View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8606A_low_104 (Length: 302)

Name: NF8606A_low_104
Description: NF8606A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8606A_low_104
NF8606A_low_104
[»] chr7 (42 HSPs)
chr7 (28-302)||(29544636-29544909)
chr7 (41-197)||(9801704-9801859)
chr7 (28-193)||(7494813-7494977)
chr7 (44-196)||(20470640-20470792)
chr7 (64-185)||(21545668-21545789)
chr7 (28-195)||(7815440-7815606)
chr7 (41-196)||(20017082-20017237)
chr7 (28-196)||(21471913-21472079)
chr7 (28-196)||(7142215-7142382)
chr7 (28-189)||(315293-315450)
chr7 (28-165)||(23125017-23125154)
chr7 (82-197)||(10670404-10670518)
chr7 (28-179)||(22067650-22067802)
chr7 (28-196)||(2630307-2630474)
chr7 (73-195)||(18496726-18496848)
chr7 (28-195)||(1074569-1074736)
chr7 (39-182)||(7777885-7778026)
chr7 (28-143)||(30405710-30405825)
chr7 (41-129)||(9761313-9761400)
chr7 (28-170)||(9070505-9070646)
chr7 (41-163)||(24596867-24596989)
chr7 (78-134)||(12358655-12358711)
chr7 (41-160)||(4977687-4977805)
chr7 (56-185)||(20446347-20446475)
chr7 (41-161)||(20461511-20461633)
chr7 (41-168)||(22532503-22532629)
chr7 (73-189)||(7493475-7493590)
chr7 (41-163)||(3487231-3487351)
chr7 (73-148)||(5312664-5312739)
chr7 (71-161)||(7372434-7372522)
chr7 (33-163)||(8308899-8309025)
chr7 (27-170)||(10292870-10293011)
chr7 (41-137)||(3268855-3268951)
chr7 (41-195)||(2353072-2353227)
chr7 (41-163)||(4828918-4829039)
chr7 (79-137)||(14649663-14649721)
chr7 (56-138)||(46054840-46054921)
chr7 (89-137)||(10253629-10253677)
chr7 (50-104)||(1255135-1255189)
chr7 (142-195)||(9761263-9761316)
chr7 (28-116)||(9755910-9755997)
chr7 (61-163)||(25706303-25706405)
[»] chr4 (35 HSPs)
chr4 (28-197)||(15192320-15192488)
chr4 (28-196)||(47024596-47024763)
chr4 (28-197)||(18898099-18898267)
chr4 (27-197)||(27302893-27303062)
chr4 (28-196)||(34864126-34864293)
chr4 (65-224)||(51884756-51884914)
chr4 (27-197)||(5676315-5676485)
chr4 (28-186)||(17026537-17026694)
chr4 (40-197)||(12111157-12111312)
chr4 (29-189)||(25315069-25315228)
chr4 (41-196)||(5906593-5906748)
chr4 (41-187)||(31859740-31859886)
chr4 (61-189)||(1695684-1695811)
chr4 (28-192)||(10320055-10320217)
chr4 (41-163)||(23353751-23353869)
chr4 (28-163)||(19601915-19602049)
chr4 (33-163)||(13064547-13064677)
chr4 (41-187)||(33519159-33519305)
chr4 (41-161)||(17187302-17187422)
chr4 (56-162)||(7024083-7024189)
chr4 (28-164)||(9782847-9782981)
chr4 (56-194)||(26159900-26160036)
chr4 (73-163)||(22119782-22119871)
chr4 (41-130)||(9288339-9288428)
chr4 (49-133)||(17339707-17339792)
chr4 (41-163)||(29437600-29437712)
chr4 (41-163)||(21077362-21077484)
chr4 (56-137)||(46647339-46647420)
chr4 (61-137)||(10576602-10576678)
chr4 (72-137)||(32021954-32022018)
chr4 (110-158)||(4732954-4733002)
chr4 (41-137)||(13275631-13275730)
chr4 (43-113)||(18444381-18444451)
chr4 (89-135)||(53001069-53001115)
chr4 (122-155)||(20985264-20985297)
[»] chr5 (32 HSPs)
chr5 (28-203)||(11274153-11274328)
chr5 (41-190)||(26329906-26330054)
chr5 (27-202)||(22229920-22230094)
chr5 (28-189)||(16622514-16622674)
chr5 (41-189)||(30072245-30072393)
chr5 (41-195)||(17027657-17027810)
chr5 (28-186)||(25594533-25594690)
chr5 (28-203)||(24841870-24842044)
chr5 (28-197)||(25680704-25680872)
chr5 (49-161)||(18452677-18452789)
chr5 (28-189)||(16634163-16634324)
chr5 (28-195)||(24517462-24517629)
chr5 (41-195)||(26070603-26070757)
chr5 (28-197)||(12339844-12340012)
chr5 (89-163)||(19763749-19763823)
chr5 (65-161)||(7742735-7742831)
chr5 (28-175)||(17381892-17382042)
chr5 (61-163)||(18178251-18178353)
chr5 (33-135)||(20694761-20694863)
chr5 (73-163)||(23157667-23157757)
chr5 (61-163)||(24130775-24130879)
chr5 (73-161)||(19331671-19331759)
chr5 (44-162)||(11997757-11997876)
chr5 (28-163)||(18872915-18873049)
chr5 (41-126)||(24410830-24410915)
chr5 (79-195)||(17695294-17695410)
chr5 (51-158)||(22643773-22643880)
chr5 (28-138)||(25075201-25075310)
chr5 (28-138)||(25133170-25133279)
chr5 (41-155)||(25367723-25367836)
chr5 (55-153)||(4325229-4325328)
chr5 (41-153)||(18435299-18435412)
[»] chr8 (35 HSPs)
chr8 (28-197)||(16052106-16052275)
chr8 (56-197)||(11310086-11310225)
chr8 (28-197)||(24696698-24696868)
chr8 (32-197)||(28902210-28902374)
chr8 (28-197)||(16054411-16054579)
chr8 (51-186)||(28901190-28901324)
chr8 (28-146)||(28859119-28859237)
chr8 (38-189)||(24120350-24120501)
chr8 (40-163)||(28291964-28292087)
chr8 (43-186)||(14976952-14977092)
chr8 (28-161)||(32239404-32239537)
chr8 (28-163)||(12956597-12956733)
chr8 (33-163)||(5153879-5154009)
chr8 (33-163)||(29291891-29292021)
chr8 (41-189)||(22894370-22894515)
chr8 (41-148)||(13583398-13583505)
chr8 (56-163)||(30850963-30851070)
chr8 (83-185)||(5569981-5570083)
chr8 (41-163)||(11437548-11437671)
chr8 (94-197)||(13081764-13081867)
chr8 (41-163)||(30543890-30544013)
chr8 (28-155)||(14424684-14424811)
chr8 (41-160)||(6888059-6888178)
chr8 (28-163)||(27097665-27097798)
chr8 (102-172)||(23408111-23408181)
chr8 (83-163)||(31436644-31436720)
chr8 (56-162)||(28074657-28074763)
chr8 (41-137)||(13529994-13530091)
chr8 (41-137)||(13619533-13619630)
chr8 (100-197)||(29047170-29047267)
chr8 (41-137)||(35135310-35135406)
chr8 (199-293)||(28859030-28859123)
chr8 (41-137)||(28260178-28260275)
chr8 (192-244)||(12956772-12956824)
chr8 (28-101)||(24584650-24584722)
[»] chr2 (33 HSPs)
chr2 (28-197)||(27417092-27417261)
chr2 (28-190)||(30998888-30999049)
chr2 (28-165)||(21505000-21505137)
chr2 (35-163)||(1732674-1732802)
chr2 (28-196)||(1733208-1733375)
chr2 (28-172)||(16593605-16593748)
chr2 (41-195)||(18236134-18236288)
chr2 (28-196)||(35707920-35708087)
chr2 (27-160)||(24188085-24188217)
chr2 (28-195)||(25474154-25474320)
chr2 (41-162)||(17415028-17415148)
chr2 (41-163)||(18818826-18818953)
chr2 (28-150)||(22511062-22511184)
chr2 (28-137)||(17152270-17152379)
chr2 (41-155)||(14921910-14922024)
chr2 (41-167)||(19541166-19541291)
chr2 (56-156)||(31262142-31262241)
chr2 (190-293)||(9504214-9504317)
chr2 (190-293)||(9515580-9515683)
chr2 (50-137)||(24047520-24047608)
chr2 (43-187)||(34063680-34063824)
chr2 (81-162)||(17884507-17884588)
chr2 (28-150)||(32619746-32619863)
chr2 (134-186)||(19949365-19949417)
chr2 (102-161)||(22525685-22525744)
chr2 (41-163)||(17862539-17862661)
chr2 (87-161)||(31274131-31274205)
chr2 (56-132)||(15454433-15454509)
chr2 (61-137)||(21848963-21849039)
chr2 (33-93)||(27917916-27917976)
chr2 (56-187)||(39730591-39730722)
chr2 (28-172)||(15829238-15829391)
chr2 (116-150)||(19949433-19949467)
[»] chr1 (36 HSPs)
chr1 (28-189)||(11769831-11769992)
chr1 (28-189)||(23519606-23519766)
chr1 (28-197)||(26657593-26657761)
chr1 (28-158)||(25494357-25494486)
chr1 (28-196)||(30781877-30782044)
chr1 (28-185)||(25727751-25727907)
chr1 (28-185)||(25736159-25736315)
chr1 (40-172)||(18300857-18300989)
chr1 (28-172)||(23223529-23223674)
chr1 (28-197)||(25730401-25730569)
chr1 (28-173)||(30675601-30675745)
chr1 (62-197)||(50047325-50047460)
chr1 (94-199)||(12423742-12423847)
chr1 (50-187)||(26102195-26102332)
chr1 (41-163)||(26854183-26854305)
chr1 (73-187)||(52271084-52271198)
chr1 (77-189)||(9328333-9328444)
chr1 (77-193)||(9353178-9353293)
chr1 (61-163)||(19257669-19257769)
chr1 (77-190)||(9252446-9252558)
chr1 (73-162)||(25373907-25373996)
chr1 (28-137)||(31313668-31313777)
chr1 (41-163)||(15298734-15298855)
chr1 (33-137)||(27461070-27461175)
chr1 (41-133)||(15416866-15416959)
chr1 (62-163)||(25126630-25126731)
chr1 (28-179)||(23521566-23521727)
chr1 (93-163)||(23505938-23506007)
chr1 (45-121)||(34381844-34381920)
chr1 (56-137)||(18795325-18795407)
chr1 (61-133)||(31319504-31319576)
chr1 (95-195)||(25665601-25665701)
chr1 (28-87)||(8247596-8247655)
chr1 (84-163)||(21548820-21548899)
chr1 (62-163)||(18391232-18391334)
chr1 (84-137)||(15851110-15851163)
[»] chr6 (20 HSPs)
chr6 (28-186)||(30355433-30355591)
chr6 (28-196)||(15575041-15575208)
chr6 (28-196)||(17860279-17860446)
chr6 (41-161)||(26499712-26499832)
chr6 (28-163)||(24507306-24507440)
chr6 (41-150)||(33638381-33638490)
chr6 (28-171)||(15998628-15998769)
chr6 (50-137)||(9396496-9396583)
chr6 (61-195)||(16439607-16439741)
chr6 (85-151)||(33638259-33638325)
chr6 (82-146)||(24618053-24618117)
chr6 (28-161)||(16387120-16387253)
chr6 (41-163)||(9943013-9943135)
chr6 (61-162)||(14924284-14924383)
chr6 (28-158)||(22262458-22262587)
chr6 (72-137)||(32930334-32930399)
chr6 (73-161)||(26512644-26512732)
chr6 (73-161)||(26517760-26517848)
chr6 (57-120)||(12972291-12972354)
chr6 (84-153)||(23418983-23419052)
[»] chr3 (32 HSPs)
chr3 (28-163)||(19219074-19219209)
chr3 (28-161)||(19263769-19263905)
chr3 (28-197)||(10341903-10342072)
chr3 (28-197)||(16970578-16970746)
chr3 (28-195)||(25883220-25883386)
chr3 (28-153)||(25919345-25919469)
chr3 (28-197)||(27415285-27415452)
chr3 (97-197)||(11521350-11521450)
chr3 (56-189)||(1475117-1475249)
chr3 (28-197)||(18065913-18066082)
chr3 (41-163)||(19542987-19543109)
chr3 (28-197)||(33914397-33914565)
chr3 (28-197)||(12573407-12573575)
chr3 (28-197)||(13549871-13550039)
chr3 (41-168)||(23908129-23908256)
chr3 (61-163)||(18474319-18474421)
chr3 (28-145)||(28422569-28422685)
chr3 (28-148)||(11474963-11475083)
chr3 (28-196)||(21017994-21018161)
chr3 (28-163)||(5632406-5632540)
chr3 (61-163)||(21828996-21829098)
chr3 (80-195)||(2729454-2729571)
chr3 (38-163)||(8402414-8402540)
chr3 (41-153)||(26418849-26418961)
chr3 (61-137)||(25188906-25188983)
chr3 (61-197)||(13911407-13911541)
chr3 (73-159)||(30493132-30493218)
chr3 (44-111)||(33577866-33577934)
chr3 (41-99)||(26297876-26297934)
chr3 (226-299)||(19263620-19263693)
chr3 (61-148)||(26387723-26387810)
chr3 (42-86)||(26797189-26797233)
[»] scaffold0171 (2 HSPs)
scaffold0171 (28-172)||(21514-21658)
scaffold0171 (41-189)||(6325-6472)
[»] scaffold0650 (1 HSPs)
scaffold0650 (30-196)||(5600-5765)
[»] scaffold0188 (1 HSPs)
scaffold0188 (32-186)||(26795-26949)
[»] scaffold0386 (3 HSPs)
scaffold0386 (28-197)||(8538-8707)
scaffold0386 (79-194)||(11631-11746)
scaffold0386 (28-84)||(13013-13069)
[»] scaffold0282 (1 HSPs)
scaffold0282 (61-197)||(22443-22578)
[»] scaffold0011 (1 HSPs)
scaffold0011 (28-163)||(228050-228184)
[»] scaffold0362 (1 HSPs)
scaffold0362 (92-196)||(7799-7903)
[»] scaffold0190 (1 HSPs)
scaffold0190 (41-160)||(11564-11683)
[»] scaffold0065 (1 HSPs)
scaffold0065 (28-163)||(12361-12495)
[»] scaffold0337 (1 HSPs)
scaffold0337 (28-163)||(1925-2059)
[»] scaffold1149 (1 HSPs)
scaffold1149 (81-163)||(1957-2038)
[»] scaffold0002 (1 HSPs)
scaffold0002 (28-155)||(447093-447219)
[»] scaffold0185 (1 HSPs)
scaffold0185 (96-163)||(2684-2751)
[»] scaffold0043 (1 HSPs)
scaffold0043 (64-163)||(58898-59000)
[»] scaffold1026 (1 HSPs)
scaffold1026 (122-155)||(1701-1734)
[»] scaffold0836 (1 HSPs)
scaffold0836 (122-155)||(2818-2851)


Alignment Details
Target: chr7 (Bit Score: 239; Significance: 1e-132; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 28 - 302
Target Start/End: Original strand, 29544636 - 29544909
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  29544636 ttttttagtaaggaatcatgtaaatcgacaaaccaagacatcacatgaaggatcaaagatatgaagattgaagatcaatgattcttagaaggtttttgaa 29544735  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacgcaagaattcgcacgtgaggggttgcctgat 227  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||| ||    
T  29544736 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcaaaaacgcaagaattcacacgtgaggggctgcctcat 29544835  T
Q  228 gcgccactgcgcatgggacagtgtttgccattgcctcatgcgcatcctgcacgtcagggatgcgcaactgcgttt 302  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  29544836 gcgccactgcgcatgggacagtgtttgcca-tgcctcatgcgcatcctgcacgtcagggatgcgcaactgcgttt 29544909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 41 - 197
Target Start/End: Complemental strand, 9801859 - 9801704
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 140  Q
    |||||||| |||||||||| ||| ||||||  |||||||||||||||||||||||||||| |||||| |||||| ||||||||| |||| ||||||||||    
T  9801859 aatcatgtaaatcgacaaatcaaaacatcatgtgaaggatcaaggatatgaagattgaag-tcaatggttcttaaaaggtttttaaagaaaatacaaagt 9801761  T
Q  141 gaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 197  Q
    || ||||||| |||||||||||||||||||||||| | |||||||||||||||||||    
T  9801760 gaggaaaatttatttcaagttcctaggagttttcaaatggaagaacgatcgaaaacg 9801704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 28 - 193
Target Start/End: Original strand, 7494813 - 7494977
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    |||||||||  | |||||||| ||| || ||| |||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||   ||||    
T  7494813 ttttgtagtgggaaatcatgtaaattgaaaaatcaagacatcacatgaaggatcaaggatatgaagattgaagtt-aatggttcttagaaggtccatgaa 7494911  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaa 193  Q
    ||||||||||||||||||||||| |||||||| | |||||||||| ||||||||||||||||||||    
T  7494912 gacaatacaaagtgaagaaaatttatttcaagattctaggagtttccagacggaagaacgatcgaa 7494977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 44 - 196
Target Start/End: Complemental strand, 20470792 - 20470640
Alignment:
Q  44 catgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaa 143  Q
    ||||| |||||||||| ||||||||| |||||| |||||||||| |||| ||||||| |||||| ||||||||||||| |||||||||||||||| ||||    
T  20470792 catgtaaatcgacaaatcaagacatcgcatgaacgatcaaggatgtgaatattgaagttcaatggttcttagaaggttcttgaagacaatacaaaatgaa 20470693  T
Q  144 gaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaac 196  Q
    ||||||| ||||||||||| || |||||| ||||| |||||||||||||||||    
T  20470692 gaaaattgatttcaagttcgtatgagtttccagacagaagaacgatcgaaaac 20470640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 21545789 - 21545668
Alignment:
Q  64 gacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcc 163  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||| |||||||||||||||||||||||||| |    
T  21545789 gacatcacgtgaaggatcaaggatatgaagattgaagatcaatggttcttagaaagtatttgaagacaataaaaagtgaagaaaattcatttcaagtttc 21545690  T
Q  164 taggagttttcagacggaagaa 185  Q
    ||||||||| |||||| |||||    
T  21545689 taggagtttccagacgaaagaa 21545668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 28 - 195
Target Start/End: Original strand, 7815440 - 7815606
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||||||| | ||||||||| |||| |||||  |||||||||  |||||||||||||||||  | ||||||||||||   ||   |||||||| |||||    
T  7815440 ttttgtagtgatgaatcatgtaaatcaacaaataaagacatcatgtgaaggatcaaggatataga-attgaagatcaaaagttgacagaaggttgttgaa 7815538  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaa 195  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  7815539 gacaatacaaagtgaagaaaattcatttcaagttcataggagttttcagacggaagaacgatcgaaaa 7815606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 41 - 196
Target Start/End: Original strand, 20017082 - 20017237
Alignment:
Q  41 aatcatgttaatcgacaaa-ccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaag 139  Q
    |||||||||  |||||||| |||||||||||  |||||||| ||| ||||||||||||||  |||||| ||||||||||||| |||||||||||||||||    
T  20017082 aatcatgtttctcgacaaatccaagacatcatgtgaaggattaagcatatgaagattgaac-tcaatggttcttagaaggttcttgaagacaatacaaag 20017180  T
Q  140 tgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaac 196  Q
    ||||||||||||||||||||||||||||||||| || ||| ||||||  ||||||||    
T  20017181 tgaagaaaattcatttcaagttcctaggagtttacaaacgaaagaacagtcgaaaac 20017237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 28 - 196
Target Start/End: Original strand, 21471913 - 21472079
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaaga-ttgaagatcaatgattcttagaaggtttttga 126  Q
    ||||||||| ||||||||||| |||| | ||| || |||||||| ||| |||||||||||  ||||| |||||||| || | ||||||||||||| ||||    
T  21471913 ttttgtagtgaggaatcatgtaaatcaataaatcatgacatcacgtgagggatcaaggat--gaagaattgaagataaagggttcttagaaggttattga 21472010  T
Q  127 agacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaac 196  Q
    ||| |||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21472011 agaaaatacaaagtgacgaaa-ttcatttcaagttcctaggagttttcatacggaagaacgatcgaaaac 21472079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 28 - 196
Target Start/End: Original strand, 7142215 - 7142382
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||||||| || |||||||| |||||||||| ||||||||||| ||||||||||| |||||||||||||||  || ||| || |||  |||||||||||    
T  7142215 ttttgtagtgagaaatcatgtaaatcgacaaatcaagacatcacgtgaaggatcaaagatatgaagattgaa-ttcgatggtttttaataggtttttgaa 7142313  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaac 196  Q
    || |||||||| | |||||||| |||| |||||||||||||  | ||||||||||||||||||||||||    
T  7142314 gagaatacaaattaaagaaaatccattgcaagttcctaggatatgtcagacggaagaacgatcgaaaac 7142382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 28 - 189
Target Start/End: Original strand, 315293 - 315450
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaaga-ttgaagatcaatgattcttagaaggtttttga 126  Q
    ||||||||||||||||||||| ||||   ||| ||||||||||  ||||||||||| |||  ||||| ||||||| |||   ||||| ||||||| ||||    
T  315293 ttttgtagtaaggaatcatgtaaatc---aaatcaagacatcatgtgaaggatcaaagat--gaagagttgaagaacaacagttctttgaaggttgttga 315387  T
Q  127 agacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgat 189  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||    
T  315388 agacaatacaaagtgaataaaattcatttcaagttcctaggagtttccagacgaaagaacgat 315450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 28 - 165
Target Start/End: Original strand, 23125017 - 23125154
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    |||| |||| || |||||||| ||||||| || ||||||||||  ||||||||| |||||||||||||||||| |||||| |||||| ||| || || ||    
T  23125017 ttttctagtgagaaatcatgtaaatcgaccaatcaagacatcatgtgaaggatcgaggatatgaagattgaagttcaatggttcttataagattcttaaa 23125116  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttccta 165  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  23125117 gacaatacaaagtgaagaaaattcatttcaaattccta 23125154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 82 - 197
Target Start/End: Complemental strand, 10670518 - 10670404
Alignment:
Q  82 aaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacgga 181  Q
    |||||||||||||| |||| |||||| |||||||||||||||  |||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||    
T  10670518 aaggatatgaagatcgaag-tcaatggttcttagaaggttttctaagacaatacaaagtgaataaaaatcatttcaagttcgtaggagttttcagacgga 10670420  T
Q  182 agaacgatcgaaaacg 197  Q
    ||| ||| | ||||||    
T  10670419 agatcgaccaaaaacg 10670404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 28 - 179
Target Start/End: Complemental strand, 22067802 - 22067650
Alignment:
Q  28 ttttgtagtaaggaatcat--gttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaaga-ttgaagatcaatgattcttagaaggttttt 124  Q
    ||||||||| |||||||||  || ||||  |||| ||||||||||  |||||||||||||||  ||| | ||||| ||||| | ||||||||||||| ||    
T  22067802 ttttgtagtgaggaatcatatgtaaatcatcaaatcaagacatcatgtgaaggatcaaggat--gaacaattgaaaatcaagggttcttagaaggttgtt 22067705  T
Q  125 gaagacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacg 179  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||| |||||    
T  22067704 gaagacaatacaaagtgaaaagaattcatttcaagttcctaggagtttttagacg 22067650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 196
Target Start/End: Complemental strand, 2630474 - 2630307
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaaga-ttgaagatcaatgattcttagaaggtttttga 126  Q
    ||||||||| ||||||||||| ||||  |||| ||||||||||  ||||| |||||||||  ||||| ||||||||||| | ||||||   |||| || |    
T  2630474 ttttgtagtgaggaatcatgtaaatcatcaaatcaagacatcatgtgaagaatcaaggat--gaagaattgaagatcaagggttcttaattggttgttaa 2630377  T
Q  127 agacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaac 196  Q
    |||||||| ||| |||||| |||| |||||||||||||||||||||||||  | ||||||||||||||||    
T  2630376 agacaataaaaattgaagacaattaatttcaagttcctaggagttttcaggagaaagaacgatcgaaaac 2630307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 73 - 195
Target Start/End: Original strand, 18496726 - 18496848
Alignment:
Q  73 tgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagttt 172  Q
    |||||||||||||||||||||||||||||  |||| ||||||||| ||| ||||||| |||||||  |||||||||||||||||||||||| |||  |||    
T  18496726 tgaaggatcaaggatatgaagattgaagaataatggttcttagaatgttgttgaagaaaatacaagatgaagaaaattcatttcaagttccaaggcattt 18496825  T
Q  173 tcagacggaagaacgatcgaaaa 195  Q
      ||||| ||||||| |||||||    
T  18496826 caagacgtaagaacggtcgaaaa 18496848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 195
Target Start/End: Original strand, 1074569 - 1074736
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    |||| |||| || |||||||| ||| |  ||| ||||||||||  | |||||||||||||||||| |||||||| ||||| |||||| |||||| |||||    
T  1074569 ttttttagtgagaaatcatgtaaattggaaaagcaagacatcaagtaaaggatcaaggatatgaaaattgaagaccaatggttcttaaaaggttgttgaa 1074668  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaa 195  Q
    ||||||||||  ||||||||| | |||||||||||| ||   |||  ||||||||||||||| |||||    
T  1074669 gacaatacaagatgaagaaaagtaatttcaagttccaagacatttcaagacggaagaacgatagaaaa 1074736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 39 - 182
Target Start/End: Complemental strand, 7778026 - 7777885
Alignment:
Q  39 ggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaa 138  Q
    |||||||||| |||| ||||| ||||||||||| ||||||||||| |||||||| |||||| |  |||| |||||| |||||| |||| ||||||| |||    
T  7778026 ggaatcatgtaaatcaacaaagcaagacatcacgtgaaggatcaacgatatgaa-attgaaaactaatg-ttcttaaaaggttgttgaggacaatataaa 7777929  T
Q  139 gtgaagaaaattcatttcaagttcctaggagttttcagacggaa 182  Q
    |||||||||| ||||  |||||||||| ||||||| ||||||||    
T  7777928 gtgaagaaaaatcataccaagttcctaagagtttttagacggaa 7777885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 143
Target Start/End: Original strand, 30405710 - 30405825
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    |||| |||| || |||||||| ||||| ||||  |||| ||||  ||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||    
T  30405710 ttttttagtgagaaatcatgtaaatcggcaaaataagaaatcatgtgaaggatcgaggatatgaagattgaagttcaatgattcttagaaggtatttgaa 30405809  T
Q  128 gacaatacaaagtgaa 143  Q
     |||||||||||||||    
T  30405810 tacaatacaaagtgaa 30405825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 41 - 129
Target Start/End: Complemental strand, 9761400 - 9761313
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaaga 129  Q
    |||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||| |||||| ||||||||| ||||    
T  9761400 aatcatgtaaatcgacaaatcaagacatcacgtgaaggatcaaggatatgaagattgaag-tcaatggttcttaaaaggtttttaaaga 9761313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 9070505 - 9070646
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||| ||| || |||||||| ||| ||| ||  |||||||| | |||||||||||||||||||| || ||| |||||   |||||||||||||||| ||    
T  9070505 ttttgaagtgagaaatcatgtaaattgacgaataaagacatcgcgtgaaggatcaaggatatgaatatcgaa-atcaagtgttcttagaaggttttttaa 9070603  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcctaggagt 170  Q
    ||||||| ||||||||||| ||||| ||||||||| |||||||    
T  9070604 gacaatataaagtgaagaatattcagttcaagttcgtaggagt 9070646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 41 - 163
Target Start/End: Complemental strand, 24596989 - 24596867
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 140  Q
    |||| ||| ||||| |||| ||||||||||| || | |||| ||||||| |||||||||| ||| || ||| ||||||   |||||||||||||||||||    
T  24596989 aatcgtgtaaatcggcaaaacaagacatcacgtggaagatcgaggatataaagattgaagttcagtggttcatagaagaaatttgaagacaatacaaagt 24596890  T
Q  141 gaagaaaattcatttcaagttcc 163  Q
    ||||||||||||||| |||||||    
T  24596889 gaagaaaattcatttgaagttcc 24596867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 134
Target Start/End: Complemental strand, 12358711 - 12358655
Alignment:
Q  78 gatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaata 134  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12358711 gatcaaggatatgaagattgaagatcaatggttcttagaaggtttttgaagacaata 12358655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 41 - 160
Target Start/End: Complemental strand, 4977805 - 4977687
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 140  Q
    |||||||| |||  ||||| ||||||||||||||||||||| ||||||||||||||||||  | ||| || |||||||  ||||||||| |||||||| |    
T  4977805 aatcatgtaaatatacaaatcaagacatcacatgaaggatcgaggatatgaagattgaag-gctatggtttttagaagacttttgaagaaaatacaaaat 4977707  T
Q  141 gaagaaaattcatttcaagt 160  Q
    ||| ||||||||||| ||||    
T  4977706 gaacaaaattcatttgaagt 4977687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 56 - 185
Target Start/End: Original strand, 20446347 - 20446475
Alignment:
Q  56 caaaccaagacatcacatgaaggatcaaggatatgaaga-ttgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatt 154  Q
    |||| ||||||||||  ||||||||||| |||  ||||| ||||||||||| | ||||||||||||| ||||||||||||||||||||| |||| |||||    
T  20446347 caaatcaagacatcaagtgaaggatcaaagat--gaagaattgaagatcaagggttcttagaaggttgttgaagacaatacaaagtgaaaaaaaatcatt 20446444  T
Q  155 tcaagttcctaggagttttcagacggaagaa 185  Q
    | |||||| || |||| |||| | |||||||    
T  20446445 ttaagttcataagagtattcaaatggaagaa 20446475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 20461633 - 20461511
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttga--agacaatacaaa 138  Q
    |||||||| ||||| ||||  |||||||||  ||||||||||||||||||||||||||||| ||  |||||||  ||||| ||| |  ||||||||||||    
T  20461633 aatcatgtaaatcggcaaaataagacatcaagtgaaggatcaaggatatgaagattgaagaccaccgattcttgcaaggtattttaagagacaatacaaa 20461534  T
Q  139 gtgaagaaaattcatttcaagtt 161  Q
    |||||| |||||| |||||||||    
T  20461533 gtgaagtaaattcctttcaagtt 20461511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 41 - 168
Target Start/End: Complemental strand, 22532629 - 22532503
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 140  Q
    |||||||| ||||| ||||| |||||||||||||| ||||| |||||| ||||| |||| ||||||| ||||||||| ||||||||||||||| |||  |    
T  22532629 aatcatgtaaatcggcaaac-aagacatcacatgatggatcgaggatacgaagaatgaatatcaatggttcttagaaagtttttgaagacaatccaagtt 22532531  T
Q  141 gaagaaaattcatttcaagttcctagga 168  Q
       |||||||||| ||||||||| ||||    
T  22532530 atggaaaattcatctcaagttccaagga 22532503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 73 - 189
Target Start/End: Original strand, 7493475 - 7493590
Alignment:
Q  73 tgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagttt 172  Q
    |||||| ||||| ||||| | |||||||||||| | |||||| |||||| ||||||| |||||||| |||| |||||||||| ||| || ||||||||||    
T  7493475 tgaaggttcaagaatatgga-attgaagatcaagggttcttaaaaggttattgaagataatacaaaatgaaaaaaattcattccaaatttctaggagttt 7493573  T
Q  173 tcagacggaagaacgat 189  Q
    ||| | |||||||||||    
T  7493574 tcaaagggaagaacgat 7493590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 163
Target Start/End: Complemental strand, 3487351 - 3487231
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 140  Q
    |||||||| ||||| |||| |||||||||| |||||||||||| ||||| ||||| ||| ||||| || ||| |||||   ||| |||||||||||||||    
T  3487351 aatcatgtgaatcggcaaaacaagacatcaaatgaaggatcaatgatataaagatcgaacatcaacgactctcagaagacattttaagacaatacaaagt 3487252  T
Q  141 gaagaaaattcatttcaagttcc 163  Q
    ||||  ||||||||| |||||||    
T  3487251 gaag--aattcatttgaagttcc 3487231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 148
Target Start/End: Complemental strand, 5312739 - 5312664
Alignment:
Q  73 tgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaa 148  Q
    ||||||||||||||||||| ||||||| || |||| |||||||||| ||||||||||||||||||  |||||||||    
T  5312739 tgaaggatcaaggatatgaggattgaacataaatggttcttagaagatttttgaagacaatacaagatgaagaaaa 5312664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 7372522 - 7372434
Alignment:
Q  71 catgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagtt 161  Q
    ||||||||||||||||||| ||| | |||| ||||||| ||||||||| ||||| |||||||||| |||||||||||||| ||||||||||    
T  7372522 catgaaggatcaaggatataaagctggaagttcaatga-tcttagaagatttttaaagacaatac-aagtgaagaaaatttatttcaagtt 7372434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 33 - 163
Target Start/End: Complemental strand, 8309025 - 8308899
Alignment:
Q  33 tagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaa 132  Q
    ||||||| |||||||| ||||  |||| ||||||||||| ||||| ||||||| ||||     || | ||||||| |||||||||||| |||||||||||    
T  8309025 tagtaagaaatcatgtaaatcagcaaaacaagacatcacgtgaagaatcaaggttatgg----tggaaatcaatggttcttagaaggtctttgaagacaa 8308930  T
Q  133 tacaaagtgaagaaaattcatttcaagttcc 163  Q
    |||||| | ||||| |||||| |||||||||    
T  8308929 tacaaaataaagaagattcatatcaagttcc 8308899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 170
Target Start/End: Original strand, 10292870 - 10293011
Alignment:
Q  27 attttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaag-attgaagatcaatgattcttagaaggtttttg 125  Q
    |||||||||| ||||||||||| ||||  |||| ||||||||||  |||||||| ||||  |||||| | |||||||||| | |||||||||||| ||||    
T  10292870 attttgtagtgaggaatcatgtaaatcatcaaatcaagacatcatgtgaaggataaagg--atgaagaactgaagatcaagggttcttagaaggtgtttg 10292967  T
Q  126 aagacaatacaaagtgaagaaaattcatttcaagttcctaggagt 170  Q
    || |||||| |||| ||||||||   |||| ||||||||||||||    
T  10292968 aatacaataaaaagggaagaaaa-caatttaaagttcctaggagt 10293011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 137
Target Start/End: Complemental strand, 3268951 - 3268855
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaa 137  Q
    |||||||| ||||| |||| ||||| |||||||||||||||||| ||||||||| |||| || ||||||||||| ||| |||||  | |||||||||    
T  3268951 aatcatgtaaatcggcaaaacaagatatcacatgaaggatcaagtatatgaagaatgaaaattaatgattcttaaaagctttttataaacaatacaa 3268855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 41 - 195
Target Start/End: Complemental strand, 2353227 - 2353072
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaa-ggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaag 139  Q
    |||||||| |||||||||| ||||||||| ||||| ||||||| |||| |||| | |||||||||||| || ||||||||| |||  ||||||||||       
T  2353227 aatcatgtaaatcgacaaagcaagacatctcatgatggatcaatggatgtgaaaaatgaagatcaatggttattagaaggtgtttatagacaatacatga 2353128  T
Q  140 tgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaa 195  Q
    |||  ||||||||| ||||||||  |||  |||  |||||||||| || |||||||    
T  2353127 tgagaaaaattcatctcaagttctaaggcttttcaagacggaagatcgctcgaaaa 2353072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 163
Target Start/End: Original strand, 4828918 - 4829039
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 140  Q
    ||||||||  ||||| ||| ||||| || ||| || ||||| |||||| |||||   ||  |||||||| |||||||| | |||||||||||||||||||    
T  4828918 aatcatgtagatcgaaaaaacaagatattacacgacggatcgaggataagaagacgaaaattcaatgat-cttagaagttatttgaagacaatacaaagt 4829016  T
Q  141 gaagaaaattcatttcaagttcc 163  Q
    ||||| |||||||||||||||||    
T  4829017 gaagataattcatttcaagttcc 4829039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 137
Target Start/End: Original strand, 14649663 - 14649721
Alignment:
Q  79 atcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaa 137  Q
    |||||||||||||| | |||||||||||| || ||||||||||||||||||||||||||    
T  14649663 atcaaggatatgaataatgaagatcaatggttattagaaggtttttgaagacaatacaa 14649721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 138
Target Start/End: Original strand, 46054840 - 46054921
Alignment:
Q  56 caaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaa 138  Q
    |||| |||||| |||||| |||||| || |||||||||||||||||| ||||| ||||| || ||| ||||||||||||||||    
T  46054840 caaaacaagacgtcacataaaggattaaagatatgaagattgaagattaatga-tcttacaaagttgttgaagacaatacaaa 46054921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 10253677 - 10253629
Alignment:
Q  89 tgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaa 137  Q
    ||||||||||||||||||||| |||| | ||||||||||||||||||||    
T  10253677 tgaagattgaagatcaatgatacttatagggtttttgaagacaatacaa 10253629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 104
Target Start/End: Complemental strand, 1255189 - 1255135
Alignment:
Q  50 aatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatca 104  Q
    |||| ||||| ||| |||||||||||||||||||||||| ||||| |||||||||    
T  1255189 aatcaacaaatcaaaacatcacatgaaggatcaaggatacgaagaatgaagatca 1255135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 9761316 - 9761263
Alignment:
Q  142 aagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaa 195  Q
    ||||||||||||||||||||||||||||||| || |  |||||| |||||||||    
T  9761316 aagaaaattcatttcaagttcctaggagtttccaaatagaagaatgatcgaaaa 9761263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 116
Target Start/End: Original strand, 9755910 - 9755997
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttaga 116  Q
    |||| |||| || |||||||  |||||||||| | ||||||||  ||||||||||| |||||||||||| |||| |||||||| |||||    
T  9755910 ttttctagtgagaaatcatgcaaatcgacaaatctagacatcatgtgaaggatcaacgatatgaagattaaaga-caatgatttttaga 9755997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 163
Target Start/End: Original strand, 25706303 - 25706405
Alignment:
Q  61 caagacatcacatgaaggatcaagg-atatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaag 159  Q
    ||||||| | ||||||||||||||| || | |||| |||||| ||||| ||||| |||||||||||||||||||| ||  ||  ||||||||||  ||||    
T  25706303 caagacacctcatgaaggatcaagggatttaaagagtgaaga-caatggttcttggaaggtttttgaagacaatataagttggggaaaattcatcccaag 25706401  T
Q  160 ttcc 163  Q
    ||||    
T  25706402 ttcc 25706405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 122; Significance: 1e-62; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 28 - 197
Target Start/End: Original strand, 15192320 - 15192488
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||||||| || |||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||| ||||||||||||| |||||    
T  15192320 ttttgtagtgagaaatcatgtaaatcgacaaaccaagacatcacgtgaaggatcaaggatatgaa-attgaagaccaatggttcttagaaggttgttgaa 15192418  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 197  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15192419 gacaattcaaagtgaagacaattcatttcaagttcctaggagtttttagacggaagaacgatcgaaaacg 15192488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 28 - 196
Target Start/End: Complemental strand, 47024763 - 47024596
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||||||| || |||||||| |||||| ||| ||||||||| |||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||    
T  47024763 ttttgtagtgagaaatcatgtaaatcgaaaaatcaagacatcgcatgaaggatcaaggacatgaagattgaag-tcaatggttcttagaaggtttttgaa 47024665  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaac 196  Q
     ||| ||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  47024664 aacagtacaaagtgaagagaatttatttcaagttcctaggagttttcagatggaagaacgatcgaaaac 47024596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 28 - 197
Target Start/End: Original strand, 18898099 - 18898267
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||||||| || |||||||| |||||||||| ||||||||||||||||||||| ||| |||| ||||||||| ||| || |||||| ||||||||||||    
T  18898099 ttttgtagtgagaaatcatgtaaatcgacaaatcaagacatcacatgaaggatccagggtatgcagattgaag-tcagtggttcttaaaaggtttttgaa 18898197  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 197  Q
     |||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  18898198 tacaatacaaagtaaagaaaattcatttcaagttcctaggatttttcagacgtaagaacgatcgaaaacg 18898267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 27 - 197
Target Start/End: Original strand, 27302893 - 27303062
Alignment:
Q  27 attttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttga 126  Q
    |||||||||| | ||||||||| ||||||||||  |||||||||| || | ||||||||||||||| |||||| || || | ||||||||||||||||||    
T  27302893 attttgtagtgatgaatcatgtaaatcgacaaattaagacatcacgtgcaagatcaaggatatgaa-attgaacattaagggttcttagaaggtttttga 27302991  T
Q  127 agacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 197  Q
    ||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  27302992 agacattataaagtgaagaaaattcattttaagttcctaggagttttcagacggaagaacgatcgaaaacg 27303062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 28 - 196
Target Start/End: Complemental strand, 34864293 - 34864126
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||||||| || |||||||| |||||||||| ||||||||||| ||||||||||| |||||| ||||||||| |||||| ||||||||||||||||| |    
T  34864293 ttttgtagtgagaaatcatgtaaatcgacaaatcaagacatcacgtgaaggatcaaagatatggagattgaag-tcaatggttcttagaaggtttttgta 34864195  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaac 196  Q
    ||||||||||| |||||||||||||||| |||||||||| |||||||||| |||| || ||||||||||    
T  34864194 gacaatacaaaatgaagaaaattcatttaaagttcctagaagttttcagatggaaaaatgatcgaaaac 34864126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 65 - 224
Target Start/End: Original strand, 51884756 - 51884914
Alignment:
Q  65 acatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcct 164  Q
    ||||||||||||||||||| |||||||| |||||||||||| |  ||||||||| || ||||| |||||||||||||||||||||| |||||||||||||    
T  51884756 acatcacatgaaggatcaaagatatgaa-attgaagatcaagggctcttagaagattgttgaatacaatacaaagtgaagaaaattaatttcaagttcct 51884854  T
Q  165 aggagttttcagacggaagaacgatcgaaaacgcaagaattcgcacgtgaggggttgcct 224  Q
    | ||||||||||||||||||||||||||||||||||||| ||| ||  ||||||||||||    
T  51884855 atgagttttcagacggaagaacgatcgaaaacgcaagaaatcgtaccggaggggttgcct 51884914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 27 - 197
Target Start/End: Original strand, 5676315 - 5676485
Alignment:
Q  27 attttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttga 126  Q
    ||||| |||| | ||||||||| ||| || ||| ||||||||||||||||||||||||||||| ||| ||||| |  |||||||||||||||||||||||    
T  5676315 attttttagtgatgaatcatgtaaattgataaatcaagacatcacatgaaggatcaaggatattaagtttgaatacaaatgattcttagaaggtttttga 5676414  T
Q  127 agacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 197  Q
    |||||||||||  ||||||||||||||||| |||| ||||||||||  |||||||||||| ||||||||||    
T  5676415 agacaatacaagatgaagaaaattcatttcgagttactaggagtttctagacggaagaacaatcgaaaacg 5676485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 28 - 186
Target Start/End: Complemental strand, 17026694 - 17026537
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||||||| |  |||||||| ||||||||||  ||||||||||||||||||||||| ||||||  ||| ||| | |||| |||||| || |||||||||    
T  17026694 ttttgtagtcataaatcatgtaaatcgacaaattaagacatcacatgaaggatcaagtatatgagaatttaagtt-aatggttcttaaaaagtttttgaa 17026596  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaac 186  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  17026595 gacaatacaaagtgaagaaaattaatttcaagttcctaggagtttccagacggaagaac 17026537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 40 - 197
Target Start/End: Complemental strand, 12111312 - 12111157
Alignment:
Q  40 gaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaag 139  Q
    ||||| ||| |||||||||| |||| |||||| |||||||||||| ||||||| ||||||| |||||| |||||| ||||||||| |||| |||||||||    
T  12111312 gaatcttgtaaatcgacaaatcaagtcatcacgtgaaggatcaag-atatgaatattgaag-tcaatggttcttataaggttttttaagataatacaaag 12111215  T
Q  140 tgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 197  Q
    |||||||||||||||||||||| ||||||||||||| || |||||| |||||||||||    
T  12111214 tgaagaaaattcatttcaagtttctaggagttttcaaacagaagaatgatcgaaaacg 12111157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 29 - 189
Target Start/End: Complemental strand, 25315228 - 25315069
Alignment:
Q  29 tttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaag 128  Q
    |||||||| ||||||||||| |||||||||| ||||||||| |||||||||||||||||||||| ||| ||||| |||| |||||| || ||| ||||||    
T  25315228 tttgtagtgaggaatcatgtaaatcgacaaatcaagacatcgcatgaaggatcaaggatatgaa-attaaagataaatggttcttaaaatgttgttgaag 25315130  T
Q  129 acaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgat 189  Q
    |||||||||  | ||| |||||||||||||||||||| |||||| || |||||||||||||    
T  25315129 acaatacaagataaagtaaattcatttcaagttcctaagagtttccatacggaagaacgat 25315069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 41 - 196
Target Start/End: Complemental strand, 5906748 - 5906593
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 140  Q
    |||||||| || ||||||||||||| ||||||||||||||| || |||| |||||| ||||| |||| ||||||||||||||||||||| ||||||||||    
T  5906748 aatcatgtaaaccgacaaaccaagatatcacatgaaggatctagaatattaagatttaagattaatggttcttagaaggtttttgaagataatacaaagt 5906649  T
Q  141 gaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaac 196  Q
     ||||||||||||||||| ||| ||  | ||| ||||| |||||||||||||||||    
T  5906648 taagaaaattcatttcaaattcataaaaatttccagacagaagaacgatcgaaaac 5906593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 41 - 187
Target Start/End: Complemental strand, 31859886 - 31859740
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 140  Q
    |||||||| ||||  |||| ||||||| ||  ||||||||| |||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||    
T  31859886 aatcatgtaaatcagcaaaacaagacaccaggtgaaggatcgaggatatgaatattgaagatcaatggttcttagaaggtatttgaagacaatacaaagt 31859787  T
Q  141 gaagaaaattcatttcaagttcctaggagttttcagacggaagaacg 187  Q
    |||||||||| |||||||||||| |||  |||  |||||||||||||    
T  31859786 gaagaaaatttatttcaagttccaaggcatttcaagacggaagaacg 31859740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 61 - 189
Target Start/End: Complemental strand, 1695811 - 1695684
Alignment:
Q  61 caagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagt 160  Q
    ||||||||||  |||| |||||| ||||||||||||||| || ||  |||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  1695811 caagacatcatgtgaatgatcaacgatatgaagattgaa-ataaaacattcttagaaggttgttgaagacaatacaaagtgaataaaattcatttcaagt 1695713  T
Q  161 tcctaggagttttcagacggaagaacgat 189  Q
    |||||||||||| || ||| |||||||||    
T  1695712 tcctaggagtttacaaacgaaagaacgat 1695684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 28 - 192
Target Start/End: Complemental strand, 10320217 - 10320055
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||||||| || ||||| || ||| |||||| || ||||| |||||||||||||||||| |||| ||||||| | |||| || ||||||||| || |||    
T  10320217 ttttgtagtgagaaatcaggtaaattgacaaatca-gacataacatgaaggatcaaggatgtgaaaattgaagtt-aatggttgttagaaggtcttcgaa 10320120  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcga 192  Q
     |||||||||||||||||||||| ||||||||||||||||||||| |||| || |||||||||||    
T  10320119 aacaatacaaagtgaagaaaatttatttcaagttcctaggagtttccagaaggtagaacgatcga 10320055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 41 - 163
Target Start/End: Original strand, 23353751 - 23353869
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 140  Q
    |||||||| ||||| |||| ||||||||||||||||||| |||||||||||||||| |||||||||  ||   ||||||| ||| |||||||||||||||    
T  23353751 aatcatgtaaatcggcaaaacaagacatcacatgaagga-caaggatatgaagattaaagatcaatagtt---agaaggtcttttaagacaatacaaagt 23353846  T
Q  141 gaagaaaattcatttcaagttcc 163  Q
    |||||||||||||||||||||||    
T  23353847 gaagaaaattcatttcaagttcc 23353869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 28 - 163
Target Start/End: Original strand, 19601915 - 19602049
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    |||| |||| || |||||||| |||| ||||| ||||||||||| |||| |||| ||||||||| ||||||||| ||||| |||||| ||||||||||||    
T  19601915 ttttctagtgagaaatcatgtaaatcaacaaatcaagacatcacgtgaaagatcgaggatatgatgattgaaga-caatggttcttaaaaggtttttgaa 19602013  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcc 163  Q
    ||||||| |||||| ||||||||||||||| |||||    
T  19602014 gacaataaaaagtggagaaaattcatttcatgttcc 19602049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 33 - 163
Target Start/End: Original strand, 13064547 - 13064677
Alignment:
Q  33 tagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaa 132  Q
    ||||||| |||||||| ||| | |||| ||||||||||| |||||||||||||||| || |||||||| |||||| |||||||| ||| |||||||||||    
T  13064547 tagtaagaaatcatgtaaattggcaaatcaagacatcacgtgaaggatcaaggataagacgattgaagttcaatggttcttagagggtatttgaagacaa 13064646  T
Q  133 tacaaagtgaagaaaattcatttcaagttcc 163  Q
    | ||||||||| ||| || ||||||||||||    
T  13064647 ttcaaagtgaacaaatttgatttcaagttcc 13064677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 41 - 187
Target Start/End: Original strand, 33519159 - 33519305
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 140  Q
    |||||||| ||||| |||| ||| ||||| | ||||| ||  ||||||||| ||||||||||||||  |||||||||||| ||||||||||||||||  |    
T  33519159 aatcatgtgaatcggcaaatcaaaacatctcttgaagaattgaggatatgacgattgaagatcaatcgttcttagaaggtctttgaagacaatacaagtt 33519258  T
Q  141 gaagaaaattcatttcaagttcctaggagttttcagacggaagaacg 187  Q
    |||||||||||||||||| |||| |||  ||| ||||| ||||||||    
T  33519259 gaagaaaattcatttcaaattccaaggcatttccagacagaagaacg 33519305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 17187302 - 17187422
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 140  Q
    |||||||| ||||||||||  || ||||||  |||| |||  |||||||||||||||||| ||| || |||||||||| | |||||||||||||||||||    
T  17187302 aatcatgtaaatcgacaaaataacacatcaagtgaatgattgaggatatgaagattgaagttcagtggttcttagaagttatttgaagacaatacaaagt 17187401  T
Q  141 gaagaaaattcatttcaagtt 161  Q
     ||||||||||||||||||||    
T  17187402 aaagaaaattcatttcaagtt 17187422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 56 - 162
Target Start/End: Complemental strand, 7024189 - 7024083
Alignment:
Q  56 caaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcattt 155  Q
    |||| ||||||||||| ||||||||||| ||||||||||||||||| ||||| |||||||||| || ||||||| |||||||  |||||||||||||| |    
T  7024189 caaaacaagacatcacgtgaaggatcaaagatatgaagattgaagaccaatggttcttagaagattcttgaagataatacaagatgaagaaaattcatat 7024090  T
Q  156 caagttc 162  Q
     ||||||    
T  7024089 aaagttc 7024083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 164
Target Start/End: Complemental strand, 9782981 - 9782847
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaaga-ttgaagatcaatgattcttagaaggtttttga 126  Q
    ||||||||| ||||||||||| |||| ||||| ||||||||||  || |||||||| |||  ||||| ||||||||||| | ||||||||||||| || |    
T  9782981 ttttgtagtgaggaatcatgtaaatcaacaaatcaagacatcatgtggaggatcaaagat--gaagaattgaagatcaagggttcttagaaggttgttaa 9782884  T
Q  127 agacaatacaaagtgaagaaaattcatttcaagttcct 164  Q
    | | ||| ||||||||||||||||||||||||||||||    
T  9782883 aaa-aatgcaaagtgaagaaaattcatttcaagttcct 9782847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 194
Target Start/End: Original strand, 26159900 - 26160036
Alignment:
Q  56 caaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcattt 155  Q
    |||| ||||||||||  ||||||||  ||||||||||||||||||||||||| |||||| ||||| ||||||  ||| | ||  ||||||||||||||||    
T  26159900 caaaacaagacatcatgtgaaggattcaggatatgaagattgaagatcaatggttcttataaggtctttgaaatcaa-ataagttgaagaaaattcattt 26159998  T
Q  156 caagttcctaggagttttcagacggaagaacgatcgaaa 194  Q
    |||||||| |||| |||  ||||||||||||| ||||||    
T  26159999 caagttccaagga-tttcaagacggaagaacgctcgaaa 26160036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 73 - 163
Target Start/End: Original strand, 22119782 - 22119871
Alignment:
Q  73 tgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcc 163  Q
    |||||||| ||||||||||| |||||||||||||| |||||||| ||||||||| ||||||| |||||| | |||||| ||||||||||||    
T  22119782 tgaaggattaaggatatgaatattgaagatcaatggttcttagagggtttttgaggacaata-aaagtgtacaaaattaatttcaagttcc 22119871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 41 - 130
Target Start/End: Original strand, 9288339 - 9288428
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagac 130  Q
    |||||||| ||||| |||| ||||||||||  ||||||||||||||||||||||||||||| ||||| ||||||| ||||| || |||||    
T  9288339 aatcatgtaaatcggcaaaacaagacatcaagtgaaggatcaaggatatgaagattgaagaccaatggttcttagcaggttgttaaagac 9288428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 49 - 133
Target Start/End: Complemental strand, 17339792 - 17339707
Alignment:
Q  49 taatcgacaaaccaagacatcacatgaaggatcaag-gatatgaagattgaagatcaatgattcttagaaggtttttgaagacaat 133  Q
    ||||||||||| ||||| |||||||||||||||||| |||||| ||| ||||||||| ||||||||| ||| ||||||||||||||    
T  17339792 taatcgacaaagcaagatatcacatgaaggatcaagagatatggagaatgaagatcagtgattcttaaaagatttttgaagacaat 17339707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 163
Target Start/End: Original strand, 29437600 - 29437712
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 140  Q
    |||||||| ||||| |||  ||||||||||| ||||||||| |||||||||||||||||| |||||| ||||||          ||||||||||||||||    
T  29437600 aatcatgtaaatcggcaagacaagacatcacgtgaaggatcgaggatatgaagattgaagttcaatggttctta----------gaagacaatacaaagt 29437689  T
Q  141 gaagaaaattcatttcaagttcc 163  Q
    ||||||| ||||||| |||||||    
T  29437690 gaagaaacttcatttgaagttcc 29437712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 41 - 163
Target Start/End: Original strand, 21077362 - 21077484
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 140  Q
    |||||||| ||| | |||| ||||||| ||  || |||||| | | ||||| ||||||| ||||||| ||||||||||||  | |||||||||||||| |    
T  21077362 aatcatgtaaattggcaaaacaagacaccaagtggaggatcgaagttatgaggattgaatatcaatggttcttagaaggtaatcgaagacaatacaaatt 21077461  T
Q  141 gaagaaaattcatttcaagttcc 163  Q
    ||| |||||||||||||||||||    
T  21077462 gaataaaattcatttcaagttcc 21077484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 46647339 - 46647420
Alignment:
Q  56 caaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaa 137  Q
    |||| ||||||||||| ||| ||||||| |||||||| | |||||||||||| |||||| ||||||||| |||| |||||||    
T  46647339 caaaacaagacatcacgtgagggatcaaagatatgaaaaatgaagatcaatggttcttaaaaggtttttaaagataatacaa 46647420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 10576602 - 10576678
Alignment:
Q  61 caagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaa 137  Q
    ||||||||||  ||||||||| |||||||||||| | |||| | |||||| ||||||||||||||||| ||| ||||    
T  10576602 caagacatcatgtgaaggatcgaggatatgaagaataaagaactatgatttttagaaggtttttgaaggcaacacaa 10576678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 32021954 - 32022018
Alignment:
Q  72 atgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaa 137  Q
    ||||||||||||| ||||||||| |||||||||||| |||  | |||| |||||||||||||||||    
T  32021954 atgaaggatcaagtatatgaagaatgaagatcaatggttccaaaaagg-ttttgaagacaatacaa 32022018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 4732954 - 4733002
Alignment:
Q  110 tcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaa 158  Q
    ||||||||||| ||| ||||||||||||  |||||||||||||||||||    
T  4732954 tcttagaaggtctttaaagacaatacaagttgaagaaaattcatttcaa 4733002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 137
Target Start/End: Complemental strand, 13275730 - 13275631
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaagg-atatgaagat--tgaagatcaatgattcttagaaggtttttgaagacaatacaa 137  Q
    |||||||| | ||| |||| ||| ||| |||| ||||||| |||| ||||||| ||  |||||||||||| ||||| |||| ||||||||||||||||||    
T  13275730 aatcatgtaattcggcaaagcaatacaccacacgaaggattaagggatatgaatataatgaagatcaatggttctttgaagttttttgaagacaatacaa 13275631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 113
Target Start/End: Original strand, 18444381 - 18444451
Alignment:
Q  43 tcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattctt 113  Q
    |||||| ||||  |||| ||||||||||| ||||||||| | ||||  ||||||||||||||||| |||||    
T  18444381 tcatgtaaatctgcaaaacaagacatcacgtgaaggatcgatgatacaaagattgaagatcaatggttctt 18444451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 53001115 - 53001069
Alignment:
Q  89 tgaagattgaagatcaatgattcttagaaggtttttgaagacaatac 135  Q
    |||||| || ||||||||||| ||||||||| |||||||||||||||    
T  53001115 tgaagaatggagatcaatgatacttagaaggcttttgaagacaatac 53001069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 155
Target Start/End: Complemental strand, 20985297 - 20985264
Alignment:
Q  122 tttgaagacaatacaaagtgaagaaaattcattt 155  Q
    ||||||||||||||||||||||||||| ||||||    
T  20985297 tttgaagacaatacaaagtgaagaaaactcattt 20985264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 116; Significance: 5e-59; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 28 - 203
Target Start/End: Complemental strand, 11274328 - 11274153
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    |||||||||||| ||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||    
T  11274328 ttttgtagtaagaaatcatgtatatcgacaaatcaagacatcacatgaaggatcaaggatatgaagattgaagaccaatggttcttagaaggtctttgaa 11274229  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacgcaagaa 203  Q
    ||||||||||  ||| |||| |||||||||||||||||||||||||||  |||||||||||| |||||| ||||||    
T  11274228 gacaatacaagatgatgaaatttcatttcaagttcctaggagttttcatgcggaagaacgattgaaaacacaagaa 11274153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 41 - 190
Target Start/End: Complemental strand, 26330054 - 26329906
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 140  Q
    |||||||| ||| || ||| |||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||| |||||||||||||||    
T  26330054 aatcatgtaaattgaaaaatcaagacatcacatgaaggatcaaggatatgaagattgaag-tcaatggtccttagaaggttttttaagacaatacaaagt 26329956  T
Q  141 gaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatc 190  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26329955 gaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatc 26329906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 27 - 202
Target Start/End: Original strand, 22229920 - 22230094
Alignment:
Q  27 attttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttga 126  Q
    |||||||||| ||||||||||| |||| ||||| ||||||||||| ||||||||||| |||||| | |||||||||||| | ||||||||||||| ||||    
T  22229920 attttgtagtgaggaatcatgtaaatcaacaaatcaagacatcacgtgaaggatcaaagatatgga-attgaagatcaagggttcttagaaggttgttga 22230018  T
Q  127 agacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacgcaaga 202  Q
    ||| ||||| ||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22230019 agataataccaagtgaagaaaacacatctcaagttcctaggagttttcagacggaagaacgatcgaaaacgcaaga 22230094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 28 - 189
Target Start/End: Complemental strand, 16622674 - 16622514
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||| ||| || |||||||| ||| |||||| |||||||||||||||||||| |||||||||||||||||||| || || ||||||||||| |||||||    
T  16622674 ttttgcagtgagaaatcatgtaaattgacaaatcaagacatcacatgaaggattaaggatatgaagattgaagaccagtggttcttagaagg-ttttgaa 16622576  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgat 189  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||| |||| |||||||||||    
T  16622575 gacaatacaaattgaagaaaattcatttcaagttcgtaggagtttccagatggaagaacgat 16622514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 41 - 189
Target Start/End: Original strand, 30072245 - 30072393
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 140  Q
    |||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||| |||||| ||||||||| |||||||||||||||    
T  30072245 aatcatattaatcgacaaatcaagacatcacatgaaggatcaaagatatgaagattgaagattaatggttcttaaaaggtttttaaagacaatacaaagt 30072344  T
Q  141 gaagaaaattcatttcaagttcctaggagttttcagacggaagaacgat 189  Q
    ||||||| |||||||||||||| || | |||| || |||||||||||||    
T  30072345 gaagaaatttcatttcaagttcgtatgcgtttccaaacggaagaacgat 30072393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 41 - 195
Target Start/End: Original strand, 17027657 - 17027810
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 140  Q
    |||||||| |||||| ||| ||||||||||| || | |||||| |||||||||||||||| | |||| ||||||||||||| ||||||||||||||||||    
T  17027657 aatcatgtaaatcgaaaaatcaagacatcacgtgcaagatcaaagatatgaagattgaagtt-aatgcttcttagaaggttcttgaagacaatacaaagt 17027755  T
Q  141 gaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaa 195  Q
    |||||||||| ||||||| ||||||||||||| || ||| |||||||||||||||    
T  17027756 gaagaaaattaatttcaatttcctaggagtttccatacgaaagaacgatcgaaaa 17027810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 28 - 186
Target Start/End: Complemental strand, 25594690 - 25594533
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    |||| |||| || |||||||| |||||| |||  ||||||||||||||| |||||||||||||||||||||| |||||||  | |||||||||||||| |    
T  25594690 ttttatagtgagaaatcatgtaaatcgaaaaattaagacatcacatgaacgatcaaggatatgaagattgaatatcaatggatattagaaggtttttgta 25594591  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaac 186  Q
    || ||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  25594590 gataatgcaaagtgaagaaaattca-ttcaagttcctaggagtttccagacggaagaac 25594533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 28 - 203
Target Start/End: Original strand, 24841870 - 24842044
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||||||| || |||||||| ||| || ||| ||||||| ||| ||||||||||||||||||  |||||||| |||||| ||||||||||| |||||||    
T  24841870 ttttgtagtgagaaatcatgtaaattgaaaaatcaagacaacacgtgaaggatcaaggatatgtggattgaag-tcaatggttcttagaaggattttgaa 24841968  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacgcaagaa 203  Q
    ||||| ||||| |||||||||||||||||| |||||||||||||| ||||||  ||||||||  |||||| |||||    
T  24841969 gacaacacaaaatgaagaaaattcatttcatgttcctaggagtttccagacgacagaacgataaaaaacggaagaa 24842044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 28 - 197
Target Start/End: Original strand, 25680704 - 25680872
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    |||||||||||| | |||||| |||||||||||||||| ||||  |||||||||||||||| ||| ||| |||  ||||  ||||||||||||||| |||    
T  25680704 ttttgtagtaagaattcatgtaaatcgacaaaccaagaaatcatgtgaaggatcaaggataagaa-atttaaggccaatagttcttagaaggttttagaa 25680802  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 197  Q
     |||||||||||| |||||||||||||||| ||| |||||||||| ||||||||| ||| ||||||||||    
T  25680803 aacaatacaaagtaaagaaaattcatttcaggtttctaggagtttccagacggaaaaacaatcgaaaacg 25680872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 18452789 - 18452677
Alignment:
Q  49 taatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaa 148  Q
    ||||||||||| ||||||||||||||| ||||||| |||||||| |||||||||||||| |||||| ||||||||| || ||||||||||||||||||||    
T  18452789 taatcgacaaatcaagacatcacatgagggatcaaagatatgaaaattgaagatcaatggttcttataaggttttttaaaacaatacaaagtgaagaaaa 18452690  T
Q  149 ttcatttcaagtt 161  Q
    |||||||||||||    
T  18452689 ttcatttcaagtt 18452677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 28 - 189
Target Start/End: Original strand, 16634163 - 16634324
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||| ||| || |||||| | |||||||||| ||||||||||| ||||||| |||  |||||||| ||||||| ||||| |||||||||||||||||||    
T  16634163 ttttgcagtgagaaatcatataaatcgacaaatcaagacatcacgtgaaggaacaataatatgaagtttgaagaccaatggttcttagaaggtttttgaa 16634262  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgat 189  Q
    || |||||||  |||| ||||||||||||||||| | |  ||||||||| ||||||||||||    
T  16634263 gaaaatacaagatgaaaaaaattcatttcaagtttccaatagttttcaggcggaagaacgat 16634324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 28 - 195
Target Start/End: Original strand, 24517462 - 24517629
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||||| |||| |||||||| |||||  ||| ||| ||||||| ||||||||||||||||  ||||||| ||| ||||| || | | ||||||||| ||    
T  24517462 ttttgtaataagaaatcatgtaaatcggtaaatcaatacatcacgtgaaggatcaaggatacaaagattgcagaccaatggttatcataaggttttttaa 24517561  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaa 195  Q
    || |||| |||| |||||||||||||||||||||||||||||||| |||| | || ||||||||||||    
T  24517562 gataatagaaagcgaagaaaattcatttcaagttcctaggagtttccagatgaaataacgatcgaaaa 24517629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 41 - 195
Target Start/End: Original strand, 26070603 - 26070757
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 140  Q
    |||||||| ||| | |||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||| || |||||||||||||||||| |||  |    
T  26070603 aatcatgtaaattggcaaaacaagacatcacatgaaggatcaaggatatgaagattgaagatctatggttcgtataaggtttttgaagacaatgcaagtt 26070702  T
Q  141 gaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaa 195  Q
      |||||||||| |||||||||| |||  |||  ||||||||||| | |||||||    
T  26070703 agagaaaattcagttcaagttccaaggcatttcaagacggaagaaggctcgaaaa 26070757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 28 - 197
Target Start/End: Complemental strand, 12340012 - 12339844
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaag-attgaagatcaatgattcttagaaggtttttga 126  Q
    ||||||||||||||||||| | |||| ||||| ||||||||||| |||||||||||||  |||||| |||||| ||||| | ||||||||||||  ||||    
T  12340012 ttttgtagtaaggaatcatataaatcaacaaatcaagacatcacgtgaaggatcaagg--atgaagaattgaaaatcaagggttcttagaaggtcgttga 12339915  T
Q  127 agacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 197  Q
    ||||||||||||||||  || |||| ||||| |||  ||||  |||||||||  |||||| ||||||||||    
T  12339914 agacaatacaaagtgagaaacattcgtttcatgtttataggcattttcagacaaaagaacaatcgaaaacg 12339844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 89 - 163
Target Start/End: Complemental strand, 19763823 - 19763749
Alignment:
Q  89 tgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcc 163  Q
    ||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19763823 tgaagattgaagatcaagggttcttagaaggtttttgaagataatacaaagtgaagaaaattcatttcaagttcc 19763749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 65 - 161
Target Start/End: Complemental strand, 7742831 - 7742735
Alignment:
Q  65 acatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagtt 161  Q
    ||||||| ||||| ||| | |||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||| || |||||||||    
T  7742831 acatcacgtgaagaatcgaagatatgaagactgaagatcaatggttcttagaaggtctttgaagacaatacaaagtgaagaaaaatcgtttcaagtt 7742735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 28 - 175
Target Start/End: Complemental strand, 17382042 - 17381892
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||||||| || |||||||| ||||| |||| |||||||| |  ||||||||||||||||||||| ||||||| ||||| ||||||||  ||||||  |    
T  17382042 ttttgtagtgagaaatcatgtaaatcgtcaaatcaagacataatgtgaaggatcaaggatatgaagtttgaagaccaatggttcttagattgtttttcga 17381943  T
Q  128 gac---aatacaaagtgaagaaaattcatttcaagttcctaggagttttca 175  Q
    |||   |||||||  |||||||| |||||||||||||||||| ||||||||    
T  17381942 gacattaatacaagatgaagaaagttcatttcaagttcctagaagttttca 17381892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 163
Target Start/End: Original strand, 18178251 - 18178353
Alignment:
Q  61 caagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagt 160  Q
    ||||||| | ||||||||||| ||||||||||||||||||| ||||  ||||| |||||| |||||||| |||||||| |||| ||||||||| ||||||    
T  18178251 caagacaccgcatgaaggatcgaggatatgaagattgaagaccaattgttcttggaaggtctttgaagataatacaaattgaataaaattcatctcaagt 18178350  T
Q  161 tcc 163  Q
    |||    
T  18178351 tcc 18178353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 20694761 - 20694863
Alignment:
Q  33 tagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaa 132  Q
    ||||||| |||||||| ||||| |||| |||||||||| ||||||||| | ||| || |||||||||||| |||| |||||||||||| |||||||||||    
T  20694761 tagtaagaaatcatgtaaatcggcaaaacaagacatcatatgaaggataacggacattaagattgaagataaatggttcttagaaggtatttgaagacaa 20694860  T
Q  133 tac 135  Q
    |||    
T  20694861 tac 20694863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 73 - 163
Target Start/End: Complemental strand, 23157757 - 23157667
Alignment:
Q  73 tgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcc 163  Q
    |||||||| |||||||| |||||||||| |||||| |||||| ||||| ||| ||||||| | |||||||||||| ||||||| |||||||    
T  23157757 tgaaggataaaggatattaagattgaagttcaatggttcttataaggtatttaaagacaacagaaagtgaagaaagttcatttaaagttcc 23157667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 61 - 163
Target Start/End: Original strand, 24130775 - 24130879
Alignment:
Q  61 caagacatcacatgaaggatca--aggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaa 158  Q
    |||||||||||||||||||| |  |||||||||||| | || |||||||  |||||||||||||||||| |||||||||| ||  ||||||||||  |||    
T  24130775 caagacatcacatgaaggattataaggatatgaagaataaatatcaatggatcttagaaggtttttgaatacaatacaaattggggaaaattcatcccaa 24130874  T
Q  159 gttcc 163  Q
    |||||    
T  24130875 gttcc 24130879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 161
Target Start/End: Original strand, 19331671 - 19331759
Alignment:
Q  73 tgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagtt 161  Q
    ||||||||| |||||||||||||||||  ||||||||| |||||||   |||||||||||||||| ||||||| || |||||| |||||    
T  19331671 tgaaggatcgaggatatgaagattgaaattcaatgatttttagaagacatttgaagacaatacaatgtgaagataagtcatttgaagtt 19331759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 44 - 162
Target Start/End: Complemental strand, 11997876 - 11997757
Alignment:
Q  44 catgttaatcgacaaaccaagacatcacatgaaggatcaag-gatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtga 142  Q
    ||||| ||||| || | |||||||||  || |||||||||| |||||||||| ||||||||||||||| ||||||||||||| |||| |||||||  ||     
T  11997876 catgtaaatcggcagagcaagacatcttattaaggatcaagagatatgaagaatgaagatcaatgatttttagaaggtttttaaagataatacaagttgg 11997777  T
Q  143 agaaaattcatttcaagttc 162  Q
    | |||||||||  |||||||    
T  11997776 aaaaaattcatcccaagttc 11997757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 28 - 163
Target Start/End: Complemental strand, 18873049 - 18872915
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    |||||||||  | ||| |||| || ||| ||| ||||||||||  | ||||||  ||||||||||||| |||| ||||||| | ||||| |||  |||||    
T  18873049 ttttgtagtgtgaaattatgtaaaacgataaatcaagacatcatgtaaaggatggaggatatgaagatggaagttcaatgagt-ttagacggtagttgaa 18872951  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcc 163  Q
    ||||||||||| |||||||||||||||| |||||||    
T  18872950 gacaatacaaattgaagaaaattcatttgaagttcc 18872915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 126
Target Start/End: Complemental strand, 24410915 - 24410830
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttga 126  Q
    |||||||| ||| | ||||  |||||||||||||||||||| ||||| |||||||| |||||||||| |||||| ||||| |||||    
T  24410915 aatcatgtcaattggcaaaataagacatcacatgaaggatcgaggatctgaagattcaagatcaatggttcttataaggtatttga 24410830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 195
Target Start/End: Complemental strand, 17695410 - 17695294
Alignment:
Q  79 atcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagac 178  Q
    ||||||| |||||| | |||||||||||| || ||||||||||||||||||||||||||  ||  ||||||||||   ||||||| |||  |||  ||||    
T  17695410 atcaaggttatgaataatgaagatcaatggttattagaaggtttttgaagacaatacaagttggggaaaattcatcctaagttccaaggcatttcaagac 17695311  T
Q  179 ggaagaacgatcgaaaa 195  Q
     |||||||| |||||||    
T  17695310 cgaagaacgctcgaaaa 17695294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 158
Target Start/End: Complemental strand, 22643880 - 22643773
Alignment:
Q  51 atcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaatt 150  Q
    |||| |||| ||||||| ||  || |||||| ||| ||| |||||| || |||| || |||||| ||||| |||||| |||||||||| |||||||||||    
T  22643880 atcggcaaaacaagacaccaagtggaggatcgagggtataaagattaaatatcagtggttcttaaaaggtatttgaatacaatacaaactgaagaaaatt 22643781  T
Q  151 catttcaa 158  Q
    ||||||||    
T  22643780 catttcaa 22643773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 28 - 138
Target Start/End: Complemental strand, 25075310 - 25075201
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaag-attgaagatcaatgattcttagaaggtttttga 126  Q
    |||||||||||| |||||||| ||||  |||| ||||||||||  |||||||||||||  |||||| |||||||||||| | |||||| || ||| || |    
T  25075310 ttttgtagtaagaaatcatgtaaatcatcaaatcaagacatcatgtgaaggatcaagg--atgaagaattgaagatcaagggttcttaaaatgttgttaa 25075213  T
Q  127 agacaatacaaa 138  Q
    |||||| |||||    
T  25075212 agacaacacaaa 25075201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 28 - 138
Target Start/End: Complemental strand, 25133279 - 25133170
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaag-attgaagatcaatgattcttagaaggtttttga 126  Q
    |||||||||||| |||||||| ||||  |||| ||||||||||  |||||||||||||  |||||| |||||||||||| | |||||| || ||| || |    
T  25133279 ttttgtagtaagaaatcatgtaaatcatcaaatcaagacatcatgtgaaggatcaagg--atgaagaattgaagatcaagggttcttaaaatgttgttaa 25133182  T
Q  127 agacaatacaaa 138  Q
    |||||| |||||    
T  25133181 agacaacacaaa 25133170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 155
Target Start/End: Original strand, 25367723 - 25367836
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 140  Q
    |||||||| |||||  |||  ||| |||||||||||  ||| | |||| ||||||| ||| |||||| ||||||||||   |||||||| |||| |||||    
T  25367723 aatcatgtaaatcggaaaagaaaggcatcacatgaaatatcgatgatacgaagattaaagttcaatggttcttagaagacatttgaaga-aatagaaagt 25367821  T
Q  141 gaagaaaattcattt 155  Q
    |||||||||||||||    
T  25367822 gaagaaaattcattt 25367836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 153
Target Start/End: Complemental strand, 4325328 - 4325229
Alignment:
Q  55 acaaaccaagacatcacatgaaggatcaagg-atatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcat 153  Q
    ||||| ||| ||| |||||||||||| | || ||||||| | | || ||||||||| |||| ||||||||| ||||||||||||  || |||||||||||    
T  4325328 acaaaacaatacaccacatgaaggattaggggatatgaacaatcaaaatcaatgatacttataaggttttttaagacaatacaagttggagaaaattcat 4325229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 153
Target Start/End: Complemental strand, 18435412 - 18435299
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaa-ggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaag 139  Q
    |||||||| | | |||||| |||||||| |||||||| || || ||||||||| | ||| |||| ||| ||   | ||||||||||||||||||||||      
T  18435412 aatcatgtaatttgacaaagcaagacatgacatgaagaataaaaggatatgaaaaatgacgatcgatggtttacataaggtttttgaagacaatacaagt 18435313  T
Q  140 tgaagaaaattcat 153  Q
    |||| |||||||||    
T  18435312 tgaaaaaaattcat 18435299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 114; Significance: 8e-58; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 28 - 197
Target Start/End: Complemental strand, 16052275 - 16052106
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||||||| || |||||| | |||| ||||| |||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||    
T  16052275 ttttgtagtgagaaatcatctaaatcaacaaatcaagacatcacatgaaggataaaggatatgaagattaaagaccaatgattcttagaaggtttttgaa 16052176  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 197  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||  |||||||||||| ||||||||||    
T  16052175 gacaatacaaaatgaagaaaattcatttcaagttccttggagtttctagacggaagaacaatcgaaaacg 16052106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 56 - 197
Target Start/End: Complemental strand, 11310225 - 11310086
Alignment:
Q  56 caaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcattt 155  Q
    |||| ||||||||||  |||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  11310225 caaatcaagacatcatgtgaaggatcaaggatatgaagatttaag-tcaatgattcttagaaggtttttgaaaacaatacaaagtgaagaaaatt-attt 11310128  T
Q  156 caagttcctaggagttttcagacggaagaacgatcgaaaacg 197  Q
    |||||||||||||||||  |||||||||||||||||||||||    
T  11310127 caagttcctaggagtttctagacggaagaacgatcgaaaacg 11310086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 28 - 197
Target Start/End: Original strand, 24696698 - 24696868
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    |||| ||||||| |||||||| |||| ||||| ||||||||||||| ||||||||||||||||||||||||||| || |  |||||||||||||||||||    
T  24696698 ttttatagtaagaaatcatgtaaatcaacaaatcaagacatcacataaaggatcaaggatatgaagattgaagaccacttgttcttagaaggtttttgaa 24696797  T
Q  128 gacaatacaaagt-gaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 197  Q
    || ||||||||||  || ||||||||||||||||| |||||| |||  |||||||| ||||||||||||||    
T  24696798 gaaaatacaaagtaaaaaaaaattcatttcaagtttctaggattttctagacggaaaaacgatcgaaaacg 24696868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 32 - 197
Target Start/End: Original strand, 28902210 - 28902374
Alignment:
Q  32 gtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagaca 131  Q
    ||||| || |||||||| |||| ||||| | ||||||||| ||||||||||| ||||| || ||| |||| ||||| ||||||||||||| |||||||||    
T  28902210 gtagtgagaaatcatgtaaatcaacaaatcgagacatcacgtgaaggatcaatgatattaa-attaaagaccaatggttcttagaaggttattgaagaca 28902308  T
Q  132 atacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 197  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||| |||||||    
T  28902309 atacaaagtgaataaaattcattttaagttcctaggagttttcagacgaaagaacgattgaaaacg 28902374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 28 - 197
Target Start/End: Original strand, 16054411 - 16054579
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggat-atgaagattgaagatcaatgattcttagaaggtttttga 126  Q
    ||||||||| ||||||||||| ||||   ||  ||||||||||  ||||||||||||| | |||||  ||||||||||| | ||||||||||||| ||||    
T  16054411 ttttgtagtgaggaatcatgtaaatcattaattcaagacatcatgtgaaggatcaaggttgatgaa--ttgaagatcaagggttcttagaaggttgttga 16054508  T
Q  127 agacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 197  Q
    ||| |||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||    
T  16054509 agaaaatacaaagtgaagaaaattcatttcaagttcctaggagtttccagacaaaagaacgatcgaaaacg 16054579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 51 - 186
Target Start/End: Complemental strand, 28901324 - 28901190
Alignment:
Q  51 atcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaatt 150  Q
    ||||||||| |||||||||| |||||| ||||| |||||||||||||||  |||||| |||||| ||||||| |||||||||||||||||||||||||||    
T  28901324 atcgacaaatcaagacatcatatgaagaatcaatgatatgaagattgaat-tcaatggttcttataaggtttctgaagacaatacaaagtgaagaaaatt 28901226  T
Q  151 catttcaagttcctaggagttttcagacggaagaac 186  Q
    ||||||||| ||||||||||||  ||||||||||||    
T  28901225 catttcaagctcctaggagtttctagacggaagaac 28901190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 28 - 146
Target Start/End: Complemental strand, 28859237 - 28859119
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    |||||||||||| |||||||| ||| |||||||| | ||||||||||||||||||||||||| |||||| |||||||||| |||||||| ||||||||||    
T  28859237 ttttgtagtaagaaatcatgtaaatggacaaacctaaacatcacatgaaggatcaaggatatcaagattaaagatcaatggttcttagatggtttttgaa 28859138  T
Q  128 gacaatacaaagtgaagaa 146  Q
    ||||||| |||||||||||    
T  28859137 gacaataaaaagtgaagaa 28859119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 38 - 189
Target Start/End: Original strand, 24120350 - 24120501
Alignment:
Q  38 aggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaa 137  Q
    ||||||||||  ||||||| || ||||||||||  ||||||||||||||||| ||  ||||| | ||||| ||||||||||||||| ||||| |||| ||    
T  24120350 aggaatcatgcaaatcgaccaatcaagacatcatgtgaaggatcaaggatattaattttgaataccaatgtttcttagaaggttttcgaagataataaaa 24120449  T
Q  138 agtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgat 189  Q
      ||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  24120450 gatgaagaaaattcatttcaagttcctaggaatttccagacggaagaacgat 24120501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 40 - 163
Target Start/End: Complemental strand, 28292087 - 28291964
Alignment:
Q  40 gaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaag 139  Q
    ||||||||| ||||| ||||  |||||||||||||||||||  |||||||||||||||||||| |||| |||||||||||| |||||||||||||||||     
T  28292087 gaatcatgtaaatcgccaaaataagacatcacatgaaggattgaggatatgaagattgaagattaatggttcttagaaggtctttgaagacaatacaaaa 28291988  T
Q  140 tgaagaaaattcatttcaagttcc 163  Q
    ||||||||||  ||||||||||||    
T  28291987 tgaagaaaataaatttcaagttcc 28291964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 43 - 186
Target Start/End: Complemental strand, 14977092 - 14976952
Alignment:
Q  43 tcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtga 142  Q
    |||||| ||| |||||| |||||||||||||||| ||||||||| |||||||||||| |||||||||| ||   ||||||||||||| ||||||||||||    
T  14977092 tcatgtaaattgacaaatcaagacatcacatgaaagatcaaggacatgaagattgaaaatcaatgattttt---aggtttttgaagataatacaaagtga 14976996  T
Q  143 agaaaattcatttcaagttcctaggagttttcagacggaagaac 186  Q
     ||||||| |||||||| | |||| ||||| |||||||||||||    
T  14976995 tgaaaattaatttcaagcttctagaagtttccagacggaagaac 14976952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 28 - 161
Target Start/End: Original strand, 32239404 - 32239537
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||||||| || |||| ||| ||| |||||| | |||||||||||||||||| ||||||||||||||||||| |||||| || ||| |||||| || ||    
T  32239404 ttttgtagtgagaaatcgtgtaaattgacaaatcgagacatcacatgaaggataaaggatatgaagattgaagttcaatggtttttataaggttcttaaa 32239503  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagtt 161  Q
    ||||||| ||||||||||||||||||||||||||    
T  32239504 gacaataaaaagtgaagaaaattcatttcaagtt 32239537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 28 - 163
Target Start/End: Original strand, 12956597 - 12956733
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||||||| | ||||||| | |||||| ||||||||| ||||||||||| |||||||||||||||| |||||||||||  || || |||||||||| ||    
T  12956597 ttttgtagtgaagaatcatataaatcgataaaccaagatatcacatgaagaatcaaggatatgaagactgaagatcaattgtttttggaaggttttttaa 12956696  T
Q  128 gacaatacaaagtgaaga-aaattcatttcaagttcc 163  Q
    || ||||||||||||||| ||||||||||||||||||    
T  12956697 gataatacaaagtgaagagaaattcatttcaagttcc 12956733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 33 - 163
Target Start/End: Original strand, 5153879 - 5154009
Alignment:
Q  33 tagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaa 132  Q
    ||||||| |||||||| ||| | |||| |||||||| |  ||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||    
T  5153879 tagtaagaaatcatgtaaataggcaaaacaagacataaagtgaaggatcgaggatatgaagattgaagatcaatgattattggaaggtttttgaagacaa 5153978  T
Q  133 tacaaagtgaagaaaattcatttcaagttcc 163  Q
    || ||  |||| |||||||||||||||||||    
T  5153979 tataacatgaataaaattcatttcaagttcc 5154009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 33 - 163
Target Start/End: Original strand, 29291891 - 29292021
Alignment:
Q  33 tagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaa 132  Q
    ||||||| |||||||| ||||| |||| ||||| ||||| ||||| ||| |||||||||| |||||||||||||| |||||||||||| |||||||||||    
T  29291891 tagtaagaaatcatgtaaatcggcaaaacaagatatcacgtgaagaatcgaggatatgaatattgaagatcaatggttcttagaaggtctttgaagacaa 29291990  T
Q  133 tacaaagtgaagaaaattcatttcaagttcc 163  Q
     | |||||||| |||||||||||||| ||||    
T  29291991 cagaaagtgaaaaaaattcatttcaaattcc 29292021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 41 - 189
Target Start/End: Complemental strand, 22894515 - 22894370
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 140  Q
    |||||||| |||||| ||| ||||| ||||||||||||||||| ||||| |||||||||  |||||  |||||||| |||||||||||||||||||||||    
T  22894515 aatcatgtaaatcga-aaatcaagatatcacatgaaggatcaatgatataaagattgaat-tcaattgttcttagatggtttttgaagacaatacaaagt 22894418  T
Q  141 gaagaaaattcatttcaagttcctaggagttttcagacggaagaacgat 189  Q
    ||||||||||| ||| ||||||| ||||| || ||||| ||||||||||    
T  22894417 gaagaaaattcttttgaagttccaaggag-ttccagacagaagaacgat 22894370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 41 - 148
Target Start/End: Complemental strand, 13583505 - 13583398
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 140  Q
    |||||||| |||||||||| ||||||||||  ||||||||| ||||||||| |||||||| |||||| |||||||||| | |||||||||||||||||||    
T  13583505 aatcatgtaaatcgacaaaacaagacatcaagtgaaggatcgaggatatgatgattgaagttcaatggttcttagaagatatttgaagacaatacaaagt 13583406  T
Q  141 gaagaaaa 148  Q
    ||| ||||    
T  13583405 gaaaaaaa 13583398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 56 - 163
Target Start/End: Complemental strand, 30851070 - 30850963
Alignment:
Q  56 caaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcattt 155  Q
    |||| |||||||||   ||||||||||||||||||||||||||||||||| | ||||||||| || |||||| | |||||||||||||||||||| ||||    
T  30851070 caaagcaagacatctagtgaaggatcaaggatatgaagattgaagatcaacggttcttagaatgtctttgaatataatacaaagtgaagaaaattaattt 30850971  T
Q  156 caagttcc 163  Q
    ||||||||    
T  30850970 caagttcc 30850963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 5570083 - 5569981
Alignment:
Q  83 aggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaa 182  Q
    ||||||||||| || |||| ||||| |||||||||| ||||| ||||||||||||  ||||||||||||||||||| ||| |||||||||||||||||||    
T  5570083 aggatatgaagtttaaagaccaatggttcttagaagctttttaaagacaatacaagatgaagaaaattcatttcaacttcataggagttttcagacggaa 5569984  T
Q  183 gaa 185  Q
    |||    
T  5569983 gaa 5569981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 41 - 163
Target Start/End: Original strand, 11437548 - 11437671
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaa-ggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaag 139  Q
    |||||||| ||||| |||| ||||||||||  |||| |||||||||||||||| ||||||| |||||| ||||||||||   ||||||||||||||| ||    
T  11437548 aatcatgtaaatcggcaaaacaagacatcaagtgaaaggatcaaggatatgaaaattgaagttcaatggttcttagaagacatttgaagacaatacagag 11437647  T
Q  140 tgaagaaaattcatttcaagttcc 163  Q
    |||||| ||||||||| |||||||    
T  11437648 tgaagataattcatttgaagttcc 11437671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 94 - 197
Target Start/End: Complemental strand, 13081867 - 13081764
Alignment:
Q  94 attgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaa 193  Q
    |||||||||||| | ||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||| ||||||  ||||  |||||||||| ||    
T  13081867 attgaagatcaagggttcttagaaggttgttgaagacaatacaaaatgaagaaaattcatttcaagtttctatgagtttctagacaaaagaacgatcaaa 13081768  T
Q  194 aacg 197  Q
    ||||    
T  13081767 aacg 13081764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 41 - 163
Target Start/End: Original strand, 30543890 - 30544013
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattc-ttagaaggtttttgaagacaatacaaag 139  Q
    |||||||| |||||  ||| ||||| ||||||||||||||  |||||||||||||||||| |||||| ||| ||| ||| | ||| ||||||||| ||||    
T  30543890 aatcatgtaaatcggtaaaacaagatatcacatgaaggattgaggatatgaagattgaagttcaatggttctttaaaagatatttaaagacaatataaag 30543989  T
Q  140 tgaagaaaattcatttcaagttcc 163  Q
    ||||||||||||||||||||||||    
T  30543990 tgaagaaaattcatttcaagttcc 30544013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 28 - 155
Target Start/End: Complemental strand, 14424811 - 14424684
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    |||| |||| || |||||||| ||||| |||| ||||||| ||   |||||||  | |||| |||||||||||||||||| |||||||||||||||||||    
T  14424811 ttttttagtgagaaatcatgtaaatcggcaaaacaagacaacaagggaaggatatatgataagaagattgaagatcaatggttcttagaaggtttttgaa 14424712  T
Q  128 gacaatacaaagtgaagaaaattcattt 155  Q
     ||||| ||| |||||||||||||||||    
T  14424711 cacaattcaatgtgaagaaaattcattt 14424684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 41 - 160
Target Start/End: Complemental strand, 6888178 - 6888059
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 140  Q
    |||||||| |||| ||||| |||  |||||| || || ||| ||||||||||||||||||||||||| |||||| || || ||||||||||||||||  |    
T  6888178 aatcatgtaaatcaacaaaacaaaccatcacgtgcagtatcgaggatatgaagattgaagatcaatggttcttaaaatgtctttgaagacaatacaagtt 6888079  T
Q  141 gaagaaaattcatttcaagt 160  Q
    ||||||||| | ||||||||    
T  6888078 gaagaaaatccgtttcaagt 6888059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 28 - 163
Target Start/End: Complemental strand, 27097798 - 27097665
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    |||| |||| || |||||||| ||||| |||| ||||||||||| ||| ||||  |  ||||||||||||||  | |||  |||||||||||| ||||||    
T  27097798 ttttttagtgagaaatcatgtaaatcggcaaaacaagacatcacgtgatggattgatcatatgaagattgaa--tgaatagttcttagaaggtctttgaa 27097701  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcc 163  Q
    ||||||||||  ||||||||||||| ||||||||||    
T  27097700 gacaatacaagttgaagaaaattcaattcaagttcc 27097665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 172
Target Start/End: Complemental strand, 23408181 - 23408111
Alignment:
Q  102 tcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagttt 172  Q
    ||||||||||||||||| ||||||||||| || |||| || |||||||||||||||| || ||||||||||    
T  23408181 tcaatgattcttagaagatttttgaagactatgcaaaatgcagaaaattcatttcaattttctaggagttt 23408111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 163
Target Start/End: Original strand, 31436644 - 31436720
Alignment:
Q  83 aggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcc 163  Q
    |||||||||||||||| |||||||| |||||||   || |||||||||||||||||||||| |||||| ||||||||||||    
T  31436644 aggatatgaagattgacgatcaatggttcttag---gtatttgaagacaatacaaagtgaaaaaaatt-atttcaagttcc 31436720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 162
Target Start/End: Original strand, 28074657 - 28074763
Alignment:
Q  56 caaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcattt 155  Q
    |||| |||||||||| ||||||||||||||||||||||| ||||||||| || | ||||  |||||||  |||| |||||||  ||  |||||||||| |    
T  28074657 caaaacaagacatcaaatgaaggatcaaggatatgaagaatgaagatcagtggtccttacgaggttttgaaagataatacaagttggggaaaattcatct 28074756  T
Q  156 caagttc 162  Q
    || ||||    
T  28074757 catgttc 28074763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 137
Target Start/End: Complemental strand, 13530091 - 13529994
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaagg-atatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaa 137  Q
    |||||||| |||||  ||| ||||||| || || ||||||||||| ||||||||| |||| |||||||||||||| ||| ||||| ||| ||||||||    
T  13530091 aatcatgtaaatcggtaaagcaagacaccatataaaggatcaagggatatgaagaatgaaaatcaatgattcttataagctttttaaaggcaatacaa 13529994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 137
Target Start/End: Complemental strand, 13619630 - 13619533
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaagg-atatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaa 137  Q
    |||||||| |||||  ||| ||||||| || || ||||||||||| ||||||||| |||| |||||||||||||| ||| ||||| ||| ||||||||    
T  13619630 aatcatgtaaatcggtaaagcaagacaccatataaaggatcaagggatatgaagaatgaaaatcaatgattcttataagctttttaaaggcaatacaa 13619533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 197
Target Start/End: Complemental strand, 29047267 - 29047170
Alignment:
Q  100 gatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 197  Q
    |||||| |||||||| |||||||||||||||||| |||| |||||||||  || |  ||||||||| |||||| ||  |  |||||||||||||||||    
T  29047267 gatcaaggattcttataaggtttttgaagacaatgcaaaatgaagaaaaaccaatctaagttcctatgagtttccaagcaaaagaacgatcgaaaacg 29047170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 137
Target Start/End: Complemental strand, 35135406 - 35135310
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaa 137  Q
    ||||| || |||||||||| ||||||||||| || |||||  ||| |||| ||| |||| ||||||| || |||| ||||||||||||||| |||||    
T  35135406 aatcaggtaaatcgacaaaacaagacatcacgtggaggattgagggtatggagaatgaaaatcaatggttattaggaggtttttgaagacagtacaa 35135310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 293
Target Start/End: Complemental strand, 28859123 - 28859030
Alignment:
Q  199 aagaattcgcacgtgaggggttgcctgatgcgccactgcgcatgggacagtgtttgccattgcctcatgcgcatcctgcacgtcagggatgcgca 293  Q
    ||||||||||||  |||||| | ||| ||| ||||||| |||||||| ||| |||| || |||||||||| ||||||||||  ||||||||||||    
T  28859123 aagaattcgcacacgaggggctacctcatgtgccactgtgcatgggaaagtatttgtcactgcctcatgcccatcctgcac-ccagggatgcgca 28859030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 137
Target Start/End: Complemental strand, 28260275 - 28260178
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaag-attgaagatcaatgattcttagaaggtttttgaagacaatacaa 137  Q
    |||||||| ||||  |||| ||||||||||| || ||||||||| |||| ||  |||||||||||||  |||||| || ||||||||||| |||||||    
T  28260275 aatcatgtaaatcagcaaaacaagacatcacgtggaggatcaagtatatcaaatattgaagatcaatagttcttataaagtttttgaagataatacaa 28260178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 12956772 - 12956824
Alignment:
Q  192 aaaacgcaagaattcgcacgtgaggggttgcctgatgcgccactgcgcatggg 244  Q
    |||||||||||||| |||| ||| ||||||||| |||||| ||||||||||||    
T  12956772 aaaacgcaagaatttgcacttgaagggttgcctcatgcgctactgcgcatggg 12956824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 24584722 - 24584650
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaaga 101  Q
    ||||||||| || |||| ||| ||| ||||| | ||||||||||||||| ||||| ||||||||| ||||||||    
T  24584722 ttttgtagtgagaaatcttgtaaattgacaatc-aagacatcacatgaaagatcatggatatgaaaattgaaga 24584650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 114; Significance: 8e-58; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 28 - 197
Target Start/End: Complemental strand, 27417261 - 27417092
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||||||| || |||||||| |||||||||| ||||||||||||||||||||||| ||||||||  ||||||| ||||| |||| ||||||||||||||    
T  27417261 ttttgtagtgagaaatcatgtaaatcgacaaatcaagacatcacatgaaggatcaatgatatgaatgttgaagaccaatggttctaagaaggtttttgaa 27417162  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 197  Q
     ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||    
T  27417161 aacaatacaaagtgaagaaaattcatttcaagttccaaggagtttccagacggaagaacgattgaaaacg 27417092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 28 - 190
Target Start/End: Original strand, 30998888 - 30999049
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||||||| | || | |||| |||||||||| ||||| ||||  |||||||||||||||||| | |||||||||||| | ||||||||||||| |||||    
T  30998888 ttttgtagtgaagagtgatgtaaatcgacaaatcaagatatcaagtgaaggatcaaggatatgta-attgaagatcaagggttcttagaaggttgttgaa 30998986  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatc 190  Q
    |||||||||||||| |||||||||||||||||||| || ||||||||| ||||||||||||||    
T  30998987 gacaatacaaagtggagaaaattcatttcaagttcatatgagttttcaaacggaagaacgatc 30999049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 28 - 165
Target Start/End: Complemental strand, 21505137 - 21505000
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||||||| ||||||||||| |||||| |||  ||||||||||||||| |||||||||| ||||| ||||||| ||||| |||| ||||||||||||||    
T  21505137 ttttgtagtgaggaatcatgtaaatcgataaattaagacatcacatgaaagatcaaggatgtgaagtttgaagaccaatggttctgagaaggtttttgaa 21505038  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttccta 165  Q
    ||||||||||  ||||||||||||||||||| ||||||    
T  21505037 gacaatacaagttgaagaaaattcatttcaaattccta 21505000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 35 - 163
Target Start/End: Original strand, 1732674 - 1732802
Alignment:
Q  35 gtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaata 134  Q
    ||||| |||||||| ||| |||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||  | ||||||| |||||    
T  1732674 gtaagaaatcatgtaaattgacaaaacaagacatcacatgaaggattaagaatatgaagattgaagatcaatgattcttagaatatatttgaaggcaata 1732773  T
Q  135 caaagtgaagaaaattcatttcaagttcc 163  Q
    |||| |||| |||||| ||||||||||||    
T  1732774 caaaatgaataaaatttatttcaagttcc 1732802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 28 - 196
Target Start/End: Original strand, 1733208 - 1733375
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagat-tgaagatcaatgattcttagaaggtttttga 126  Q
    ||||||||| ||||||||||| ||||  |||| ||||||||||| |||||||| ||||||  |||||  ||||||||||   ||||||||| ||| ||||    
T  1733208 ttttgtagtgaggaatcatgtaaatcatcaaagcaagacatcacgtgaaggattaaggat--gaagaaatgaagatcaagagttcttagaatgttgttga 1733305  T
Q  127 agacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaac 196  Q
    ||| ||||||||||||| ||||||||||| |  ||||||||||||||||||||||||||| |||||||||    
T  1733306 agataatacaaagtgaataaaattcattttagattcctaggagttttcagacggaagaacaatcgaaaac 1733375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 16593748 - 16593605
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagat-tgaagatcaatgattcttagaaggtttttga 126  Q
    ||||||||| | ||||||||| ||||  |||| ||||||||||  ||||||||||| |||  |||||  |||||||||| | ||||||||||||| ||||    
T  16593748 ttttgtagtgaagaatcatgtaaatcatcaaatcaagacatcatttgaaggatcaacgat--gaagaaatgaagatcaagggttcttagaaggttgttga 16593651  T
Q  127 agacaatacaaagtgaagaaaattcatttcaagttcctaggagttt 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  16593650 agacaatacaaagtgaagaaaattcatttcaagttcctaggagttt 16593605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 41 - 195
Target Start/End: Complemental strand, 18236288 - 18236134
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 140  Q
    |||||||| | ||| |||| ||||||||||||||||||||||   |||||||||||||||  ||||| ||||||||||||| |||||||||||||||  |    
T  18236288 aatcatgtaactcggcaaaacaagacatcacatgaaggatcacaaatatgaagattgaaggccaatggttcttagaaggttgttgaagacaatacaagat 18236189  T
Q  141 gaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaa 195  Q
    ||||||||||||||||||||||  |||  |||  ||||||||||| |||||||||    
T  18236188 gaagaaaattcatttcaagttcaaaggcatttaaagacggaagaatgatcgaaaa 18236134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 28 - 196
Target Start/End: Original strand, 35707920 - 35708087
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaaga-ttgaagatcaatgattcttagaaggtttttga 126  Q
    ||||||||| ||||||||||| ||||   ||| ||||||||||  ||||| |||||||||  ||||| ||||| ||||| | ||||||||||||| ||||    
T  35707920 ttttgtagtgaggaatcatgtaaatcataaaatcaagacatcatgtgaagtatcaaggat--gaagaattgaatatcaaggtttcttagaaggttgttga 35708017  T
Q  127 agacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaac 196  Q
    |||||||||||| |||| |||||| |||||||||||  ||||||||||||||| ||||||||||||||||    
T  35708018 agacaatacaaaatgaacaaaatttatttcaagttctcaggagttttcagacgaaagaacgatcgaaaac 35708087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 24188085 - 24188217
Alignment:
Q  27 attttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttga 126  Q
    |||||||||| || |||||||| ||||||| || |||| ||||||||||||||||||| |||||||||||||||| ||||   |||||||| ||||||||    
T  24188085 attttgtagtgagaaatcatgtaaatcgaccaatcaaggcatcacatgaaggatcaagaatatgaagattgaaga-caatagatcttagaaagtttttga 24188183  T
Q  127 agacaatacaaagtgaagaaaattcatttcaagt 160  Q
    |||||||||||||||||||| ||||||| |||||    
T  24188184 agacaatacaaagtgaagaagattcattccaagt 24188217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 28 - 195
Target Start/End: Original strand, 25474154 - 25474320
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||||||| ||||||||||| ||||  |||| ||||||||||  ||||| ||||||||| |  | ||||||| |||| | ||||||||||||| |||||    
T  25474154 ttttgtagtgaggaatcatgtaaatcatcaaatcaagacatcatgtgaagaatcaaggatgtaga-attgaaggtcaagggttcttagaaggttgttgaa 25474252  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaa 195  Q
    ||||||| |||||||||||||||||||||| |||||||| ||||| |||| | ||||||||| |||||    
T  25474253 gacaatataaagtgaagaaaattcatttcaggttcctagtagtttccagatgaaagaacgattgaaaa 25474320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 17415148 - 17415028
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 140  Q
    |||| ||| ||||| |||| ||||||||||| ||||||||| |||| |||||||||||| ||||||| ||||||| || | ||||||||||| | |||||    
T  17415148 aatcgtgtaaatcggcaaaacaagacatcacgtgaaggatcgaggacatgaagattgaa-atcaatggttcttaggagttatttgaagacaacaaaaagt 17415050  T
Q  141 gaagaaaattcatttcaagttc 162  Q
    ||||||||||||||||||||||    
T  17415049 gaagaaaattcatttcaagttc 17415028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 41 - 163
Target Start/End: Original strand, 18818826 - 18818953
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggata-----tgaagattgaagatcaatgattcttagaaggtttttgaagacaatac 135  Q
    |||||||| ||||| |||| |||| |||||| |||||||| |||||||     |||| | ||||||| |||| |||||||||||| ||||||||||||||    
T  18818826 aatcatgtaaatcggcaaaacaaggcatcacgtgaaggattaaggataggatatgaaaactgaagattaatggttcttagaaggtctttgaagacaatac 18818925  T
Q  136 aaagtgaagaaaattcatttcaagttcc 163  Q
    ||||||||||||||||| ||||||||||    
T  18818926 aaagtgaagaaaattcaattcaagttcc 18818953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 28 - 150
Target Start/End: Original strand, 22511062 - 22511184
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||||||| || |||||||| |||||| ||| ||||||||||  |||| |||  |||||||||||||||| | |||||||||| |||| ||||||||||    
T  22511062 ttttgtagtgagaaatcatgtaaatcgaaaaatcaagacatcaagtgaaagattgaggatatgaagattgatgttcaatgattcatagatggtttttgaa 22511161  T
Q  128 gacaatacaaagtgaagaaaatt 150  Q
    |||||||| || |||||||||||    
T  22511162 gacaatacgaaatgaagaaaatt 22511184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 17152270 - 17152379
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    |||| ||||||| |||||||| ||||| |||| |||||||||   |||||||||||||||||||||| |||| || |||| |||||||||||||||||||    
T  17152270 ttttttagtaagaaatcatgtaaatcggcaaaacaagacatcgtgtgaaggatcaaggatatgaagaatgaatatgaatggttcttagaaggtttttgaa 17152369  T
Q  128 gacaatacaa 137  Q
    || |||||||    
T  17152370 gataatacaa 17152379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 41 - 155
Target Start/End: Complemental strand, 14922024 - 14921910
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 140  Q
    |||||||| |||||  ||| ||| ||||||  ||||| ||| |||||||||||||||||| |||||| |||||||||||| | || ||||||||||||||    
T  14922024 aatcatgtaaatcggaaaaacaatacatcatgtgaagaatcgaggatatgaagattgaagttcaatggttcttagaaggtatatgtagacaatacaaagt 14921925  T
Q  141 gaagaaaattcattt 155  Q
    |||||||| ||||||    
T  14921924 gaagaaaaatcattt 14921910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 41 - 167
Target Start/End: Original strand, 19541166 - 19541291
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 140  Q
    |||||||| ||||| ||||  |||||||||  ||||||||| ||||||||||||||||||| ||||| |||||| |||| | || |||||||||||||||    
T  19541166 aatcatgtaaatcggcaaaataagacatcaagtgaaggatcgaggatatgaagattgaagaccaatggttcttataagg-tattaaagacaatacaaagt 19541264  T
Q  141 gaagaaaattcatttcaagttcctagg 167  Q
     |||||  |||||||||||||| ||||    
T  19541265 taagaatcttcatttcaagttcatagg 19541291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 56 - 156
Target Start/End: Original strand, 31262142 - 31262241
Alignment:
Q  56 caaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcattt 155  Q
    |||| ||||||| ||||||||| ||| |||||||||||||||||||| |||| ||||||| |||| ||||||||||||| ||  ||||||||||||||||    
T  31262142 caaaacaagacaccacatgaag-atcgaggatatgaagattgaagattaatggttcttagtaggtctttgaagacaatataagttgaagaaaattcattt 31262240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 190 - 293
Target Start/End: Original strand, 9504214 - 9504317
Alignment:
Q  190 cgaaaacgcaagaattcgcacgtgaggggttgcctgatgcgccactgcgcatgggacagtgtttgccattgcctcatgcgcatcctgcacgtcagggatg 289  Q
    ||||||| ||| ||||||||| || |||| | ||| |||||||||||||||||||| |||||||| || ||||||||||||||||||| |  ||||||||    
T  9504214 cgaaaacacaaaaattcgcacatgtggggcttcctcatgcgccactgcgcatgggatagtgtttgtcactgcctcatgcgcatcctgcgccacagggatg 9504313  T
Q  290 cgca 293  Q
    ||||    
T  9504314 cgca 9504317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 190 - 293
Target Start/End: Original strand, 9515580 - 9515683
Alignment:
Q  190 cgaaaacgcaagaattcgcacgtgaggggttgcctgatgcgccactgcgcatgggacagtgtttgccattgcctcatgcgcatcctgcacgtcagggatg 289  Q
    ||||||| ||| ||||||||| || |||| | ||| |||||||||||||||||||| |||||||| || ||||||||||||||||||| |  ||||||||    
T  9515580 cgaaaacacaaaaattcgcacatgtggggcttcctcatgcgccactgcgcatgggatagtgtttgtcactgcctcatgcgcatcctgcgccacagggatg 9515679  T
Q  290 cgca 293  Q
    ||||    
T  9515680 cgca 9515683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 50 - 137
Target Start/End: Original strand, 24047520 - 24047608
Alignment:
Q  50 aatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattct-tagaaggtttttgaagacaatacaa 137  Q
    ||||| |||| ||||||||| |||||||||||||||||||||||| |||||||||||| ||||  | ||||||| ||||||||||||||    
T  24047520 aatcggcaaaacaagacatcccatgaaggatcaaggatatgaagaatgaagatcaatggttctcaaaaaggtttgtgaagacaatacaa 24047608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 43 - 187
Target Start/End: Complemental strand, 34063824 - 34063680
Alignment:
Q  43 tcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtga 142  Q
    |||||| ||||| |||| |||||||||   ||||||||| | |||||||||||| ||  |  ||| || |||||||   |||||||||||||||||||||    
T  34063824 tcatgtaaatcggcaaaacaagacatcgtgtgaaggatcgacgatatgaagatttaattttgatggttattagaagacatttgaagacaatacaaagtga 34063725  T
Q  143 agaaaattcatttcaagttcctaggagttttcagacggaagaacg 187  Q
    ||||||||||||| ||||||| |||  || | |||||||||||||    
T  34063724 agaaaattcatttgaagttccaaggcattgtgagacggaagaacg 34063680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 81 - 162
Target Start/End: Complemental strand, 17884588 - 17884507
Alignment:
Q  81 caaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttc 162  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||| || |||||||  | |||||||||||  |||||||    
T  17884588 caaggatatgaagaatgaagatcattgattcttagaaggtttttgaaaactatacaaaccggagaaaattcatcccaagttc 17884507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 150
Target Start/End: Original strand, 32619746 - 32619863
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||||||  || |||||||| | |||||||| ||||||||||| |||    ||||||||||||||| |||| |||||   |||| ||||||||||||||    
T  32619746 ttttgtagcgagaaatcatgtaattcgacaaatcaagacatcacgtga----tcaaggatatgaagaatgaa-atcaaaagttctaagaaggtttttgaa 32619840  T
Q  128 gacaatacaaagtgaagaaaatt 150  Q
    |||||||||||||||| ||||||    
T  32619841 gacaatacaaagtgaataaaatt 32619863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 134 - 186
Target Start/End: Complemental strand, 19949417 - 19949365
Alignment:
Q  134 acaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaac 186  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  19949417 acaaagtgaagaaaattcatttcaagttcctaggagttttcagatgaaagaac 19949365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 22525744 - 22525685
Alignment:
Q  102 tcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagtt 161  Q
    |||||| |||||||||||| ||||||||||| ||||||||||||||||| ||||||||||    
T  22525744 tcaatggttcttagaaggtatttgaagacaacacaaagtgaagaaaatttatttcaagtt 22525685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 163
Target Start/End: Original strand, 17862539 - 17862661
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 140  Q
    |||||||| ||| | ||||  ||||||||||||||| ||||||||||||||||| |||| |||  || |||||||||  |||||||||||| |||||  |    
T  17862539 aatcatgtaaattggcaaaataagacatcacatgaaagatcaaggatatgaagaatgaaaatcggtggttcttagaatttttttgaagacagtacaagtt 17862638  T
Q  141 gaagaaaattcatttcaagttcc 163  Q
    |  ||||||||||  ||||||||    
T  17862639 ggggaaaattcatcccaagttcc 17862661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 31274131 - 31274205
Alignment:
Q  87 tatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagtt 161  Q
    |||||| ||||||||| |||| |||||||||||| ||||||||||||| ||  ||||||||||||||| ||||||    
T  31274131 tatgaaaattgaagattaatggttcttagaaggtctttgaagacaatataagttgaagaaaattcattccaagtt 31274205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 56 - 132
Target Start/End: Complemental strand, 15454509 - 15454433
Alignment:
Q  56 caaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaa 132  Q
    |||| |||||||||||||||||||||||||||||||||| | ||||| |||| |||||| ||| ||| | |||||||    
T  15454509 caaaacaagacatcacatgaaggatcaaggatatgaagaataaagataaatggttcttaaaagttttctaaagacaa 15454433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 21849039 - 21848963
Alignment:
Q  61 caagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaa 137  Q
    ||||||||||||||||||||||||||||  || | |||| ||||||| |||||| |||||||| ||| |||||||||    
T  21849039 caagacatcacatgaaggatcaaggataataataatgaaaatcaatggttcttaaaaggttttggaacacaatacaa 21848963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 27917976 - 27917916
Alignment:
Q  33 tagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaag 93  Q
    ||||||| |||||||| |||||||||| |||||||||| ||||||||||||||| ||||||    
T  27917976 tagtaagaaatcatgtcaatcgacaaatcaagacatcagatgaaggatcaaggagatgaag 27917916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 56 - 187
Target Start/End: Original strand, 39730591 - 39730722
Alignment:
Q  56 caaaccaagacatcacatgaaggatcaa-ggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatt 154  Q
    |||| ||||||||||||||||||||||| ||||||||||| ||||||  |||  ||||||||||  ||||||||||||||  |  ||  ||||||||||     
T  39730591 caaaacaagacatcacatgaaggatcaagggatatgaaga-tgaagactaatatttcttagaagaattttgaagacaataagagttggggaaaattcatc 39730689  T
Q  155 tcaagttcctaggagttttcagacggaagaacg 187  Q
     |||||||| |||  |||  |||||||||||||    
T  39730690 ccaagttccaaggcatttcaagacggaagaacg 39730722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 15829238 - 15829391
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaag--------- 118  Q
    ||||| ||| || |||||||| |||||||||| ||||||||||| ||||||||||  |||||||| |||||||| ||| | ||| || |||             
T  15829238 ttttgcagtgagaaatcatgtaaatcgacaaatcaagacatcacgtgaaggatcattgatatgaa-attgaagaccaacggttcctataagttttttttt 15829336  T
Q  119 -gtttttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagttt 172  Q
      ||||| |||| |||||||||| ||||||||||||||||| || ||||||||||    
T  15829337 ttttttttaagaaaatacaaagtaaagaaaattcatttcaaatttctaggagttt 15829391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 150
Target Start/End: Complemental strand, 19949467 - 19949433
Alignment:
Q  116 aaggtttttgaagacaatacaaagtgaagaaaatt 150  Q
    |||||| ||||||||||||||||||||||||||||    
T  19949467 aaggttattgaagacaatacaaagtgaagaaaatt 19949433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 8e-58; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 28 - 189
Target Start/End: Complemental strand, 11769992 - 11769831
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||| ||| || |||||||| |||||| ||| |||||||||||||||| |||||| ||||||||||||||||| ||||| |||||||||||||||||||    
T  11769992 ttttgcagtgagaaatcatgtaaatcgaaaaatcaagacatcacatgaatgatcaaagatatgaagattgaagaccaatggttcttagaaggtttttgaa 11769893  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgat 189  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  11769892 gacaatacaaagtgaagaaaattcatttcaagttcctatgagtttccagacggaagaacgat 11769831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 28 - 189
Target Start/End: Complemental strand, 23519766 - 23519606
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||||||| || |||||||| |||||||| | |||||||| || |||||||||||| ||||||| |||||||| ||||| ||||||||||||| |||||    
T  23519766 ttttgtagtgagaaatcatgtaaatcgacacatcaagacattacgtgaaggatcaagaatatgaa-attgaagaccaatggttcttagaaggttgttgaa 23519668  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgat 189  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  23519667 gacaatagaaagtgaagaaaatttatttcaagttcctaggagttttcagacggaagaacgat 23519606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 28 - 197
Target Start/End: Original strand, 26657593 - 26657761
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||||||| |  |||||||| |||||||||| |||||||| |  ||||||||||||| |||||| || |||| |||||  |||||| ||||||||||||    
T  26657593 ttttgtagtgaaaaatcatgtaaatcgacaaatcaagacattaggtgaaggatcaaggctatgaaaatcgaag-tcaatagttcttataaggtttttgaa 26657691  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 197  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  26657692 gacaaaacaaagtgaagaaaattcatttcaagttcctaggagttttcagacgaaagaatgatcgaaaacg 26657761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 28 - 158
Target Start/End: Complemental strand, 25494486 - 25494357
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||||||| || |||||||| |||||||||| ||||||||||||| ||||| |||| |||||||||||||||| ||||| |||||||||||||||||||    
T  25494486 ttttgtagtgagaaatcatgtaaatcgacaaatcaagacatcacattaaggagcaag-atatgaagattgaagaccaatggttcttagaaggtttttgaa 25494388  T
Q  128 gacaatacaaagtgaagaaaattcatttcaa 158  Q
    |||||||||||||||||||||||||||||||    
T  25494387 gacaatacaaagtgaagaaaattcatttcaa 25494357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 28 - 196
Target Start/End: Original strand, 30781877 - 30782044
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaaga-ttgaagatcaatgattcttagaaggtttttga 126  Q
    ||||||||| ||||||||||| ||||  |||| ||||||||||  |||||||||||||||  ||||| ||||||||||| | |||||| |||||| ||||    
T  30781877 ttttgtagtgaggaatcatgtaaatcatcaaatcaagacatcatgtgaaggatcaaggat--gaagaattgaagatcaagggttcttaaaaggttgttga 30781974  T
Q  127 agacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaac 196  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||| |  ||||||||||||||||    
T  30781975 agacaatacaaagtgaagaaaattgatttcaagttcctaggtgttttcaggcaaaagaacgatcgaaaac 30782044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 28 - 185
Target Start/End: Complemental strand, 25727907 - 25727751
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||||||| || |||||||| |||||||||| ||| | |||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||    
T  25727907 ttttgtagtgagaaatcatgtaaatcgacaaatcaatatatcacatgaaggattaaggatatgaagattgaagatcaatggttcttggaaggtttttgaa 25727808  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaa 185  Q
    |||||| |||||||||| |||||  ||| |||||||||| ||||| |||| |||||||    
T  25727807 gacaatccaaagtgaag-aaatttttttgaagttcctagaagtttccagatggaagaa 25727751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 28 - 185
Target Start/End: Complemental strand, 25736315 - 25736159
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||||||| || |||||||| |||||||||| ||| | |||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||    
T  25736315 ttttgtagtgagaaatcatgtaaatcgacaaatcaatatatcacatgaaggattaaggatatgaagattgaagatcaatggttcttggaaggtttttgaa 25736216  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaa 185  Q
    |||||| |||||||||| |||||  ||| |||||||||| ||||| |||| |||||||    
T  25736215 gacaatccaaagtgaag-aaatttttttgaagttcctagaagtttccagatggaagaa 25736159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 40 - 172
Target Start/End: Complemental strand, 18300989 - 18300857
Alignment:
Q  40 gaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaag 139  Q
    ||||||||| ||| |||||| ||||||||||| |||||||||||||||||||||||| || | ||||| |||||||||||||||||||||||||||| ||    
T  18300989 gaatcatgtaaatagacaaatcaagacatcacgtgaaggatcaaggatatgaagattaaataccaatggttcttagaaggtttttgaagacaatacagag 18300890  T
Q  140 tgaagaaaattcatttcaagttcctaggagttt 172  Q
    ||||||||| | ||||||| |||||||||||||    
T  18300889 tgaagaaaaattatttcaaattcctaggagttt 18300857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 23223529 - 23223674
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttt-tga 126  Q
    ||||||||| || |||||||| |||| ||||  ||||||||| |||||||  |||||||||||||||||||| | |||| |||| ||||||||||| |||    
T  23223529 ttttgtagtgagaaatcatgtaaatcaacaagtcaagacatcgcatgaagattcaaggatatgaagattgaaaaccaataattcatagaaggttttttga 23223628  T
Q  127 agacaatacaaagtgaagaaaattcatttcaagttcctaggagttt 172  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  23223629 agacaatacaaagtgaaaaaaattcatttcaagttcctaggagttt 23223674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 28 - 197
Target Start/End: Complemental strand, 25730569 - 25730401
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||||||  || |||||||| |||||||||| ||||| |||||||||||||||||||| ||||||||| |||||||||| ||||| ||||||||||||     
T  25730569 ttttgtagcgagaaatcatgtaaatcgacaaatcaagatatcacatgaaggatcaaggagatgaagatttaagatcaatggttcttggaaggtttttgac 25730470  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 197  Q
    ||||||  |||||||||||||||| ||| || ||||||| ||||| | || |||||||| ||||||||||    
T  25730469 gacaatcgaaagtgaagaaaattc-tttaaaattcctagaagtttacggatggaagaacaatcgaaaacg 25730401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 28 - 173
Target Start/End: Original strand, 30675601 - 30675745
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    |||| |||| || |||||||| ||||| |||   |||||||||  |||||||||||| || ||||||||||| ||||||| |||||||||||||||||||    
T  30675601 ttttatagtgagaaatcatgtaaatcggcaatttaagacatcatgtgaaggatcaagaatgtgaagattgaa-atcaatggttcttagaaggtttttgaa 30675699  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcctaggagtttt 173  Q
    || |||||||||||||||||||||||||||||||||||||||||||    
T  30675700 gataatacaaagtgaagaaaattcatttcaagttcctaggagtttt 30675745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 62 - 197
Target Start/End: Original strand, 50047325 - 50047460
Alignment:
Q  62 aagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagtt 161  Q
    |||| ||||| ||||||||||||| |||||| |||||||||||||| | |||| |||||| |||||||||||||||| |||||||||||||||| |||||    
T  50047325 aagaaatcacgtgaaggatcaagggtatgaatattgaagatcaatggtacttaaaaggttattgaagacaatacaaaatgaagaaaattcattttaagtt 50047424  T
Q  162 cctaggagttttcagacggaagaacgatcgaaaacg 197  Q
    |||||||||||||  || |||||||||| |||||||    
T  50047425 cctaggagttttcgaacagaagaacgatagaaaacg 50047460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 94 - 199
Target Start/End: Complemental strand, 12423847 - 12423742
Alignment:
Q  94 attgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaa 193  Q
    |||||||||||| | ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||| |||    
T  12423847 attgaagatcaaaggttcttagaaggttgttgaagacaatacaaagtgaaggaaattcatttcaagttcctaggagttttcaaacgaaagaacgattgaa 12423748  T
Q  194 aacgca 199  Q
    ||||||    
T  12423747 aacgca 12423742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 50 - 187
Target Start/End: Original strand, 26102195 - 26102332
Alignment:
Q  50 aatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaat 149  Q
    |||||||||| ||||||||||| |||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||  ||| ||||||    
T  26102195 aatcgacaaaacaagacatcacgtgaatgatcaaggatatgaagaatgaagatcaatgatttttagaaggtttttgaagacaatacaagttgaggaaaat 26102294  T
Q  150 tcatttcaagttcctaggagttttcagacggaagaacg 187  Q
    |||| ||||||| | |||| |||  |||| ||||||||    
T  26102295 tcatctcaagtttcaaggaatttcaagactgaagaacg 26102332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 41 - 163
Target Start/End: Complemental strand, 26854305 - 26854183
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 140  Q
    |||||||| || || |||| |||||||| |  ||||||||||| |||||||||||||||| |||||| |||||||||| | |||||||||||||||||||    
T  26854305 aatcatgtaaaccggcaaaacaagacattaagtgaaggatcaatgatatgaagattgaagttcaatggttcttagaagatatttgaagacaatacaaagt 26854206  T
Q  141 gaagaaaattcatttcaagttcc 163  Q
    ||||||||||||||| |||||||    
T  26854205 gaagaaaattcatttgaagttcc 26854183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 73 - 187
Target Start/End: Complemental strand, 52271198 - 52271084
Alignment:
Q  73 tgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagttt 172  Q
    ||||||||| |||||||||||||||||| |||||| | |||||||||| ||||||||||||||||||||||||||||||||||||| |||| |||| ||     
T  52271198 tgaaggatcgaggatatgaagattgaagttcaatggtacttagaaggtatttgaagacaatacaaagtgaagaaaattcatttcaaattccaaggaattg 52271099  T
Q  173 tcagacggaagaacg 187  Q
      |||||||||||||    
T  52271098 caagacggaagaacg 52271084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 77 - 189
Target Start/End: Original strand, 9328333 - 9328444
Alignment:
Q  77 ggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcag 176  Q
    |||||| ||||||||||||||||  |||||  ||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||| ||     
T  9328333 ggatcagggatatgaagattgaat-tcaatcgttcttagaaggtttttgaagacaatactaagtgaagaaaattcagtccaagttcctaggagtttccat 9328431  T
Q  177 acggaagaacgat 189  Q
    | |||||||||||    
T  9328432 atggaagaacgat 9328444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 77 - 193
Target Start/End: Original strand, 9353178 - 9353293
Alignment:
Q  77 ggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcag 176  Q
    |||||| ||||||||||||||||  ||||| |||||||||||||||||||||| ||||| |||||||||||||||| | |||||||||| |||||| ||     
T  9353178 ggatcagggatatgaagattgaat-tcaatcattcttagaaggtttttgaagaaaatactaagtgaagaaaattcagtccaagttcctatgagtttccat 9353276  T
Q  177 acggaagaacgatcgaa 193  Q
    | |||||||||||||||    
T  9353277 atggaagaacgatcgaa 9353293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 61 - 163
Target Start/End: Complemental strand, 19257769 - 19257669
Alignment:
Q  61 caagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagt 160  Q
    |||||||||||||||| |||| ||||||||||||||||| |||||   |||||||||||| ||||||||||||||||||||||||||||| ||||||| |    
T  19257769 caagacatcacatgaaagatcgaggatatgaagattgaacatcaag--ttcttagaaggtctttgaagacaatacaaagtgaagaaaatttatttcaatt 19257672  T
Q  161 tcc 163  Q
    |||    
T  19257671 tcc 19257669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 77 - 190
Target Start/End: Complemental strand, 9252558 - 9252446
Alignment:
Q  77 ggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcag 176  Q
    |||||| ||||||||||||| ||  | |||| || |||||||||||||||||||||||| |||||||||||||||| | |||||||||| ||||||||||    
T  9252558 ggatcagggatatgaagatttaac-tgaatggttattagaaggtttttgaagacaatactaagtgaagaaaattcagtccaagttcctatgagttttcag 9252460  T
Q  177 acggaagaacgatc 190  Q
    |  |||||||||||    
T  9252459 attgaagaacgatc 9252446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 162
Target Start/End: Original strand, 25373907 - 25373996
Alignment:
Q  73 tgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttc 162  Q
    ||||||||| |||||||||||||| |||| ||||| ||||||||||||| || ||||||||||||  |||||||||||||||||||||||    
T  25373907 tgaaggatccaggatatgaagattaaagaccaatggttcttagaaggttgtttaagacaatacaagatgaagaaaattcatttcaagttc 25373996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 31313668 - 31313777
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    |||| ||||||| |||||||| ||| |  ||| ||| ||||||| |||||||| ||| ||||||||| ||||||||||||||||||| ||||||||||||    
T  31313668 ttttttagtaagaaatcatgtaaattggaaaaacaatacatcacgtgaaggattaagaatatgaagaatgaagatcaatgattcttataaggtttttgaa 31313767  T
Q  128 gacaatacaa 137  Q
    ||||||||||    
T  31313768 gacaatacaa 31313777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 41 - 163
Target Start/End: Complemental strand, 15298855 - 15298734
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 140  Q
    |||||||| ||||| |||| ||||| ||||  | ||||||| |||||||||||||| |||||||||| |||||| ||| | ||||||| |||||||| ||    
T  15298855 aatcatgtaaatcggcaaaacaagaaatcatgtaaaggatcgaggatatgaagattcaagatcaatggttcttaaaagttatttgaag-caatacaatgt 15298757  T
Q  141 gaagaaaattcatttcaagttcc 163  Q
    ||| |||||||||||||||||||    
T  15298756 gaataaaattcatttcaagttcc 15298734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 33 - 137
Target Start/End: Complemental strand, 27461175 - 27461070
Alignment:
Q  33 tagtaaggaatcatgttaatcg-acaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagaca 131  Q
    ||||||| |||||||| | ||| | ||| |||||||||||||||| |||| |||||||||||  |||||||||||| |||||| ||||||||||||||||    
T  27461175 tagtaagaaatcatgtaagtcggaaaaaacaagacatcacatgaaagatcgaggatatgaagtatgaagatcaatggttcttaaaaggtttttgaagaca 27461076  T
Q  132 atacaa 137  Q
    ||||||    
T  27461075 atacaa 27461070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 41 - 133
Target Start/End: Complemental strand, 15416959 - 15416866
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaagg-atatgaagattgaagatcaatgattcttagaaggtttttgaagacaat 133  Q
    |||||||| | ||| |||| ||||||| ||||||||||||||||| ||||||||| |||||||||||| |||||| ||||||||| ||||||||    
T  15416959 aatcatgtaattcggcaaagcaagacaccacatgaaggatcaagggatatgaagaatgaagatcaatggttcttataaggtttttaaagacaat 15416866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 62 - 163
Target Start/End: Original strand, 25126630 - 25126731
Alignment:
Q  62 aagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagtt 161  Q
    |||||||||| ||||||||  ||||||||| || |  ||||||||  |||||||||  | |||||| |||||||||| ||||||||||||||||||||||    
T  25126630 aagacatcacgtgaaggattgaggatatgacgactacagatcaatagttcttagaaaatctttgaatacaatacaaaatgaagaaaattcatttcaagtt 25126729  T
Q  162 cc 163  Q
    ||    
T  25126730 cc 25126731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 179
Target Start/End: Complemental strand, 23521727 - 23521566
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggttttt--- 124  Q
    ||||||||| || |||||||| |||||||| | ||||||||||| |||||||| | | ||||||| |||||||| ||||| ||||||||||||| ||       
T  23521727 ttttgtagtgagaaatcatgtaaatcgacacatcaagacatcacgtgaaggataaggaatatgaa-attgaagaccaatggttcttagaaggttcttaga 23521629  T
Q  125 --------gaagacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacg 179  Q
            |||||||||| ||||||||| ||| | || ||||||||||||||||||| |||||    
T  23521628 aggttcttgaagacaatagaaagtgaagtaaaattatatcaagttcctaggagttttaagacg 23521566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 93 - 163
Target Start/End: Original strand, 23505938 - 23506007
Alignment:
Q  93 gattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcc 163  Q
    ||||||||||||||| | ||| ||||   ||||||||||||||||||||||||||||||||||||||||||    
T  23505938 gattgaagatcaatggt-cttggaagacatttgaagacaatacaaagtgaagaaaattcatttcaagttcc 23506007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 121
Target Start/End: Original strand, 34381844 - 34381920
Alignment:
Q  45 atgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtt 121  Q
    |||| |||||||||| ||| ||||||| |||| |||||||||||||||| ||||||||||||| || ||| ||||||    
T  34381844 atgtaaatcgacaaatcaaaacatcacgtgaaagatcaaggatatgaagtttgaagatcaatggttgttataaggtt 34381920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 18795325 - 18795407
Alignment:
Q  56 caaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaagg-tttttgaagacaatacaa 137  Q
    |||| ||||||||||||||| ||||||| |||||||| | ||||||| |||||||||  ||||| ||||| ||||||||||||    
T  18795325 caaaacaagacatcacatgatggatcaaagatatgaaaagtgaagatgaatgattctatgaaggtttttttaagacaatacaa 18795407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 133
Target Start/End: Complemental strand, 31319576 - 31319504
Alignment:
Q  61 caagacatcacatgaaggatcaag-gatatgaagattgaagatcaatgattcttagaaggtttttgaagacaat 133  Q
    ||||||| ||||| |||||||||| |||||||| | |||||||||||| |||||||||| ||||||||||||||    
T  31319576 caagacaccacat-aaggatcaagagatatgaataatgaagatcaatggttcttagaagttttttgaagacaat 31319504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 95 - 195
Target Start/End: Complemental strand, 25665701 - 25665601
Alignment:
Q  95 ttgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaa 194  Q
    |||||| |||||| |||||| ||  | ||| ||||||||||||||||||||||| |||||| ||||||| |||  ||   ||||||||||||||| ||||    
T  25665701 ttgaagttcaatggttcttataaaatatttaaagacaatacaaagtgaagaaaaatcatttgaagttccaaggcattgcaagacggaagaacgattgaaa 25665602  T
Q  195 a 195  Q
    |    
T  25665601 a 25665601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 8247655 - 8247596
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggat 87  Q
    ||||||||| ||||||||||| |||| ||||| ||||||||||| |||| ||||||||||    
T  8247655 ttttgtagtgaggaatcatgtaaatcaacaaatcaagacatcacgtgaaagatcaaggat 8247596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 163
Target Start/End: Original strand, 21548820 - 21548899
Alignment:
Q  84 ggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcc 163  Q
    ||||||||||||||||| | |||| ||||||||||   |||||||| |||||||  |||| ||||||||||| |||||||    
T  21548820 ggatatgaagattgaagctaaatggttcttagaagacatttgaagataatacaagttgaaaaaaattcatttgaagttcc 21548899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 163
Target Start/End: Original strand, 18391232 - 18391334
Alignment:
Q  62 aagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaagg-tttttgaagacaatacaaagtgaagaaaattcatttcaagt 160  Q
    |||||||||||||||| || |||||| | || |  ||||||||||| |||||| |||| ||||| ||||||||||||| |||| |||| | || ||||||    
T  18391232 aagacatcacatgaagaatgaaggatttaaaaaacgaagatcaatggttcttaaaaggtttttttaagacaatacaaaatgaaaaaaaattatctcaagt 18391331  T
Q  161 tcc 163  Q
    |||    
T  18391332 tcc 18391334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 15851163 - 15851110
Alignment:
Q  84 ggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaa 137  Q
    |||||||| || |||||| ||||||| ||||||||||||||||||| |||||||    
T  15851163 ggatatgatgaatgaagaccaatgatacttagaaggtttttgaagaaaatacaa 15851110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 111; Significance: 5e-56; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 28 - 186
Target Start/End: Original strand, 30355433 - 30355591
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    |||||||||||||| ||| || ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||    
T  30355433 ttttgtagtaaggattcacgtaaatcgacaaaccaagacctcacatgaaggatcgaggatatgaagattgaagatcaatcgttcttagaaggtttttgaa 30355532  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaac 186  Q
    ||||||| |||||||| ||||||||||||||||||  |||||||| |||||||||||||    
T  30355533 gacaataaaaagtgaataaaattcatttcaagttcacaggagtttccagacggaagaac 30355591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 28 - 196
Target Start/End: Original strand, 15575041 - 15575208
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaaga-ttgaagatcaatgattcttagaaggtttttga 126  Q
    ||||||||  ||||||||||| |||  ||||| ||||||||||| ||||||||||| |||  ||||| ||||||||||| | ||||||||||||  ||||    
T  15575041 ttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaacgat--gaagaattgaagatcaagggttcttagaaggtcgttga 15575138  T
Q  127 agacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaac 196  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||    
T  15575139 agacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagacggaagaaagatcgaaaac 15575208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 28 - 196
Target Start/End: Complemental strand, 17860446 - 17860279
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||||||| || |||||||| | || ||||| || |||||||| |||||||| ||| ||| ||| |||||||  ||||| ||||||||||||||||| |    
T  17860446 ttttgtagtgagaaatcatgtaattcaacaaatcaggacatcacgtgaaggataaagtataagaa-attgaaggacaatggttcttagaaggtttttgta 17860348  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaac 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||| ||||||    
T  17860347 gacaatacaaagtgaagaaaattcatttcaagttcctaggagtttccagtcgaaagaacgattgaaaac 17860279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 26499832 - 26499712
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 140  Q
    |||||||  ||||| |||| ||||| | ||| |||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26499832 aatcatgcaaatcggcaaaacaagataccacgtgaaagatcgaggatatgaagattgaagatcaatggttcttagaaggtttttgaagacaatacaaagt 26499733  T
Q  141 gaagaaaattcatttcaagtt 161  Q
     ||||||||||||||||||||    
T  26499732 aaagaaaattcatttcaagtt 26499712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 28 - 163
Target Start/End: Complemental strand, 24507440 - 24507306
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||||||| || |||| ||| |||| ||||| ||||||||||| ||||||||  | ||||||||||||||||| ||||| || ||||||| ||| ||||    
T  24507440 ttttgtagtgagaaatcctgtaaatcaacaaatcaagacatcacgtgaaggattgacgatatgaagattgaaga-caatggttgttagaagttttatgaa 24507342  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcc 163  Q
    || |||||||||||||||||||| ||||||||||||    
T  24507341 gaaaatacaaagtgaagaaaatttatttcaagttcc 24507306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 41 - 150
Target Start/End: Complemental strand, 33638490 - 33638381
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 140  Q
    |||||||| ||||| |||| ||| | ||||  ||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||| ||||||||||    
T  33638490 aatcatgtaaatcggcaaaacaatatatcaagtgaaggatcaaggatatgaagattgaagatcaatggttcttataaggtctttgaagataatacaaagt 33638391  T
Q  141 gaagaaaatt 150  Q
    ||| ||||||    
T  33638390 gaataaaatt 33638381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 28 - 171
Target Start/End: Original strand, 15998628 - 15998769
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||||||| ||||||||||| |||   |||| ||||||||||  |||| ||||||||||| |||  ||||||| ||  |  |||||||||||| ||| |    
T  15998628 ttttgtagtgaggaatcatgtaaatgaccaaatcaagacatcatgtgaatgatcaaggataagaa--ttgaagaccatgggctcttagaaggttgttgta 15998725  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcctaggagtt 171  Q
    ||||||||||||||||| ||||||||||||||||||||||||||    
T  15998726 gacaatacaaagtgaagcaaattcatttcaagttcctaggagtt 15998769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 50 - 137
Target Start/End: Complemental strand, 9396583 - 9396496
Alignment:
Q  50 aatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaa 137  Q
    ||||| |||| ||||||||||| |||||||||||||| | ||||| |||||||||| |||||||||||  ||||||||||||||||||    
T  9396583 aatcggcaaaacaagacatcacgtgaaggatcaaggacaagaagaatgaagatcaacgattcttagaaattttttgaagacaatacaa 9396496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 61 - 195
Target Start/End: Original strand, 16439607 - 16439741
Alignment:
Q  61 caagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagt 160  Q
    |||||||||| ||||| ||||| ||||||||||| |||||||||||| ||||||||| | ||||||||| |||||||  |   ||||||||||  ||||     
T  16439607 caagacatcagatgaaagatcagggatatgaagaatgaagatcaatggttcttagaatggttttgaagaaaatacaagttcgggaaaattcatcgcaaga 16439706  T
Q  161 tcctaggagttttcagacggaagaacgatcgaaaa 195  Q
    ||| ||   |||| ||||||||||||| |||||||    
T  16439707 tccaagacattttaagacggaagaacgctcgaaaa 16439741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 85 - 151
Target Start/End: Original strand, 33638259 - 33638325
Alignment:
Q  85 gatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattc 151  Q
    ||||||||||||||||||||||| |||||| ||||| |||||||| ||||||||||||| |||||||    
T  33638259 gatatgaagattgaagatcaatggttcttataaggtctttgaagataatacaaagtgaataaaattc 33638325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 82 - 146
Target Start/End: Original strand, 24618053 - 24618117
Alignment:
Q  82 aaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaa 146  Q
    ||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||  |||||||    
T  24618053 aaggatatgaagattgaagatcaatgattcttagaagatctttaaagacaatacaagttgaagaa 24618117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 28 - 161
Target Start/End: Complemental strand, 16387253 - 16387120
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    |||| ||||||| |||||||| ||||| |||| |||||||| |  ||| ||||||||||||||||| || |||| ||||| | |||| |||| |||| ||    
T  16387253 ttttatagtaagaaatcatgtaaatcggcaaatcaagacattaggtgagggatcaaggatatgaagtttaaagaccaatggtccttaaaaggatttttaa 16387154  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagtt 161  Q
    || |||| |   |||||||||||| |||||||||    
T  16387153 gaaaatataggatgaagaaaattcgtttcaagtt 16387120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 163
Target Start/End: Complemental strand, 9943135 - 9943013
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 140  Q
    |||||||| |||||  ||| |||||||| | || ||||| |||||||||||||| |||| |||||||  ||||| ||||||||| ||||||||  ||  |    
T  9943135 aatcatgtaaatcggaaaaacaagacattaaatcaaggaccaaggatatgaagaatgaaaatcaatggctcttataaggtttttaaagacaatgtaagtt 9943036  T
Q  141 gaagaaaattcatttcaagttcc 163  Q
    |  |||||||||| |||||||||    
T  9943035 ggggaaaattcatctcaagttcc 9943013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 162
Target Start/End: Complemental strand, 14924383 - 14924284
Alignment:
Q  61 caagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagt 160  Q
    |||||||||| |||||| | ||  |||||||| |||||||||||||| ||| | ||| |||||||||||||||||||  |||  ||||||||||||| ||    
T  14924383 caagacatcaaatgaagaaccagagatatgaaaattgaagatcaatggttcatggaatgtttttgaagacaatacaagatga--aaaattcatttcaggt 14924286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 158
Target Start/End: Original strand, 22262458 - 22262587
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||||||| |||| |||||| ||| | |||| ||| ||||||  ||| |||| |||||||||||| ||||| | |||||||| ||| ||||||||||||    
T  22262458 ttttgtagtgaggactcatgtaaattggcaaatcaaaacatcatgtgagggat-aaggatatgaagtttgaacaccaatgatttttaaaaggtttttgaa 22262556  T
Q  128 gacaatacaaagtgaagaaaattcatttcaa 158  Q
    | || | |||  | |||||||||||||||||    
T  22262557 ggcagtgcaagataaagaaaattcatttcaa 22262587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 32930399 - 32930334
Alignment:
Q  72 atgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaa 137  Q
    |||| ||||||| |||||||||  |||| ||||||||||||| |||||||||| ||||||||||||    
T  32930399 atgagggatcaaagatatgaaggatgaaaatcaatgattcttggaaggtttttaaagacaatacaa 32930334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 161
Target Start/End: Complemental strand, 26512732 - 26512644
Alignment:
Q  73 tgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagtt 161  Q
    ||||| |||||||||||||||  |||||||||||| |||||| ||||| | |||| |||||||||  |||  ||||||||| |||||||    
T  26512732 tgaagaatcaaggatatgaaggatgaagatcaatggttcttaaaaggtctgtgaacacaatacaagatgataaaaattcatctcaagtt 26512644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 161
Target Start/End: Complemental strand, 26517848 - 26517760
Alignment:
Q  73 tgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagtt 161  Q
    ||||| |||||||||||||||  |||||||||||| |||||| ||||| | |||| |||||||||  |||  ||||||||| |||||||    
T  26517848 tgaagaatcaaggatatgaaggatgaagatcaatggttcttaaaaggtctgtgaacacaatacaagatgataaaaattcatctcaagtt 26517760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 120
Target Start/End: Complemental strand, 12972354 - 12972291
Alignment:
Q  57 aaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggt 120  Q
    |||||||||||| || |||| |||| | ||||||||||||||||||||||| ||||| ||||||    
T  12972354 aaaccaagacataacgtgaaagatcgatgatatgaagattgaagatcaatggttctttgaaggt 12972291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 153
Target Start/End: Complemental strand, 23419052 - 23418983
Alignment:
Q  84 ggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcat 153  Q
    |||| |||||| |||| ||||||| | | |||||||||||||||| ||||||||  ||||||||||||||    
T  23419052 ggatttgaagaatgaatatcaatgttacgtagaaggtttttgaagtcaatacaagttgaagaaaattcat 23418983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 108; Significance: 3e-54; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 28 - 163
Target Start/End: Complemental strand, 19219209 - 19219074
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||||||| ||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  19219209 ttttgtagtgaggaatcatgtaaatcttcaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatggttcttagaaggtttttgaa 19219110  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcc 163  Q
    |||||||||||||||| |||||||||||||| ||||    
T  19219109 gacaatacaaagtgaataaaattcatttcaaattcc 19219074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 28 - 161
Target Start/End: Complemental strand, 19263905 - 19263769
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggt---tttt 124  Q
    ||||||||||||||||||||  ||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||   ||||    
T  19263905 ttttgtagtaaggaatcatggaaatcgtcaaatcaagtcatcacatgaaggatcaaggatatgaagattgaagatcaatggttcatagaaggtttttttt 19263806  T
Q  125 gaagacaatacaaagtgaagaaaattcatttcaagtt 161  Q
     ||||||||||||||||||||||||||||||||||||    
T  19263805 taagacaatacaaagtgaagaaaattcatttcaagtt 19263769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 28 - 197
Target Start/End: Original strand, 10341903 - 10342072
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    |||||| || || |||||||| |||| ||||| | | ||||||  |||||||| |||||||  |||||||||||||| || |||||||||||||||||||    
T  10341903 ttttgttgtgagaaatcatgtaaatcaacaaatccaaacatcaagtgaaggattaaggatagaaagattgaagatcagtggttcttagaaggtttttgaa 10342002  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 197  Q
    |||||||||||||||  |||| |||||||||||||||||||||||  |||||||||||||||||||||||    
T  10342003 gacaatacaaagtgagaaaaactcatttcaagttcctaggagtttctagacggaagaacgatcgaaaacg 10342072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 28 - 197
Target Start/End: Original strand, 16970578 - 16970746
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    |||||||||| |||||||||| |||||||||| ||||||||||  ||||||||||||||||||||| ||||||| ||| | |||||||||||||||||||    
T  16970578 ttttgtagtagggaatcatgtaaatcgacaaatcaagacatcatgtgaaggatcaaggatatgaagtttgaagaccaacggttcttagaaggtttttgaa 16970677  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 197  Q
    || |||||||  ||||||||||| | || |||||||||| ||||| |||||  |||||||||||||||||    
T  16970678 gaaaatacaagatgaagaaaattta-ttgaagttcctagcagtttccagacaaaagaacgatcgaaaacg 16970746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 28 - 195
Target Start/End: Original strand, 25883220 - 25883386
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaaga-ttgaagatcaatgattcttagaaggtttttga 126  Q
    |||| |||| |||||||||||  |||  |||| |||||||||   | |||||||||||||  ||||| ||||||||||| | ||||||||||||| ||||    
T  25883220 ttttatagtgaggaatcatgtacatcatcaaatcaagacatcttgttaaggatcaaggat--gaagaattgaagatcaagggttcttagaaggttgttga 25883317  T
Q  127 agacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaa 195  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  25883318 agacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacgaaagaacaatcgaaaa 25883386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 28 - 153
Target Start/End: Complemental strand, 25919469 - 25919345
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||    
T  25919469 ttttgtagtgaggaatcatgtaaatcgacaaaccaagatatcacatgaaggatcaaggatatgaagattgaagatcaacgatttttagaa-gtttttgaa 25919371  T
Q  128 gacaatacaaagtgaagaaaattcat 153  Q
    || ||| |||||||| ||||||||||    
T  25919370 gataatgcaaagtgacgaaaattcat 25919345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 28 - 197
Target Start/End: Original strand, 27415285 - 27415452
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    |||||||||||| |||||||| ||| ||| || ||||||||||||| |||||||||||||| | | |||||||| || |  ||||||||| ||||||| |    
T  27415285 ttttgtagtaagaaatcatgtaaatagaccaatcaagacatcacataaaggatcaaggataagga-attgaagaccattagttcttagaatgtttttgga 27415383  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 197  Q
    |||| || ||||||||||||||||||||||| |||||||||||||  ||||| |||||||||||||||||    
T  27415384 gaca-taaaaagtgaagaaaattcatttcaacttcctaggagtttcaagacgaaagaacgatcgaaaacg 27415452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 97 - 197
Target Start/End: Original strand, 11521350 - 11521450
Alignment:
Q  97 gaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaac 196  Q
    ||||||||| | || |||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11521350 gaagatcaagggttgttagaaggttgttgaagataatacaaagcgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaac 11521449  T
Q  197 g 197  Q
    |    
T  11521450 g 11521450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 56 - 189
Target Start/End: Complemental strand, 1475249 - 1475117
Alignment:
Q  56 caaaccaagacatcacatgaaggatcaaggatatgaaga-ttgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatt 154  Q
    |||| ||||||||||  |||||||||||||||  ||||| |||||||||||   ||||||||||||| ||||||| |||||||||||||||||||| |||    
T  1475249 caaatcaagacatcatgtgaaggatcaaggat--gaagagttgaagatcaagagttcttagaaggttattgaagataatacaaagtgaagaaaatttatt 1475152  T
Q  155 tcaagttcctaggagttttcagacggaagaacgat 189  Q
    ||||||||||||||||||||||||| |||||||||    
T  1475151 tcaagttcctaggagttttcagacgaaagaacgat 1475117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 28 - 197
Target Start/End: Original strand, 18065913 - 18066082
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggttttt-ga 126  Q
    |||||||||||| |||||||| ||| |||||| ||||||||||||| ||||||||| || | | | ||| |||| ||||| ||||||||| |||||| ||    
T  18065913 ttttgtagtaagaaatcatgtaaatagacaaatcaagacatcacataaaggatcaatgacaagga-attaaagaccaatggttcttagaaagttttttga 18066011  T
Q  127 agacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 197  Q
    ||| |||||||||||||||||||||||||||| ||||||||||||| || ||  ||||||| |||| ||||    
T  18066012 agaaaatacaaagtgaagaaaattcatttcaacttcctaggagtttccaaaccaaagaacgctcgagaacg 18066082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 41 - 163
Target Start/End: Complemental strand, 19543109 - 19542987
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 140  Q
    ||||||||||||||  ||  ||||||||||||||||||||| || || | |||||||||  |||||  |||||||||||| |||||||||||||||||||    
T  19543109 aatcatgttaatcgggaacacaagacatcacatgaaggatcgagaatgtaaagattgaatttcaatagttcttagaaggtatttgaagacaatacaaagt 19543010  T
Q  141 gaagaaaattcatttcaagttcc 163  Q
    |||||||||||||||||||||||    
T  19543009 gaagaaaattcatttcaagttcc 19542987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 28 - 197
Target Start/End: Complemental strand, 33914565 - 33914397
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||||||| || |||||||| ||||||| || ||||||||||| ||||||||||||||||||||| |||||  |||||| || | |||||  |||||||    
T  33914565 ttttgtagtgagaaatcatgtaaatcgacgaatcaagacatcacgtgaaggatcaaggatatgaaggttgaa-ttcaatggttttaagaagaattttgaa 33914467  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 197  Q
    || ||| |||||| | |||||||||||||| | || || |||||| || |||||||||||||||||||||    
T  33914466 gataattcaaagtaaggaaaattcatttcaggctcttatgagtttccatacggaagaacgatcgaaaacg 33914397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 28 - 197
Target Start/End: Original strand, 12573407 - 12573575
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaaga-ttgaagatcaatgattcttagaaggtttttga 126  Q
    ||||||||| ||||||||||| |||| |||||  ||||||| || ||||||||||   ||  ||||| ||||||||||| | || |||||||||| ||||    
T  12573407 ttttgtagtgaggaatcatgtaaatcaacaaatgaagacattacgtgaaggatcaccaat--gaagaattgaagatcaaggtttgttagaaggttgttga 12573504  T
Q  127 agacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 197  Q
    |||||||||| ||||||||||||| ||||||||||| ||| | |||||||||||| ||  |||||||||||    
T  12573505 agacaatacacagtgaagaaaatttatttcaagttcatagaaattttcagacggaggattgatcgaaaacg 12573575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 28 - 197
Target Start/End: Original strand, 13549871 - 13550039
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaaga-ttgaagatcaatgattcttagaaggtttttga 126  Q
    ||||||||| ||||||||||| |||| |||||  ||||||| || ||||||||||   ||  ||||| ||||||||||| | || |||||||||| ||||    
T  13549871 ttttgtagtgaggaatcatgtaaatcaacaaatgaagacattacgtgaaggatcaccaat--gaagaattgaagatcaaggtttgttagaaggttgttga 13549968  T
Q  127 agacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 197  Q
    |||||||||| ||||||||||||| ||||||||||| ||| | |||||||||||| ||  |||||||||||    
T  13549969 agacaatacacagtgaagaaaatttatttcaagttcatagaaattttcagacggaggattgatcgaaaacg 13550039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 41 - 168
Target Start/End: Complemental strand, 23908256 - 23908129
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 140  Q
    |||||||| || || |||| ||||||||| |||||||||||||| ||||||||||| |||||||||| || |||||| |||||||||||||||||||| |    
T  23908256 aatcatgtaaagcggcaaagcaagacatctcatgaaggatcaagaatatgaagatttaagatcaatggtttttagaaagtttttgaagacaatacaaatt 23908157  T
Q  141 gaagaaaattcatttcaagttcctagga 168  Q
    |  ||||||||||| ||| |||| ||||    
T  23908156 ggggaaaattcattccaaattccaagga 23908129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 61 - 163
Target Start/End: Original strand, 18474319 - 18474421
Alignment:
Q  61 caagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagt 160  Q
    |||||||| |||||||||||| | ||| | |||||||||  |||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  18474319 caagacattacatgaaggatcgaagatgtaaagattgaatttcaatggtacttagaaggtatttgaagacaatacaaagtgaagaaaattcatttcaagt 18474418  T
Q  161 tcc 163  Q
    |||    
T  18474419 tcc 18474421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 28 - 145
Target Start/End: Original strand, 28422569 - 28422685
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||||||| || ||||||||  ||||||||| ||| ||||||| ||||||||  |||||||||||||||||| ||||||| | ||||||||| ||||||    
T  28422569 ttttgtagtgagaaatcatgtagatcgacaaatcaatacatcacgtgaaggattgaggatatgaagattgaagttcaatga-tgttagaaggtatttgaa 28422667  T
Q  128 gacaatacaaagtgaaga 145  Q
    ||||||||||||||||||    
T  28422668 gacaatacaaagtgaaga 28422685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 28 - 148
Target Start/End: Original strand, 11474963 - 11475083
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    |||| |||| || |||||||| ||||| |||| ||||||||||||||||||||| | ||||||| |||| ||||| |||| |||||||||| | ||||||    
T  11474963 ttttttagtgagaaatcatgtaaatcggcaaaacaagacatcacatgaaggatcgaagatatgaggattcaagataaatggttcttagaagatatttgaa 11475062  T
Q  128 gacaatacaaagtgaagaaaa 148  Q
    |||||||||||||||| ||||    
T  11475063 gacaatacaaagtgaaaaaaa 11475083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 28 - 196
Target Start/End: Original strand, 21017994 - 21018161
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||||| | || |||||||| | || ||||| |||||||| || ||||||||||| |||||||| |||||||| ||||| ||  || ||  ||||||||    
T  21017994 ttttgtattgagaaatcatgtaattcaacaaatcaagacattacgtgaaggatcaatgatatgaa-attgaagaccaatggtttctataacttttttgaa 21018092  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaac 196  Q
    || |||||||| ||||| ||||||||||||||||||||||| ||| || | |||||||||||| |||||    
T  21018093 gataatacaaaatgaaggaaattcatttcaagttcctaggaatttacaaatggaagaacgatcaaaaac 21018161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 163
Target Start/End: Complemental strand, 5632540 - 5632406
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||||||| || |||||||| ||||||||||||||||||||||||| || ||  |  |||| ||||||||||| ||| | |||||| ||||| ||||||    
T  5632540 ttttgtagtgagaaatcatgtaaatcgacaaaccaagacatcacatggagaattgataatataaagattgaaga-caacggttcttataaggtatttgaa 5632442  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcc 163  Q
    || |||| ||| ||||||||||||||||||||||||    
T  5632441 gataataaaaattgaagaaaattcatttcaagttcc 5632406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 61 - 163
Target Start/End: Complemental strand, 21829098 - 21828996
Alignment:
Q  61 caagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagt 160  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||| | |||||| ||||||||||||| ||  | ||||| |||||||| ||||    
T  21829098 caagacatcacatgaagtatcaaggatatgaagattgaagatcaatggttcatcgaaggtctttgaagacaatataagttaaagaatattcattttaagt 21828999  T
Q  161 tcc 163  Q
    |||    
T  21828998 tcc 21828996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 80 - 195
Target Start/End: Complemental strand, 2729571 - 2729454
Alignment:
Q  80 tcaaggatatgaagattgaagatcaatgattcttagaaggtttttg--aagacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcaga 177  Q
    ||||||||||||| |||||||||||| || ||||| |||||||||   |||||||||||||||||| |||| ||||||||||||| ||||||  || |||    
T  2729571 tcaaggatatgaatattgaagatcaacgactcttaaaaggttttttttaagacaatacaaagtgaataaaaatcatttcaagttcgtaggagaatttaga 2729472  T
Q  178 cggaagaacgatcgaaaa 195  Q
     | |||||||||||||||    
T  2729471 tgcaagaacgatcgaaaa 2729454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 38 - 163
Target Start/End: Complemental strand, 8402540 - 8402414
Alignment:
Q  38 aggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaa-ggtttttgaagacaataca 136  Q
    ||||||| ||| |||||| | | ||||||||||  ||||||||| ||||||||||||||||||| | ||| ||||| ||| ||| |||||||| |||| |    
T  8402540 aggaatcgtgtaaatcgatagatcaagacatcaagtgaaggatcgaggatatgaagattgaagaactatggttcttcgaaaggtatttgaagaaaatata 8402441  T
Q  137 aagtgaagaaaattcatttcaagttcc 163  Q
    |||||||||| ||||||||||||||||    
T  8402440 aagtgaagaacattcatttcaagttcc 8402414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 41 - 153
Target Start/End: Original strand, 26418849 - 26418961
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 140  Q
    |||||||| |||||  |||  |||||||| |||||||||||||||||||||||||| |||||  ||| |||||||||||||||| |||| |||||||| |    
T  26418849 aatcatgtaaatcggaaaaataagacatcgcatgaaggatcaaggatatgaagattaaagattgatggttcttagaaggtttttaaagaaaatacaaatt 26418948  T
Q  141 gaagaaaattcat 153  Q
    |  ||||||||||    
T  26418949 ggggaaaattcat 26418961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 25188906 - 25188983
Alignment:
Q  61 caagacatcacatgaaggatcaagga-tatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaa 137  Q
    |||||||||||| ||||||||||||| |||||||| |||| ||||||| ||||||  |||||||| ||||||||||||    
T  25188906 caagacatcacaagaaggatcaaggaatatgaagaatgaatatcaatggttcttaagaggttttttaagacaatacaa 25188983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 197
Target Start/End: Original strand, 13911407 - 13911541
Alignment:
Q  61 caagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagt 160  Q
    |||||||||  ||||||||||||||||||||||||| ||  | |||| ||||||||||  |||| |||||||||| |  | ||| |||||||||||| ||    
T  13911407 caagacatcttatgaaggatcaaggatatgaagatt-aaattaaatggttcttagaagaattttcaagacaatacgatctaaag-aaattcatttcatgt 13911504  T
Q  161 tcctaggagttttcagacggaagaacgatcgaaaacg 197  Q
    ||| |||||||| || | |||||||| || |||||||    
T  13911505 tccaaggagtttccaaatggaagaacaattgaaaacg 13911541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 73 - 159
Target Start/End: Complemental strand, 30493218 - 30493132
Alignment:
Q  73 tgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaag 159  Q
    ||||||||| | |||||||||||| ||||| || | ||||||||||   ||||||||| ||| ||||||||||||||||||| ||||    
T  30493218 tgaaggatcgaagatatgaagattaaagattaacggttcttagaagacatttgaagacgatataaagtgaagaaaattcattgcaag 30493132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 111
Target Start/End: Original strand, 33577866 - 33577934
Alignment:
Q  44 catgttaatcgacaaaccaagacatcacatgaaggatcaagg-atatgaagattgaagatcaatgattc 111  Q
    ||||| ||||| ||||  |||||||||||||||||||||||| ||||||||| ||||||| ||||||||    
T  33577866 catgtaaatcggcaaagtaagacatcacatgaaggatcaaggtatatgaagaatgaagataaatgattc 33577934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 26297876 - 26297934
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaa 99  Q
    |||||||| ||||| |||| ||||||||||  ||||||||| |||||||||||||||||    
T  26297876 aatcatgtaaatcggcaaaacaagacatcaagtgaaggatcgaggatatgaagattgaa 26297934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 226 - 299
Target Start/End: Complemental strand, 19263693 - 19263620
Alignment:
Q  226 atgcgccactgcgcatgggacagtgtttgccattgcctcatgcgcatcctgcacgtcagggatgcgcaactgcg 299  Q
    |||| |||||| |||||||| | ||||||||||| ||||||||||| |||||||  |||| |||||||| ||||    
T  19263693 atgcaccactgtgcatgggaaaatgtttgccattacctcatgcgcaccctgcaccccaggtatgcgcaattgcg 19263620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 148
Target Start/End: Complemental strand, 26387810 - 26387723
Alignment:
Q  61 caagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaa 148  Q
    ||||||||||  ||||||||||| |||||||| ||||||||| |||| ||||| | ||   ||| |||| ||||||||||||| ||||    
T  26387810 caagacatcaagtgaaggatcaaagatatgaatattgaagattaatggttcttgggagacatttaaagagaatacaaagtgaaaaaaa 26387723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 26797233 - 26797189
Alignment:
Q  42 atcatgttaatcgacaaaccaagacatcacatgaaggatcaagga 86  Q
    ||||||| |||||||||| ||||||||||  ||||||||||||||    
T  26797233 atcatgtaaatcgacaaaacaagacatcaagtgaaggatcaagga 26797189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 101; Significance: 4e-50; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 21514 - 21658
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||| ||| ||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||    
T  21514 ttttgcagtgaggaatcatgtaaatcgacaaaccaagacattacatgaaggatcaatgatatgaagattgaagatcaatggttcttagaaggtttttaaa 21613  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttt 172  Q
    ||||||||||||| ||||| ||||||||||||||  |||||||||    
T  21614 gacaatacaaagttaagaatattcatttcaagtttataggagttt 21658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 41 - 189
Target Start/End: Original strand, 6325 - 6472
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 140  Q
    |||||||| |||||||||| ||||||||||| |||||||||||||||||||| |||||||| ||||| ||| |||||| |||||||||| ||||||||||    
T  6325 aatcatgtaaatcgacaaatcaagacatcacgtgaaggatcaaggatatgaa-attgaagaccaatggttcctagaagatttttgaagaaaatacaaagt 6423  T
Q  141 gaagaaaattcatttcaagttcctaggagttttcagacggaagaacgat 189  Q
    |||||||| ||| |||||||||||||||||||  ||| |||| ||||||    
T  6424 gaagaaaaatcaattcaagttcctaggagtttctagatggaaaaacgat 6472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 99; Significance: 7e-49; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 30 - 196
Target Start/End: Complemental strand, 5765 - 5600
Alignment:
Q  30 ttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaaga 129  Q
    ||||||| || |||||||| ||| ||||||  |||||||||||||||||||| |||||||||||||||||  |||||| |||||||||||| ||| ||||    
T  5765 ttgtagtgagaaatcatgtaaattgacaaataaagacatcacatgaaggatcgaggatatgaagattgaat-tcaatggttcttagaaggtctttaaaga 5667  T
Q  130 caatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaac 196  Q
     |||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||    
T  5666 aaatacaaagtgaagaaaattcaattcaagtttgtaggagttttcagacggaagaacgatcgaaaac 5600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 32 - 186
Target Start/End: Complemental strand, 26949 - 26795
Alignment:
Q  32 gtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagaca 131  Q
    ||||| || |||||||| ||||||||||  |||||||||| |||| ||||||||||||||| ||||||| |||||| ||||||||| ||| |||||||||    
T  26949 gtagtgagaaatcatgtaaatcgacaaattaagacatcacgtgaaagatcaaggatatgaaaattgaagttcaatggttcttagaaagttcttgaagaca 26850  T
Q  132 atacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaac 186  Q
    |||||||||||||||||||| |||||||||| ||||||||||||| | |||||||    
T  26849 atacaaagtgaagaaaattcgtttcaagttcataggagttttcaggctgaagaac 26795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 86; Significance: 4e-41; HSPs: 3)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 28 - 197
Target Start/End: Complemental strand, 8707 - 8538
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||||||| ||||||||||| |||||||||| |||||||| | ||||||||||||||| || ||| || ||||  |||  | |||| ||||||||||||    
T  8707 ttttgtagtgaggaatcatgtaaatcgacaaatcaagacataaaatgaaggatcaaggaaataaagtttaaagacaaatattccttaaaaggtttttgaa 8608  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaacg 197  Q
    ||||||||||  ||||| ||||||||||| ||||||||||| |||||| |||||||||||||||||||||    
T  8607 gacaatacaagatgaaggaaattcatttcgagttcctaggaattttcaaacggaagaacgatcgaaaacg 8538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 79 - 194
Target Start/End: Complemental strand, 11746 - 11631
Alignment:
Q  79 atcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagac 178  Q
    ||||||||||| |||| |||| || |||  |||||||||||||||||||| |||| |||  ||| |||| |||||||| ||||||||||| ||| |||||    
T  11746 atcaaggatattaagaatgaatataaatagttcttagaaggtttttgaagtcaatgcaagatgacgaaagttcatttcgagttcctaggaatttccagac 11647  T
Q  179 ggaagaacgatcgaaa 194  Q
    ||||||||||||||||    
T  11646 ggaagaacgatcgaaa 11631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 13069 - 13013
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaag 84  Q
    ||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||    
T  13069 ttttgtagtgaggaatcatgtaaatcgacaaatcaagacatcacatgaaggatcaag 13013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 61 - 197
Target Start/End: Complemental strand, 22578 - 22443
Alignment:
Q  61 caagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagt 160  Q
    ||||||||||| ||||| |||||||||||||||| ||||| |||||| ||| |||||||||||| |||||||||||| ||||||||||||||||||||||    
T  22578 caagacatcacgtgaagaatcaaggatatgaagaatgaag-tcaatggttcatagaaggttttttaagacaatacaaggtgaagaaaattcatttcaagt 22480  T
Q  161 tcctaggagttttcagacggaagaacgatcgaaaacg 197  Q
    |||||||| ||| |||| ||||||||||| |||||||    
T  22479 tcctaggattttccagagggaagaacgattgaaaacg 22443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 28 - 163
Target Start/End: Complemental strand, 228184 - 228050
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    |||| |||| || |||||||| |||||||||| ||||||||||| ||||||||| ||  |||||| |||||||| ||||| |||||||||||| ||||||    
T  228184 ttttatagtgagaaatcatgtaaatcgacaaatcaagacatcacgtgaaggatcgagtgtatgaatattgaaga-caatggttcttagaaggtatttgaa 228086  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcc 163  Q
    ||||||||||||||||||||||||||||||||||||    
T  228085 gacaatacaaagtgaagaaaattcatttcaagttcc 228050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 77; Significance: 9e-36; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 92 - 196
Target Start/End: Original strand, 7799 - 7903
Alignment:
Q  92 agattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcg 191  Q
    |||||||||  ||||| ||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  7799 agattgaaggccaatggttcttagaaggttgttgaagacagtacaaagtcaagaaaattcatttcaagttcctaggagttttcagacggaagaatgatcg 7898  T
Q  192 aaaac 196  Q
    |||||    
T  7899 aaaac 7903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 41 - 160
Target Start/End: Complemental strand, 11683 - 11564
Alignment:
Q  41 aatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 140  Q
    |||||||| |||||||||| ||||||||||  | ||||||  || || ||||||||||| |||||||||||||| ||||| |||||||||||||||||||    
T  11683 aatcatgtaaatcgacaaaacaagacatcaagttaaggattgagaatttgaagattgaatatcaatgattcttataaggtatttgaagacaatacaaagt 11584  T
Q  141 gaagaaaattcatttcaagt 160  Q
    ||||||||||||||||||||    
T  11583 gaagaaaattcatttcaagt 11564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 28 - 163
Target Start/End: Original strand, 12361 - 12495
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||||||| || |||||||| |||||||||| ||||||||||| ||||||||  | ||||||||||| ||||| ||||| || ||||||| ||| ||||    
T  12361 ttttgtagtgagaaatcatgtaaatcgacaaatcaagacatcacgtgaaggattgacgatatgaagatcgaaga-caatggttgttagaagttttatgaa 12459  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcc 163  Q
    || |||||||||||||||||||| ||||||||||||    
T  12460 gaaaatacaaagtgaagaaaatttatttcaagttcc 12495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 28 - 163
Target Start/End: Original strand, 1925 - 2059
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||||||| || |||| ||| |||| ||||| ||||||||||| ||||||||  | ||||||||||||||||| ||||| || ||||||| ||| ||||    
T  1925 ttttgtagtgagaaatcctgtaaatcaacaaatcaagacatcacgtgaaggattgacgatatgaagattgaaga-caatggttgttagaagttttatgaa 2023  T
Q  128 gacaatacaaagtgaagaaaattcatttcaagttcc 163  Q
    || |||||||||||||||||||| ||||||||||||    
T  2024 gaaaatacaaagtgaagaaaatttatttcaagttcc 2059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1149 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold1149
Description:

Target: scaffold1149; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 81 - 163
Target Start/End: Original strand, 1957 - 2038
Alignment:
Q  81 caaggatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcc 163  Q
    ||||||||| || ||| |||| ||||| |||||| | ||||||||||||||||||||||| ||||||||||||||||||||||    
T  1957 caaggatataaatattcaaga-caatggttcttatatggtttttgaagacaatacaaagtaaagaaaattcatttcaagttcc 2038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 155
Target Start/End: Original strand, 447093 - 447219
Alignment:
Q  28 ttttgtagtaaggaatcatgttaatcgacaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatgattcttagaaggtttttgaa 127  Q
    ||||| ||| ||||||||||| ||||   ||| ||||||||||  |||||||||||||||   || ||||||||||||   ||||||  |||||  ||||    
T  447093 ttttgaagtgaggaatcatgtaaatcattaaatcaagacatcatgtgaaggatcaaggatgaaaa-attgaagatcaaaagttcttaacaggttactgaa 447191  T
Q  128 gacaatacaaagtgaagaaaattcattt 155  Q
    ||||||||||||||||||||||| ||||    
T  447192 gacaatacaaagtgaagaaaattgattt 447219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 163
Target Start/End: Original strand, 2684 - 2751
Alignment:
Q  96 tgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcc 163  Q
    |||||||||||| |||||| |||   ||||||||||||||| ||||||||||| |||||||| |||||    
T  2684 tgaagatcaatggttcttataagacatttgaagacaatacagagtgaagaaaactcatttcatgttcc 2751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 163
Target Start/End: Original strand, 58898 - 59000
Alignment:
Q  64 gacatcacatgaaggatcaaggatatgaagattgaag----atcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaag 159  Q
    |||||||||||||||||| || |||||||||||||||    ||  ||| |||||| ||  | |||||||||||| |||| ||||| |||||||||| |||    
T  58898 gacatcacatgaaggatcgagaatatgaagattgaagtttaatatatggttcttaaaatatatttgaagacaatgcaaaatgaag-aaattcatttaaag 58996  T
Q  160 ttcc 163  Q
    ||||    
T  58997 ttcc 59000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1026 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1026
Description:

Target: scaffold1026; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 155
Target Start/End: Complemental strand, 1734 - 1701
Alignment:
Q  122 tttgaagacaatacaaagtgaagaaaattcattt 155  Q
    ||||| ||||||||||||||||||||||||||||    
T  1734 tttgatgacaatacaaagtgaagaaaattcattt 1701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0836 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0836
Description:

Target: scaffold0836; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 155
Target Start/End: Original strand, 2818 - 2851
Alignment:
Q  122 tttgaagacaatacaaagtgaagaaaattcattt 155  Q
    ||||| ||||||||||||||||||||||||||||    
T  2818 tttgatgacaatacaaagtgaagaaaattcattt 2851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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