View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8606A_low_133 (Length: 270)
Name: NF8606A_low_133
Description: NF8606A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8606A_low_133 |
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Alignment Details
Target: chr4 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 263
Target Start/End: Complemental strand, 40586367 - 40586099
Alignment:
| Q |
1 |
ttctccctcttgaatgaatcttttactatatttcttccttttccaggagttgaaaaaatgaatggaagtgctttgttctgtttgtagaatttggcacaga |
100 |
Q |
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| T |
40586367 |
ttctccctcttgaatgaatcttttactatatttcttccttttccaggagttgaaaaaatggatggaagtgctttgttctgtttgtagaatttggcacaga |
40586268 |
T |
|
| Q |
101 |
aaaataatactcttgacttagttattttataatgccagttccacttgctccttatccaactccacctccagctcctgctccagc------tccatataca |
194 |
Q |
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||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
40586267 |
aaaataatacttttgacttagttcttttataatgccagttccacttgctccttatccaactccacctccagctcctgctccagctccagctccatataca |
40586168 |
T |
|
| Q |
195 |
acacctccaacaaatggtatcttaacctttctttttctctgtgcttgatttcctcattgatgcatgttc |
263 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40586167 |
acacctccaacaaatggtatcttaacctttctttttctctgtgcttgatttcctcattgatgcatgttc |
40586099 |
T |
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