||| ||| ||||||| |||| |||||||||||||| |||  || | ||| |||||||||||||||  ||||| ||||||||  |||    
T  3369587 acctctcacaaggcttgtcatgtcagatgtcacacaagcagagactaatttggctgaaaatga-caaaatttccaaggactaaattgattgatttacaga 3369685  T
Q  570 aaat 573  Q
    ||||    
T  3369686 aaat 3369689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 369 - 480
Target Start/End: Original strand, 45379140 - 45379251
Alignment:
Q  369 taattatgcgaaatattaaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgtt 468  Q
    |||||||||||||||| || ||| ||  | ||||||||| ||||||||||| ||||||  ||| | |||  ||||  ||||||| |  |||||| |||||    
T  45379140 taattatgcgaaatatcaatttaatccctaaatttgttaaatgtcaatcaagttagtccttctgttcaaacggagcattaacggggttgacgtggccgtt 45379239  T
Q  469 aacctctcacat 480  Q
    ||||||||||||    
T  45379240 aacctctcacat 45379251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 583 - 621
Target Start/End: Original strand, 33599542 - 33599580
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaatttta 621  Q
    |||||||| |||||||||||| |||||||||||||||||    
T  33599542 tttcttccacaaatatataaatttggaaccctaatttta 33599580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 124; Significance: 3e-63; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 583 - 883
Target Start/End: Complemental strand, 39922806 - 39922506
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  39922806 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 39922707  T
Q  683 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 782  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || ||||||||    
T  39922706 ttccccaaatcaaaaaattacaaaccctaattttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 39922607  T
Q  783 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 882  Q
     |||||||| | |||||   || ||||||||| |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  39922606 aaaatgatgggaggtggtcatatgggcaaaaggagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 39922507  T
Q  883 g 883  Q
    |    
T  39922506 g 39922506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 583 - 883
Target Start/End: Complemental strand, 39084951 - 39084651
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    |||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  39084951 tttcttccccaaatatataaaattggaactctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 39084852  T
Q  683 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 782  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || ||||||||    
T  39084851 ttccccaaatcaaaaaattacaaaccctaattttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 39084752  T
Q  783 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 882  Q
     |||||||| | |||||   || ||||||||  |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  39084751 aaaatgatgggaggtggtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 39084652  T
Q  883 g 883  Q
    |    
T  39084651 g 39084651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 583 - 883
Target Start/End: Complemental strand, 39190618 - 39190318
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  39190618 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 39190519  T
Q  683 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 782  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| | || || ||||||||    
T  39190518 ttccccaaatcaaaaaattgcaaaccctaattttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactattgaaattgaatct 39190419  T
Q  783 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 882  Q
     |||||||| | |||||   || ||||||||  |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  39190418 aaaatgatgggaggtggtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 39190319  T
Q  883 g 883  Q
    |    
T  39190318 g 39190318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 583 - 883
Target Start/End: Original strand, 42879576 - 42879876
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  42879576 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 42879675  T
Q  683 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 782  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || ||||||||    
T  42879676 ttccccaaatcaaaaaattgcaaaccctaattttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 42879775  T
Q  783 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 882  Q
     |||||||| | |||||   || ||||||||  |  ||| |||||||||||| ||||| |  |||||||||||||||||||||||||||| |||||||||    
T  42879776 aaaatgatgggaggtggtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgattgaatgtt 42879875  T
Q  883 g 883  Q
    |    
T  42879876 g 42879876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 312 - 606
Target Start/End: Original strand, 230435 - 230728
Alignment:
Q  312 agagtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatatg 411  Q
    ||||||||||||||||||| || |||| |||  ||||||||||  ||||||||||   ||||||||||||||| |||||||||| ||||||||  |||||    
T  230435 agagtgaatcatcaactttatccttgagtttg-taaggatcggccaaaatcgtccctcaattatgcgaaatatcaaattagtctctgaatttggcatatg 230533  T
Q  412 tcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcaga 511  Q
    || |||||||||||| |||| | ||||| | ||||||||||||| |||||| |||||||||||||||||||||  |||| |||||||||||| ||||||     
T  230534 tcgatcaatttagtccctctgttcaatttgggtgttaacggtgctgacgtggccgttaacctctcacatgggtctccatgtcagatgccacacaagcagg 230633  T
Q  512 gactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatttgtagaaaatgctttgctctttcttcctcaaatatataaaatt 606  Q
    || |||| |||  || |||||||| ||||||||||||  || ||   |||||||  |||||||||||||| |||||||| ||| |||||||||||    
T  230634 gattaatttggctgatagtgaccataatttccaaggactaatttggctgatttgctgaaaatgctttgctttttcttccccaattatataaaatt 230728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 583 - 883
Target Start/End: Original strand, 43778681 - 43778979
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    |||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  43778681 tttcttcgccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 43778780  T
Q  683 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 782  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || ||||||||    
T  43778781 ttccccaa-tcaaaaaattgcaaaccctaat-ttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 43778878  T
Q  783 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 882  Q
     |||||||| | |||||   || ||||||||| |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  43778879 aaaatgatgggaggtggtcatatgggcaaaaggagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 43778978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 583 - 883
Target Start/End: Complemental strand, 5485851 - 5485551
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    |||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  5485851 tttcttccccaaatatataaaattggaaccctaattttaccatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 5485752  T
Q  683 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 782  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || ||||||||    
T  5485751 ttccccaaatcaaaaaattacaaaccctaattttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaaatgttgaaattgaatct 5485652  T
Q  783 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 882  Q
     |||||||| | || ||   || ||||||||  |  ||| ||||||||||||  |||| |  ||||||||||||||||||||||||||||||||||||||    
T  5485651 aaaatgatgggaggcggtcatatgggcaaaaagagctatcaaagtcaagcttcgtcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 5485552  T
Q  883 g 883  Q
    |    
T  5485551 g 5485551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 583 - 882
Target Start/End: Original strand, 44993100 - 44993399
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    |||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||   |||| |||||| |||||||||  ||| ||||||    
T  44993100 tttcttccccaaatatataaaattggaatcctaattttacaatgtgtaatctacactccaaaatcttcaaattttcttccaataattaagggtcacgttc 44993199  T
Q  683 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 782  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || ||||||||    
T  44993200 ttccccaaatcaaaaaattgcaaaccctaattttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 44993299  T
Q  783 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 882  Q
     |||||||| | |||||   || ||||||||  |  ||| ||||||||| || ||||| |  ||||||||||||||||||||||| ||||||||||||||    
T  44993300 aaaatgatgggaggtggtcatatgggcaaaaagagctatcaaagtcaagtttcatcttcatcctccatgtttaatggtgatgtgaaagtgcttgaatgtt 44993399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 313 - 606
Target Start/End: Complemental strand, 39294937 - 39294645
Alignment:
Q  313 gagtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatatgt 412  Q
    |||||||||||||| |||||| ||||||||  |||| |||||  ||||| ||| || ||| ||| |||||||||||||||||  ||| ||||  ||||||    
T  39294937 gagtgaatcatcaagtttgtccttgaatttgttaag-atcggccaaaattgtcttccaatgatgtgaaatattaaattagtccatgactttggcatatgt 39294839  T
Q  413 caatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcagag 512  Q
    |||||||||||||| |||  ||| ||| |  |||||| ||||| |||||| |||||||||||||||| ||||    || ||||||| ||||||||||| |    
T  39294838 caatcaatttagtccctccgtccgatttggatgttaatggtgctgacgtggccgttaacctctcacaggggtctttatgtcagatgtcacagaagcaggg 39294739  T
Q  513 actaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatttgtagaaaatgctttgctctttcttcctcaaatatataaaatt 606  Q
    |||||| |||  || | |||||||||||||||| |   ||||| ||||||||| |||||||||||| ||||||||||| |||||||||||||||    
T  39294738 actaatttggatgataatgaccaaaatttccaaaggctaaattgattgatttgcagaaaatgcttttctctttcttccccaaatatataaaatt 39294645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 584 - 713
Target Start/End: Original strand, 13438146 - 13438275
Alignment:
Q  584 ttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttct 683  Q
    ||||||| |||||||||||||| | ||||||||||||||||| | |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  13438146 ttcttccccaaatatataaaatagaaaccctaattttacaatctttaatgtacactccaaaattcccaaaatttcttccaataattagtggtaactttct 13438245  T
Q  684 tccccaattcaaaaagcttcaaaccctaat 713  Q
    ||||||||||||||| ||||||||||||||    
T  13438246 tccccaattcaaaaaacttcaaaccctaat 13438275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 583 - 883
Target Start/End: Complemental strand, 32653430 - 32653130
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    ||||||||  ||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| | ||||    
T  32653430 tttcttcccaaaatatataaaattgaaactctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcatgttc 32653331  T
Q  683 ttccccaattcaaaaagcttcaaaccctaa-tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatc 781  Q
    |||||||| |||||||  | |||||||||| |        |||||||  ||||  |||||||  |||||||  ||||||||||| |||| || |||||||    
T  32653330 ttccccaaatcaaaaaattacaaaccctaatttttttttaattgaatatgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatc 32653231  T
Q  782 tgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgt 881  Q
    | |||||| | |||||||   || ||||||||  |  ||| |||||||||||| ||||| |  || ||||||||||||||||||||||||||| ||||||    
T  32653230 taaaatgaag-ggggtggtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatccttcatgtttaatggtgatgtgagagtgctcgaatgt 32653132  T
Q  882 tg 883  Q
    ||    
T  32653131 tg 32653130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 594 - 779
Target Start/End: Complemental strand, 25994897 - 25994708
Alignment:
Q  594 aatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattc 693  Q
    |||||||||||||||||| |||| |||||||| |||||||||||||||||||| | ||||||||||| ||||||||||||||||| ||||||| ||||||    
T  25994897 aatatataaaattggaactctaaatttacaatctgtaatctacactccaaaatcctcaaaatttcttccaataattagtggtaacattcttcctcaattc 25994798  T
Q  694 aaaaagcttcaaaccctaa----tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaa 779  Q
    ||||| || |||||||| |    |        |||||||||||||  || |||| ||||||||||||||||||||| ||||||| |||||    
T  25994797 aaaaaactccaaaccctgatttttttttttttattgaatccgaaaaccagaatccccaaaatttcttcaagcaaaactgttcaaattgaa 25994708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 583 - 713
Target Start/End: Original strand, 230740 - 230869
Alignment:
Q  583 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 682  Q
    |||||||  ||||||||||||||||| | |||||||||||||| |||||||||||||||||| | ||||||||||||| |||||||||||||||||||||    
T  230740 tttcttctccaaatatataaaattggcatcctaattttacaatctgtaatctacactccaaagtccccaaaatttcttccaataattagtggtaacgttc 230839  T
Q  683 ttccccaattcaaaaagcttcaaaccctaat 713  Q
    || || ||||||||||  |||||||||||||    
T  230840 tt-cctaattcaaaaaatttcaaaccctaat 230869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 579 - 889
Target Start/End: Complemental strand, 4520270 - 4519959
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||  ||| |||||||||||||||||||||||  | ||| || ||||||||||| |||||  |||||||||| |   ||||| ||||||       
T  4520270 gctctttcttcgccaattatataaaattggaaccctaattacaaaatttgcaatctacactctaaaatcaccaaaatttcctctgataataagtggttca 4520171  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnn--attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaattt 776  Q
    ||||||| |||||||||||| ||| ||||||||||          |||||||| ||||  |||||||  ||||||||||| |||||||| | || ||  |    
T  4520170 gttcttctccaattcaaaaaacttgaaaccctaatttttttttgtattgaatctgaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaaat 4520071  T
Q  777 gaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttg 876  Q
    |||| |||||||||| |||||||   || ||| |||| || ||||||||||| ||||| ||||| |||||||| ||||||||||||||| | ||||||||    
T  4520070 gaatatgaaatgatg-ggggtggaaatatgggaaaaaacagttatgaaagtcgagcttcatcttcaagctccaagtttaatggtgatgtcaaagtgcttg 4519972  T
Q  877 aatgttgatgtcc 889  Q
    ||||||| |||||    
T  4519971 aatgttggtgtcc 4519959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 598 - 864
Target Start/End: Original strand, 44556917 - 44557183
Alignment:
Q  598 tataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaa 697  Q
    |||||||||||||  ||||||  ||||| || ||||||||||| |||||  || ||||||| | ||||||| ||||||   |||||||||||||||||||    
T  44556917 tataaaattggaattctaattacacaatctgcaatctacactctaaaatcacctaaatttcctccaataataagtggtccagttcttccccaattcaaaa 44557016  T
Q  698 agcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggt 797  Q
    | ||||||||||||||        ||||||||  |||  |||||||  ||||| ||||| |||||||| | || || |  ||||  ||||||||||||||    
T  44557017 aacttcaaaccctaattttttcgtattgaatcttaaaaccaaaatcctcaaaaattcttgaagcaaaactattgaaataaaatccaaaatgatgaggggt 44557116  T
Q  798 gggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 864  Q
    |||  || ||| |||| |  ||||||||||| ||||| |||||  ||||||| ||||||||||||||    
T  44557117 gggaatatgggaaaaaactgttatgaaagtcgagcttcatcttctagctccaagtttaatggtgatg 44557183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 640 - 712
Target Start/End: Complemental strand, 39294625 - 39294553
Alignment:
Q  640 ccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagcttcaaaccctaa 712  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  39294625 ccaaaatccccaaaatttcttccaataattagtggtaacgttcttccccaattcaaaaaacttcaaaccctaa 39294553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 579 - 863
Target Start/End: Complemental strand, 27626530 - 27626246
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||| ||| | |||||||||||||||||||||  ||||| |  ||||||||||| |||||     ||||||| | ||||||| ||||||       
T  27626530 gctctttcttccccaattgtataaaattggaaccctaattacacaatctacaatctacactctaaaatcatttaaatttcctccaataataagtggtcca 27626431  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 778  Q
     ||||||||||||||||||| ||||||||||||||        ||||||||  |||  |||||||  ||||||||||| |||||||| | || || |  |    
T  27626430 attcttccccaattcaaaaaacttcaaaccctaattttttcgtattgaatcttaaaaccaaaatcctcaaaatttcttgaagcaaaactattgaaataaa 27626331  T
Q  779 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgat 863  Q
    |||  |||||||| ||||||||  || ||  |||| |  ||||||||||| ||||| ||||| |||||||| |||||||||||||    
T  27626330 atccaaaatgatggggggtgggaatatggcaaaaaactgttatgaaagtcgagcttcatcttcaagctccaagtttaatggtgat 27626246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 406 - 563
Target Start/End: Complemental strand, 50133102 - 50132945
Alignment:
Q  406 tatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacaga 505  Q
    ||||| |||||||| |||||| ||   |||| |||| | ||||||||||  ||||||||||||||||||||||||||||||| |  |||||||||||| |    
T  50133102 tatatctcaatcaaattagtcccttcgtccatttggggcgttaacggtgatgacgtgaccgttaacctctcacatgggttgctaagtcagatgccacata 50133003  T
Q  506 agcagagactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatt 563  Q
    ||||| ||||||  |||| || |||||| |||| || ||||||  ||||| |||||||    
T  50133002 agcagggactaaattggttgatagtgacaaaaaatttcaaggacgaaattgattgatt 50132945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 580 - 869
Target Start/End: Original strand, 51041027 - 51041314
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 679  Q
    ||||||||||| ||| | |||||||||| ||||||||||  ||||| || |||||||| ||||||||  |||  ||||| | |  |||| ||||||   |    
T  51041027 ctctttcttccccaattgtataaaattgtaaccctaattacacaatctgcaatctacattccaaaatcaccatgatttcctccggtaataagtggttcgg 51041126  T
Q  680 ttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaa 779  Q
    ||||||||| ||||| ||| |||||||||||||         |||||||| |||| ||||||||  |||||    || |||||||| | || || |||||    
T  51041127 ttcttcccctattcataaatcttcaaaccctaactttttcgcattgaatctgaaagtcaaaatcctcaaaaaaatttgaagcaaaactattgaaattgaa 51041226  T
Q  780 tctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgaga 869  Q
    | ||||||||||  |||||||  || ||| |||| || ||||||||||| || || ||||| |||||||| |||||||||||||||||||    
T  51041227 tatgaaatgatg--gggtgggaatatgggaaaaaacagttatgaaagtcgagtttcatcttcaagctccaagtttaatggtgatgtgaga 51041314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 581 - 693
Target Start/End: Original strand, 28100865 - 28100977
Alignment:
Q  581 tctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 680  Q
    |||||||||| ||||| |||||||||| ||| |||||| |||||| | ||||||| | |||||||||||||||||||||| || |||||  ||  |||||    
T  28100865 tctttcttccccaaatctataaaattgaaactctaattgtacaatttataatctagagtccaaaattcccaaaatttcttccattaattgatgacaacgt 28100964  T
Q  681 tcttccccaattc 693  Q
    |||||||||||||    
T  28100965 tcttccccaattc 28100977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 378 - 476
Target Start/End: Complemental strand, 6999327 - 6999229
Alignment:
Q  378 gaaatattaaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctc 476  Q
    ||||||| ||| |||||| ||||||||| | || ||||||||||||||| |||  |||||||||||||||||||||||  |||||||| ||||||||||    
T  6999327 gaaatatcaaaatagtctctgaatttgtaaaatatcaatcaatttagtccctccgtccaattggagtgttaacggtgctaacgtgaccattaacctctc 6999229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 581 - 713
Target Start/End: Complemental strand, 13450107 - 13449984
Alignment:
Q  581 tctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 680  Q
    |||||||||  ||||| |||||||||| ||||||||||||||||| | |||| ||||||||||||||         |||| ||||||||| |  |||| |    
T  13450107 tctttcttcaccaaatgtataaaattgaaaccctaattttacaatctttaatgtacactccaaaatt---------tcttccaataattatttttaacat 13450017  T
Q  681 tcttccccaattcaaaaagcttcaaaccctaat 713  Q
    |||||||||||||||||| ||||||||||||||    
T  13450016 tcttccccaattcaaaaaacttcaaaccctaat 13449984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 579 - 713
Target Start/End: Original strand, 2691684 - 2691818
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | ||||||  |||||||||||| || |||||  ||  ||     
T  2691684 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatctccaaaatttcttccattaattgatgacaaa 2691783  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaat 713  Q
     ||||||||||||||||||| ||| ||||||||||    
T  2691784 attcttccccaattcaaaaaacttaaaaccctaat 2691818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 580 - 713
Target Start/End: Original strand, 20820290 - 20820423
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 679  Q
    ||||||||| |||||||||||||| ||||||||||||||||| ||| ||| | ||| | |  ||||| ||||||||||||| || |||||  ||  || |    
T  20820290 ctctttctttctcaaatatataaatttggaaccctaattttataatttgtcacctaaagtttaaaatccccaaaatttcttccactaattgatgacaaag 20820389  T
Q  680 ttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    |||||| |||||||||||| ||| ||| ||||||    
T  20820390 ttcttctccaattcaaaaaacttaaaaacctaat 20820423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 579 - 857
Target Start/End: Complemental strand, 35997568 - 35997284
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    ||||| |||||| ||| | |||||||||||||||||||||  ||||| || |||||||| || || ||  || ||||||| | ||||||| ||||||       
T  35997568 gctctgtcttccccaattgtataaaattggaaccctaattacacaatctgcaatctacattctaatataacctaaatttcctccaataataagtggtcca 35997469  T
Q  679 gttc------ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttca 772  Q
    ||||      |||||||||| ||||| ||| |||||||||         |||||||| ||||  |||||||  ||||||||||| |||||||| | || |    
T  35997468 gttccagttcttccccaatttaaaaaacttgaaaccctaaatttttcgtattgaatctgaaagccaaaatccacaaaatttcttgaagcaaaactattga 35997369  T
Q  773 atttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaat 857  Q
    | ||||||||||||||||| ||||||||  || ||| |||| |  ||| ||||||| ||||| ||||| ||||| || |||||||    
T  35997368 aattgaatctgaaatgatggggggtgggaatatgggaaaaaactgttaagaaagtcgagcttcatcttcaagctgcaagtttaat 35997284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 313 - 481
Target Start/End: Complemental strand, 39085243 - 39085076
Alignment:
Q  313 gagtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatatgt 412  Q
    ||||||||||||||||| |||  |||||||| || || ||||| ||  ||||||   ||||||||||||||| || ||| ||  ||||||||||| ||||    
T  39085243 gagtgaatcatcaacttcgtccctgaatttt-tacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccatgaatttgttaaatgt 39085145  T
Q  413 caatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 481  Q
    ||||||| ||||||  ||  | |||  |||| |||||||| || |||||| ||||||||||||||||||    
T  39085144 caatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggccgttaacctctcacatg 39085076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 369 - 481
Target Start/End: Complemental strand, 43823605 - 43823494
Alignment:
Q  369 taattatgcgaaatattaaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgtt 468  Q
    ||||| |||||||||  || ||| ||||| ||||||| | ||||||||||| ||||||| ||| | |||| || | ||||||||||| ||||||||||||    
T  43823605 taattgtgcgaaataacaatttaatctttaaatttgtcaaatgtcaatcaagttagtcattctgttcaatcgg-gcgttaacggtgctgacgtgaccgtt 43823507  T
Q  469 aacctctcacatg 481  Q
    |||||||||||||    
T  43823506 aacctctcacatg 43823494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 585 - 713
Target Start/End: Complemental strand, 47942541 - 47942413
Alignment:
Q  585 tcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttctt 684  Q
    |||||| ||| | |||||||||||||||||||||  ||||| | ||||||||| || || ||  || ||||||| | ||||||| ||||||   ||||||    
T  47942541 tcttccccaattgtataaaattggaaccctaattacacaatctataatctacattctaatatcacctaaatttcctccaataataagtggtccagttctt 47942442  T
Q  685 ccccaattcaaaaagcttcaaaccctaat 713  Q
    |||||||||||||| ||| ||||||||||    
T  47942441 ccccaattcaaaaaacttaaaaccctaat 47942413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 400 - 561
Target Start/End: Complemental strand, 44974104 - 44973945
Alignment:
Q  400 atttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgc 499  Q
    |||||| |||| |||||||| |||||| ||   |||| |||| | |||||||| |  |||||| |||||||||||  |||||||||| ||| ||||||||    
T  44974104 atttgtcatatctcaatcaaattagtccctacgtccatttggggcgttaacggagatgacgtggccgttaacctc--acatgggttgtcatgtcagatgc 44974007  T
Q  500 cacagaagcagagactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattga 561  Q
    |||| |||||| ||||||  |||  || |||||| |||||| |||||||| ||||| |||||    
T  44974006 cacataagcagggactaaattggctgatagtgacaaaaattaccaaggatgaaattgattga 44973945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 312 - 481
Target Start/End: Original strand, 43778388 - 43778556
Alignment:
Q  312 agagtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatatg 411  Q
    |||||||||||||||||| ||| ||||||||| || || ||||| ||  ||||||   ||||||||||||||| || ||| ||  | ||||||||| |||    
T  43778388 agagtgaatcatcaacttcgtccttgaatttt-tacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccctaaatttgttaaatg 43778486  T
Q  412 tcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 481  Q
    |||||||| ||||||  ||  | |||  |||  |||||||| || |||||| ||||||||||||||||||    
T  43778487 tcaatcaagttagtccttcagttcaaacggaacgttaacggggctgacgtggccgttaacctctcacatg 43778556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 580 - 713
Target Start/End: Complemental strand, 54387670 - 54387537
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 679  Q
    |||||||| ||  ||||||||||| ||||||||||||| ||||||| ||| | ||| | | |||||| | ||||||||||| ||  ||||  ||  || |    
T  54387670 ctctttctgccctaaatatataaatttggaaccctaatgttacaatttgtcacctagagttcaaaatcctcaaaatttcttccatgaattgatgccaaag 54387571  T
Q  680 ttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    ||||||||||||||||||| ||| ||||||||||    
T  54387570 ttcttccccaattcaaaaaacttaaaaccctaat 54387537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 377 - 481
Target Start/End: Complemental strand, 5486080 - 5485976
Alignment:
Q  377 cgaaatattaaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctc 476  Q
    |||||||| ||| |||||  ||||||||||| ||||||||||| ||||||  ||  | |||  |||| |||||||| || ||||||||||||||||||||    
T  5486080 cgaaatatcaaaatagtccctgaatttgttaaatgtcaatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtgaccgttaacctctc 5485981  T
Q  477 acatg 481  Q
    |||||    
T  5485980 acatg 5485976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 370 - 478
Target Start/End: Complemental strand, 39923042 - 39922934
Alignment:
Q  370 aattatgcgaaatattaaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgtta 469  Q
    ||||||||||||||| || ||| ||  ||||||||||| ||||||||||| ||||||  ||  | |||  ||||||||||||| || |||||| ||||||    
T  39923042 aattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtccttcggttcaaacggagtgttaacggggctgacgtggccgtta 39922943  T
Q  470 acctctcac 478  Q
    |||||||||    
T  39922942 acctctcac 39922934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 370 - 481
Target Start/End: Complemental strand, 2828446 - 2828335
Alignment:
Q  370 aattatgcgaaatattaaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgtta 469  Q
    ||||||||||||||| || ||| || |||||||||||| ||||||||||| ||||||  ||| | |||   |||||||||||  || ||||||  |||||    
T  2828446 aattatgcgaaatatcaatttaatccttgaatttgttaaatgtcaatcaagttagtccttctgttcaaactgagtgttaacgaggctgacgtggtcgtta 2828347  T
Q  470 acctctcacatg 481  Q
    ||||||||||||    
T  2828346 acctctcacatg 2828335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 775 - 882
Target Start/End: Complemental strand, 10544605 - 10544498
Alignment:
Q  775 ttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgct 874  Q
    |||||| |||||||||| | |||||| ||| |||||||| || || | |||||| | ||| ||||| |||||| ||||||||||||||||| ||| || |    
T  10544605 ttgaatatgaaatgatgggtggtgggcgtatgggcaaaaacagttctcaaagtcgaacttcatcttcaagctctatgtttaatggtgatgtcagaatgtt 10544506  T
Q  875 tgaatgtt 882  Q
    ||||||||    
T  10544505 tgaatgtt 10544498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 370 - 481
Target Start/End: Complemental strand, 27626763 - 27626652
Alignment:
Q  370 aattatgcgaaatattaaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgtta 469  Q
    ||||||||||||||| || ||| ||  ||||||||||| ||||||||||| |||||   ||| | |||  |||| |||||||| || |||||||||||||    
T  27626763 aattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtacttctgttcaaacggagcgttaacggggctgacgtgaccgtta 27626664  T
Q  470 acctctcacatg 481  Q
     |||||||||||    
T  27626663 gcctctcacatg 27626652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 598 - 713
Target Start/End: Original strand, 44793243 - 44793358
Alignment:
Q  598 tataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaa 697  Q
    |||||||||||||||||||||  ||||| | ||||||||| || || ||  |  ||||||| | ||||||| ||||||   |||||||||||||||||||    
T  44793243 tataaaattggaaccctaattacacaatctataatctacattctaatatcacataaatttcctccaataataagtggtccagttcttccccaattcaaaa 44793342  T
Q  698 agcttcaaaccctaat 713  Q
    | ||| ||||||||||    
T  44793343 aacttaaaaccctaat 44793358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 397 - 563
Target Start/End: Original strand, 9590384 - 9590549
Alignment:
Q  397 tgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcaga 496  Q
    ||||||||| |||| |||||||| |||||| |||  | || |||| |||||||||  |  || ||| |||||||| ||||||||| |||| ||| |||||    
T  9590384 tgaatttgtcatatatcaatcaaattagtccctccgttcatttggggtgttaacgacgatgatgtggccgttaacttctcacatgagttgtcatgtcaga 9590483  T
Q  497 tgccacagaagcagagactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatt 563  Q
    ||||||| || ||| ||||||| ||| |||  || |||||||||| ||||||  ||||| |||||||    
T  9590484 tgccacataa-cagggactaatttggccgatggtaaccaaaattttcaaggacgaaattgattgatt 9590549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 579 - 713
Target Start/End: Original strand, 11254378 - 11254512
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||| |||||||||||| ||| ||||||||| ||| ||| ||| | ||| | | |||||| ||| ||| ||||| || |||||  ||  ||     
T  11254378 gctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaaattcttccattaattgatgtcaat 11254477  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    |||||||||||||||||||| ||  ||||||||||    
T  11254478 gttcttccccaattcaaaaaactcaaaaccctaat 11254512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 585 - 670
Target Start/End: Complemental strand, 10544778 - 10544693
Alignment:
Q  585 tcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataatta 670  Q
    |||||| ||||| ||||||||||||||||||||||| ||||   |  |||||| |||||||| ||||||||||||| || ||||||    
T  10544778 tcttccccaaatctataaaattggaaccctaatttttcaatccctcgtctacagtccaaaatccccaaaatttcttccattaatta 10544693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 390 - 455
Target Start/End: Original strand, 13437991 - 13438056
Alignment:
Q  390 tagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgc 455  Q
    |||||| ||||||||| | ||||||||||||||||||  ||| || ||||||||||||||||||||    
T  13437991 tagtctctgaatttgtaaaatgtcaatcaatttagtccatctgtcaaattggagtgttaacggtgc 13438056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 579 - 660
Target Start/End: Complemental strand, 26397715 - 26397635
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctt 660  Q
    |||||||||||||||||| ||||||||| ||||||||| |||| ||| ||| ||||| | | |||||| |||||||||||||    
T  26397715 gctctttcttcctcaaatctataaaattagaaccctaa-tttataatttgtcatctagagttcaaaatccccaaaatttctt 26397635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 580 - 713
Target Start/End: Complemental strand, 49524527 - 49524394
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 679  Q
    ||||||||||| ||| |||||||| ||||||||||||| ||| ||| ||| | ||  | | |||||| ||| ||||||||| ||  ||||  ||  || |    
T  49524527 ctctttcttccccaagtatataaatttggaaccctaatgttataatttgtcacctggagttcaaaatcccccaaatttcttacatgaattgatgtcaatg 49524428  T
Q  680 ttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    ||||||||||||||||||| ||| ||||||||||    
T  49524427 ttcttccccaattcaaaaaacttaaaaccctaat 49524394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 313 - 481
Target Start/End: Original strand, 44992808 - 44992975
Alignment:
Q  313 gagtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatatgt 412  Q
    ||||||||||||||||| |||  |||||||| || || ||||  ||  ||||||   ||||||||||||||| || ||| ||  ||| ||||||| ||||    
T  44992808 gagtgaatcatcaacttcgtccctgaatttt-tacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgagtttgttaaatgt 44992906  T
Q  413 caatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 481  Q
    ||||||| ||||||  ||  | |||  |||| |||||||| || |||||| ||||||||||||||||||    
T  44992907 caatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggccgttaacctctcacatg 44992975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 311 - 426
Target Start/End: Complemental strand, 4520544 - 4520430
Alignment:
Q  311 aagagtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatat 410  Q
    ||||||||||||||||||| ||| ||||||||| || |  ||||  ||| || |||   ||||||||||||||| || |||||  |||||||||||| ||    
T  4520544 aagagtgaatcatcaacttcgtccttgaatttt-tatgagtcggccaaattcatccatcaattatgcgaaatatcaacttagttcttgaatttgttaaat 4520446  T
Q  411 gtcaatcaatttagtc 426  Q
    ||||||||| ||||||    
T  4520445 gtcaatcaagttagtc 4520430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 466 - 573
Target Start/End: Complemental strand, 26397862 - 26397756
Alignment:
Q  466 gttaacctctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatttg 565  Q
    |||||||||||||| || ||| ||| ||||||| |||| |||||  || |||| ||| ||| |||||| ||||||||||| || |||||| |||||||||    
T  26397862 gttaacctctcacaaggcttgtcatgtcagatgtcacacaagcaaggattaatttggccgaaagtgac-aaaatttccaatgaccaaattgattgatttg 26397764  T
Q  566 tagaaaat 573  Q
     |||||||    
T  26397763 cagaaaat 26397756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 466 - 573
Target Start/End: Original strand, 28100717 - 28100823
Alignment:
Q  466 gttaacctctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatttg 565  Q
    ||||||||||||||  | ||| ||| ||||||| |||| |||||||||||||| ||| ||| ||||| |||||||  |||||||  |||| |||||||||    
T  28100717 gttaacctctcacaaagtttgtcatgtcagatgacacacaagcagagactaatttggccgaaagtga-caaaattgacaaggatggaattgattgatttg 28100815  T
Q  566 tagaaaat 573  Q
     |||||||    
T  28100816 cagaaaat 28100823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 370 - 481
Target Start/End: Complemental strand, 39190854 - 39190743
Alignment:
Q  370 aattatgcgaaatattaaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgtta 469  Q
    ||||||||||||||| || ||| ||  ||||||||||| ||||||||||| ||||||  ||  | |||  |||| |||||||| |  |||||| ||||||    
T  39190854 aattatgcgaaatatcaatttaatccgtgaatttgttaaatgtcaatcaagttagtccttcagttcaaacggagcgttaacggggttgacgtggccgtta 39190755  T
Q  470 acctctcacatg 481  Q
    ||||||||||||    
T  39190754 acctctcacatg 39190743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 579 - 713
Target Start/End: Original strand, 35402069 - 35402202
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | | |||| ||| ||||||||| ||  ||||  ||  ||     
T  35402069 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttc-aaatcccccaaatttcttccatgaattgatgtcaat 35402167  T
Q  679 gttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    |||||||||||||| ||||| ||| ||||||||||    
T  35402168 gttcttccccaattaaaaaaacttaaaaccctaat 35402202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 443 - 564
Target Start/End: Complemental strand, 27383936 - 27383815
Alignment:
Q  443 gtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttc 542  Q
    ||||||||||||  ||||||  ||||||||| ||| |||| ||||||| |||||||||||| |||||  || |||  |||  || |||||| ||||||||    
T  27383936 gtgttaacggtgatgacgtggtcgttaacctatcagatggattgccatgtcagatgccacataagcaatgaataaattggctgatagtgacaaaaatttc 27383837  T
Q  543 caaggatcaaattaattgattt 564  Q
    ||| ||  ||||| ||||||||    
T  27383836 caaagacgaaattgattgattt 27383815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 397 - 481
Target Start/End: Complemental strand, 25995120 - 25995036
Alignment:
Q  397 tgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 481  Q
    ||||||||| | ||||||||||||||| || |||  |||||||||||||||| |  ||| |||||   |||||||||||||||||    
T  25995120 tgaatttgtaaaatgtcaatcaatttattccctccgtccaattggagtgttagcattgctgacgtagtcgttaacctctcacatg 25995036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 849 - 889
Target Start/End: Complemental strand, 27385980 - 27385940
Alignment:
Q  849 atgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 889  Q
    ||||||||||||||||||||||| ||||||||||| |||||    
T  27385980 atgtttaatggtgatgtgagagtacttgaatgttggtgtcc 27385940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 377 - 480
Target Start/End: Complemental strand, 15450444 - 15450341
Alignment:
Q  377 cgaaatattaaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctc 476  Q
    |||||||| ||| |||||  ||||||||| | ||||   ||||||| ||| |||  ||||| ||||| ||||||||||| ||||||  ||||||||||||    
T  15450444 cgaaatatcaaaatagtccctgaatttgtaaaatgttcgtcaattttgtccctccgtccaaatggagggttaacggtgctgacgtggtcgttaacctctc 15450345  T
Q  477 acat 480  Q
    ||||    
T  15450344 acat 15450341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 370 - 481
Target Start/End: Complemental strand, 47942781 - 47942670
Alignment:
Q  370 aattatgcgaaatattaaattagtctttgaatttgttatatgtcaatcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgtta 469  Q
    ||||||||||||||| || ||| || ||||||||||||  |||||||||||||| ||| |||   |||  ||   |||||||| || |||||| ||||||    
T  47942781 aattatgcgaaatatcaatttaatccttgaatttgttaattgtcaatcaatttaatcattctgatcaaacgggccgttaacggggctgacgtggccgtta 47942682  T
Q  470 acctctcacatg 481  Q
    |||||| |||||    
T  47942681 acctcttacatg 47942670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 728 - 889
Target Start/End: Original strand, 28101018 - 28101179
Alignment:
Q  728 tccgaaattcaaaa-tcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaag 826  Q
    |||||||| ||||| || |||||||||||||||||     ||||||  ||||||||||||||||| | |||||   ||  |||||||  | |||| ||||    
T  28101018 tccgaaatccaaaaatctccaaaatttcttcaagctttggtgttcaggttgaatctgaaatgatgggtggtggca-tataggcaaaaatagttatcaaag 28101116  T
Q  827 tcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 889  Q
     | | ||| ||||| |||||| |||| ||||||||||||||| |||||||||| ||| |||||    
T  28101117 acgatcttcatcttcaagctctatgtataatggtgatgtgagggtgcttgaatattggtgtcc 28101179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 312 - 426
Target Start/End: Original strand, 44556619 - 44556732
Alignment:
Q  312 agagtgaatcatcaactttgtctttgaattttataaggatcggttaaaatcgtcctctaattatgcgaaatattaaattagtctttgaatttgttatatg 411  Q
    |||| |||| ||||||||||||  |||||||| || || ||||| ||| | ||||   ||||||| ||||||| || ||||||  ||||||||||| |||    
T  44556619 agagggaattatcaactttgtccctgaatttt-tacgggtcggtcaaattagtccctcaattatgtgaaatatcaatttagtccatgaatttgttaaatg 44556717  T
Q  412 tcaatcaatttagtc 426  Q
    |||||||| ||||||    
T  44556718 tcaatcaagttagtc 44556732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 387 - 424
Target Start/End: Complemental strand, 10544989 - 10544952
Alignment:
Q  387 aattagtctttgaatttgttatatgtcaatcaatttag 424  Q
    ||||||||||||||||| ||| ||||||||||||||||    
T  10544989 aattagtctttgaattttttaaatgtcaatcaatttag 10544952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 416 - 481
Target Start/End: Complemental strand, 32653620 - 32653555
Alignment:
Q  416 tcaatttagtcactctatccaattggagtgttaacggtgcagacgtgaccgttaacctctcacatg 481  Q
    ||||||| ||| |||  ||||| ||||| ||||||||||| ||||||  |||||||||||||||||    
T  32653620 tcaattttgtccctccgtccaaatggagggttaacggtgctgacgtggtcgttaacctctcacatg 32653555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 580 - 617
Target Start/End: Complemental strand, 42982248 - 42982211
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaat 617  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  42982248 ctctttcttccccaaatatataaatttggaaccctaat 42982211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 97; Significance: 3e-47; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 585 - 813
Target Start/End: Complemental strand, 38082 - 37856
Alignment:
Q  585 tcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttctt 684  Q
    |||||| ||||| ||||||||||||||||||||||||||||   ||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  38082 tcttccccaaatgtataaaattggaaccctaattttacaatcattaatccacactccaaaattcccaaaaattcttccaataattagtggtaacgttctt 37983  T
Q  685 ccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaat-tcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctg 783  Q
    |||||||| ||| | | ||||||||||||        ||||||||||||||   |||||| |||||||| |||||| ||||| ||||  | |||||||||    
T  37982 ccccaattgaaataacctcaaaccctaat--tttttgattgaatccgaaatcaaaaaatccccaaaattccttcaaacaaaactgttgtaattgaatctg 37885  T
Q  784 aaatgatgaggggtgggtgtaagggcaaaa 813  Q
    ||||||||| ||||||||||| ||||||||    
T  37884 aaatgatga-gggtgggtgtatgggcaaaa 37856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 443 - 518
Target Start/End: Complemental strand, 38241 - 38166
Alignment:
Q  443 gtgttaacggtgcagacgtgaccgttaacctctcacatgggttgccatatcagatgccacagaagcagagactaat 518  Q
    |||||||||| || ||| || |||||||||||||||||||  |||||| ||| | |||||| |||||| |||||||    
T  38241 gtgttaacggagctgacttggccgttaacctctcacatggactgccatgtcaaacgccacacaagcagggactaat 38166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 74; Significance: 2e-33; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 579 - 800
Target Start/End: Original strand, 57669 - 57890
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||| |||||||||||||||| |||||| ||| ||| || ||||||||||||||||||||  ||||||||||||  |||||| |||||||||    
T  57669 gctctttcttccccaaatatataaaattgaaaccctgattatactatctgtaatctacactccaaaataaccaaaatttcttcgaataataagtggtaac 57768  T
Q  679 gttcttcc-ccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttg 777  Q
     ||||||| | |||||||||| ||||||||||| ||        |||||||| ||||| |||||||   ||||||||||  ||||||| | || || |||    
T  57769 attcttcctctaattcaaaaaacttcaaaccct-atttttttttattgaatctgaaatccaaaatccaaaaaatttctttcagcaaaactattgaaattg 57867  T
Q  778 aatctgaaatgatgaggggtggg 800  Q
    |||| ||||| ||||||||||||    
T  57868 aatccgaaatcatgaggggtggg 57890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1041 (Bit Score: 48; Significance: 6e-18; HSPs: 2)
Name: scaffold1041
Description:

Target: scaffold1041; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 579 - 646
Target Start/End: Complemental strand, 2710 - 2643
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaat 646  Q
    |||||||||||| ||||||||||||| |||||| |||||| ||| |||||||||||||||||||||||    
T  2710 gctctttcttccccaaatatataaaactggaactctaattatactatatgtaatctacactccaaaat 2643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1041; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 579 - 646
Target Start/End: Original strand, 2356 - 2423
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaat 646  Q
    |||||||||||| ||||||||||||||||||||||| ||| ||| ||  |||||||||||||||||||    
T  2356 gctctttcttccccaaatatataaaattggaaccctcattatactatcagtaatctacactccaaaat 2423  T

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Target: scaffold0722 (Bit Score: 38; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 579 - 708
Target Start/End: Original strand, 4446 - 4574
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||| ||| ||||| | |  |||||  |||||| ||||| || |||||  ||  |||    
T  4446 gctctttctttctcaaatctataaaattggaactctaattttacaatttgtcatctagagtttaaaatctccaaaa-ttcttccattaattgatgacaac 4544  T
Q  679 gttcttccccaattcaaaaagcttcaaacc 708  Q
    |||||||| |||| | |||| |||||||||    
T  4545 gttcttcctcaatgctaaaaacttcaaacc 4574  T

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Target: scaffold0722; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 492 - 573
Target Start/End: Original strand, 4327 - 4407
Alignment:
Q  492 tcagatgccacagaagcagagactaatgtggtcgacagtgaccaaaatttccaaggatcaaattaattgatttgtagaaaat 573  Q
    ||||||| |||| ||||| | |||||| || |||| |||||| ||||||||||| || |||||| ||||||| |||||||||    
T  4327 tcagatgtcacacaagcatatactaatttgatcgaaagtgac-aaaatttccaacgaccaaattgattgattagtagaaaat 4407  T

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Target: scaffold0564 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 580 - 713
Target Start/End: Complemental strand, 9666 - 9533
Alignment:
Q  580 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 679  Q
    ||||||||||| |||||||||||| ||| ||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  || |    
T  9666 ctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatgtcaatg 9567  T
Q  680 ttcttccccaattcaaaaagcttcaaaccctaat 713  Q
    || |||||||||||||||| ||| ||||||||||    
T  9566 tttttccccaattcaaaaaacttaaaaccctaat 9533  T

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Target: scaffold0345 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 579 - 698
Target Start/End: Complemental strand, 1283 - 1164
Alignment:
Q  579 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 678  Q
    |||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | ||||||  || ||||||||| ||  ||||  ||  ||     
T  1283 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgttacctagagttcaaaatctcccaaatttcttccatgaattgatgtcaat 1184  T
Q  679 gttcttccccaattcaaaaa 698  Q
    ||||||||||||||||||||    
T  1183 gttcttccccaattcaaaaa 1164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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