View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8604_low_12 (Length: 241)
Name: NF8604_low_12
Description: NF8604
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8604_low_12 |
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Alignment Details
Target: chr1 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 12 - 220
Target Start/End: Complemental strand, 49956497 - 49956289
Alignment:
| Q |
12 |
cagagaataaaatgatgaatgtgttaaaataagaaaatccaaacaaattacatatatatgaaaaggactatgtatatgtaatctaagagatatagcaagt |
111 |
Q |
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| T |
49956497 |
cagagaataaaatgatgaatgtgttaaaataagaaaatccaaacaaattacatatatatgaaaaggactatgtatatgtaatctaagagatatagcaagt |
49956398 |
T |
|
| Q |
112 |
tttgaaagaataaaacaacaaatgtggggttaagtgtatccggccccaagttagattgcaaaaaccctaatgatagatactgatagcaacctttccatga |
211 |
Q |
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| T |
49956397 |
tttgaaagaataaaacaacaaatgtggggttaagtgtatccggccccaagttagattgcaaaaaccctaatgatagatactgatagcaacctttccatga |
49956298 |
T |
|
| Q |
212 |
agcaagtct |
220 |
Q |
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||||||||| |
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| T |
49956297 |
agcaagtct |
49956289 |
T |
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